Miyakogusa Predicted Gene

Lj1g3v1287010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1287010.1 Non Chatacterized Hit- tr|B9WL93|B9WL93_CANDC
Autophagy-related protein, putative OS=Candida
dublini,28.41,4e-16,seg,NULL; ATG13,Autophagy-related protein
13,CUFF.27069.1
         (624 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18770.1 | Symbols:  | Autophagy-related protein 13 | chr3:64...   300   2e-81
AT3G49590.1 | Symbols:  | Autophagy-related protein 13 | chr3:18...   135   7e-32
AT3G49590.2 | Symbols:  | Autophagy-related protein 13 | chr3:18...   135   7e-32
AT3G49590.3 | Symbols:  | Autophagy-related protein 13 | chr3:18...   135   8e-32

>AT3G18770.1 | Symbols:  | Autophagy-related protein 13 |
           chr3:6460026-6462510 REVERSE LENGTH=625
          Length = 625

 Score =  300 bits (768), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 241/626 (38%), Positives = 310/626 (49%), Gaps = 47/626 (7%)

Query: 7   EAAKLEQIITEFFAKSLHIILESRA---ISAXXXXXXXXXXXXXXXXXXXXVRPRDKWFN 63
           E AK EQII EFFAKSLHIILESR     S                     VRPRDKWFN
Sbjct: 14  EGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGEQMICSPSSSSSSSSSVRPRDKWFN 73

Query: 64  LALRDCPAALENTELWRHGNMDPIVVDVVLVQRDQTXXXXXXXXXXXXXXXKERYPFCWN 123
           LALR+CPAALE+ ++ R  +++P+VVDVVLV R                  K+ Y   WN
Sbjct: 74  LALRECPAALESFDIGRRSSLEPLVVDVVLVVRPLVGDQSGKRELIRNFSGKD-YQSGWN 132

Query: 124 TMMDXXXXXXXXXXXXXXXXXXXQYESRKPXXXXXXXXXXXXXXXLHALYKKSTLLLRSL 183
           +  D                   QY++RK                L  +YKK+TLLLRSL
Sbjct: 133 S--DQDELGCETKNEQIIERWVVQYDNRKIRESVTTSSRRSSSNKLQVMYKKATLLLRSL 190

Query: 184 YATVRLLPAYKIFRELNSNGKICAFTLAHRVSTFVEPFTSKEEAKMLKFGFTPVDTSSGR 243
           +  VRLLPAYKIFRELNS+G+I  F L  RV + VEPFT KEEA+M KF FTPV+T  GR
Sbjct: 191 FVMVRLLPAYKIFRELNSSGQIFKFKLVPRVPSIVEPFTRKEEAEMQKFSFTPVETICGR 250

Query: 244 LCLSVMYCPSVSDVSSEPSTPMSPQVITDYVGSPMADPLRRYPSLPVARVXXXXXXXXXX 303
           LCLSV+Y  S+SDVS E STPMSP  ITDYVGSP+ADPL+R+PSLP++            
Sbjct: 251 LCLSVLY-RSLSDVSCEHSTPMSPTFITDYVGSPLADPLKRFPSLPLS----YGSPPLLP 305

Query: 304 XXXXXXXXYDHCRAXXXXXXXXXXXTYSESNTSVSLASFHCYPPNSLPPHPSGMSLLHKK 363
                   +D  +A           T S+S+   +L S  C     LPPHPS +    +K
Sbjct: 306 FQRRHSWSFDRYKASPPSVSCSPSPTRSDSH---ALVSHPCS--RHLPPHPSDIPTGRRK 360

Query: 364 NTNFDDYNXXXXXXXXXXXXXXXXIYNLGSLASKALLRSESAPVCIPNTKDSDSPGYTDR 423
            +  ++Y+                    G      + R+ESAPV IP      +P +  +
Sbjct: 361 ESYPEEYSPCQDFSPPPSPSAPKHAVPRG------ITRTESAPVRIP------APTFQSK 408

Query: 424 RNLPPSSPR---------RGLRNV--IQTCTTTEKLFSLGKDESQKYSGAKIVANSLPQI 472
            N+   S           + +RN+   ++    +KLF  G+D+ ++ SG +  ++S P+I
Sbjct: 409 ENVVAPSAHLKLSRHASLKPVRNLGPGESGAAIDKLFLYGRDDFRRPSGVRPSSSSSPRI 468

Query: 473 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSRAESFDH-GQIAEVLEAGKFLPIRK 531
                                             SR  SFDH G I E  ++    P +K
Sbjct: 469 SFSRSSSRSFQDDFDDPDFPCPFDVEYDDITDRNSRPGSFDHRGDIHEPFDSSGSYP-KK 527

Query: 532 SQDAAVGALVHMLKKAAPLHQDFSTSEHLSPGTRPETLSNNSIQEPNQVVDGLNQASIMS 591
           SQDAAVGALV MLKKA PL QD S S      +RPE  SNN+       +   +  +   
Sbjct: 528 SQDAAVGALVRMLKKAPPLRQDVSES------SRPEICSNNNKPAGAHEIAVASITASGI 581

Query: 592 TMNRKTTADALEEFYSYREMKNLLLM 617
            +  KTTADALEE  SY+EMKN LL+
Sbjct: 582 ALASKTTADALEELRSYKEMKNHLLL 607


>AT3G49590.1 | Symbols:  | Autophagy-related protein 13 |
           chr3:18377892-18380104 FORWARD LENGTH=603
          Length = 603

 Score =  135 bits (341), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 127/288 (44%), Gaps = 43/288 (14%)

Query: 6   SEAAKLEQIITEFFAKSLHIILESRAISAXXXXXXXXXXXXXXXXXXXXVRPRDKWFNLA 65
           S+  +LEQI++ FF K+LHI+L SR  S                     VR  DKWFNL 
Sbjct: 9   SDIGRLEQIVSHFFPKALHIVLNSRIPS------LQSRGRTRERLSGLNVRKSDKWFNLV 62

Query: 66  LRDCPAALENTELWRHGNM------DPIVVDVVLVQRDQTXXXXXXXXXXXXXXXKERYP 119
           + D PAALE    W H N+      D I+V  +                       ER+ 
Sbjct: 63  MGDRPAALEKLHSW-HRNILDSMIIDIILVHPISNDNLDDDDDHSDSVVRSAETVIERW- 120

Query: 120 FCWNTMMDXXXXXXXXXXXXXXXXXXXQYESRKPXXXXXXXXXXXXXXXLHALYKKSTLL 179
                                      QYE+                     +YKKS +L
Sbjct: 121 -------------------------VVQYEN----PLIMSPQSSDSATRYQKVYKKSIIL 151

Query: 180 LRSLYATVRLLPAYKIFRELNSNGKICAFTLAHRVSTFVEPFTSKEEAKMLKFGFTPVDT 239
           LRSLYA  RLLPAY++ R+L+S+     + L ++VS+F + F+      M +F F PV+ 
Sbjct: 152 LRSLYAQTRLLPAYRVSRQLSSSLASSGYDLIYKVSSFSDIFSGPVTETMKEFRFAPVEV 211

Query: 240 SSGRLCLSVMYCPSVSDVSSEPSTPMSPQVITDYVGSPMADPLRRYPS 287
             GRLC SV Y   +SD +      + P++ITDYVGSP  DP+R +PS
Sbjct: 212 PPGRLCASVTYRSDLSDFNLGAHITLPPRIITDYVGSPATDPMRFFPS 259



 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 19/102 (18%)

Query: 517 IAEVLEAGKFLPIRKSQDAAVGALVHMLKKAAPLHQDFSTSEHLSPGTRPETLSNNSIQE 576
           I++ L  G+    R SQDAAVG LVHMLK A PL QD ST             S + +Q 
Sbjct: 510 ISQSLPLGR----RSSQDAAVGVLVHMLKTAPPLRQDSST----------YMASMSGVQR 555

Query: 577 PNQVVDGLNQASIMSTMNRKTTADALEEFYSYREMKNLLLMR 618
              V    ++ S+      ++T+DALEE  +Y+++K+LLL +
Sbjct: 556 EGSVSGTESEFSMA-----RSTSDALEELRNYKQLKDLLLSK 592


>AT3G49590.2 | Symbols:  | Autophagy-related protein 13 |
           chr3:18377892-18380104 FORWARD LENGTH=603
          Length = 603

 Score =  135 bits (341), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 127/288 (44%), Gaps = 43/288 (14%)

Query: 6   SEAAKLEQIITEFFAKSLHIILESRAISAXXXXXXXXXXXXXXXXXXXXVRPRDKWFNLA 65
           S+  +LEQI++ FF K+LHI+L SR  S                     VR  DKWFNL 
Sbjct: 9   SDIGRLEQIVSHFFPKALHIVLNSRIPS------LQSRGRTRERLSGLNVRKSDKWFNLV 62

Query: 66  LRDCPAALENTELWRHGNM------DPIVVDVVLVQRDQTXXXXXXXXXXXXXXXKERYP 119
           + D PAALE    W H N+      D I+V  +                       ER+ 
Sbjct: 63  MGDRPAALEKLHSW-HRNILDSMIIDIILVHPISNDNLDDDDDHSDSVVRSAETVIERW- 120

Query: 120 FCWNTMMDXXXXXXXXXXXXXXXXXXXQYESRKPXXXXXXXXXXXXXXXLHALYKKSTLL 179
                                      QYE+                     +YKKS +L
Sbjct: 121 -------------------------VVQYEN----PLIMSPQSSDSATRYQKVYKKSIIL 151

Query: 180 LRSLYATVRLLPAYKIFRELNSNGKICAFTLAHRVSTFVEPFTSKEEAKMLKFGFTPVDT 239
           LRSLYA  RLLPAY++ R+L+S+     + L ++VS+F + F+      M +F F PV+ 
Sbjct: 152 LRSLYAQTRLLPAYRVSRQLSSSLASSGYDLIYKVSSFSDIFSGPVTETMKEFRFAPVEV 211

Query: 240 SSGRLCLSVMYCPSVSDVSSEPSTPMSPQVITDYVGSPMADPLRRYPS 287
             GRLC SV Y   +SD +      + P++ITDYVGSP  DP+R +PS
Sbjct: 212 PPGRLCASVTYRSDLSDFNLGAHITLPPRIITDYVGSPATDPMRFFPS 259



 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 19/102 (18%)

Query: 517 IAEVLEAGKFLPIRKSQDAAVGALVHMLKKAAPLHQDFSTSEHLSPGTRPETLSNNSIQE 576
           I++ L  G+    R SQDAAVG LVHMLK A PL QD ST             S + +Q 
Sbjct: 510 ISQSLPLGR----RSSQDAAVGVLVHMLKTAPPLRQDSST----------YMASMSGVQR 555

Query: 577 PNQVVDGLNQASIMSTMNRKTTADALEEFYSYREMKNLLLMR 618
              V    ++ S+      ++T+DALEE  +Y+++K+LLL +
Sbjct: 556 EGSVSGTESEFSMA-----RSTSDALEELRNYKQLKDLLLSK 592


>AT3G49590.3 | Symbols:  | Autophagy-related protein 13 |
           chr3:18377892-18380104 FORWARD LENGTH=618
          Length = 618

 Score =  135 bits (340), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 127/288 (44%), Gaps = 43/288 (14%)

Query: 6   SEAAKLEQIITEFFAKSLHIILESRAISAXXXXXXXXXXXXXXXXXXXXVRPRDKWFNLA 65
           S+  +LEQI++ FF K+LHI+L SR  S                     VR  DKWFNL 
Sbjct: 9   SDIGRLEQIVSHFFPKALHIVLNSRIPS------LQSRGRTRERLSGLNVRKSDKWFNLV 62

Query: 66  LRDCPAALENTELWRHGNM------DPIVVDVVLVQRDQTXXXXXXXXXXXXXXXKERYP 119
           + D PAALE    W H N+      D I+V  +                       ER+ 
Sbjct: 63  MGDRPAALEKLHSW-HRNILDSMIIDIILVHPISNDNLDDDDDHSDSVVRSAETVIERW- 120

Query: 120 FCWNTMMDXXXXXXXXXXXXXXXXXXXQYESRKPXXXXXXXXXXXXXXXLHALYKKSTLL 179
                                      QYE+                     +YKKS +L
Sbjct: 121 -------------------------VVQYEN----PLIMSPQSSDSATRYQKVYKKSIIL 151

Query: 180 LRSLYATVRLLPAYKIFRELNSNGKICAFTLAHRVSTFVEPFTSKEEAKMLKFGFTPVDT 239
           LRSLYA  RLLPAY++ R+L+S+     + L ++VS+F + F+      M +F F PV+ 
Sbjct: 152 LRSLYAQTRLLPAYRVSRQLSSSLASSGYDLIYKVSSFSDIFSGPVTETMKEFRFAPVEV 211

Query: 240 SSGRLCLSVMYCPSVSDVSSEPSTPMSPQVITDYVGSPMADPLRRYPS 287
             GRLC SV Y   +SD +      + P++ITDYVGSP  DP+R +PS
Sbjct: 212 PPGRLCASVTYRSDLSDFNLGAHITLPPRIITDYVGSPATDPMRFFPS 259



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 19/102 (18%)

Query: 517 IAEVLEAGKFLPIRKSQDAAVGALVHMLKKAAPLHQDFSTSEHLSPGTRPETLSNNSIQE 576
           I++ L  G+    R SQDAAVG LVHMLK A PL QD ST             S + +Q 
Sbjct: 525 ISQSLPLGR----RSSQDAAVGVLVHMLKTAPPLRQDSST----------YMASMSGVQR 570

Query: 577 PNQVVDGLNQASIMSTMNRKTTADALEEFYSYREMKNLLLMR 618
              V    ++ S+      ++T+DALEE  +Y+++K+LLL +
Sbjct: 571 EGSVSGTESEFSMA-----RSTSDALEELRNYKQLKDLLLSK 607