Miyakogusa Predicted Gene

Lj1g3v1265870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1265870.1 Non Chatacterized Hit- tr|J3MKR0|J3MKR0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,39.31,2e-18,DnaJ molecular chaperone homology domain,Heat
shock protein DnaJ, N-terminal; seg,NULL; SUBFAMILY NO,CUFF.27050.1
         (277 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18465.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   118   4e-27
AT2G42080.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    87   2e-17
AT3G58020.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    83   2e-16

>AT2G18465.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr2:8003223-8004742 REVERSE LENGTH=268
          Length = 268

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 88/143 (61%), Gaps = 23/143 (16%)

Query: 148 DGNPEQIFHGTFGNRCF--------TFRNLNGS-SEHSASGFEWKE------HSNRTNKW 192
           +GNP+  F GT  N  F        T ++   S S+ S +GFEW+E       S R+  W
Sbjct: 134 EGNPDDDF-GTDANNTFENKWRERWTAQSQKASYSKDSTAGFEWREGWSWTTQSQRSKSW 192

Query: 193 RTASDDESDNEDHGSCCVGSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSS 252
              S DE  N       V   S+R +LGLP  GP+K++DVKNAFR SALKWHPDKHQG S
Sbjct: 193 NKESFDEPLN-------VEFRSERIVLGLPLDGPIKVDDVKNAFRSSALKWHPDKHQGPS 245

Query: 253 QAMAEEKFKLCVNAYKTLCNALS 275
           Q  A+EKFKLCV+AYK+LC+AL+
Sbjct: 246 QVAAQEKFKLCVDAYKSLCSALA 268


>AT2G42080.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr2:17553409-17555475 REVERSE LENGTH=263
          Length = 263

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 20/150 (13%)

Query: 140 EFCFFEEFDGNPEQIFHGTFG-NRCFTFRNLNGSSEHSASGFEWKEHSNR-----TNKWR 193
           +FC  +E D + + +F   FG +R F+F     S  H      W+ HS+R        WR
Sbjct: 118 DFCEVDE-DFDVDYVFRTAFGGSRGFSF-----SFTHEEDEPRWRHHSSRFSNNSNRSWR 171

Query: 194 T--------ASDDESDNEDHGSCCVGSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHP 245
           +          +D + +           S R  LGL  +GPL ++DVK+A+R  ALKWHP
Sbjct: 172 SKYRLDEDEEEEDYTSDSSDSESEPNQVSHRQALGLSPSGPLNLKDVKHAYRTCALKWHP 231

Query: 246 DKHQGSSQAMAEEKFKLCVNAYKTLCNALS 275
           D+HQGS++  AE KFKLC  AY++LC  LS
Sbjct: 232 DRHQGSTKEAAEAKFKLCSVAYQSLCEKLS 261


>AT3G58020.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr3:21479501-21480981 FORWARD LENGTH=254
          Length = 254

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 10/81 (12%)

Query: 195 ASDDESDNEDHGSCCVGSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSSQA 254
            SD E + E H          R  LGL S+GPL +EDVK A+R  ALKWHPD+H  S++ 
Sbjct: 182 VSDTEPNQESH----------RQTLGLSSSGPLNLEDVKIAYRACALKWHPDRHHTSTKN 231

Query: 255 MAEEKFKLCVNAYKTLCNALS 275
            AEEKFKLC  AY++LC  L+
Sbjct: 232 EAEEKFKLCTVAYQSLCEKLA 252