Miyakogusa Predicted Gene

Lj1g3v1233750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1233750.1 Non Chatacterized Hit- tr|I3S7L0|I3S7L0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.84,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; DUF502,Protein of
unknown function DUF502,CUFF.27035.1
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43130.1 | Symbols: LCV2 | like COV 2 | chr1:16228661-1623115...   360   e-100
AT2G20120.1 | Symbols: COV1 | Protein of unknown function (DUF50...   332   2e-91
AT2G20130.1 | Symbols: LCV1 | like COV 1 | chr2:8690614-8692234 ...   329   1e-90
AT2G18460.1 | Symbols: LCV3 | like COV 3 | chr2:8001320-8002854 ...   315   2e-86

>AT1G43130.1 | Symbols: LCV2 | like COV 2 | chr1:16228661-16231158
           REVERSE LENGTH=261
          Length = 261

 Score =  360 bits (924), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/256 (69%), Positives = 206/256 (80%), Gaps = 4/256 (1%)

Query: 1   MPEEKESTSIPLSQAEDNASCDDPEDPAKXXXXXXXXXTRRACCFVLQSWFSKKFMTGCV 60
           M E KE+T+  LSQ        DP+D  K         TR+AC  VLQSW SKKFMTG V
Sbjct: 1   MAEGKEATTSSLSQGL--TPHQDPDDAPKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFV 58

Query: 61  VLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGFITSLAFVFLIGVFVSSWIGGT 120
           VLFPVAVTF ITWWFIQFVDGFFSPIY  LG+DIFGLGFITS+ F F +G+F SSW+G T
Sbjct: 59  VLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGST 118

Query: 121 VFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITST 180
           VFW+GE FI++MP V+HIYSASKQIS AISPDQNTTAFKEVAIIRHPR+GEYAFGFITS+
Sbjct: 119 VFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSS 178

Query: 181 VILQKENEDEELCSVFVPTNHLYIGDILLVNSKDVIRPNLSIREGIEIIVSGGMTMPQLI 240
           V LQ ++ +EELCSV+VPTNHLYIGD+ LV+S+++IRPNLSIREGIEIIVS GMTMPQ+I
Sbjct: 179 VTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVI 238

Query: 241 SPVERVTR--PNERIL 254
           S V+R T   P++  L
Sbjct: 239 SHVDRTTNRTPHQHSL 254


>AT2G20120.1 | Symbols: COV1 | Protein of unknown function (DUF502)
           | chr2:8687568-8689321 REVERSE LENGTH=268
          Length = 268

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 150/199 (75%), Positives = 181/199 (90%)

Query: 47  LQSWFSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGFITSLAFV 106
           ++ W SKKFMTGCV+L P+A+TF+ITWWFI FVDGFFSPIY++LGI++FG GF+TS+AF+
Sbjct: 59  IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFI 118

Query: 107 FLIGVFVSSWIGGTVFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRH 166
           FL+GVF+SSW+G +V  +GEWFIK+MP VRHIY+ASKQIS AISPDQNT AFKEVAIIRH
Sbjct: 119 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 178

Query: 167 PRVGEYAFGFITSTVILQKENEDEELCSVFVPTNHLYIGDILLVNSKDVIRPNLSIREGI 226
           PRVGEYAFGFITSTV+LQ    +EELC V+VPTNHLYIGD+LLVNS DVIRPNLS+REGI
Sbjct: 179 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGI 238

Query: 227 EIIVSGGMTMPQLISPVER 245
           EI+VSGGM+MPQ++S V++
Sbjct: 239 EIVVSGGMSMPQILSTVDK 257


>AT2G20130.1 | Symbols: LCV1 | like COV 1 | chr2:8690614-8692234
           REVERSE LENGTH=256
          Length = 256

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 151/199 (75%), Positives = 179/199 (89%)

Query: 47  LQSWFSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGFITSLAFV 106
           ++ W SKKFMTGCV+L P+AVTF+ TWWFI FVDGFFSPIY+ LGI+IFG GF+TS+AF+
Sbjct: 49  IRGWASKKFMTGCVILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFI 108

Query: 107 FLIGVFVSSWIGGTVFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRH 166
           FL+GVF+SSW+G +V  +GEWFIK+MP VRHIY+ASKQIS AISPDQNT AFKEVAIIRH
Sbjct: 109 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 168

Query: 167 PRVGEYAFGFITSTVILQKENEDEELCSVFVPTNHLYIGDILLVNSKDVIRPNLSIREGI 226
           PRVGEYAFGFITSTV+LQ    +EELC V+VPTNHLYIGDILLVNS DVIRPNLS+REGI
Sbjct: 169 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 228

Query: 227 EIIVSGGMTMPQLISPVER 245
           EI+VSGGM+MPQ++S +++
Sbjct: 229 EIVVSGGMSMPQILSTLDK 247


>AT2G18460.1 | Symbols: LCV3 | like COV 3 | chr2:8001320-8002854
           FORWARD LENGTH=274
          Length = 274

 Score =  315 bits (806), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 145/219 (66%), Positives = 184/219 (84%), Gaps = 2/219 (0%)

Query: 40  RRACCFVLQSWFSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDIFGLGF 99
           + A   V++SW SKKFMTGCV+L P+AVTF+ TWWFI FVDGFFSPIY+ LGI++FGLGF
Sbjct: 42  KEAIYKVIRSWASKKFMTGCVILLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGF 101

Query: 100 ITSLAFVFLIGVFVSSWIGGTVFWIGEWFIKQMPLVRHIYSASKQISAAISPDQNTTAFK 159
           +TS+ F+F++GVF+SSW+G +V  IGEWFIK+MPLV +IYSASKQIS AISPDQ++ AFK
Sbjct: 102 VTSITFIFMVGVFMSSWLGASVLSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFK 161

Query: 160 EVAIIRHPRVGEYAFGFITSTVILQKENEDEELCSVFVPTNHLYIGDILLVNSKDVIRPN 219
           EVAIIRHP +GEYAFGFITSTVIL+     EELC V+VPTNHLY+GDI L++SKD+IRPN
Sbjct: 162 EVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPN 221

Query: 220 LSIREGIEIIVSGGMTMPQLISPVERVTRPNERILNRIG 258
           LS+REGIEI++SGGM++P +++ ++  T    R+L   G
Sbjct: 222 LSVREGIEIVISGGMSIPHMLTTLDSET--IHRMLESFG 258