Miyakogusa Predicted Gene

Lj1g3v1221310.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1221310.2 Non Chatacterized Hit- tr|I1KRM4|I1KRM4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25448 PE,32.91,4e-19,no
description,Tetratricopeptide-like helical; TPR-like,NULL; seg,NULL;
TPR_REGION,Tetratricopeptide,CUFF.27010.2
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39470.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   208   2e-54
AT3G18420.1 | Symbols:  | Protein prenylyltransferase superfamil...   121   3e-28
AT3G53560.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   110   8e-25
AT2G37400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   109   2e-24
AT5G02590.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    96   1e-20
AT3G09490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    75   5e-14

>AT4G39470.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:18359735-18361165 REVERSE
           LENGTH=341
          Length = 341

 Score =  208 bits (530), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/158 (62%), Positives = 127/158 (80%), Gaps = 1/158 (0%)

Query: 44  DSRNVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKT 103
           +  N+EA+K +VY K+RRGK  +AVK+VE L+ LEP+EVEWKLL ALCYETMGELSKAK 
Sbjct: 129 EPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKR 188

Query: 104 LFREILEKMPLQVRALHGLAMVMHKNHEGPAVFEMLNKARELASNENRVTEERNIRILIA 163
           L+++IL++ PL +RALHGLAMVMHK H+  +VF+ML +A E+A   NRVTEERNI++LI 
Sbjct: 189 LYKDILKEQPLLIRALHGLAMVMHKTHDT-SVFDMLIEAMEVARQGNRVTEERNIQVLIG 247

Query: 164 QMLVVQGNLEEGLKRFQDLIDENYRDFRPYFCQGCSCS 201
           QM +V+G  EEGLK FQ ++++N RDFRPY CQG   S
Sbjct: 248 QMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYS 285


>AT3G18420.1 | Symbols:  | Protein prenylyltransferase superfamily
           protein | chr3:6324771-6325721 REVERSE LENGTH=316
          Length = 316

 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 95/154 (61%)

Query: 48  VEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKTLFRE 107
           VE L+ ++  K+ +G+  EA+K +E L+  +P E EWK L+A     MG    A+ +F E
Sbjct: 118 VETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEE 177

Query: 108 ILEKMPLQVRALHGLAMVMHKNHEGPAVFEMLNKARELASNENRVTEERNIRILIAQMLV 167
           IL++ PL   AL   A++M ++ EG AV + L  A  +A  E  V E R++R++IAQ+  
Sbjct: 178 ILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHF 237

Query: 168 VQGNLEEGLKRFQDLIDENYRDFRPYFCQGCSCS 201
           +Q N++E LK ++ L  E+ +DFRPYFC+G   S
Sbjct: 238 LQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYS 271


>AT3G53560.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:19859954-19860976 REVERSE
           LENGTH=340
          Length = 340

 Score =  110 bits (274), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 92/154 (59%), Gaps = 5/154 (3%)

Query: 47  NVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKTLFR 106
           +V+AL+ ++  KI+  K  EAV+ ++ LI LEP E EW +L A  +   G+L  AKT F 
Sbjct: 129 DVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTGFE 188

Query: 107 EILEKMPLQVRALHGLAMVMHKNHEGPAVFEMLNKARELA---SNENRVTEERNIRILIA 163
           EIL K PL+V A HGL M    +  G  + E+ ++  E       EN   + R+ ++L+A
Sbjct: 189 EILAKDPLRVEAYHGLLMAY--SDAGLDLKEVESRIEEAMLKCKKENNQNDFRDFKLLVA 246

Query: 164 QMLVVQGNLEEGLKRFQDLIDENYRDFRPYFCQG 197
           Q+ V++G   E LK +Q+L+ E  RDFRPY CQG
Sbjct: 247 QIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQG 280


>AT2G37400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:15696365-15697366 REVERSE
           LENGTH=333
          Length = 333

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 92/152 (60%), Gaps = 1/152 (0%)

Query: 47  NVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKTLFR 106
           +VEAL+ ++  +I+  K  EA++ ++ LI+LEP E EW +L A  +   G+L  AKT F 
Sbjct: 129 DVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGFE 188

Query: 107 EILEKMPLQVRALHGLAMVMHKNHEG-PAVFEMLNKARELASNENRVTEERNIRILIAQM 165
           EIL K PL+V A HGL M    + +   AV + + +A      E    + R+ ++L+AQ+
Sbjct: 189 EILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQI 248

Query: 166 LVVQGNLEEGLKRFQDLIDENYRDFRPYFCQG 197
            V++G   E LK +++L+ E  RDFRPY CQG
Sbjct: 249 RVIEGKHNEALKLYEELVKEEPRDFRPYLCQG 280


>AT5G02590.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:583117-584097 FORWARD
           LENGTH=326
          Length = 326

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 88/152 (57%), Gaps = 2/152 (1%)

Query: 47  NVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKTLFR 106
           +VEAL+ ++  K +    + A++ +  LI+++P E EW++L A      G+   A   F 
Sbjct: 128 DVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFE 187

Query: 107 EILEKMPLQVRALHGLAMVMHKNHEGPAVFEM-LNKARELASNENRVTEERNIRILIAQM 165
           E+L K P +V A HGL M   ++    +  E  +N+A E    EN+  + R+  +LIAQ+
Sbjct: 188 EVLSKDPFRVEAYHGLVMAYSESESKLSEIESRINEAIEKCKKENK-KDFRDFMLLIAQI 246

Query: 166 LVVQGNLEEGLKRFQDLIDENYRDFRPYFCQG 197
            V++GN  E L+ +Q+L+ +  +DFRPY CQG
Sbjct: 247 RVIKGNPIEALRVYQELVKDEPKDFRPYLCQG 278


>AT3G09490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:2915636-2916640 FORWARD
           LENGTH=334
          Length = 334

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 5/157 (3%)

Query: 45  SRNVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKAKTL 104
           S +V AL ++   K +  K  +A+ F++ LI++EP E +W  + A      G+   A   
Sbjct: 110 SNDVNALSLLTEIKFKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSESAIEA 169

Query: 105 FREILEKMPLQVRALHGLAMVMHKNHEGPAVFEM---LNKARELASNENRVTEERNIRIL 161
           F EILEK P++V A H L  VM   +  P + E+   +NK       E +  E    R+L
Sbjct: 170 FEEILEKDPIRVDAYHYL--VMEYYNSKPKLTEIEKRINKVIRRCKKEKKTKEILGFRML 227

Query: 162 IAQMLVVQGNLEEGLKRFQDLIDENYRDFRPYFCQGC 198
           IAQ+  ++G   E ++  ++L+ E+  DF  Y  QG 
Sbjct: 228 IAQIRFIEGKSVEAIRICEELVKEDPNDFTIYLFQGV 264