Miyakogusa Predicted Gene

Lj1g3v1182040.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1182040.2 tr|C1N1M4|C1N1M4_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_3545,30.59,5e-19,TRM,tRNA
(guanine(26)-N(2))-dimethyltransferase; N(2),N(2)-DIMETHYLGUANOSINE
TRNA METHYLTRANSFERASE,,CUFF.26925.2
         (218 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56330.1 | Symbols:  | N2,N2-dimethylguanosine tRNA methyltra...   281   3e-76
AT5G15810.1 | Symbols:  | N2,N2-dimethylguanosine tRNA methyltra...    49   3e-06

>AT3G56330.1 | Symbols:  | N2,N2-dimethylguanosine tRNA
           methyltransferase | chr3:20890250-20891933 FORWARD
           LENGTH=433
          Length = 433

 Score =  281 bits (718), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 123/202 (60%), Positives = 166/202 (82%)

Query: 12  VTVLISGAVREAAVLGYHITPLYSYYAYHGPVFRVLLRLNRGKIHDSRHYGYIGFCHKCG 71
           + +LI GAVREAA+LGYH+TPL+SYY+YHGPVFRV+LR++RGK+H+ R+YG++  C+ CG
Sbjct: 231 LRMLIGGAVREAALLGYHVTPLFSYYSYHGPVFRVMLRVHRGKLHEDRNYGFVTHCNLCG 290

Query: 72  NSHEFSWDQLGQFSCSCSMPQVSNSLVVSGPLWTGPLHDAAYLTDMLNLAKQWGWIGCDG 131
           +SH   +D+LG   C CS  + S+SLVVSGP+W GPLHDA+Y+T+ML LAK+WGW+    
Sbjct: 291 HSHTLRFDELGLMGCPCSDTKASSSLVVSGPMWLGPLHDASYVTEMLELAKEWGWVSEGT 350

Query: 132 KDSLEKLINVMVDESDPKLPFGYIKLDEMASRAKINSPPLKTLMSAIQQKGYAASRSHIK 191
              L+KL+++M++ESDP+LP GY K+DEMASRAK+NSPPLK +MSA+ ++GYAASRSHI 
Sbjct: 351 GMDLDKLLSIMIEESDPRLPPGYTKMDEMASRAKMNSPPLKKMMSALVKEGYAASRSHII 410

Query: 192 TNAIKTNCPMTECISIAKELLQ 213
            NA+KT+CPM+  + IAKE L 
Sbjct: 411 PNALKTDCPMSHFVRIAKENLH 432


>AT5G15810.1 | Symbols:  | N2,N2-dimethylguanosine tRNA
           methyltransferase | chr5:5157798-5161121 FORWARD
           LENGTH=691
          Length = 691

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 101 GPLWTGPLHDAAYLTDMLNLAKQWGWIGCDGKDSLEKLINVM--VDESDPKLPFGYIKLD 158
           GP+W+ P+HD  ++  +LN  K       D   + +++  V+  + E  P +P  ++ L 
Sbjct: 459 GPIWSAPIHDQEWVNSILNGVKSMK----DRYPAYDRICAVLTTISEELPDVPL-FLSLH 513

Query: 159 EMASRAKINSPPLKTLMSAIQQKGYAASRSHIKTNAIKTNCPM 201
            +++  K  SP      SA+    Y  S SH+    IKT+ PM
Sbjct: 514 SLSATLKCTSPSAALFRSAVINAKYRVSGSHVNPLGIKTDAPM 556