Miyakogusa Predicted Gene

Lj1g3v1180820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1180820.1 Non Chatacterized Hit- tr|I1JYB4|I1JYB4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25682
PE,68.4,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Mini-chromosome maintenance complex-binding
prot,CUFF.26922.1
         (505 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40550.1 | Symbols: ETG1 | E2F target gene 1 | chr2:16934927-...   498   e-141

>AT2G40550.1 | Symbols: ETG1 | E2F target gene 1 |
           chr2:16934927-16938033 FORWARD LENGTH=589
          Length = 589

 Score =  498 bits (1281), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/504 (51%), Positives = 337/504 (66%), Gaps = 20/504 (3%)

Query: 1   MFGNECYIGAYKDGSAWRTNKFMDFSPVPMASPSPDTLIWERRVHYCIPIPGLNPWAE-- 58
           M GNE Y GAYKD S WRTNK+ D S  P  S S +  +WERR+ YC+P+PG N W E  
Sbjct: 83  MLGNEFYAGAYKDDSTWRTNKYSDVSQFPEGS-STEIQVWERRLLYCVPVPGKNQWTECS 141

Query: 59  ---VGNDSMDWTSEQRVKRRRPED---DSPDMPVSCDNDQGSPSTKKMREGEDSSLTTKS 112
              + N  +D T + R KR R ++   DS D         GSP  KKM+ GE +S  ++S
Sbjct: 142 SQELKNRFLDLTGQNREKRVRVDEEMTDSMDSSTLEAGRNGSP-FKKMKVGEATSSASES 200

Query: 113 QRASLEIAVSSTSLMSGLDSNSPACIVKIYDTPDSELNLNDIFEFVGILT-DPVLHXXXX 171
           Q         +TS      ++S  C+VKIYD+P+S+L LND+ EF+G+LT DP++     
Sbjct: 201 QVPQTSGIPPATS------ADSLPCLVKIYDSPESDLKLNDVVEFLGVLTFDPIVMMDTD 254

Query: 172 XXXXXXXXXXXXXCAEFMHPKVPRLHCLIHRKLAVQDFIQNNPIL-EPK-PDLVKGIRET 229
                          +    KVPRLHCLIHRKL  Q F+  + +L EPK P + K IRE+
Sbjct: 255 TLDENSDALSEAESVQMPSGKVPRLHCLIHRKLETQHFLHGSSLLPEPKSPQIFKEIRES 314

Query: 230 FSRHLSSVLGNDDVAAHFVLLHLFSKVHARVDDHFPVGNLSVNLTSFSKETASIFGSQLT 289
             ++L+ +LGND +AA F+LLHL SKVH RVD+   VG LS+NL   +KE+ SIFG+QL+
Sbjct: 315 LMKYLTGLLGNDHIAAQFLLLHLLSKVHGRVDN-VAVGKLSLNLIHLNKESMSIFGTQLS 373

Query: 290 LVVKNLLPFTHSIPLTVEYLNTASLVPTKNYETDRLETAVLQMAESSHLIVDETKLEAGS 349
             +K+LLPFT SIPLT+EYLNTAS  P K+Y  +RL   VLQ+A+ +HLI+DET+L+ G+
Sbjct: 374 GALKSLLPFTQSIPLTIEYLNTASFGPKKDYGINRLMPGVLQIADGTHLILDETELQPGT 433

Query: 350 LNSVGVENVRLLGDLVELQKVDYNFMYCTMPIETDVQVLVLSEGKSNILPADVIVPFQPS 409
           LNSVGVEN  LL +L+E QKV+Y+F Y  M + TDVQ+L+ SEGKSNI+PAD+++P QPS
Sbjct: 434 LNSVGVENANLLKNLLECQKVEYDFQYYKMEMATDVQMLIFSEGKSNIMPADLVLPLQPS 493

Query: 410 ATNCSEAVAAETLEAWRWYLATVRQLPHSIGSEVQKVVENDFVEARQTDRSLTPQDFSRL 469
             N  E +  ET E WR YLAT + L HSIG E+Q+VVEND V ARQTDRSL  QD SRL
Sbjct: 494 QVNSLEVITPETAETWRCYLATCKSLSHSIGQELQQVVENDLVAARQTDRSLGSQDLSRL 553

Query: 470 LTMGRLMSKSFGETSLSLEHWQMV 493
           LTM R+MS S+GET+LSLEHWQMV
Sbjct: 554 LTMARMMSVSYGETTLSLEHWQMV 577