Miyakogusa Predicted Gene
- Lj1g3v1169750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1169750.1 Non Chatacterized Hit- tr|K4BFH7|K4BFH7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,35.48,2e-19,no
description,Zinc finger, RING/FYVE/PHD-type; seg,NULL; RING FINGER
PROTEIN 6/12/38,NULL; RING/U-b,CUFF.26897.1
(162 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 130 5e-31
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 116 7e-27
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 110 4e-25
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 99 2e-21
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 96 1e-20
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 93 1e-19
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 91 3e-19
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 88 2e-18
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 87 4e-18
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 5e-17
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 82 2e-16
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 80 6e-16
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 80 7e-16
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 80 8e-16
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 80 9e-16
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 79 1e-15
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 79 2e-15
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 79 2e-15
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 78 3e-15
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 77 4e-15
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 77 4e-15
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 77 7e-15
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 76 9e-15
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 75 2e-14
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 3e-14
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 5e-14
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 6e-14
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 73 1e-13
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 1e-13
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 1e-13
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 72 2e-13
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 72 2e-13
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 71 3e-13
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 71 3e-13
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 71 4e-13
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 71 4e-13
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 70 5e-13
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 70 5e-13
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 70 6e-13
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 70 7e-13
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 70 7e-13
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 7e-13
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 8e-13
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 70 9e-13
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 69 1e-12
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 69 1e-12
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 69 1e-12
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 69 1e-12
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 69 2e-12
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 68 3e-12
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 3e-12
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 68 3e-12
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 68 3e-12
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 3e-12
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 5e-12
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 5e-12
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 67 6e-12
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 67 7e-12
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 7e-12
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 67 8e-12
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 66 1e-11
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 66 1e-11
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 2e-11
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 65 2e-11
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 64 3e-11
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 64 4e-11
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 64 6e-11
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 63 7e-11
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 63 1e-10
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 63 1e-10
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 63 1e-10
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 63 1e-10
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 62 1e-10
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 1e-10
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 1e-10
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 2e-10
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 2e-10
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 62 2e-10
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 62 2e-10
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 62 2e-10
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 62 2e-10
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 2e-10
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 61 3e-10
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 3e-10
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 3e-10
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 6e-10
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 8e-10
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 1e-09
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 1e-09
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 2e-09
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 59 2e-09
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 3e-09
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 3e-09
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 6e-09
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 57 7e-09
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 7e-09
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 57 7e-09
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 7e-09
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 9e-09
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 1e-08
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 1e-08
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 2e-08
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 2e-08
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 3e-08
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 3e-08
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 4e-08
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 54 4e-08
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 5e-08
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 54 5e-08
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 54 6e-08
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 54 7e-08
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 53 7e-08
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 8e-08
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 9e-08
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 53 1e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 1e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 1e-07
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 1e-07
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 1e-07
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 2e-07
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 2e-07
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 2e-07
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-07
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-07
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 52 2e-07
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 2e-07
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 52 2e-07
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 2e-07
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 4e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 4e-07
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 4e-07
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 5e-07
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 5e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 5e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-07
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-07
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-07
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 7e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 8e-07
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 49 1e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 49 1e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 1e-06
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 1e-06
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 1e-06
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 1e-06
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 1e-06
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 49 1e-06
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 2e-06
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 48 2e-06
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 48 3e-06
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 48 3e-06
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 3e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 3e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 48 3e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 48 4e-06
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 4e-06
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 47 4e-06
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 4e-06
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 47 4e-06
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 5e-06
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 5e-06
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 47 5e-06
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 6e-06
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 6e-06
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 6e-06
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 130 bits (326), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
Query: 16 PNSTGPGSRNWSRESLTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFA 75
P + P + N + + FDT MV ILA L+ A LI +L L S +RC R +R F
Sbjct: 8 PQANAPANANPKPKGGINDTYFDTNMVIILAALLCA--LICALSLNSALRCVLRITRRFT 65
Query: 76 FE----TPDEAVPRLG----SKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGV 127
+ A LG + LKK A QIP +YGSG AT+C ICLG+F DG
Sbjct: 66 SDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGE 125
Query: 128 KVRVLPKCNHVFHVKCIDVWLLSHSSCPNCRE 159
KVRVLPKCNH FHV+CID WLLS SSCP CR+
Sbjct: 126 KVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQ 157
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 116 bits (290), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 81/128 (63%), Gaps = 9/128 (7%)
Query: 35 SDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGS---KEL 91
+ DT MV ILA L+ A LI +L + S++RC RC+R F TP+E + K +
Sbjct: 35 ASMDTHMVIILAALLCA--LICALGINSVLRCVLRCTRRF---TPNEDPVDTNANVAKGI 89
Query: 92 KKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSH 151
KK A IP Y S AT+C ICLG+F++G VRVLPKCNH FHVKCID WLLSH
Sbjct: 90 KKRALKVIPVDSY-SPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSH 148
Query: 152 SSCPNCRE 159
SSCP CR+
Sbjct: 149 SSCPTCRQ 156
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 62 SIVRCAQRCSRSFAFETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLG 121
SI+RCA RC F + A LKK + P YGSG AAT+C+ICLG
Sbjct: 53 SILRCAMRCG--FGLSSSAAAGTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLG 110
Query: 122 EFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
EF DG +VRVLP CNH FH+ CID WL+SHSSCPNCR +
Sbjct: 111 EFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 33 GSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVP-RLGSKEL 91
G ++FD +V +L+ L+ A L+ SL L SI+RCA RCS E + P RL + +
Sbjct: 48 GDNNFDANVVMVLSVLLCA--LVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGV 105
Query: 92 KKSAFHQIPKVVYGSG-STSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
K+ A V Y + + T+C+ICL EF+ +V++LP C+H FHV+CID WL S
Sbjct: 106 KRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSS 165
Query: 151 HSSCPNCREVI 161
HSSCP CR +
Sbjct: 166 HSSCPTCRHCL 176
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 16/149 (10%)
Query: 17 NSTGPGSRNWSRESLTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCA---QRCSRS 73
NST P S F++ +V ILA L+ A I L+ ++ RCA + SR+
Sbjct: 13 NSTSPAE---------ASPPFNSDLVLILAVLLCALTCIIGLI--AVSRCAWLRRIASRN 61
Query: 74 FAFETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAA-TDCSICLGEFMDGVKVRVL 132
+ +T V +K LKK +PK+ Y S + +C+ICL EF G ++RVL
Sbjct: 62 RSDQTHPPPV-AAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120
Query: 133 PKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
P+C H FHV CID WL SHSSCP+CR+++
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 19/142 (13%)
Query: 27 SRESLTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRL 86
S E + SD I+ +L L+ GL ++VRCA + ++P
Sbjct: 18 SEEMIAAESDMVVILSALLCALICVAGLA------AVVRCAWLRRFTAGGDSPSP----- 66
Query: 87 GSKELKKSAFHQIPKVVYGSGSTSSAA-------TDCSICLGEFMDGVKVRVLPKCNHVF 139
+K LKK A +P+ + + ++S A T+C+ICL +F DG ++RVLP C H F
Sbjct: 67 -NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSF 125
Query: 140 HVKCIDVWLLSHSSCPNCREVI 161
HV+CID WL+S SSCP+CR ++
Sbjct: 126 HVECIDKWLVSRSSCPSCRRIL 147
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 7/146 (4%)
Query: 21 PGSRNWSRESLTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPD 80
P + N + + ++ ++ +L+ + G+I SL L I+RCA SRSF P
Sbjct: 32 PFAHNAQQAHVPDKNNLSGNVLMLLS--ILLCGIICSLGLHYIIRCAFIRSRSFMISDPI 89
Query: 81 E--AVPRLGS--KELKKSAFHQIPKVVYGSG-STSSAATDCSICLGEFMDGVKVRVLPKC 135
+ PR S K +KK A +P V Y + +C ICL +F+ G ++RVLPKC
Sbjct: 90 SIPSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKC 149
Query: 136 NHVFHVKCIDVWLLSHSSCPNCREVI 161
NH FH++CID WL H +CP CR +
Sbjct: 150 NHGFHLRCIDKWLTQHMTCPKCRHCL 175
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 16/137 (11%)
Query: 34 SSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRC--------AQRCSRSFAFETPDEAVPR 85
+SD I+ +L L+ GLI ++ RC R ++P V
Sbjct: 27 NSDLVVILAALLCALICVLGLI------AVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAA 80
Query: 86 LGSKELKKSAFHQIPKVVYGSGSTSSAA-TDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
+K LKK +PK+ + S S +C+ICL EF G ++RVLP+C H FHV CI
Sbjct: 81 -ANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACI 139
Query: 145 DVWLLSHSSCPNCREVI 161
D WL SHSSCP+CR+++
Sbjct: 140 DTWLGSHSSCPSCRQIL 156
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 53 GLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGS------KELKKSAFHQIPKVVYG- 105
G+I L L I+RCA R S F P VP L S K +KK A P V Y
Sbjct: 68 GIICCLGLHYIIRCALRRSTRFMISEP---VPSLSSTRGSSNKGIKKKALRMFPVVSYSP 124
Query: 106 SGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+ +C ICL +F+ G ++R+LPKCNH FHV+CID WL H +CP CR
Sbjct: 125 EMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 31 LTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETP---DEAVPRLG 87
+T ++ ++ +L+ L+ G+I L L I+RCA R S F P
Sbjct: 48 ITHENNLKGNVLMLLSVLIC--GIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSS 105
Query: 88 SKELKKSAFHQIPKVVYG-SGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDV 146
+K +KK A P V Y + +C ICL +F+ G ++R+LPKCNH FHV+CID
Sbjct: 106 NKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 147 WLLSHSSCPNCREVIA 162
WL H +CP CR +
Sbjct: 166 WLQHHLTCPKCRHCLV 181
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 31 LTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRL---G 87
+T ++ ++ +L+ L+ G+I L L I+RCA R + SF P +
Sbjct: 49 ITHENNLSGNVLMLLSVLIC--GIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSS 106
Query: 88 SKELKKSAFHQIPKVVYG-SGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDV 146
+K + K A P V Y + +C ICL +F+ G ++R+LPKC+H FHV+CID
Sbjct: 107 NKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDK 166
Query: 147 WLLSHSSCPNCREVI 161
WL H +CP CR +
Sbjct: 167 WLQQHLTCPKCRHCL 181
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 34 SSDFDTIMVFILAGLV--FAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEA-----VPRL 86
SS FD M ++ LV F F FS+ +R RC +R + P++A R
Sbjct: 56 SSRFDPTMAILMIVLVSVFFFLGFFSVYIR---RCLERV-MGMDYGNPNDAGNWLATNRQ 111
Query: 87 GSKELKKSAFHQIPKVVYGSGST---SSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKC 143
++ L S P Y + T A +CS+CL EF D +R++PKC HVFH C
Sbjct: 112 QARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGC 171
Query: 144 IDVWLLSHSSCPNCR 158
ID WL SH++CP CR
Sbjct: 172 IDAWLRSHTTCPLCR 186
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 34/163 (20%)
Query: 20 GPGSRNWSRESLTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETP 79
G S E L +D I+ +L LV GL ++ RCA R P
Sbjct: 9 GTASPPPPEEILAAETDMVVILSALLCALVCVAGLA------AVARCAWL--RRLTGVNP 60
Query: 80 ---DEAVPRLGSKELKKSAFHQIPKVV------------------YGSGSTSSAATDCSI 118
EA P +K LKK A +PK G G +S T+C+I
Sbjct: 61 AAVGEAPP--PNKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSS---TECAI 115
Query: 119 CLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
C+ EF +G ++R+LP C+H FHV CID WL S SSCP+CR ++
Sbjct: 116 CITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRIL 158
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 30 SLTGSSDFDTIMVFILAGLVFA-----FGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVP 84
S SS D I + + G V A F L+ S+ R Q +S +
Sbjct: 73 SQDSSSSLDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEE 132
Query: 85 RLGSKE-------------LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRV 131
+E L++S + I Y G TDC +CL EF + +R+
Sbjct: 133 EFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRL 192
Query: 132 LPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
LPKCNH FH+ CID WL SH++CP CR IA
Sbjct: 193 LPKCNHAFHISCIDTWLSSHTNCPLCRAGIA 223
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 16 PNSTGPGSRNWSRESLTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSF- 74
P S+ + + SS +++ +++GL A ++F VL I + ++ S F
Sbjct: 95 PKSSSAATLTLMNQKDPSSSSIVSVLCLVISGL--ALIIVFLGVLYLIFKFLRKSSTLFP 152
Query: 75 -----------AFETPD-EAVPRLGSKELKKSAFHQIPKVVYGSGSTS-SAATDCSICLG 121
+F +P + + L L ++A +P +YG+ + S DC++CL
Sbjct: 153 IPHFNYNPDLFSFSSPQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLN 212
Query: 122 EFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
EF D K+R+LP C+H FH+ CID WLLS+S+CP CR ++
Sbjct: 213 EFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLS 253
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 32 TGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKEL 91
+ S+DF T +L LV + LI +L L + +RC R + ET D+ P E
Sbjct: 31 SNSTDF-TANASVLLILVIS-ALICALSLYAAIRCFLRPT----LETEDDHKP---DPEA 81
Query: 92 KKSAFHQIPKVVYGSG-STSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
S+ P +VY S + A +C+ICL EF G ++VL KC H FHVKCI WL +
Sbjct: 82 AASSTPTTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLST 141
Query: 151 HSSCPNCREVI 161
SSCP CR I
Sbjct: 142 RSSCPTCRTSI 152
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 32 TGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKEL 91
TG + T + +L L F GL+ S+ +R R S + ++ R G L
Sbjct: 40 TGHTPSKTTVFAVLVTLFFLTGLL-SVYIRHCARSNPDSSTRYFRNRANDGSSRRGG--L 96
Query: 92 KKSAFHQIPKVVYGSGSTS---SAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL 148
+ P Y S S S +C+ICL E D VR+LP CNH+FH+ CID WL
Sbjct: 97 DNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWL 156
Query: 149 LSHSSCPNCR 158
SH++CP CR
Sbjct: 157 YSHATCPVCR 166
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L +S I Y SG +DCS+CL EF + +R+LPKCNH FH+ CID WL S
Sbjct: 117 LNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKS 176
Query: 151 HSSCPNCREVIA 162
HS+CP CR +
Sbjct: 177 HSNCPLCRAFVT 188
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 83 VPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVK 142
+P +G L +SA + I V + G T+CS+CL EF + +R+LPKC+H FH+
Sbjct: 105 IPTVG---LHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLN 161
Query: 143 CIDVWLLSHSSCPNCR 158
CID WLLSH +CP CR
Sbjct: 162 CIDTWLLSHKNCPLCR 177
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 74 FAFETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLP 133
FA E+ + L +KK F ++ K G TDCSICLGEF + +R+LP
Sbjct: 119 FALES---STAGLDDTLIKKIGFFKLKKHQNG---FKINGTDCSICLGEFNEDESLRLLP 172
Query: 134 KCNHVFHVKCIDVWLLSHSSCPNCREVI 161
KCNH FHV CID WL SHS+CP CR I
Sbjct: 173 KCNHTFHVVCIDRWLKSHSNCPLCRAKI 200
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 67 AQRCSRSFAFETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDG 126
+R R F F +A+ G + S+ +V+ + +CSICL E + G
Sbjct: 82 TRRQRRRFIFVPGQDALSNTGLTSFELSSL----PIVFFRQDSCKDGLECSICLSELVKG 137
Query: 127 VKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
K R+LPKCNH FHV+CID+W SHS+CP CR +
Sbjct: 138 DKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 113 ATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
++DCS+CL EF + +R+LPKCNH FHV CID WL SHS+CP CR I
Sbjct: 156 SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFI 204
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 41/68 (60%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L + +IP VY + S +CS+CL EF + + RVLPKC HVFHV CID W S
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 151 HSSCPNCR 158
SSCP CR
Sbjct: 148 RSSCPLCR 155
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 75 AFETPDEAVPRLGSKELKKSAFHQIPKV-VYGSGST-SSAATD-CSICLGEFMDGVKVRV 131
AF+ GSK L +IPK+ + G+ +T +S TD CS+CL +F G VR
Sbjct: 152 AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRS 211
Query: 132 LPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
LP C+H+FH+ CID WLL H SCP CR I
Sbjct: 212 LPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 84 PRLGSKELKKSAFHQIP-------KVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCN 136
P ++ L +SA IP VV G S + +CS+CL EF + K+R++P C
Sbjct: 95 PHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCC 154
Query: 137 HVFHVKCIDVWLLSHSSCPNCREVIA 162
HVFH+ CID+WL +++CP CR ++
Sbjct: 155 HVFHIDCIDIWLQGNANCPLCRTSVS 180
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
+C++CL + +DG K RVLP+CNH FHV CID+W SHS+CP CR +
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVG 166
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 33 GSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAV--PRLGSKE 90
G++ I++FI+ L F +L +VR + RS +P+E+ P +
Sbjct: 45 GNNRISPIILFIIVLLSVIF--FICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSD 102
Query: 91 LKKSAFHQI----------------PKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPK 134
+ Q+ P +Y + DC++CL EF + K+R+LP
Sbjct: 103 TYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPN 162
Query: 135 CNHVFHVKCIDVWLLSHSSCPNCR 158
C+H FH+ CID WLLS+S+CP CR
Sbjct: 163 CSHAFHIDCIDTWLLSNSTCPLCR 186
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L S +P + S T+ A +CS+CL EF D RV+P C H FHV CID+W S
Sbjct: 52 LNPSIIKSLPIFTF-SAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHS 110
Query: 151 HSSCPNCREVI 161
HSSCP CR +I
Sbjct: 111 HSSCPLCRSLI 121
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 40 IMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSF--------AFETPDEAVPRLGSKEL 91
++ L ++F + L+++ + R R ++ A + + L E+
Sbjct: 37 LLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNLHDAEI 96
Query: 92 KKSAFHQIPKVVYGSG-STSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
+S +P + Y + +DC++CL EF ++R+LPKC+H FHV+CID WLL+
Sbjct: 97 DQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLT 156
Query: 151 HSSCPNCRE 159
+S+CP CR+
Sbjct: 157 NSTCPLCRD 165
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 44 ILAGLVFAFGLIFSLVLRSIV--RCAQRCSRSFAFETPDEA-------VPRLGSKELKKS 94
++ + F +IF +V SI R + SRS F + D + RL ++ L
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAE 110
Query: 95 AFHQIPKVVYGSGST---SSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSH 151
A P +Y +C++CL EF D +R++P C HVFH C+DVWL H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170
Query: 152 SSCPNCR 158
S+CP CR
Sbjct: 171 STCPLCR 177
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 75 AFETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPK 134
++E ++ L ++ L + ++P + S T C+ICL + G R LPK
Sbjct: 135 SYEEREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPK 194
Query: 135 CNHVFHVKCIDVWLLSHSSCPNCREVI 161
C+H FH+ C+D WL+ H SCP CR+ +
Sbjct: 195 CDHTFHLVCVDKWLIRHGSCPICRQAV 221
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
DC +CL EF K+R+LPKC+H FHV+CID WLLSHS+CP CR
Sbjct: 125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 168
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 71 SRSFAFETP-----DEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMD 125
+R++ F+ P D + + + L + I Y TDCS+CL EF +
Sbjct: 167 ARNWDFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEE 226
Query: 126 GVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
+R+LPKC H FH+ CID WL SH++CP CR I
Sbjct: 227 EETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV 263
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L K+A +P + + S DCS+CL +F +R+LPKC H FH+ CID WL
Sbjct: 98 LDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQ 157
Query: 151 HSSCPNCREVIA 162
H++CP CR+ ++
Sbjct: 158 HATCPLCRDRVS 169
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
DC++CL EF K+R+LPKC+H FH+ CID WLLSHS+CP CR
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L + PK++Y + A+ C+ICLG++ +R LP CNH+FH+KCID WL
Sbjct: 122 LDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRL 181
Query: 151 HSSCPNCR 158
+ +CP CR
Sbjct: 182 NPTCPVCR 189
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 86 LGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCID 145
+ S+ L + +P + S T +C++CL EF + RVLP C H FHV CID
Sbjct: 90 VASRGLDPNVIKSLPVFTF-SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCID 148
Query: 146 VWLLSHSSCPNCREVI 161
+W SHS+CP CR ++
Sbjct: 149 MWFHSHSTCPLCRSLV 164
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 14/93 (15%)
Query: 84 PRLGSKELKKSAFHQIP----KVVYGSGS----------TSSAATDCSICLGEFMDGVKV 129
P L S+ L +S IP K Y + +CS+CL EF D K+
Sbjct: 92 PELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKL 151
Query: 130 RVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
R++P C+H+FH+ CIDVWL ++++CP CR ++
Sbjct: 152 RIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVS 184
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVW 147
SK L + ++IPKV TS CS+CL +F G VR LP C+H+FH+ CID W
Sbjct: 150 SKGLTGDSLNRIPKVRITD--TSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKW 207
Query: 148 LLSHSSCPNCR 158
L H+SCP CR
Sbjct: 208 LRRHASCPLCR 218
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSS---AATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
++ L S P +Y T +C+ICL EF D +R+LPKC+HVFH CI
Sbjct: 97 ARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCI 156
Query: 145 DVWLLSHSSCPNCREVIA 162
D WL +H +CP CR +A
Sbjct: 157 DAWLEAHVTCPVCRANLA 174
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVW 147
SK L + ++IPKV TS CS+CL +F G VR LP C+H+FH+ CID W
Sbjct: 174 SKGLTGDSLNRIPKVRITD--TSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKW 231
Query: 148 LLSHSSCPNCRE 159
L H+SCP CR
Sbjct: 232 LRRHASCPLCRR 243
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 76 FETPDEAVPRLGSKELKKSAFHQIPKV-VYGSGSTSSAATD--CSICLGEFMDGVKVRVL 132
FE GSK L +IPK+ + G + ++ CS+CL +F G VR L
Sbjct: 148 FEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSL 207
Query: 133 PKCNHVFHVKCIDVWLLSHSSCPNCR 158
P C+H+FH+ CID WL H SCP CR
Sbjct: 208 PHCHHMFHLPCIDNWLFRHGSCPMCR 233
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L K +P V+Y T + T CS+CLG++ K++ +P C H FH++CID+WL S
Sbjct: 73 LSKDIREMLPIVIYKESFTVND-TQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTS 131
Query: 151 HSSCPNCR 158
H++CP CR
Sbjct: 132 HTTCPLCR 139
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 40 IMVFILAGLVFAFGL--IFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKE---LKKS 94
I++ + +VFAF I ++V+ I++C + ++ + KE +K
Sbjct: 8 ILIHLGINIVFAFFFFGISAVVVSCIIKCYNTHDDDHDHDNNNDGHVSITIKERVGIKPY 67
Query: 95 AFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSC 154
IP V + + +C +CL E DG K RVLP C+H FHV+CID WL S+S+C
Sbjct: 68 VLRSIPIVDFNTKDFK-YVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTC 126
Query: 155 PNCRE 159
P CR+
Sbjct: 127 PICRK 131
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSS---AATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
++ L P VY T A +C+ICL EF D +R+LPKC+HVFH CI
Sbjct: 93 ARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCI 152
Query: 145 DVWLLSHSSCPNCREVIA 162
WL H +CP CR +A
Sbjct: 153 GAWLQGHVTCPVCRTNLA 170
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 91 LKKSAFHQIPKVVYGS---------GSTSSAA-TDCSICLGEFMDGVKVRVLPKCNHVFH 140
L S +P +Y + G TS+A DC++CL EF +G VR LP C H FH
Sbjct: 121 LDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFH 180
Query: 141 VKCIDVWLLSHSSCPNCREVI 161
++CID WL SH +CP CR I
Sbjct: 181 LECIDEWLRSHPNCPLCRTAI 201
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 91 LKKSAFHQIPKVVYGS---------GSTSSAA-TDCSICLGEFMDGVKVRVLPKCNHVFH 140
L S +P +Y + G TS+A DC++CL EF +G VR LP C H FH
Sbjct: 121 LDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFH 180
Query: 141 VKCIDVWLLSHSSCPNCREVI 161
++CID WL SH +CP CR I
Sbjct: 181 LECIDEWLRSHPNCPLCRTAI 201
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 34 SSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKELKK 93
SS +++ + A VF F ++ L R + + + P E + R G L +
Sbjct: 57 SSGVLVLVISLSAVTVFVFPTCIAIRLYDSERFDSAIAAATVMQQPREVMARRG---LDQ 113
Query: 94 SAFHQIPKVVYGSGSTSSAATD--CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSH 151
S K+ G S C ICL E+ VR +P+C+H FHV+CIDVWL H
Sbjct: 114 STIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIH 173
Query: 152 SSCPNCREVIA 162
SCP CR A
Sbjct: 174 GSCPLCRNSCA 184
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
+ +S +P +G+ S +C++CL F +R+LPKC H FHV+C+D WL +
Sbjct: 67 IDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDA 126
Query: 151 HSSCPNCR 158
HS+CP CR
Sbjct: 127 HSTCPLCR 134
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 23 SRNWSRESLTGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDE- 81
S + E T S I++ +L + FA G I S+ +R RC Q + P
Sbjct: 24 SSEFDDEGRTSFSPTTAIIMIVLVSVFFALGCI-SVYMR---RCLQHALGMDSGGGPGNW 79
Query: 82 -AVPRLGSKELKKSAFHQIPKVVYGSGST---SSAATDCSICLGEFMDGVKVRVLPKCNH 137
V + L S P Y + T A +C +CL EF D +R++P+C H
Sbjct: 80 LNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCH 139
Query: 138 VFHVKCIDVWLLSHSSCPNCR 158
VFH CID WL S ++CP CR
Sbjct: 140 VFHPGCIDAWLRSQTTCPLCR 160
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 40 IMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFE-------TPDEAVPRLGSKELK 92
IM L G + A LV+ S R + + ++ P V R+G L
Sbjct: 244 IMCLSLVGPLTALTFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIG---LD 300
Query: 93 KSAFHQIPKVVYGSG---STSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLL 149
+S KV G T S C ICL E+ VR LP+C H FH +CID WL
Sbjct: 301 ESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLK 360
Query: 150 SHSSCPNCR 158
HSSCP CR
Sbjct: 361 LHSSCPVCR 369
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 32 TGSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKEL 91
+ S+DF +L L +F + SL + +RC C R P +L
Sbjct: 28 SHSNDFAANAFLLLIILFCSFICVLSL--HAAIRC---CLRPVLQHVPKP------DPDL 76
Query: 92 KKSAFHQIPKVVYGSG-STSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL-L 149
+ + P +VY G + + +C ICL EF DG +RVL +C H FHV CI WL
Sbjct: 77 EATHPDAPPTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSS 136
Query: 150 SHSSCPNCREVI 161
SHSSCP CR I
Sbjct: 137 SHSSCPTCRTNI 148
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 82 AVPRLGSKELKKSAFHQIPKVVYGSGS---TSSAATDCSICLGEFMDGVKVRVLPKCNHV 138
A R S+ L K + P +Y +C+ICL EF D +R++P C+H
Sbjct: 91 AFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHA 150
Query: 139 FHVKCIDVWLLSHSSCPNCR 158
FH CIDVWL S S+CP CR
Sbjct: 151 FHASCIDVWLSSRSTCPVCR 170
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L K A +P + + +CS+CL +F D +R+LPKC H FH+ CID WL
Sbjct: 99 LDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQ 158
Query: 151 HSSCPNCREVI 161
H++CP CR +
Sbjct: 159 HATCPLCRNRV 169
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 40 IMVFILAGLVFAFGLIFSLVL--RSIVRCAQRCSRSFA--FETPDEAVPRLGSKELKKSA 95
IM+ +A L ++F+L L R ++R + R F P E +P+ G L +
Sbjct: 31 IMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPVIFRHPFE-MPKRG---LNPTV 86
Query: 96 FHQIPKVVYG-SGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSC 154
+P G + +++AT+C++CL + K R LP C H+FHV C+D WL + S+C
Sbjct: 87 IASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTC 146
Query: 155 PNCR 158
P CR
Sbjct: 147 PVCR 150
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 82 AVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATD--CSICLGEFMDGVKVRVLPKCNHVF 139
A PR + L ++ +IP VY S + CS+CL EF + + R+LPKC H F
Sbjct: 74 ASPR--DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 131
Query: 140 HVKCIDVWLLSHSSCPNCR 158
HV CID W S S+CP CR
Sbjct: 132 HVDCIDTWFRSRSTCPLCR 150
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 38 DTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKELKKS--- 94
+T++ I+ + + ++ + ++ R + F + R KEL +S
Sbjct: 49 ETVIAIIVLAIFISLSMVACFLHKTFYRAEVEAASQEVFHS---RARRGLEKELVESFPI 105
Query: 95 -AFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSS 153
+ ++ + G G +C+ICL EF+D +R +P C+H FH CIDVWL S S+
Sbjct: 106 FLYSEVKGLKIGKG-----GVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQST 160
Query: 154 CPNCR 158
CP CR
Sbjct: 161 CPACR 165
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L K +P V+Y S + CS+CLG++ K++ +P C H FH++CID+WL S
Sbjct: 87 LSKDIREMLPVVIYKE-SFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTS 145
Query: 151 HSSCPNCR 158
H++CP CR
Sbjct: 146 HTTCPLCR 153
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 74 FAFETPDEA----VPRLGSKELKKSAFHQIP----KVVYGSGSTSSAATDCSICLGEFMD 125
F FE DE+ V LG E F ++P +V Y SS + CSICL ++
Sbjct: 80 FDFED-DESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKK 138
Query: 126 GVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+RVLP CNH+FH C+D WL H +CP CR
Sbjct: 139 MDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCR 171
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVW 147
S L ++P+ Y S+ DC +C+ F G R LP+C HVFH KC+D+W
Sbjct: 87 SDGLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLW 146
Query: 148 LLSHSSCPNCREVI 161
L+ S+CP CR+ +
Sbjct: 147 LIKVSTCPICRDRV 160
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L A +P Y + + DC ICL +F +G V+V+P C HVFHV C+D WL S
Sbjct: 116 LDSQAVRSLPVYRY-TKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSS 174
Query: 151 HSSCPNCR 158
+ +CP CR
Sbjct: 175 YVTCPLCR 182
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVW 147
SKEL++ +P VV+ S + + CS+CLG++ K++ +P C H FH+ CID+W
Sbjct: 77 SKELRE----MLPIVVFKE-SFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLW 131
Query: 148 LLSHSSCPNCR 158
L SH++CP CR
Sbjct: 132 LTSHTTCPLCR 142
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
DC++CL EF + K+R+LP C+H FH+ CID WL S+S+CP CR
Sbjct: 142 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 85 RLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
R G+ KSA +P V S C++C+ EF DG V+ +P C HVFH C+
Sbjct: 185 RYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMP-CKHVFHQDCL 243
Query: 145 DVWLLSHSSCPNCR 158
WL H+SCP CR
Sbjct: 244 LPWLELHNSCPVCR 257
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 91 LKKSAFHQIPKVVYGSGS---TSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVW 147
L+K P +Y +C+ICL EF D +R +P C+H FH CIDVW
Sbjct: 95 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 154
Query: 148 LLSHSSCPNCR 158
L S S+CP CR
Sbjct: 155 LSSWSTCPVCR 165
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 84 PRLGSKELKKSAFHQIPKVVYGSG---STSSAATDCSICLGEFMDGVKVRVLPKCNHVFH 140
PR + L A P VY +C +CL EF D +R++P C HVFH
Sbjct: 50 PRRPPRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFH 109
Query: 141 VKCIDVWLLSHSSCPNCR 158
C+D+WL S+CP CR
Sbjct: 110 ADCVDIWLSHSSTCPICR 127
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 94 SAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSS 153
+F + P V G+ CSICL EFMD +R++ CNH FH CID+W H +
Sbjct: 137 ESFPEYPYSVKDHGTDQ-----CSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKT 191
Query: 154 CPNCR 158
CP CR
Sbjct: 192 CPVCR 196
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 29 ESLTGSSDFDTIMVFIL---AGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPR 85
ES G + T+ + +L G+ F + L+ S R +R F P + V
Sbjct: 21 ESSGGGTMIATVFMALLLPCVGMCIVFLIYLFLLWCSTRRRIER----LRFAEPVKPV-- 74
Query: 86 LGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCID 145
K L +IPK+ + + +T+C++CL + G R++P CNH FH C D
Sbjct: 75 -TGKGLSVLELEKIPKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCAD 133
Query: 146 VWLLSHSSCPNCREVIA 162
WL +H+ CP CR +A
Sbjct: 134 TWLSNHTVCPVCRAELA 150
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 75 AFETPDEAVPRLGSKELKKSAFHQIPKV-VYGSGST-SSAATD-CSICLGEFMDGVKVRV 131
AF+ GSK L +IPK+ + G+ +T +S TD CS+CL +F G VR
Sbjct: 152 AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRS 211
Query: 132 LPKCNHVFHVKCIDVWLLSH 151
LP C+H+FH+ CID WLL H
Sbjct: 212 LPHCHHMFHLPCIDNWLLRH 231
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 89 KELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL 148
K L KS+ IP ++ + S + CSICL ++ +G R L +C H FH+ CID WL
Sbjct: 146 KGLSKSSIQNIP--MFYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWL 203
Query: 149 LSHSSCPNCRE 159
L +CP CR+
Sbjct: 204 LRQETCPICRD 214
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 41 MVFILAGLVFAFGLIFSLVLRSIVR-CAQRCSRSFAFETPDEAVPRLGSKELKKSAFHQI 99
+ F LA +F+ L F+L+ I R C R S + +PD + R S L + +
Sbjct: 33 LFFALA--LFSVVLFFALLTLYIHRNCLPRDSINLHASSPDR-LTRCRSGGLDPAEIRSL 89
Query: 100 PKVVYGSGSTSSAATDCS-ICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
P V+ ICLG F +G K++VLP C+H +H +C+D WL + SSCP CR
Sbjct: 90 PVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCR 149
Query: 159 EVI 161
I
Sbjct: 150 VSI 152
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCRE 159
C ICL E++ VR +P+C+H FH KCIDVWL H SCP CR
Sbjct: 316 CPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRN 359
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 96 FH---QIPKVVYGSG--STSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
FH I VV G G T CSICL E+M+ +R++P+C H FHV C+D WL
Sbjct: 111 FHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKL 170
Query: 151 HSSCPNCRE 159
+ SCP CR
Sbjct: 171 NGSCPVCRN 179
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 73 SFAFETPDEAVPRLGSKE-LKKSAFHQI-PKVVYGSGS------TSSAATDCSICLGEFM 124
S PD R G K LK+S + PK++ G G+ S + +C+ICL ++
Sbjct: 81 STGLRLPD--FEREGKKRGLKQSVIETLLPKLLVGQGNHEEDEEKSLESRECAICLSGYV 138
Query: 125 DGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCRE 159
+ RV P C H++H CID WL +H +CP CR+
Sbjct: 139 VNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRK 173
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 100 PKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
P Y S + + T+C+ICL EF D VR++ C H FH CID+W H +CP CR
Sbjct: 87 PVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCR 145
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 112 AATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
A T+C++CL + R+LP C HVFHV C+D WL + S+CP CR
Sbjct: 96 AGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 30/43 (69%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
C ICL E+ VR +P+C+H FHV+CID WL HSSCP CR
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 76 FETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKC 135
FE R G +SA +P + S+ ++C +C EF G + + +P C
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-C 208
Query: 136 NHVFHVKCIDVWLLSHSSCPNCREVI 161
NH++H CI WL+ H+SCP CR+ +
Sbjct: 209 NHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 76 FETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKC 135
FE R G +SA +P + S+ ++C +C EF G + + +P C
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-C 208
Query: 136 NHVFHVKCIDVWLLSHSSCPNCREVI 161
NH++H CI WL+ H+SCP CR+ +
Sbjct: 209 NHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 76 FETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKC 135
FE R G +SA +P + S+ ++C +C EF G + + +P C
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-C 208
Query: 136 NHVFHVKCIDVWLLSHSSCPNCREVI 161
NH++H CI WL+ H+SCP CR+ +
Sbjct: 209 NHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 79 PDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHV 138
P ++ + + + S IP V + + + +C +CL +F+D K RVLP CNH
Sbjct: 43 PSHSLHVIKATGINPSVLLSIPVVSFNANAFKDN-IECVVCLSKFIDEDKARVLPSCNHC 101
Query: 139 FHVKCIDVWLLSHSSCPNCREVI 161
FH D WL S +CPNCR+ +
Sbjct: 102 FHFDFTDTWLHSDYTCPNCRKNV 124
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 34 SSDFDTIMVFILAGLVFAFGLIFSLVLRSIVR--CAQRCSRSFAFETPDEAVPRLGSKEL 91
+SD +++ I+ +F GL S+ R R +Q F + + L
Sbjct: 10 ASDLTLLVITIILFAIFIVGLA-SVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRGL 68
Query: 92 KKSAFHQIPKVVYGSGSTSS---AATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL 148
++ + P +Y +C++C+ EF D +R++P+C HVFH C+ VWL
Sbjct: 69 DEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWL 128
Query: 149 LSHSSCPNCR 158
HS+CP CR
Sbjct: 129 SDHSTCPLCR 138
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 85 RLGSKELKKSAFHQIPKVVYGS---GSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHV 141
R+ + + S +P + S S+S + DC++CL +F ++R+LP C H FH
Sbjct: 83 RVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHA 142
Query: 142 KCIDVWLLSHSSCPNCR 158
CID+WL+S+ +CP CR
Sbjct: 143 DCIDIWLVSNQTCPLCR 159
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 98 QIPKVVYGSGST-SSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPN 156
++P+ + ST + +DC +C F G R LP C HVFH KC+D WLL S+CP
Sbjct: 91 KLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPI 150
Query: 157 CR 158
CR
Sbjct: 151 CR 152
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 40 IMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFET--PDEAVPRLGSKELKKSAFH 97
I++ + G + F ++ + + R A R+ A P+E + G L +S
Sbjct: 242 IILLSIIGPLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNEVIVTTG---LDESIIE 298
Query: 98 QIPKVVYGSGSTSSAATD---CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSC 154
K G D C ICL E+ VR +P+C+H FH +CIDVWL H SC
Sbjct: 299 SYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSC 358
Query: 155 PNCRE 159
P CR
Sbjct: 359 PLCRN 363
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 91 LKKSAFHQIPKVVYGSGST---SSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVW 147
+ K P +Y + +C+ICL EF D +R +P C+H FH CID W
Sbjct: 92 IDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEW 151
Query: 148 LLSHSSCPNCR 158
L S S+CP CR
Sbjct: 152 LSSRSTCPVCR 162
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 7/121 (5%)
Query: 45 LAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSK----ELKKSAFHQIP 100
+ G + FGL F V I C +R E + L S L P
Sbjct: 254 IPGALIVFGL-FCFVYSKISSCIKRRRLVPTPEINNAQAHYLHSSVIVMGLDGPTIESYP 312
Query: 101 KVVYGSGSTSSAATD--CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
K+V G D C+ICL E+ +R +P+C H FH CID WL + +CP CR
Sbjct: 313 KIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372
Query: 159 E 159
Sbjct: 373 N 373
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 10/77 (12%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATD---------CSICLGEFMDGVKVRVLPKCNHVFHV 141
L ++ + PK + S TS+A++D CSICL E+ + +R++P+C H FH+
Sbjct: 105 LDQAVINSYPKFHF-SKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHL 163
Query: 142 KCIDVWLLSHSSCPNCR 158
C+D WL + SCP CR
Sbjct: 164 CCLDAWLKLNGSCPVCR 180
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 82 AVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHV 141
++ + K+++K F +I CSICL E DG ++ + KC HVFH
Sbjct: 98 SIEEMEFKDIEKEGFDEI---------------GCSICLEELEDGHEIIRIKKCRHVFHR 142
Query: 142 KCIDVWLLSHSSCPNCR 158
CID WL + SCPNCR
Sbjct: 143 SCIDSWLKQNRSCPNCR 159
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATD--CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL 148
L + P++V G + CSICL ++ VR +P+CNH FH C+D WL
Sbjct: 67 LDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWL 126
Query: 149 LSHSSCPNCRE 159
+ ++CP CR
Sbjct: 127 RTSATCPLCRN 137
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSSAATD-CSICLGEFMDGVKVRVLPKCNHVFHVKCIDV 146
K L S IP VY + C ICLG + G R L C H FHV+CID+
Sbjct: 109 DKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDM 168
Query: 147 WLLSHSSCPNCR 158
WL SHS+CP CR
Sbjct: 169 WLSSHSTCPLCR 180
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 36 DFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVP---------RL 86
DF + ++F+ +VF + + + + +Q+ A ET + P
Sbjct: 11 DFFSTVLFLFIYMVFPIAITVIFIYKLCIDLSQQPPTEIARETHQNSHPPPDQLQQDIET 70
Query: 87 GSKELKKSA----------FHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCN 136
G L + H+ + + S C ICL EF DG ++ + C
Sbjct: 71 GHVTLPQPQQNIAVGYMTWIHETTILEFKDIKEGSNKIFCPICLEEFEDGHEIIRINMCR 130
Query: 137 HVFHVKCIDVWLLSHSSCPNCR 158
HVFH CID WL + +CPNCR
Sbjct: 131 HVFHRFCIDPWLNQNLTCPNCR 152
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 114 TDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCRE 159
T C ICL E+ V+ LP+C H FH +CID WL H+SCP CR
Sbjct: 262 TLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRN 307
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 108 STSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
S S +C ICL E+ DGV++R LP CNH FH CID WL +S CP C+
Sbjct: 330 SLSPEDAECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCK 379
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 85 RLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
R G+ +K A +P V CS+CL +F G + + +P C H FHV+CI
Sbjct: 234 RQGTPPARKEAVEALPTVKI------MEPLQCSVCLDDFEKGTEAKEMP-CKHKFHVRCI 286
Query: 145 DVWLLSHSSCPNCR 158
WL HSSCP CR
Sbjct: 287 VPWLELHSSCPVCR 300
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 85 RLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
R GS +K +P V S + CSICL +F G + + +P C H FH++CI
Sbjct: 216 RHGSLPARKEVVDNLPTVKI------SESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCI 268
Query: 145 DVWLLSHSSCPNCR 158
WL HSSCP CR
Sbjct: 269 VPWLELHSSCPVCR 282
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 85 RLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
R GS +K +P V S + CSICL +F G + + +P C H FH++CI
Sbjct: 216 RHGSLPARKEVVDNLPTVKI------SESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCI 268
Query: 145 DVWLLSHSSCPNCR 158
WL HSSCP CR
Sbjct: 269 VPWLELHSSCPVCR 282
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 93 KSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHS 152
KS +P+VV G + C+ICL E+ G +P C H FH KC++ WL H+
Sbjct: 87 KSEVENMPRVVIGEDKEKYGGS-CAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLGRHA 144
Query: 153 SCPNCR 158
+CP CR
Sbjct: 145 TCPMCR 150
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 113 ATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
+CS+CL F D ++R L +C H FHV CI+ WL H +CP CR ++
Sbjct: 139 GNECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVS 188
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
C +CLGEF ++ +P C H+FH+ CI +WL SH++CP CR ++
Sbjct: 105 CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVS 151
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+C+ICL EF +R+L C HVFH +CID+W SH +CP CR
Sbjct: 109 ECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCR 152
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
C+ICL + +G K+R + C+H FHV CID WL+ S+CP CR I
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEI 115
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 40 IMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKELKKSAFHQI 99
I+ F + +IF+L++ +++ +R S E ++ + L S
Sbjct: 12 ILWFASVTSLVTISVIFALLIICLLK-RRRFDVSPETENENQGRREPRCQGLSASVIAAF 70
Query: 100 PKVVY----GSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCP 155
P Y +++ +C +CLG V ++VLP C H+F +CI WL SH++CP
Sbjct: 71 PTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLESHATCP 130
Query: 156 NCREV 160
CR +
Sbjct: 131 VCRRL 135
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
C ICL E+ D ++R L C HVFH+ CID WL +CP+CR
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCR 122
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 85 RLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
RL + L F ++ + +GSGS C++CL EF + ++R L C H+FH C+
Sbjct: 79 RLAGEILPVIRFSELTRPGFGSGSDC-----CAVCLHEFENDDEIRRLTNCQHIFHRSCL 133
Query: 145 DVWLLSHS--SCPNCR 158
D W++ ++ +CP CR
Sbjct: 134 DRWMMGYNQMTCPLCR 149
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 76 FETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKC 135
E + R G+ KSA +P+V S + A +C++C F G++ R +P C
Sbjct: 176 IEASGNGIGRSGNPPASKSAIESLPRVEI-SDCHTKAEANCAVCTEVFEAGIEGREMP-C 233
Query: 136 NHVFHVKCIDVWLLSHSSCPNCR 158
H+FH CI WL +SCP CR
Sbjct: 234 KHIFHGDCIVPWLSIRNSCPVCR 256
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 82 AVPRLGSKELKKSA--FHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVF 139
+ P L L SA +++ VV S + C++CL +F KVR LPKC HVF
Sbjct: 50 SAPDLTRHALSTSASLANELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQLPKCGHVF 109
Query: 140 HVKCIDVWLLSHS--SCPNCR 158
H C+D W++ ++ CP CR
Sbjct: 110 HHYCLDRWIVDYNKMKCPVCR 130
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 91 LKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
L + A + + + + S S DCSICL F G + LP C H FH C++ WL +
Sbjct: 178 LTQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLP-CTHSFHSSCLNPWLRA 236
Query: 151 HSSCPNCREVIA 162
CP CR IA
Sbjct: 237 CGDCPCCRRAIA 248
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 27 SRESLTGSSDFDTIMVFILAGLVFA----FGLIF-SLVLRSIVRCAQRCSRSFAFETPDE 81
S E L G +D D + ++++ G + G+ F SL+ S + R
Sbjct: 136 SGEVLKGYADQDEMKLWLIPGFGISSWSIMGITFISLLAMSAILATCFVVRRHQIRQSVR 195
Query: 82 AVPRLGSKE--LKKSAFHQIPKVVY-GSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHV 138
+P G + + +P VY G SS + C+IC+ ++ G K+R+LP C H
Sbjct: 196 DLPHGGQGLSCMPRDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILP-CKHK 254
Query: 139 FHVKCIDVWL-LSHSSCPNCRE 159
+H CID WL S CP C++
Sbjct: 255 YHAVCIDSWLGRCRSFCPVCKQ 276
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 90 ELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLL 149
L H +P + + A C+ICL ++ G +R+LP C H FH+ CID WL
Sbjct: 206 RLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCIDSWLT 264
Query: 150 SH-SSCPNCREVI 161
+SCP C+ I
Sbjct: 265 KWGTSCPVCKHDI 277
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 90 ELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLL 149
L H +P + + A C+ICL ++ G +R+LP C H FH+ CID WL
Sbjct: 206 RLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCIDSWLT 264
Query: 150 SH-SSCPNCREVI 161
+SCP C+ I
Sbjct: 265 KWGTSCPVCKHDI 277
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 97 HQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLL--SHSSC 154
+++ VV S + C++CL +F+ K+R LPKC HVFH +C+D W++ + +C
Sbjct: 66 NELIPVVRFSDLLTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITC 125
Query: 155 PNCR 158
P CR
Sbjct: 126 PICR 129
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 105 GSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
+ + S+ C++CL E +G K+R L C H FH CID WL S CP CR I
Sbjct: 51 AAENDDSSPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQI 107
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 115 DCSICLGEFMD-GVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+C+ICL EF + + +R+L C HVFH +CID WL S+ +CP CR
Sbjct: 113 ECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCR 157
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 87 GSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDV 146
E ++ ++PK + + +C ICL EF G +VR LP C H FHV+CID
Sbjct: 208 AQTEAVEALIQELPK--FRLKAVPDDCGECLICLEEFHIGHEVRGLP-CAHNFHVECIDQ 264
Query: 147 WLLSHSSCPNCR 158
WL + CP CR
Sbjct: 265 WLRLNVKCPRCR 276
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
C ICL + D +VR LP C+HVFHV C+D WL +++CP C+ +
Sbjct: 355 CCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCKNEVG 400
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 111 SAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
S +CSICL + DGV++R LP C H FH C+D WL +++CP C+
Sbjct: 318 SEDAECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCK 364
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 26/136 (19%)
Query: 25 NWSRESLT--GSSDFDTIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEA 82
N S +++T S+D D++ L G F ++L+ + A P+
Sbjct: 153 NTSNQTITVQNSADMDSVPAGSLGDYFIGPG--FEMLLQRL-----------AENDPN-- 197
Query: 83 VPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVK 142
R G+ KK A + V CS+CL +F G + +++P C H FH
Sbjct: 198 --RYGTPPAKKEAVEALATVKI------EETLQCSVCLDDFEIGTEAKLMP-CTHKFHSD 248
Query: 143 CIDVWLLSHSSCPNCR 158
C+ WL HSSCP CR
Sbjct: 249 CLLPWLELHSSCPVCR 264
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS-HSSCPNCRE 159
C+ICL +++ G K+RVLP C+H FHV C+D WL+S + CP C+
Sbjct: 232 CAICLEDYIVGDKLRVLP-CSHKFHVACVDSWLISWRTFCPVCKR 275
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 91 LKKSAFHQIPK---------VVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHV 141
L + FH++PK + G ++ + C ICL + G K+R+LP C+H FHV
Sbjct: 200 LNGNDFHRMPKSMIIRMPTTIFNGICDEATTSILCCICLENYEKGDKLRILP-CHHKFHV 258
Query: 142 KCIDVWLLSHSS-CPNCRE 159
C+D+WL S CP C+
Sbjct: 259 ACVDLWLGQRKSFCPVCKR 277
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 81 EAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFH 140
E + + K + + + +Y T+S+ C+ICL EF DG KV LP C H F
Sbjct: 142 EETNNISLRPANKLVVNSLARKIYKK--TTSSTERCTICLEEFNDGTKVMTLP-CGHEFD 198
Query: 141 VKCIDVWLLSHSSCPNCR 158
+C+ W ++ CP CR
Sbjct: 199 DECVLTWFETNHDCPLCR 216
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 106 SGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
+ ++ C+ICL +G K+R + C+H FHV CID WL S CP CR I
Sbjct: 60 TAEEKHSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEI 115
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 101 KVVYGSGSTSSAATD--CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
K++ + +S A D C ICL ++ + +VR LP C+H FH+KC+D WL S CP C+
Sbjct: 272 KLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
Query: 159 E 159
+
Sbjct: 331 Q 331
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 101 KVVYGSGSTSSAATD--CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
K++ + +S A D C ICL ++ + +VR LP C+H FH+KC+D WL S CP C+
Sbjct: 272 KLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
Query: 159 E 159
+
Sbjct: 331 Q 331
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 87 GSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDV 146
G KS+ +P + S+ + C +C EF + + +P C+H++H CI
Sbjct: 157 GPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVP 215
Query: 147 WLLSHSSCPNCREVI 161
WL+ H+SCP CR+ +
Sbjct: 216 WLVQHNSCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 87 GSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDV 146
G KS+ +P + S+ + C +C EF + + +P C+H++H CI
Sbjct: 157 GPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVP 215
Query: 147 WLLSHSSCPNCREVI 161
WL+ H+SCP CR+ +
Sbjct: 216 WLVQHNSCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 87 GSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDV 146
G KS+ +P + S+ + C +C EF + + +P C+H++H CI
Sbjct: 157 GPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVP 215
Query: 147 WLLSHSSCPNCREVI 161
WL+ H+SCP CR+ +
Sbjct: 216 WLVQHNSCPVCRKEL 230
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
C+IC +F+ G R LP CNH++H CI WL SH+SCP CR
Sbjct: 96 CAICREDFVVGESARRLP-CNHLYHNDCIIPWLTSHNSCPLCR 137
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 29/138 (21%)
Query: 39 TIMVFILAGLVFAFGLIFSLVLRSIVRCAQRCSRSFAFETPDEAVPRLGSKELKKSAFHQ 98
T +++ +A L+ I + +LR SRS + + A P + S+ +K+S
Sbjct: 13 TQLLYKMAVLITVLRWILAWILRYR-------SRSRSTSSSTSACPSISSQAIKES---- 61
Query: 99 IPKVVYGSGSTSSAA---TDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL------- 148
+ + + S A C++CLG+ DG +VR L C+H+FH +CID WL
Sbjct: 62 LSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGG 121
Query: 149 --------LSHSSCPNCR 158
+H +CP CR
Sbjct: 122 DENNEGEEDNHRTCPLCR 139
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+C ICL + DG ++R LP C H FH C+D WL +++CP C+
Sbjct: 352 ECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCK 394
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 27/46 (58%)
Query: 113 ATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
A C ICL +F VRVL +C HVFHV CID W +CP CR
Sbjct: 90 ADVCVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICR 135
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 85 RLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
R G + + +P V ++ + C++C+ EF+ G LP C H++H CI
Sbjct: 193 RPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELP-CKHIYHKDCI 251
Query: 145 DVWLLSHSSCPNCR 158
WL ++SCP CR
Sbjct: 252 VPWLRLNNSCPICR 265
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 106 SGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
G+ A DC ICL E GV LP C+HVFH CI WL + SCP CR
Sbjct: 164 KGTCLVPALDCPICLTELSSGVSRMKLP-CSHVFHRDCIMTWLKKNPSCPICR 215
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+C ICL + DG ++R LP C H FH C+D WL +++CP C+
Sbjct: 281 ECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCK 323
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 109 TSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCRE 159
T + +C ICL ++ D +VR LP C+H FH KC+D WL S CP C++
Sbjct: 290 TVTDDPECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQ 339
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 109 TSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCRE 159
T + +C ICL ++ D +VR LP C+H FH KC+D WL S CP C++
Sbjct: 290 TVTDDPECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQ 339
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSSAATD---CSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
S+ LK+S + + + +GS S D CSIC E++DG ++ +P C H++HV C+
Sbjct: 448 SRSLKQSIYQETDE----TGSISLYKDDDIKCSICQEEYVDGDELGTIP-CQHMYHVSCV 502
Query: 145 DVWLLSHSSCPNCR 158
WL + CP C+
Sbjct: 503 QQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 88 SKELKKSAFHQIPKVVYGSGSTSSAATD---CSICLGEFMDGVKVRVLPKCNHVFHVKCI 144
S+ LK+S + + + +GS S D CSIC E++DG ++ +P C H++HV C+
Sbjct: 448 SRSLKQSIYQETDE----TGSISLYKDDDIKCSICQEEYVDGDELGTIP-CQHMYHVSCV 502
Query: 145 DVWLLSHSSCPNCR 158
WL + CP C+
Sbjct: 503 QQWLRMKNWCPICK 516
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLL-SHSSCPNCREVI 161
C ICL EF V LP+C H+FH+ CI+ WLL H +CP CR +
Sbjct: 62 CPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFV 108
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 72 RSFAFETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRV 131
+S + +V +GS +P +Y + S S + C ICL E+ + +R
Sbjct: 447 QSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLY-TKSQSEDPSQCYICLVEYEEADSIRT 505
Query: 132 LPKCNHVFHVKCIDVWLLS-HSSCPNCR 158
LP C+H FH C+D WL H CP CR
Sbjct: 506 LP-CHHEFHKTCVDKWLKEIHRVCPLCR 532
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
CS+CL +F G++ + +P C H FH C+ WL HSSCP CR ++
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLL 269
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
CS+CL +F G++ + +P C H FH C+ WL HSSCP CR ++
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLL 269
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
CS+CL +F G++ + +P C H FH C+ WL HSSCP CR ++
Sbjct: 225 CSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLL 269
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL---------LSHSSCPNCR 158
C++CLG+ D ++R L C HVFH CID WL +H +CP CR
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCR 134
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 93 KSAFHQIPKVVYGS----GSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWL 148
K++ +Q+ + YGS S + CSIC E+ G +V L C H +HVKC+ WL
Sbjct: 421 KTSIYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVGRL-HCEHTYHVKCVQEWL 479
Query: 149 LSHSSCPNCR 158
S CP C+
Sbjct: 480 RIKSWCPICK 489
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 87 GSKELKKSAFHQIPKVVY-GSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCID 145
G + K +P VY G S + C+IC+ ++ G +R+LP C H +H CID
Sbjct: 86 GHSRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRVGEILRILP-CKHKYHAVCID 144
Query: 146 VWL-LSHSSCPNCRE 159
WL S CP C++
Sbjct: 145 SWLGRCRSFCPVCKQ 159
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 76 FETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKC 135
E + R G+ KSA +P+V S A +C++C F + R +P C
Sbjct: 160 IEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEA-NCAVCTEIFETETEAREMP-C 217
Query: 136 NHVFHVKCIDVWLLSHSSCPNCR 158
H+FH CI WL +SCP CR
Sbjct: 218 KHLFHDDCIVPWLSIRNSCPVCR 240
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 17/83 (20%)
Query: 92 KKSAFHQIPKVVYGSG----------------STSSAATDCSICLGEFMDGVKVRVLPKC 135
K AFH K + G G + + DC ICL + DG ++ LP C
Sbjct: 267 KFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALP-C 325
Query: 136 NHVFHVKCIDVWLLSHSSCPNCR 158
NH FH CI WL ++CP C+
Sbjct: 326 NHHFHSTCIVKWLKMRATCPLCK 348
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVIA 162
C ICL ++ + ++R LP C+H FH +C+D WL ++SCP C+ +
Sbjct: 363 CCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCKSEVG 408
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 99 IPKVVYGS-GSTSSAATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS-HSSCPN 156
+P +++ S ++ A C+ICL ++ G K+R+LP C H FH C+D WL S + CP
Sbjct: 214 MPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLP-CCHKFHAACVDSWLTSWRTFCPV 272
Query: 157 CR 158
C+
Sbjct: 273 CK 274
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 93 KSAFHQIPKVVYGSGSTSS--AATDCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLS 150
K ++P +++ A +C IC + G K++ LP C H FH C+ WL
Sbjct: 205 KEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELP-CKHTFHPPCLKPWLDE 263
Query: 151 HSSCPNCR 158
H+SCP CR
Sbjct: 264 HNSCPICR 271
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
CSIC E++DG +V LP C H +HV C WL + CP C+
Sbjct: 468 CSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
CSIC E++DG +V LP C H +HV C WL + CP C+
Sbjct: 468 CSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICK 509
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 80 DEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVF 139
D P SK + KS +I K+ +TSS C ICL EF +G +V LP C H F
Sbjct: 28 DGYNPTPASKLVVKSLARKIYKM-----TTSSTGEMCIICLEEFSEGRRVVTLP-CGHDF 81
Query: 140 HVKCIDVWLLSHSSCPNCR 158
+C+ W ++ SCP CR
Sbjct: 82 DDECVLKWFETNHSCPLCR 100
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
DC ICL + DG ++ LP CNH FH CI WL +++CP C+
Sbjct: 291 DCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMNATCPLCK 333
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 84 PRLGSKELKKSAFHQIPKVVYGSGSTSSAATD----CSICLGEFMDGVKVRVLPKCNHVF 139
P G K+++ + + S + S T+ CS+CL + G VR LP C H F
Sbjct: 175 PENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLP-CLHQF 233
Query: 140 HVKCIDVWLLSHSSCPNCR 158
H CID WL +CP C+
Sbjct: 234 HAGCIDPWLRQQGTCPVCK 252
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+C IC E+ LP C H +H++C++ WL H+SCP CR
Sbjct: 480 ECVICFEEWSKSDMETELP-CKHKYHLECVEKWLKIHTSCPQCR 522
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 72 RSFAFETPDEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRV 131
+S + +V +GS +P +Y + S S + C ICL E+ + +R
Sbjct: 447 QSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLY-TKSQSEDPSQCYICLVEYEEADSIRT 505
Query: 132 LPKCNHVFHVKCIDVWLLS-HSS-CPNCR 158
LP C+H FH C+D WL HS CP CR
Sbjct: 506 LP-CHHEFHKTCVDKWLKEIHSRVCPLCR 533
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 80 DEAVPRLGSKELKKSAFHQIPKVVYGSGSTSSAATDCSICLGEFMDGVKVRVLPKCNHVF 139
D V +G KS + +P V+ + C++C E G K LP CNH +
Sbjct: 273 DAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLP-CNHKY 331
Query: 140 HVKCIDVWLLSHSSCPNCR 158
H +CI WL ++CP CR
Sbjct: 332 HSECIVPWLKVRNTCPVCR 350
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 115 DCSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
+C ICL + D ++R LP C H FH C+D WL +++CP C+
Sbjct: 324 ECCICLSAYEDETELRELP-CGHHFHCGCVDKWLYINATCPLCK 366
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCR 158
C++C +F+ G R LP C+H++H CI WL H+SCP CR
Sbjct: 169 CAVCKEDFIIGESARRLP-CSHIYHSDCIVPWLSDHNSCPLCR 210
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 110 SSAATDCSICLGEFMD--GVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREV 160
T CSICL +F + + +LP C H+FH CI WL SCP CR V
Sbjct: 131 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCRRV 183
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 89 KELKKSAFHQIPKVVY-----------GSGSTSSAATD----------CSICLGEFMDGV 127
K L K ++ +PK GS SS T CS+CL +F
Sbjct: 124 KHLTKETYNPVPKSTLLRSLSLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKE 183
Query: 128 KVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
V + P C H+FH +CI WL + CP CR VI
Sbjct: 184 TVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVI 216
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 89 KELKKSAFHQIPKVVY-----------GSGSTSSAATD----------CSICLGEFMDGV 127
K L K ++ +PK GS SS T CS+CL +F
Sbjct: 96 KHLTKETYNPVPKSTLLRSLSLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKE 155
Query: 128 KVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREVI 161
V + P C H+FH +CI WL + CP CR VI
Sbjct: 156 TVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVI 188
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 110 SSAATDCSICLGEFMD--GVKVRVLPKCNHVFHVKCIDVWLLSHSSCPNCREV 160
T CSICL +F + + +LP C H+FH CI WL SCP CR V
Sbjct: 147 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCRRV 199
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 116 CSICLGEFMDGVKVRVLPKCNHVFHVKCIDVWLLSHS--SCPNCR 158
C++CL +F + ++R L C H+FH C+D W++ ++ +CP CR
Sbjct: 89 CAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPLCR 133