Miyakogusa Predicted Gene

Lj1g3v1147490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1147490.1 Non Chatacterized Hit- tr|I1KB73|I1KB73_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.13,0,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; Glutathione
S-transferase (GST), C,CUFF.26887.1
         (404 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40660.1 | Symbols:  | Nucleic acid-binding, OB-fold-like pro...   421   e-118
AT4G13780.1 | Symbols:  | methionine--tRNA ligase, putative / me...   167   1e-41
AT3G59980.1 | Symbols:  | Nucleic acid-binding, OB-fold-like pro...   115   5e-26

>AT2G40660.1 | Symbols:  | Nucleic acid-binding, OB-fold-like
           protein | chr2:16966011-16968866 FORWARD LENGTH=389
          Length = 389

 Score =  421 bits (1083), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/403 (58%), Positives = 301/403 (74%), Gaps = 16/403 (3%)

Query: 4   VDSRKKSVVL-ALCKHLQLDSSVIPADNFDNDIKTLYLNIAAASGQEVN-HSVEVLKWVA 61
           +DS+ K ++L ALCKH  LD         ++DIKTLY N+  ASG+EV+  + +VLKW+ 
Sbjct: 1   MDSKAKQMILSALCKHFSLDPEPFVGGAGESDIKTLYSNVLKASGKEVSAQNNDVLKWLD 60

Query: 62  FAEAFPVALDASFENLKKLNDELSDKSVLLGNGLKPSEADVVVFSVIHSSLISISDTDKE 121
           FAE F       F  L+KLN EL+ KSVLLGNGL PS ADV VFS +HSS++ +SD+DKE
Sbjct: 61  FAEGFSSDSKDWFSALEKLNLELATKSVLLGNGLTPSAADVAVFSALHSSVLGLSDSDKE 120

Query: 122 KLPHVLRWMDYIQHKQELIGLFEEILLQKPDFDPPVTKSIGAVEADSKTNKTEQSIKNTN 181
           K+PHV+RW++YIQ+K+EL  LF  I ++ P+F   V K    VE +S + K  + +K  +
Sbjct: 121 KVPHVIRWVNYIQNKEELSTLFAPIPVKLPEFSFEVPKPAIKVETNSNSKKAAEGVKPVD 180

Query: 182 KPEADISKDKNKAEIKEKSTGDKQPSKPKAKSADKEGAEKQPSKPKAKSSDKEVAEKDNE 241
           KP+        + ++  K T   +P +PK  +A ++ A+K+    K K ++ E A+K+ E
Sbjct: 181 KPDV-------QPQLGTKKT---EPEEPKKNAAKEKDAKKE----KKKPAEPEPAKKEAE 226

Query: 242 VSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCTPDDLTNRRVVL 301
           +SVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGE K+RQVVSGLAK+C+P+DLTNR V L
Sbjct: 227 LSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEDKVRQVVSGLAKFCSPEDLTNRLVAL 286

Query: 302 ITNVKPGKLRDVMSEGLVLCASNEGPTVVEPLLPPEGAKIGERVTFSGFDGKPEDVLNPK 361
           ITNVKPGKLRDVMS+GLVLCAS+E  +VVEPLLPP GAK GERV+FSG +GKPEDVLNPK
Sbjct: 287 ITNVKPGKLRDVMSQGLVLCASSEDHSVVEPLLPPAGAKPGERVSFSGIEGKPEDVLNPK 346

Query: 362 KKQLDKITPYLFTDDKGVATFKGIPFMTSGGPCTSSISRATVK 404
           KKQL+KITP L+TD+ GVAT+KGI FMTS GPCTSSI +AT+K
Sbjct: 347 KKQLEKITPGLYTDENGVATYKGIQFMTSAGPCTSSIPKATIK 389


>AT4G13780.1 | Symbols:  | methionine--tRNA ligase, putative /
           methionyl-tRNA synthetase, putative / MetRS, putative |
           chr4:7993366-7998433 REVERSE LENGTH=797
          Length = 797

 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 137/221 (61%), Gaps = 10/221 (4%)

Query: 194 AEIKEKSTG---DKQPSKPKAKSADK------EGAEKQPSKPKAKSSDKEVAEKDNEVSV 244
           A  +EK  G   D++     A  AD+        A+KQ +  K     K     D E+++
Sbjct: 577 ARYREKFAGSQSDRRARDEAANLADQLNKTKLSDAKKQKASSKGGGKPKPQPAADREITM 636

Query: 245 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCTPDDLTNRRVVLITN 304
           + L+I+VG I KA KHP AD+L VEEIDVG  ++R VVSGL KY   +++ NR V ++ N
Sbjct: 637 ARLDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCN 696

Query: 305 VKPGKLRDVMSEGLVLCASNEGPTVVEPLLPPEGAKIGERVTFSGFDGKPEDVLNPKKKQ 364
           +KP K+RD++S+ +VL AS+   + VE + PP+ A IGERVTF GF+G+P+DVLNPKKK 
Sbjct: 697 LKPAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKV 756

Query: 365 LDKITPYLFTDDKGVATFKGIPFMTSGGPC-TSSISRATVK 404
            + +   L T +  VA +K +PF TS G C  SSIS  T++
Sbjct: 757 WETLLVDLNTKENLVACYKDVPFTTSAGVCKVSSISNGTIR 797


>AT3G59980.1 | Symbols:  | Nucleic acid-binding, OB-fold-like
           protein | chr3:22154528-22155570 REVERSE LENGTH=273
          Length = 273

 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 8/175 (4%)

Query: 229 KSSDKEVAEKDNEVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKY 288
           K S+ +  E++ + + +LL+I+VG I KAW+H  ADSL VEE+D+GEA+ R + SGL KY
Sbjct: 91  KKSESQKEEENVKETANLLDIKVGRIVKAWQHEEADSLYVEEVDIGEAEPRIICSGLVKY 150

Query: 289 CTPDDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEGPTVVEPLLPPEGAKIGERVTFS 348
              D L    VV++ N+KP  +R V S G++L AS+     VE L+PPEG+  G+RV F 
Sbjct: 151 VPLDLLQGASVVVLANLKPRNMRGVKSCGMLLAASDAAHENVELLVPPEGSVPGDRVWF- 209

Query: 349 GFDGKPEDVLNP-------KKKQLDKITPYLFTDDKGVATFKGIPFMTSGGPCTS 396
           G +   E +  P       KKK  + + P L TD  GV+  K     TS G  TS
Sbjct: 210 GNEEDLEQLPEPAPPNKVQKKKMWELVQPLLKTDASGVSMLKEHLMRTSSGLVTS 264