Miyakogusa Predicted Gene
- Lj1g3v1123910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1123910.1 CUFF.26849.1
(502 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05180.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 116 4e-26
AT5G05180.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 110 2e-24
AT2G30500.2 | Symbols: | Kinase interacting (KIP1-like) family ... 69 9e-12
AT2G30500.1 | Symbols: | Kinase interacting (KIP1-like) family ... 69 9e-12
AT3G10880.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 63 6e-10
>AT5G05180.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G10880.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:1536924-1538318
FORWARD LENGTH=432
Length = 432
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 122/252 (48%), Gaps = 59/252 (23%)
Query: 275 EVQKLKAEILDSQAQFSVEKDQLISGIVSLTEVKMQLNSRLKEWESRSNELEIKLSIYEA 334
E+ KL+ + D Q FS+EK +L+ I KM++
Sbjct: 211 EISKLREMLCDCQQNFSIEKTKLVDQIKHSEAEKMEM----------------------- 247
Query: 335 EKLKQVELHASQQRALQDEISSLKEELGLRSHEIEGVNKEFDRHKQNYDMLMTERDGANA 394
+ K+VEL A EIS+LK +L R IE +NK+FD+HK YDMLM E+DG A
Sbjct: 248 -QRKEVELQA--------EISALKTDLATRGEHIEALNKDFDKHKLRYDMLMAEKDGVCA 298
Query: 395 TIDKLKAELSFRDNQIADVERKLVEIRTQQAELIS------------------------- 429
+D LKAE+ RD QI +E +L ++ +Q EL+S
Sbjct: 299 EVDNLKAEMRSRDIQIQQMEEQLNQLVYKQTELVSESGNAKNTVEELKAVVKELEIEVEL 358
Query: 430 GSETXXXXXXXXXXXXXXXXXXXARQNAVISDRDEQKREAIRQLCFSLEHYRSGYQELVR 489
S+ ++NA IS +E+KREAIRQLCFSL+HY+SGY++L+
Sbjct: 359 QSKAKKTVEELRATVWEMEKHAELQRNA-ISQGEEEKREAIRQLCFSLDHYKSGYKQLLW 417
Query: 490 VFTG-HRRHAVT 500
+G +++H T
Sbjct: 418 YLSGNNQQHQTT 429
>AT5G05180.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G10880.1); Has 50151 Blast hits to 28081
proteins in 1838 species: Archae - 860; Bacteria - 6013;
Metazoa - 25867; Fungi - 3836; Plants - 2236; Viruses -
90; Other Eukaryotes - 11249 (source: NCBI BLink). |
chr5:1536924-1538318 FORWARD LENGTH=408
Length = 408
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 37/197 (18%)
Query: 333 EAEKL----KQVELHASQQRALQDEISSLKEELGLRSHEIEGVNKEFDRHKQNYDMLMTE 388
EAEK+ K+VEL A EIS+LK +L R IE +NK+FD+HK YDMLM E
Sbjct: 217 EAEKMEMQRKEVELQA--------EISALKTDLATRGEHIEALNKDFDKHKLRYDMLMAE 268
Query: 389 RDGANATIDKLKAELSFRDNQIADVERKLVEIRTQQAELISGS----------------- 431
+DG A +D LKAE+ RD QI +E +L ++ +Q EL+S S
Sbjct: 269 KDGVCAEVDNLKAEMRSRDIQIQQMEEQLNQLVYKQTELVSESGNAKNTVEELKAVVKEL 328
Query: 432 --ETXXXXXXXXXXXXXXXXXXXARQNA-----VISDRDEQKREAIRQLCFSLEHYRSGY 484
E ++A IS +E+KREAIRQLCFSL+HY+SGY
Sbjct: 329 EIEVELQSKAKKTVEELRATVWEMEKHAELQRNAISQGEEEKREAIRQLCFSLDHYKSGY 388
Query: 485 QELVRVFTG-HRRHAVT 500
++L+ +G +++H T
Sbjct: 389 KQLLWYLSGNNQQHQTT 405
>AT2G30500.2 | Symbols: | Kinase interacting (KIP1-like) family
protein | chr2:12998329-13000072 REVERSE LENGTH=517
Length = 517
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 120/274 (43%), Gaps = 67/274 (24%)
Query: 233 LQGQLKTAQEDIDSLKYQLEIETQE---FEDRIARYKANETNHELEVQKLKAEILDSQAQ 289
LQ +L+ AQ D D+ +L E +E ++R+A K + + + E++ LK + D++ +
Sbjct: 303 LQHELELAQRDADTYINKLNAEKKEVLKLQERLAMVKTSLQDRDNEIRALKTAVSDAEQK 362
Query: 290 FSVEKDQLISGIVSLTEVKMQLNSRLKEWESRSNELEIKLSIYEAEKLKQVELHASQQR- 348
EK Q+ + + E + QL +L+E ES I+L I E + + +L ++
Sbjct: 363 IFPEKAQIKGEMSKMLEERSQLGEQLRELESH-----IRL-IKEEKAETEEKLRGGTEKI 416
Query: 349 -ALQDEISSLKEELGLRSHEIEGVNKEFDRHKQNYDMLMTERDGANATIDKLKAELSFRD 407
++DE + L+EE+G R +I KE ++H + M
Sbjct: 417 SGMRDESNVLREEIGKREEKI----KETEKHMEELHM----------------------- 449
Query: 408 NQIADVERKLVEIRTQQAELISGSETXXXXXXXXXXXXXXXXXXXARQNAVISDRDEQKR 467
+ V +R + +EL E R S+ EQKR
Sbjct: 450 --------EQVRLRRRSSELTEEVE---------------------RTRVSASEMAEQKR 480
Query: 468 EAIRQLCFSLEHYRSGYQELVRVFTGHRRHAVTA 501
EAIRQLC SL+HYR GY L RV GH+ V
Sbjct: 481 EAIRQLCMSLDHYRDGYDRLWRVVAGHKSKRVVV 514
>AT2G30500.1 | Symbols: | Kinase interacting (KIP1-like) family
protein | chr2:12998329-13000072 REVERSE LENGTH=517
Length = 517
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 120/274 (43%), Gaps = 67/274 (24%)
Query: 233 LQGQLKTAQEDIDSLKYQLEIETQE---FEDRIARYKANETNHELEVQKLKAEILDSQAQ 289
LQ +L+ AQ D D+ +L E +E ++R+A K + + + E++ LK + D++ +
Sbjct: 303 LQHELELAQRDADTYINKLNAEKKEVLKLQERLAMVKTSLQDRDNEIRALKTAVSDAEQK 362
Query: 290 FSVEKDQLISGIVSLTEVKMQLNSRLKEWESRSNELEIKLSIYEAEKLKQVELHASQQR- 348
EK Q+ + + E + QL +L+E ES I+L I E + + +L ++
Sbjct: 363 IFPEKAQIKGEMSKMLEERSQLGEQLRELESH-----IRL-IKEEKAETEEKLRGGTEKI 416
Query: 349 -ALQDEISSLKEELGLRSHEIEGVNKEFDRHKQNYDMLMTERDGANATIDKLKAELSFRD 407
++DE + L+EE+G R +I KE ++H + M
Sbjct: 417 SGMRDESNVLREEIGKREEKI----KETEKHMEELHM----------------------- 449
Query: 408 NQIADVERKLVEIRTQQAELISGSETXXXXXXXXXXXXXXXXXXXARQNAVISDRDEQKR 467
+ V +R + +EL E R S+ EQKR
Sbjct: 450 --------EQVRLRRRSSELTEEVE---------------------RTRVSASEMAEQKR 480
Query: 468 EAIRQLCFSLEHYRSGYQELVRVFTGHRRHAVTA 501
EAIRQLC SL+HYR GY L RV GH+ V
Sbjct: 481 EAIRQLCMSLDHYRDGYDRLWRVVAGHKSKRVVV 514
>AT3G10880.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G05180.1); Has 15699 Blast hits to 11378
proteins in 1134 species: Archae - 391; Bacteria - 2054;
Metazoa - 6851; Fungi - 1354; Plants - 1096; Viruses -
119; Other Eukaryotes - 3834 (source: NCBI BLink). |
chr3:3406092-3407131 FORWARD LENGTH=319
Length = 319
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 317 EWESRSNELEIKLSIYEAEKLKQVELHASQQRA------LQDEISSLKEELGLRSHEIEG 370
E E+ ELE + E EK V+L + + L+ E+ +KE LG+ E+
Sbjct: 149 ELETARRELEARNIAIETEKRYVVDLESKLSDSVYKIEKLESELDEVKECLGVSEAEVSK 208
Query: 371 VNKEFDRHKQNYDMLMTERDGANATIDKLKAELSFRDNQIADVERKLVEIRT-QQAELIS 429
+ + K L T D A+ +D L+AEL R+ QI +E L ++ + E+ S
Sbjct: 209 LMEMLSECKNEKSKLQT--DNADDLLDSLRAELRSREIQIEQMEEYLNQVLCLNETEIKS 266
Query: 430 GSETXXXXXXXXXXXXXXXXXXXARQNAVISDRDEQKREAIRQLCFSLEHY 480
SET Q VI++R+E+KREAIRQLCFSL+HY
Sbjct: 267 ESETDKNIVEELRAKVEVLEKQVELQRNVITEREEEKREAIRQLCFSLDHY 317