Miyakogusa Predicted Gene

Lj1g3v1112820.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1112820.3 Non Chatacterized Hit- tr|O49425|O49425_ARATH
Putative uncharacterized protein AT4g19980 OS=Arabidop,46.21,9e-18,no
description,Acyl-CoA N-acyltransferase; GLUCOSAMINE 6-PHOSPHATE
N-ACETYLTRANSFERASE,NULL; seg,NUL,CUFF.26842.3
         (269 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19985.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) supe...   192   2e-49
AT1G32070.3 | Symbols: ATNSI, NSI | nuclear shuttle interacting ...    59   5e-09
AT1G32070.2 | Symbols: ATNSI, NSI | nuclear shuttle interacting ...    58   5e-09
AT1G32070.1 | Symbols: ATNSI, NSI | nuclear shuttle interacting ...    58   5e-09

>AT4G19985.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT)
           superfamily protein | chr4:10830542-10831711 REVERSE
           LENGTH=237
          Length = 237

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/233 (46%), Positives = 140/233 (60%), Gaps = 35/233 (15%)

Query: 23  SMELKWVTRRITKTSQLENNNHNILRPLFPVHISTDPRHIDPHRLRDLCAACNHSCHRFP 82
           SMEL+W  RR +      +N  + L    P++IST  + I+   LR+L + CNHSC+R  
Sbjct: 14  SMELRWARRRKS------DNAASALPRSIPIYISTLKKDINLEELRNLYSLCNHSCNR-- 65

Query: 83  NLLHPHNRVQPEPEPVDIHKLRIALSHSAVLVSVFCKPHHVD------------------ 124
            L    + V+   + VD+ KLR A+S S V+VSVFCKP HVD                  
Sbjct: 66  -LSEKDSNVE---KIVDMKKLRRAISRSDVIVSVFCKPQHVDVDDAVLYSEEESLSSSLY 121

Query: 125 -----GXXXXXXXXXXXXXXXTPVTPSRDQLVGFGRAVSDLGLTASIYDVMVIPPLRRMG 179
                                 P+TPS  QLVGFGRA SD GLTASI+D+MV+P L+RMG
Sbjct: 122 TSEFGRQNKDDSFLGDLFQNAVPLTPSNGQLVGFGRAYSDYGLTASIHDLMVLPSLQRMG 181

Query: 180 IGRMIVKKILRMLTNRDIYDIAALCSEDERLFFKACGFGSDILSSTTMMYMRT 232
           IG++IV +I+R+LT+RDIYDIAALC EDER FFKACGFG D + STTMM+ ++
Sbjct: 182 IGKLIVNRIVRLLTSRDIYDIAALCFEDERPFFKACGFGDDRMGSTTMMFTKS 234


>AT1G32070.3 | Symbols: ATNSI, NSI | nuclear shuttle interacting |
           chr1:11534851-11536289 REVERSE LENGTH=257
          Length = 257

 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 43/72 (59%)

Query: 149 QLVGFGRAVSDLGLTASIYDVMVIPPLRRMGIGRMIVKKILRMLTNRDIYDIAALCSEDE 208
           +L+G  RA SD    A+I+DV+V P  +  G+G+ +V+K++R L  RDI +I+       
Sbjct: 174 KLIGMARATSDHAFNATIWDVLVDPEYQGQGLGKALVEKLVRALLQRDIGNISLFADSQV 233

Query: 209 RLFFKACGFGSD 220
             F++  GF +D
Sbjct: 234 VDFYQNLGFEAD 245


>AT1G32070.2 | Symbols: ATNSI, NSI | nuclear shuttle interacting |
           chr1:11534851-11536289 REVERSE LENGTH=258
          Length = 258

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 43/72 (59%)

Query: 149 QLVGFGRAVSDLGLTASIYDVMVIPPLRRMGIGRMIVKKILRMLTNRDIYDIAALCSEDE 208
           +L+G  RA SD    A+I+DV+V P  +  G+G+ +V+K++R L  RDI +I+       
Sbjct: 175 KLIGMARATSDHAFNATIWDVLVDPEYQGQGLGKALVEKLVRALLQRDIGNISLFADSQV 234

Query: 209 RLFFKACGFGSD 220
             F++  GF +D
Sbjct: 235 VDFYQNLGFEAD 246


>AT1G32070.1 | Symbols: ATNSI, NSI | nuclear shuttle interacting |
           chr1:11534851-11536289 REVERSE LENGTH=257
          Length = 257

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 43/72 (59%)

Query: 149 QLVGFGRAVSDLGLTASIYDVMVIPPLRRMGIGRMIVKKILRMLTNRDIYDIAALCSEDE 208
           +L+G  RA SD    A+I+DV+V P  +  G+G+ +V+K++R L  RDI +I+       
Sbjct: 174 KLIGMARATSDHAFNATIWDVLVDPEYQGQGLGKALVEKLVRALLQRDIGNISLFADSQV 233

Query: 209 RLFFKACGFGSD 220
             F++  GF +D
Sbjct: 234 VDFYQNLGFEAD 245