Miyakogusa Predicted Gene

Lj1g3v1112820.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1112820.2 Non Chatacterized Hit- tr|G7K644|G7K644_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.24,0.000000000001,no description,NULL; seg,NULL; C2
domain (Calcium/lipid-binding domain, CaLB),C2
calcium/lipid-bindi,CUFF.26842.2
         (316 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40815.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   157   1e-38
AT4G01200.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    60   2e-09
AT2G33320.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    55   9e-08
AT1G04540.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    51   1e-06
AT3G04360.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    50   1e-06

>AT2G40815.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr2:17034736-17036110 REVERSE
           LENGTH=367
          Length = 367

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/268 (39%), Positives = 142/268 (52%), Gaps = 38/268 (14%)

Query: 1   MGITWIEVCLISAHGLQHS----TSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTK 56
           MG   +E+C+ISA GL+      +SL K QWYAVGW+D + KYCT +D S   NPVW+TK
Sbjct: 1   MGKILVEICMISARGLRVGIGIGSSLLKHQWYAVGWLDPEDKYCTTIDASRADNPVWRTK 60

Query: 57  FAIPVDDSEQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVK----QAENFERQG 112
           FA  +DDS      LAL VEVY  +P+F  ++LHGSAT+ LKEFL K    Q+ +     
Sbjct: 61  FATLLDDSTIQDSKLALQVEVYSREPLFLRKRLHGSATVSLKEFLTKYKQQQSSSKAVIE 120

Query: 113 EVGSYQLRKRNSSKPRGFIDILIHISEGKIDPNSHTGSKEGIMLLDHGDNTKLSEEGELR 172
           E GSYQLRK NSSKP+GF+D+ I IS  + D    TG   G+ML    +N+  +  G+  
Sbjct: 121 ETGSYQLRKTNSSKPQGFVDVSIRISAEREDFGGFTGDFGGVML---SNNSDYNTSGQDY 177

Query: 173 QAYPQKQPQASIHELESHVQTNIQDSCSEPFNSTIYYDPYVGEPSYLPGRTKTR------ 226
            A   + P A + +             S PF+    Y+ +   P+  P  T T       
Sbjct: 178 MAGSSQYPFAPMDQ-------------SNPFSVPPSYNHHSSMPN--PPMTNTNPQMQQP 222

Query: 227 ----TAXXXXXXSNVGYIPTFLP--IND 248
                        N GY+PT++P  +ND
Sbjct: 223 YYPPPMQPPPPPMNSGYMPTYIPKSVND 250


>AT4G01200.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr4:506783-507535 REVERSE
           LENGTH=250
          Length = 250

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 6   IEVCLISAHGLQHSTSLWKR-QWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDS 64
           +E+ LISA GL+  T   +R Q YA  W+D  SK  T++D  G+ NP+W  KF   V   
Sbjct: 7   LEINLISAQGLKEPTGKLRRLQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQVSPE 66

Query: 65  EQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLVKQAENFERQGEVGSYQLRKRNS 124
             + +   +++E+Y +   +  + L G+   ++  FL   A        + + Q+R R S
Sbjct: 67  FLSSETSGVSIEIYAVG--YLRDHLIGTVRFLVSNFLPTAAVKVP---SLVALQIR-RPS 120

Query: 125 SKPRGFIDILIHI 137
            K  G ++I   +
Sbjct: 121 GKFHGVLNIAAMV 133


>AT2G33320.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr2:14119526-14121334 REVERSE
           LENGTH=602
          Length = 602

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 16/148 (10%)

Query: 6   IEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDSE 65
           +E+ +ISA  L   +   K + YAV W+  + K  T+VD +G  NP W  KF   V +  
Sbjct: 10  LELNIISAQDLAPVSR--KMKTYAVAWVHSERKLTTRVDYTGGGNPTWNDKFVFRVSEDF 67

Query: 66  QNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFL-------VKQAENFERQGEVG--- 115
                 A+ VE+Y +   +F +   G+  +++   +        +  E + R    G   
Sbjct: 68  LYADTSAVVVEIYALH--WFRDVHVGTVRVLISNLIPPNRRPGYRSNEEYRRTPPPGMRF 125

Query: 116 -SYQLRKRNSSKPRGFIDILIHISEGKI 142
            + Q+R R S +P+G ++I + I +G +
Sbjct: 126 VALQVR-RPSGRPQGILNIGVGILDGSM 152


>AT1G04540.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:1237256-1239061 FORWARD
           LENGTH=601
          Length = 601

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 26/172 (15%)

Query: 6   IEVCLISAHGLQHSTSLWKRQWYAVGWIDHDSKYCTKVDDSGNANPVWKTKFAIPVDDSE 65
           +E+ +ISA  L  +    K + YAV W+  + K  T+VD +G  NP W  KF   V++  
Sbjct: 11  LELNIISAQDL--APVARKTKTYAVAWVHSERKLTTRVDYNGGTNPTWNDKFVFRVNEEF 68

Query: 66  QNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFL-------VKQAEN-FERQGEVG-- 115
                 A+ +E+Y +   +F +   G+  +++   +        + + N + R    G  
Sbjct: 69  LYADTSAVVIEIYALH--WFRDVHVGTVRVLISNLIPPNRRPGYRTSNNEYRRTPPPGMR 126

Query: 116 --SYQLRKRNSSKPRGFIDILIHISEGKIDPNSHTGSKEGIMLLDHGDNTKL 165
             + Q+R R S +P+G ++I +    G ID     GS   + L  H D++ +
Sbjct: 127 FVALQVR-RTSGRPQGILNIGV----GLID-----GSMRSMPLYTHMDSSAV 168


>AT3G04360.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr3:1157025-1158200 REVERSE
           LENGTH=391
          Length = 391

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 6   IEVCLISAHGLQHSTSLWKRQWYAVGWIDHD--SKYCTKVDDSGNANPVWKTKFAIPVDD 63
           +E+ LISA  L   +   K   Y+V WI+ D   K  T+VD S  ANP+W  KF   V+D
Sbjct: 11  LEINLISAQDLAPVSRNMKT--YSVAWINTDPMRKLTTRVDQSNRANPIWNEKFVFRVND 68

Query: 64  SEQNIQDLALNVEVYGIDPVFFTEKLHGSATIVLKEFLV 102
               +   A+ +E+Y     +  + L G+  ++L +   
Sbjct: 69  KILYVDASAIVIEIYA--AAWAKDALVGTVNVLLSDLFA 105