Miyakogusa Predicted Gene

Lj1g3v1091050.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1091050.3 Non Chatacterized Hit- tr|I1KB28|I1KB28_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42212
PE,47.8,0,seg,NULL; coiled-coil,NULL,CUFF.26838.3
         (1171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49490.1 | Symbols:  | unknown protein; Has 722 Blast hits to...    84   8e-16

>AT3G49490.1 | Symbols:  | unknown protein; Has 722 Blast hits to
           186 proteins in 64 species: Archae - 0; Bacteria - 30;
           Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0;
           Other Eukaryotes - 534 (source: NCBI BLink). |
           chr3:18344926-18348648 REVERSE LENGTH=953
          Length = 953

 Score = 83.6 bits (205), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 29/198 (14%)

Query: 715 VQLLVDTLQNMSELLLYHCSYDGCELKERDCNILKKVIGNLSTCALKNAEEITTAPECLF 774
           V  +V+ + N+SE+L+Y C  +G  LK      L KV+ NL+ C  K  +  TTA E   
Sbjct: 507 VSSVVNAMHNLSEVLVYECFNNGSWLKLEQLENLDKVVDNLTKCLKKITDNKTTAGEATL 566

Query: 775 HQPENSRCTGGPCELQQNTSFKRPQLTKIEQEISEIKLENQFEEANQHFSSERPHWKLPV 834
                      P +    T    P +  + +  + +  + Q       FS  +P     V
Sbjct: 567 -----------PTQSMHVTC---PNVVDLHEAATGVAKDFQ------RFSV-KPLDSFGV 605

Query: 835 CMSPRFDAETTKADSMTKDLKRILSENFHDEEEDS-QTDLYKNLWLEAEAALCSVSYRAR 893
                   E    + MT+ +K IL+ NF D EE+  QT LYKNLWLE EAALCS +  AR
Sbjct: 606 -------KEPVDKNEMTQSIKNILASNFPDGEENHPQTLLYKNLWLETEAALCSTTCMAR 658

Query: 894 YNQMKIEMEKRSYNQRDM 911
           Y+++K E+     N +++
Sbjct: 659 YHRIKNEIGNLKLNNKEI 676