Miyakogusa Predicted Gene
- Lj1g3v1089780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1089780.1 Non Chatacterized Hit- tr|I1LYQ1|I1LYQ1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,52.33,2e-19,
,CUFF.26781.1
(158 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27660.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 147 2e-36
AT5G54150.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 129 6e-31
AT5G54148.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 118 2e-27
AT4G28690.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 99 1e-21
AT2G20310.1 | Symbols: RIN13 | RPM1 interacting protein 13 | chr... 89 9e-19
>AT4G27660.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins
in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10;
Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink). | chr4:13817249-13818027 REVERSE
LENGTH=182
Length = 182
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 95/136 (69%), Gaps = 6/136 (4%)
Query: 18 SPVRAVVCVRKKEDTKRFEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEISVV 77
+P+R + C++ ++D K FEE EDCFIL FDP +S + KLS ++ DDD +++V
Sbjct: 41 TPLRGIFCLKTRQDMKIFEEKEDCFILDFDPNDSFDARKLS--DSPASECDDD---VAIV 95
Query: 78 AEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWT-ELAVPHCDA 136
EKGQVACRD+PH RHLC+KFPF ++ H S+C+ CYCYVCD APC YWT A PHC+A
Sbjct: 96 HEKGQVACRDFPHPRHLCLKFPFESSQHSSHCNQCYCYVCDVVAPCAYWTASFATPHCEA 155
Query: 137 DSSASWKERRKMKKEF 152
++ WK RK+ ++
Sbjct: 156 LENSKWKPIRKLYRDL 171
>AT5G54150.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi
- 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5
(source: NCBI BLink). | chr5:21977461-21978237 REVERSE
LENGTH=160
Length = 160
Score = 129 bits (325), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 83/125 (66%), Gaps = 12/125 (9%)
Query: 16 EESPVRAVVCVRKKEDTKRFEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEIS 75
E SP+R ++CV+ + D KRFE+TEDCFIL F+P++S ++ +LS ++
Sbjct: 31 EGSPLRGILCVKTRRDMKRFEKTEDCFILDFNPFDSFDVKRLSFSLDK---------DLE 81
Query: 76 VVAEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWTELAVPHCD 135
++ E GQVACRDYPH RHLC+ FPF +T + ++CD+CYC+VCD APC W HC+
Sbjct: 82 IIHESGQVACRDYPHPRHLCLNFPFGSTSNATHCDLCYCHVCDKPAPCALWMS---SHCN 138
Query: 136 ADSSA 140
A + +
Sbjct: 139 ASADS 143
>AT5G54148.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G54150.1); Has 104 Blast hits to 102 proteins
in 23 species: Archae - 0; Bacteria - 0; Metazoa - 11;
Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink). | chr5:21976465-21977032 REVERSE
LENGTH=116
Length = 116
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 22/128 (17%)
Query: 16 EESPVRAVVCVRKKEDTKRFEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEIS 75
+++P+ + C++ ++D KRFEETEDCFIL FDP++S ++ KL+ DD E
Sbjct: 7 DDTPLVGIFCLKTRQDMKRFEETEDCFILDFDPFDSFDVKKLTFT--------DDVRE-- 56
Query: 76 VVAEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWTELAVPHCD 135
DYPH RH C+ FPF +TP+ S+CD+CYCYVCD APC WT ++ HC+
Sbjct: 57 -----------DYPHPRHFCLNFPFGSTPNSSHCDLCYCYVCDKPAPCAEWT-ISTSHCN 104
Query: 136 ADSSASWK 143
A SA W
Sbjct: 105 AYDSALWN 112
>AT4G28690.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: RPM1 interacting protein 13 (TAIR:AT2G20310.1); Has
455 Blast hits to 438 proteins in 127 species: Archae -
0; Bacteria - 18; Metazoa - 148; Fungi - 91; Plants -
136; Viruses - 3; Other Eukaryotes - 59 (source: NCBI
BLink). | chr4:14159093-14160876 FORWARD LENGTH=448
Length = 448
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 23/147 (15%)
Query: 16 EESPVRAVVCVRKKEDTKRFEETEDCFILGFDPYES---IELCKLSLDETNNHRNDDDAA 72
E+ P++ V + + + ++ +DC IL FDP IE C ET+
Sbjct: 36 EKKPIKGTVLLNPTVENE--DDDDDCVILDFDPTAKETVIETC-----ETDG-------- 80
Query: 73 EISVVAEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWTELAVP 132
+ VV +KG+VACRD+PH RH C K+PF +T HQ++C+MC+CYVCD+ APC YW +
Sbjct: 81 -VLVVGQKGEVACRDFPHPRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGIS 139
Query: 133 ---HCDA-DSSASWKERRKMKKEFDII 155
HC A D +W ++R+ + +++
Sbjct: 140 NTDHCHANDKEKTWNDQRECIRTGNML 166
>AT2G20310.1 | Symbols: RIN13 | RPM1 interacting protein 13 |
chr2:8761328-8763083 REVERSE LENGTH=430
Length = 430
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 12/116 (10%)
Query: 35 FEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEISVVAEKGQVACRDYPHSRHL 94
E+ +DC IL DP ++ E + D+ ++ VV +KG++ACRD+PH RH
Sbjct: 72 LEDDDDCVILDCDPDKTRETTSVDDDD---------DDDVLVVGQKGEIACRDFPHPRHS 122
Query: 95 CIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYW--TELAVPHCDA-DSSASWKERRK 147
C K+ F +T H+ YCDMC+CYVCD APC YW ++ HC A D WK +R+
Sbjct: 123 CAKYAFNSTSHEKYCDMCHCYVCDIRAPCPYWCIAVSSIDHCHANDKEKIWKNQRE 178