Miyakogusa Predicted Gene

Lj1g3v1089780.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1089780.1 Non Chatacterized Hit- tr|I1LYQ1|I1LYQ1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,52.33,2e-19,
,CUFF.26781.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27660.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   147   2e-36
AT5G54150.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   129   6e-31
AT5G54148.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   118   2e-27
AT4G28690.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    99   1e-21
AT2G20310.1 | Symbols: RIN13 | RPM1 interacting protein 13 | chr...    89   9e-19

>AT4G27660.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins
           in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10;
           Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes -
           5 (source: NCBI BLink). | chr4:13817249-13818027 REVERSE
           LENGTH=182
          Length = 182

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 69/136 (50%), Positives = 95/136 (69%), Gaps = 6/136 (4%)

Query: 18  SPVRAVVCVRKKEDTKRFEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEISVV 77
           +P+R + C++ ++D K FEE EDCFIL FDP +S +  KLS  ++     DDD   +++V
Sbjct: 41  TPLRGIFCLKTRQDMKIFEEKEDCFILDFDPNDSFDARKLS--DSPASECDDD---VAIV 95

Query: 78  AEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWT-ELAVPHCDA 136
            EKGQVACRD+PH RHLC+KFPF ++ H S+C+ CYCYVCD  APC YWT   A PHC+A
Sbjct: 96  HEKGQVACRDFPHPRHLCLKFPFESSQHSSHCNQCYCYVCDVVAPCAYWTASFATPHCEA 155

Query: 137 DSSASWKERRKMKKEF 152
             ++ WK  RK+ ++ 
Sbjct: 156 LENSKWKPIRKLYRDL 171


>AT5G54150.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in
           23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi
           - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5
           (source: NCBI BLink). | chr5:21977461-21978237 REVERSE
           LENGTH=160
          Length = 160

 Score =  129 bits (325), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 83/125 (66%), Gaps = 12/125 (9%)

Query: 16  EESPVRAVVCVRKKEDTKRFEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEIS 75
           E SP+R ++CV+ + D KRFE+TEDCFIL F+P++S ++ +LS              ++ 
Sbjct: 31  EGSPLRGILCVKTRRDMKRFEKTEDCFILDFNPFDSFDVKRLSFSLDK---------DLE 81

Query: 76  VVAEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWTELAVPHCD 135
           ++ E GQVACRDYPH RHLC+ FPF +T + ++CD+CYC+VCD  APC  W      HC+
Sbjct: 82  IIHESGQVACRDYPHPRHLCLNFPFGSTSNATHCDLCYCHVCDKPAPCALWMS---SHCN 138

Query: 136 ADSSA 140
           A + +
Sbjct: 139 ASADS 143


>AT5G54148.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G54150.1); Has 104 Blast hits to 102 proteins
           in 23 species: Archae - 0; Bacteria - 0; Metazoa - 11;
           Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes -
           5 (source: NCBI BLink). | chr5:21976465-21977032 REVERSE
           LENGTH=116
          Length = 116

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 22/128 (17%)

Query: 16  EESPVRAVVCVRKKEDTKRFEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEIS 75
           +++P+  + C++ ++D KRFEETEDCFIL FDP++S ++ KL+          DD  E  
Sbjct: 7   DDTPLVGIFCLKTRQDMKRFEETEDCFILDFDPFDSFDVKKLTFT--------DDVRE-- 56

Query: 76  VVAEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWTELAVPHCD 135
                      DYPH RH C+ FPF +TP+ S+CD+CYCYVCD  APC  WT ++  HC+
Sbjct: 57  -----------DYPHPRHFCLNFPFGSTPNSSHCDLCYCYVCDKPAPCAEWT-ISTSHCN 104

Query: 136 ADSSASWK 143
           A  SA W 
Sbjct: 105 AYDSALWN 112


>AT4G28690.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: RPM1 interacting protein 13 (TAIR:AT2G20310.1); Has
           455 Blast hits to 438 proteins in 127 species: Archae -
           0; Bacteria - 18; Metazoa - 148; Fungi - 91; Plants -
           136; Viruses - 3; Other Eukaryotes - 59 (source: NCBI
           BLink). | chr4:14159093-14160876 FORWARD LENGTH=448
          Length = 448

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 23/147 (15%)

Query: 16  EESPVRAVVCVRKKEDTKRFEETEDCFILGFDPYES---IELCKLSLDETNNHRNDDDAA 72
           E+ P++  V +    + +  ++ +DC IL FDP      IE C     ET+         
Sbjct: 36  EKKPIKGTVLLNPTVENE--DDDDDCVILDFDPTAKETVIETC-----ETDG-------- 80

Query: 73  EISVVAEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYWTELAVP 132
            + VV +KG+VACRD+PH RH C K+PF +T HQ++C+MC+CYVCD+ APC YW    + 
Sbjct: 81  -VLVVGQKGEVACRDFPHPRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGIS 139

Query: 133 ---HCDA-DSSASWKERRKMKKEFDII 155
              HC A D   +W ++R+  +  +++
Sbjct: 140 NTDHCHANDKEKTWNDQRECIRTGNML 166


>AT2G20310.1 | Symbols: RIN13 | RPM1 interacting protein 13 |
           chr2:8761328-8763083 REVERSE LENGTH=430
          Length = 430

 Score = 89.4 bits (220), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 12/116 (10%)

Query: 35  FEETEDCFILGFDPYESIELCKLSLDETNNHRNDDDAAEISVVAEKGQVACRDYPHSRHL 94
            E+ +DC IL  DP ++ E   +  D+           ++ VV +KG++ACRD+PH RH 
Sbjct: 72  LEDDDDCVILDCDPDKTRETTSVDDDD---------DDDVLVVGQKGEIACRDFPHPRHS 122

Query: 95  CIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYW--TELAVPHCDA-DSSASWKERRK 147
           C K+ F +T H+ YCDMC+CYVCD  APC YW     ++ HC A D    WK +R+
Sbjct: 123 CAKYAFNSTSHEKYCDMCHCYVCDIRAPCPYWCIAVSSIDHCHANDKEKIWKNQRE 178