Miyakogusa Predicted Gene
- Lj1g3v1079330.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1079330.1 tr|G7JHV9|G7JHV9_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_4g118380 PE=4 SV=1,71.43,0.0000000002,F-box
domain,F-box domain, cyclin-like; FBOX,F-box domain, cyclin-like; no
description,NULL; coiled-,CUFF.26746.1
(527 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23880.1 | Symbols: | F-box and associated interaction domai... 94 2e-19
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 83 4e-16
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 81 1e-15
AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction ... 81 2e-15
AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction ... 81 2e-15
AT3G08750.1 | Symbols: | F-box and associated interaction domai... 73 6e-13
AT3G21410.1 | Symbols: | F-box and associated interaction domai... 68 2e-11
AT4G04690.1 | Symbols: | F-box and associated interaction domai... 67 4e-11
AT4G22390.1 | Symbols: | F-box associated ubiquitination effect... 66 6e-11
AT1G77650.1 | Symbols: | F-box associated ubiquitination effect... 63 5e-10
AT3G17530.1 | Symbols: | F-box and associated interaction domai... 62 7e-10
AT3G17280.1 | Symbols: | F-box and associated interaction domai... 61 2e-09
AT3G16580.1 | Symbols: | F-box and associated interaction domai... 57 3e-08
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 56 6e-08
AT3G49980.1 | Symbols: | F-box and associated interaction domai... 56 7e-08
AT3G17570.1 | Symbols: | F-box and associated interaction domai... 56 8e-08
AT5G10340.1 | Symbols: | F-box family protein | chr5:3253122-32... 55 1e-07
AT3G44120.1 | Symbols: | F-box and associated interaction domai... 55 1e-07
AT1G32430.1 | Symbols: | F-box and associated interaction domai... 53 5e-07
AT3G22700.1 | Symbols: | F-box and associated interaction domai... 53 5e-07
AT3G10430.1 | Symbols: | F-box and associated interaction domai... 53 7e-07
AT1G11270.2 | Symbols: | F-box and associated interaction domai... 52 1e-06
AT1G11270.1 | Symbols: | F-box and associated interaction domai... 52 1e-06
AT1G47765.1 | Symbols: | F-box and associated interaction domai... 52 1e-06
AT1G15015.1 | Symbols: | F-box family protein | chr1:5172340-51... 51 2e-06
AT1G12190.1 | Symbols: | F-box and associated interaction domai... 51 2e-06
AT3G20710.1 | Symbols: | F-box family protein | chr3:7237911-72... 51 2e-06
AT1G47790.1 | Symbols: | F-box and associated interaction domai... 50 3e-06
AT3G22350.2 | Symbols: | F-box and associated interaction domai... 50 4e-06
AT1G11270.3 | Symbols: | F-box and associated interaction domai... 50 5e-06
AT3G10240.1 | Symbols: | F-box and associated interaction domai... 50 5e-06
AT3G22350.1 | Symbols: | F-box and associated interaction domai... 50 5e-06
AT1G50870.1 | Symbols: | F-box and associated interaction domai... 50 5e-06
AT3G16590.1 | Symbols: | F-box and associated interaction domai... 49 7e-06
AT3G51171.1 | Symbols: | F-box and associated interaction domai... 49 8e-06
AT2G17830.1 | Symbols: | F-box and associated interaction domai... 49 8e-06
AT2G14710.1 | Symbols: | F-box family protein | chr2:6298936-63... 49 1e-05
>AT3G23880.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8622061-8623155
REVERSE LENGTH=364
Length = 364
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 133/324 (41%), Gaps = 70/324 (21%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP E++ EILLRLPV+SL RFKCVC+SW LIS+ FA H + L+ +
Sbjct: 14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALI------------LETS 61
Query: 70 KXXXXXXXXXXXFVT--LNLPPPCKSRDHNS-----------------LYFLGSCRGFML 110
K T +L C +N+ +G+C G +
Sbjct: 62 KATTSTKSPYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVC 121
Query: 111 LAYDYNRQVIVWNPSTGFYKQILSFSDFMLDS-----LYGFGYDNSTDDYFLVLIGLIWV 165
DY++ + +WNP+ +Q LS SD YGFGYD S DDY +V +
Sbjct: 122 FHVDYDKSLYLWNPTIKL-QQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVAL----- 175
Query: 166 KAIIQAFSVKTNSCDFKYVNAQYRD---------LGYHYRHGVFLNNSLHWLVXXXXXXX 216
+ Q VK + + +R + R G+++N +L+
Sbjct: 176 --LQQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLN-------WAA 226
Query: 217 XXXXXXLVVIAYDLLEKSLSEIPLSPELAKPVLTAEGAPKFYHVRVLGGCLSL-CYKGGR 275
+I+YD+ E+P PV G + L GCLS+ CY G
Sbjct: 227 TSSSSSWTIISYDMSRDEFKELP------GPVCCGRGCFTM-TLGDLRGCLSMVCYCKGA 279
Query: 276 RDRAEIWVMKEYKVQSSWTKAFVV 299
A++WVMKE+ SW+K +
Sbjct: 280 --NADVWVMKEFGEVYSWSKLLSI 301
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD LENGTH=427
Length = 427
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 142/348 (40%), Gaps = 76/348 (21%)
Query: 4 EKTNP---TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDL-----NA 55
EK +P LP E+I EILLRLP +S+ RF+CV + L SDP FA+ H DL +
Sbjct: 27 EKASPESLVLPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESV 86
Query: 56 APTHRLLL----------------------------PCLD---------KNKXXXXXXXX 78
HR L+ P D +N
Sbjct: 87 RSLHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDD 146
Query: 79 XXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPSTGFYKQILS---- 134
+ LN KS N + +GS G + ++ V ++NP+TG K++
Sbjct: 147 RRVMLKLN----AKSYRRNWVEIVGSSNGLVCISPGEG-AVFLYNPTTGDSKRLPENFRP 201
Query: 135 -FSDFMLDSL--YGFGYDNSTDDYFLVLIGLIWVKAIIQA--FSVKTNSCDFKYVNAQYR 189
++ D+ YGFG+D TDDY LV + + + I+ A +S+K +S + N Y
Sbjct: 202 KSVEYERDNFQTYGFGFDGLTDDYKLVKL-VATSEDILDASVYSLKADSW-RRICNLNYE 259
Query: 190 DLGYHYRHGVFLNNSLHWLVXXXXXXXXXXXXXLVVIAYDLLEKSLSEIPLSPELAKPVL 249
Y GV N ++HW+ VV+A+D+ + E+P+ E
Sbjct: 260 HNDGSYTSGVHFNGAIHWVFTESRHNQR------VVVAFDIQTEEFREMPVPDE------ 307
Query: 250 TAEGAPKFYHVRVLGGCLS-LCYKGGRRD-RAEIWVMKEYKVQSSWTK 295
AE + V+G LC D +IWVM EY SW++
Sbjct: 308 -AEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSR 354
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE LENGTH=360
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP EL EIL+RL ++ L RF+CVC +W LI+DP F E++ D++ A + DKN
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAK----FVSFYDKN 60
Query: 70 KXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPSTGFY 129
+T L P + + C G + + N ++VWNP + +
Sbjct: 61 -FYMLDVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLK-NHTLMVWNPFSKQF 118
Query: 130 KQILSFSDFMLDSLYGFGYDNSTDDYFLVLIGLIWVKAIIQAFSVKTNSCDFKYVNAQYR 189
K + + + ++ GFGYD DDY +V + F +T S + + Y
Sbjct: 119 KIVPNPGIYQDSNILGFGYDPVHDDYKVVTFIDRLDVSTAHVFEFRTGSWG-ESLRISYP 177
Query: 190 DLGYHYRHGVFLNNSLHWLV 209
D Y R G FL+ L+W+
Sbjct: 178 DWHYRDRRGTFLDQYLYWIA 197
>AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 141/325 (43%), Gaps = 58/325 (17%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLL-----L 63
T+P +++ +I LRLP ++L+R + + + LI+DP F ESH HR+L L
Sbjct: 3 TIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHL-------HRVLQTGDHL 55
Query: 64 PCLDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWN 123
L + ++ P K ++ GS G + L+ + + V+N
Sbjct: 56 MILLRGALRLYSVDLDSLDSVSDVEHPMKRGGPTEVF--GSSNGLIGLS-NSPTDLAVFN 112
Query: 124 PSTGFYKQILSFSDFMLDS-------LYGFGYDNSTDDYFLVLIGLIWVKA--------- 167
PST ++ S + D YG GYD+ +DDY +V + + +
Sbjct: 113 PSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFP 172
Query: 168 -IIQAFSVKTNSCD-FKYVNAQYRDLGYHYRH-------GVFLNNSLHWLVXXXXXXXXX 218
++ FS+K NS + V + + L Y Y H GV NSLHW++
Sbjct: 173 YEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPG---- 228
Query: 219 XXXXLVVIAYDLLEK---SLSEIPLSPELAKPVLTAEGAPKF-YHVRVLGGCLSLCYKGG 274
+IA++L+ + +L E + + P A G + VL GCL L
Sbjct: 229 ------LIAFNLIVRFDLALEEFEI---VRFPEAVANGNVDIQMDIGVLDGCLCLMCNYD 279
Query: 275 RRDRAEIWVMKEYKVQSSWTKAFVV 299
+ ++W+MKEY V+ SWTK F V
Sbjct: 280 -QSYVDVWMMKEYNVRDSWTKVFTV 303
>AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 141/325 (43%), Gaps = 58/325 (17%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLL-----L 63
T+P +++ +I LRLP ++L+R + + + LI+DP F ESH HR+L L
Sbjct: 3 TIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHL-------HRVLQTGDHL 55
Query: 64 PCLDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWN 123
L + ++ P K ++ GS G + L+ + + V+N
Sbjct: 56 MILLRGALRLYSVDLDSLDSVSDVEHPMKRGGPTEVF--GSSNGLIGLS-NSPTDLAVFN 112
Query: 124 PSTGFYKQILSFSDFMLDS-------LYGFGYDNSTDDYFLVLIGLIWVKA--------- 167
PST ++ S + D YG GYD+ +DDY +V + + +
Sbjct: 113 PSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFP 172
Query: 168 -IIQAFSVKTNSCD-FKYVNAQYRDLGYHYRH-------GVFLNNSLHWLVXXXXXXXXX 218
++ FS+K NS + V + + L Y Y H GV NSLHW++
Sbjct: 173 YEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPG---- 228
Query: 219 XXXXLVVIAYDLLEK---SLSEIPLSPELAKPVLTAEGAPKF-YHVRVLGGCLSLCYKGG 274
+IA++L+ + +L E + + P A G + VL GCL L
Sbjct: 229 ------LIAFNLIVRFDLALEEFEI---VRFPEAVANGNVDIQMDIGVLDGCLCLMCNYD 279
Query: 275 RRDRAEIWVMKEYKVQSSWTKAFVV 299
+ ++W+MKEY V+ SWTK F V
Sbjct: 280 -QSYVDVWMMKEYNVRDSWTKVFTV 303
>AT3G08750.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2656716-2657825
REVERSE LENGTH=369
Length = 369
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 152/368 (41%), Gaps = 58/368 (15%)
Query: 8 PTLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLD 67
P+LP ELI EIL ++P SL+RFK C W+ LI++ +F +H D + +P + D
Sbjct: 10 PSLPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLD-HYSPER--FIRTYD 66
Query: 68 KNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLA-YDYNRQVIVWNPST 126
+ + P + RD +Y + C G ML ++ + VWNP
Sbjct: 67 QQIIDPVTEILSDALI------PDEFRDLYPIYSMVHCDGLMLCTCRKWDNSLAVWNPVL 120
Query: 127 GFYKQILSFSDFMLDSLYGFGYDN--STDDY-FLVLIGLIW----VKAIIQAFSVKTNSC 179
K I ++ G GYD+ S D+Y L L+G + + + K++S
Sbjct: 121 REIKWIKPSVCYLHTDYVGIGYDDNVSRDNYKILKLLGRLPKDDDSDPNCEIYEFKSDS- 179
Query: 180 DFKYVNAQYR-DLGYHYRHGVFLNNSLHWLVXXXXXXXXXXXXXLVVIAYDLLEKSLSEI 238
+K + A++ D+ +GV + ++W+ +I +D ++ EI
Sbjct: 180 -WKTLVAKFDWDIDIRCNNGVSVKGKMYWIA--------KKKEDFTIIRFDFSTETFKEI 230
Query: 239 PLSPELAKPVLTAEGAPKFYHVRVLGGCLSLCYKGGRRDRAEIWVMKEYKVQ-SSWTKAF 297
+ P ++T G G LSL +G E+W+ + + S+++ F
Sbjct: 231 CVCP---YTLVTRLGC-------FDGDRLSLLLQGEESQGIEVWMTNKLSDKVVSFSQYF 280
Query: 298 VVTDCDIPCIHFYP--------------IRFIERGGVLGSNGNGRLMTFNA--EG---KL 338
VT D+P +H IR G V + + ++TF EG K
Sbjct: 281 NVTTPDLPALHLQSCMACPGYSIGKRRNIRVWCEGSVDVDDKSYVIITFYEIDEGGVIKQ 340
Query: 339 LEHHKYGQ 346
+E YGQ
Sbjct: 341 IETASYGQ 348
>AT3G21410.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7536719-7537951
REVERSE LENGTH=410
Length = 410
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 132/337 (39%), Gaps = 58/337 (17%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP EL EIL R+P +SLLR K C W L +D +F H L R N
Sbjct: 38 LPFELFEEILCRVPTKSLLRLKLTCKRWLALFNDKRFIYKHLALVREHIIR-------TN 90
Query: 70 KXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPSTGFY 129
+ + +LP K + +Y + C G +L ++ + VWNP
Sbjct: 91 QMVKIINPVVGACSSFSLPN--KFQVKGEIYTMVPCDGLLLCIFETG-SMAVWNPCLNQV 147
Query: 130 KQILSFS-DFMLDSLYGFGYDNSTDDYFLVLIGLIWV------------KAIIQAFSVKT 176
+ I + F S YG GYD + D + +L + V K + + +K+
Sbjct: 148 RWIFLLNPSFRGCSCYGIGYDGLSRDSYKILRFVNGVFTKNEYANTGSYKPEVDIYELKS 207
Query: 177 NSCDFKYVNAQYRDLGYHYR---HGVFLNNSLHWLVXXXXXXXXXXXXXLVVIAYDLLEK 233
NS V+ L +H G+ L +++W+ D+ +
Sbjct: 208 NSWKTFKVS-----LDWHVVLRCKGLSLKGNMYWIAKWNRKP-------------DIFIQ 249
Query: 234 SLSEIPLSPELAKPVLTAEGAPKFYHVRVL----GGCLSLCYKGGRRDRAEIWVMKEYK- 288
S + S E +P+ + ++V L G LSL ++ + ++WV + K
Sbjct: 250 SFN---FSTETFEPLCSLPVRYDVHNVVALSAFKGDNLSLLHQSKETSKIDVWVTNKVKN 306
Query: 289 -VQSSWTKAFVVTDCDIPCIHF-----YPIRFIERGG 319
V WTK F VT D+P + YP+ FI++
Sbjct: 307 GVSILWTKLFSVTRPDLPVLLAFENLSYPVHFIDKNN 343
>AT4G04690.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:2373999-2375135
REVERSE LENGTH=378
Length = 378
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDK 68
+LP EL+ EIL + P SL RFK C W+ +I+ +F +H D + R +D
Sbjct: 10 SLPFELVEEILKKTPAESLNRFKSTCKQWYGIITSKRFMYNHLDHSPERFIR-----IDD 64
Query: 69 NKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLL-----AYDYNRQ--VIV 121
+K F + P P R +S + C G ML +Y+ R+ + V
Sbjct: 65 HKTVQIMDPMTGIFS--DSPVPDVFRSPHSFASMVHCDGLMLCICSDSSYERTREANLAV 122
Query: 122 WNPSTGFYKQILSFSDFMLDSLYGFGYDNST-DDYFLVLIG--LIWVKAIIQAFSVKTNS 178
WNP T K I + +G GYDN+ ++Y +V + + + + K++S
Sbjct: 123 WNPVTKKIKWIEPLDSYYETDYFGIGYDNTCRENYKIVRFSGPMSFDDTECEIYEFKSDS 182
Query: 179 CDFKYVNAQYRDLGYHYRHGVFLNNSLHWLV 209
++ ++ +Y D+ Y GV + +++W+
Sbjct: 183 --WRTLDTKYWDV-YTQCRGVSVKGNMYWIA 210
>AT4G22390.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr4:11813757-11815074 REVERSE
LENGTH=402
Length = 402
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 11 PHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKNK 70
P +LI E+ LRL +L++ + + F LI P+F SH L++ L +
Sbjct: 5 PTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMI--LLRGP 62
Query: 71 XXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPST-GFY 129
++P P ++ ++ GS G + L + + ++NPST +
Sbjct: 63 RLLRTVELDSPENVSDIPHPLQAGGFTEVF--GSFNGVIGLC-NSPVDLAIFNPSTRKIH 119
Query: 130 KQILSFSDFMLDSL------YGFGYDNSTDDYFLVLIGLIWVK---------AIIQAFSV 174
+ + DF + YG GYD+ DD+ +V I +K ++ FS+
Sbjct: 120 RLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSL 179
Query: 175 KTNSCDFKYVNAQYRDL--GYHYR------HGVFLNNSLHWLVXXXXXXXXXXXXXLVVI 226
K NS + +++ L Y+Y +GV +NN LHW++ +I
Sbjct: 180 KKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFN----AII 235
Query: 227 AYDLLEKSLSEIPLSPELAKPVLTAEGAPKFYHVRVLGGCLSL-CYKGGRRDRAEIWVMK 285
YDL + + EL + VL GC+ L CY ++WV+K
Sbjct: 236 KYDLASDDIGVLSFPQELY--------IEDNMDIGVLDGCVCLMCYD--EYSHVDVWVLK 285
Query: 286 EYKVQSSWTKAFVV 299
EY+ SWTK + V
Sbjct: 286 EYEDYKSWTKLYRV 299
>AT1G77650.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:29181110-29182261 FORWARD
LENGTH=383
Length = 383
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 140/333 (42%), Gaps = 63/333 (18%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDK 68
+LP +++ E L + P+ SL+ K C + L +D +F +H DL+ RL+ LDK
Sbjct: 5 SLPSDVVEEFLFKTPIESLVLCKPTCKQLYALCNDKRFIYNHLDLSE---ERLMRIYLDK 61
Query: 69 NKXXXXXXXXXXXFVTLN---LPPPCKSRDHNSLYF-LGSCRGFMLLAY-----DYNRQV 119
K VTL+ LP P + +S+ F + C G +L + D ++
Sbjct: 62 IKIINP--------VTLDILCLPVPA---EFDSVTFNVIHCDGLLLCRWTTRGLDRYNKL 110
Query: 120 IVWNPSTGFYKQILSFSDFMLDSLYGFGY-DNSTDDYFLVLIGLIWVKAIIQAFSVKTNS 178
VWNP +G K + SF + D LYGFGY +N D + +L W K + + +K+
Sbjct: 111 AVWNPISGQLKFVESFFHGVTD-LYGFGYANNGPRDSYKILRVSYWRKE-CEIYDLKSKL 168
Query: 179 CDFKYVNAQYRDLGYHYRHGVFLNNSLHWLVXXXXXXXXXXXXXLVVIAYDLLEKSLSEI 238
++ +A + + VF+N +++W+ + ++ E +
Sbjct: 169 --WRAFSATLDWVVNTPQQNVFMNGNMYWIAD--------------TLGDNIRETFIQSF 212
Query: 239 PLSPELAKPVLTAEGAPKFYHVRVLGG----CLSLCYKGGRRDR---------------A 279
S E KP+ + K ++ G S+ R DR
Sbjct: 213 DFSKETFKPICSFPYENKIIDTLIMNGIHRIADSVILSSFRVDRLSLFRQQRLEDKKYEM 272
Query: 280 EIWVMKEYKVQ-SSWTKAFVVT-DCDIPCIHFY 310
E+WV + + SWTK F VT D+P ++ Y
Sbjct: 273 EVWVTNKVTDEVVSWTKYFNVTHHPDLPILNPY 305
>AT3G17530.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6000860-6002026
FORWARD LENGTH=388
Length = 388
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 26/217 (11%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPC---- 65
LPH+L +EIL R+P +SL ++K C W+ L DP F + +FD +L+
Sbjct: 6 LPHDLESEILSRVPAKSLAKWKTTCKRWYALFRDPSFVKKNFDKAGGREMIVLMNSRVYS 65
Query: 66 -----LDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVI 120
N + LN K D ++++ C G +L + ++
Sbjct: 66 NSVNLQGINNRFDPSMEVTGKLIKLN---DSKGVDISAIFH---CDGLILCTTTESTGLV 119
Query: 121 VWNPSTGFYKQILSFSDFMLDSLYGFGYDNSTD---DYFLVLIGLIWVKAIIQAFSVKTN 177
VWNP TG + I + + Y GY NS Y ++ +V + + +
Sbjct: 120 VWNPCTGEIRCIKPRIFYRCNDRYALGYGNSKSSCHSYKILRSCCYYVDQNLSLMAAEFE 179
Query: 178 SCDFKYVNAQYRDLG------YHYRHGVFLNNSLHWL 208
DF +RDLG Y GV L + +W+
Sbjct: 180 IYDFS--TDSWRDLGDITRDMIVYSSGVSLKGNTYWV 214
>AT3G17280.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5903453-5904613
REVERSE LENGTH=386
Length = 386
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 10/143 (6%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPT-----HRLLLP 64
LP++L+ EIL RLP +S+ + K C W+ L DP+F E A T H +
Sbjct: 7 LPYDLLPEILSRLPTKSIPKLKTTCKKWYALFKDPKFVEKKLGKAARETVFLMNHEVNSI 66
Query: 65 CLDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNP 124
+D + TL +P ++ + C G L A N +++VWNP
Sbjct: 67 SVDIHGIPKGYSVSMDFTGTLTIPEGSDLE----IFRIHHCNGLFLCAT-MNCRLVVWNP 121
Query: 125 STGFYKQILSFSDFMLDSLYGFG 147
TG I+ + + D +Y G
Sbjct: 122 CTGQITWIIPRTRYDSDDIYALG 144
>AT3G16580.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5647577-5648725
REVERSE LENGTH=382
Length = 382
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 1 MANEKTNP-----TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNA 55
MA+E+ P +LP ELI EIL R+P SLLRFK V W L D F +H
Sbjct: 1 MAHEEKRPWEFSLSLPWELIEEILSRVPPESLLRFKTVSKQWNALFRDKTFINNH----- 55
Query: 56 APTHRLLLPCLDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDY 115
T R +L K +TL++P H L C +L D
Sbjct: 56 KMTFRFILATKSKIYSVSIDPKIVVRELTLDIP---GLESHEIPKKLVDCDKLLLC--DM 110
Query: 116 NRQVIVWNPSTGFYKQILSFSDFMLDSLYGFGYDN 150
+ V++WNP I S+ YG GY+N
Sbjct: 111 EKGVVLWNPWLRHSTWIDQGSNHTRMESYGIGYNN 145
>AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483829
FORWARD LENGTH=334
Length = 334
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
+P+E++ EIL+RLPV+SL RF+ V W LI+ F + H L + +LL C D
Sbjct: 39 IPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHMALEKSKGCKLLFVCDD-- 96
Query: 70 KXXXXXXXXXXXFVTLNLPPPCKSR-DHNSLYFLG---------SCRGFMLLAYDYNRQV 119
T+ L S D + F G SC G + YD R V
Sbjct: 97 --FVDRAEDTLFLKTVALEKTSVSEGDEQAFEFEGYKGFLDISESCDGLVCF-YDTTRAV 153
Query: 120 IVWNPSTGFYKQI 132
V NP+T + ++
Sbjct: 154 EVMNPATTMFIEL 166
>AT3G49980.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:18530329-18531477
REVERSE LENGTH=382
Length = 382
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP EL+ EIL R+P SL + + C W L +D F+ HFD AP L+ ++
Sbjct: 5 LPQELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKHFD--KAPKQFLITVLEERC 62
Query: 70 KXXXXXXXXXXXFVTLNLPPPCKSRDHNS------LYFLGSCRGFMLLAYDYNRQVIVWN 123
+ F + D++S + + C G + + +++VWN
Sbjct: 63 RLSSLSINLHSGFPSEEFTGELSPIDYHSNSSQVIIMKIFHCDGLFVCTILKDTRIVVWN 122
Query: 124 PSTGFYKQILS---FSDFMLDSLYGFGYDNSTDD 154
P TG K I + + D + G+ DN + D
Sbjct: 123 PCTGQKKWIQTGENLDENGQDFVLGYYQDNKSSD 156
>AT3G17570.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6009413-6010558
FORWARD LENGTH=381
Length = 381
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 5/144 (3%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP +L EIL R+P SL + K C W+ L DP+F + H + A + L L
Sbjct: 5 LPRDLETEILSRVPATSLQKLKPTCKRWYTLFKDPEFLKKH--VGRAEREVISLMSLRVY 62
Query: 70 KXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPSTGFY 129
+ K + + + C G +L D +R ++VWNP TG
Sbjct: 63 SLSVNLSGIHSSVEMTGMLNSLKDSEDVKISDITECNGLLLCTTDDSR-LVVWNPYTGET 121
Query: 130 KQI--LSFSDFMLDSLYGFGYDNS 151
+ I S S + + + GYDN+
Sbjct: 122 RWIPYKSNSPYEMYQKFVLGYDNT 145
>AT5G10340.1 | Symbols: | F-box family protein |
chr5:3253122-3255045 FORWARD LENGTH=445
Length = 445
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 43/237 (18%)
Query: 10 LPHELIA-EILLRLPVRSLLRFKCVCTSWFFLISDPQFAES----HFDLNAAPTHRLLL- 63
LPH++I I++RL V++LL+FK V W I P F E H ++ H LL+
Sbjct: 69 LPHDVIEYHIMVRLDVKTLLKFKSVSKQWMSTIQSPSFQERQLIHHLSQSSGDPHVLLVS 128
Query: 64 ---PCLDKNKXXXXXXXXXXXFV------TLNLPPPCKSRDHNSLYFL--GSCRGFMLLA 112
PC + F+ ++ +P P + + LYF+ SC G + L
Sbjct: 129 LYDPCARQQDPSISSFEALRTFLVESSAASVQIPTPWEDK----LYFVCNTSCDGLICLF 184
Query: 113 YDYNRQVIVWNPSTGFYK-------QILSFSDFMLDSLY-------GFGYDNSTDDYFLV 158
Y IV NP+T +++ Q+++ + GFG D + Y V
Sbjct: 185 SFYELPSIVVNPTTRWHRTFPKCNYQLVAADKGERHECFKVACPTPGFGKDKISGTYKPV 244
Query: 159 L------IGLIWVKAIIQAFSVKTNSCDFKYVNAQYRDLGYHYRHGVFLNNSLHWLV 209
+ L + F TN+ ++YV L H + V+++ SLHW
Sbjct: 245 WLYNSAELDLNDKPTTCEVFDFATNA--WRYVFPASPHLILHTQDPVYVDGSLHWFT 299
>AT3G44120.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:15878609-15879763
REVERSE LENGTH=384
Length = 384
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 117/304 (38%), Gaps = 22/304 (7%)
Query: 6 TNPTLPHELIAEILLRLPVRSLLRFKCVCTSWFFLI-SDPQFAESHFDLNAAPTHRLLLP 64
T P LP +L+ EIL +P SL R + C W L D +FA H + A L L
Sbjct: 2 TLPELPKDLVEEILCFVPATSLKRLRSSCKEWNRLFKDDKRFARKHIEKAAKQFQPLTLT 61
Query: 65 -----C-LDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQ 118
C ++ N V+L P S ++ + C G +L + +
Sbjct: 62 KNYRICPINVNLHGTTPSLEVKNEVSLVDPHSKNSAAQFNIDRVFHCDGLLLCTSQKDSR 121
Query: 119 VIVWNPSTGFYKQILSFSDFMLDSLYGFGYDNSTDDYFLVLIGLIWVKAIIQAFSVKTNS 178
+VWNP TG K I + + GYDN + + + ++ + + ++S
Sbjct: 122 FVVWNPLTGVTKWIELGDRYNEGMAFILGYDNKSCNKSYKAMSFNYLDKDSEIYEFSSDS 181
Query: 179 CDFKYVNAQYRDLGY--HYRHGVFLNNSLHWLVXXXXXXXXXXXXXLVVIAYDLLEKSLS 236
++ ++ + Y ++R L + +WL + +I +D +
Sbjct: 182 --WRVIDDIIKPPHYMDYFRECFSLKGNTYWL--GIDRRRRPPDLRITLIKFDFGTERFG 237
Query: 237 EIPLSPELAKPVLTAEGAPKFYHVRVLGG-CLSLCYKGGRRDRAEIWVMKEYKVQS--SW 293
+ L P A ++ V+G LS+ +GG + E+WV + + SW
Sbjct: 238 YVSLPPPCQVHGFEAS------NLSVVGDEKLSVLVQGGSTSKTEVWVTSKIGEANVVSW 291
Query: 294 TKAF 297
+K
Sbjct: 292 SKVL 295
>AT1G32430.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:11704932-11706325
REVERSE LENGTH=380
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 1 MANEKTNPTLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHR 60
MAN++ LP +L EIL R+P SL RFK VC W L +D F +H T +
Sbjct: 1 MANKEK---LPWDLEEEILSRVPPTSLDRFKTVCKRWNALFNDKTFINNH-----KMTFQ 52
Query: 61 LLLPCLDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVI 120
+L K +TLN P K++ H +L+ LL D +
Sbjct: 53 FVLSTRSKIYSVSVNPKVEVRELTLN-NPGLKAQRHKNLFATSG-----LLLCDVGNGAV 106
Query: 121 VWNPSTGFYKQI-LSFSDFMLDSLYGFGYDNS 151
VWNP + I L ++ LD L G GYDN+
Sbjct: 107 VWNPWLKQSRCIKLEVNEPSLDFL-GIGYDNN 137
>AT3G22700.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8024798-8025814
REVERSE LENGTH=338
Length = 338
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 53/132 (40%), Gaps = 29/132 (21%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDK 68
LP +L+ EIL R+P SL R + C W L+ D +F E HF AP L+L
Sbjct: 3 NLPLDLVEEILSRVPATSLKRLRSTCRQWNALLKDRRFTEKHF--RKAPKESLVL----- 55
Query: 69 NKXXXXXXXXXXXFVTLNLPPPC---------KSRDHNS----LYFLGSCRGFMLLAYDY 115
V LN+ PP K NS + + C G +L
Sbjct: 56 --------MLKEISVNLNVTPPSIEFKDALGLKDSHSNSEQVDIVQVLHCDGLLLCTTKD 107
Query: 116 NRQVIVWNPSTG 127
NR V VWNP G
Sbjct: 108 NRHV-VWNPCLG 118
>AT3G10430.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:3242750-3243862
REVERSE LENGTH=370
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 88/219 (40%), Gaps = 34/219 (15%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLIS-DPQFAESHFDLNAAPTHRLLLPCLD 67
+LP +LI EIL R P SLLRFK C W+ LIS D +F H D + R+
Sbjct: 4 SLPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFLRI------ 57
Query: 68 KNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFML------LAYDYNRQVIV 121
+N+ + ++ P + + + L C G ML L D N + V
Sbjct: 58 ENRERVQILDPVTEILAVSTIP---NELRHKYFTLIHCDGLMLGMCYEELGSDPN--LAV 112
Query: 122 WNPSTGFYKQILSFSDFML---DSLYGFGYDNSTDDYFLVL---------IGLIWVKAII 169
WNP K I + GFGYD + D + +L + K I
Sbjct: 113 WNPVMRKIKWIKPSPPLVCYWGSDYLGFGYDKTFRDNYKILRFTYLGDDDDDESYPKCQI 172
Query: 170 QAFSVKTNSCDFKYVNAQYRDLGYHYRHGVFLNNSLHWL 208
F NS ++ + A++ GV +N S++W+
Sbjct: 173 YEF----NSGSWRSIEAKFDGEIDVEVDGVSVNGSMYWI 207
>AT1G11270.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3785715-3786653
REVERSE LENGTH=312
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 30/221 (13%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDL---NAAPTHRLLLPCL 66
LPH+++ IL RLPV SLLRFKCV W I F E + P ++
Sbjct: 35 LPHDVVGLILERLPVESLLRFKCVSNQWKSTIESQCFQERQLIRRMESRGPDVLVVSFAD 94
Query: 67 DKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPST 126
D++K T P ++L GSC G + + Y+ ++V NP+T
Sbjct: 95 DEDKYGRKAVFGSSIVSTFRFPT------LHTLICYGSCEGLICIYCVYSPNIVV-NPAT 147
Query: 127 GFYKQ--ILSFSDFMLDSLYGFGYDNST------DDYFLVLIGLIWV----------KAI 168
+++ + + F+ D YD T D +W+
Sbjct: 148 KWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLAFGKDKLNGTYKQVWLYNSSEFRLDDVTT 207
Query: 169 IQAFSVKTNSCDFKYVNAQYRDLGYHYRHGVFLNNSLHWLV 209
+ F N+ + + + YR Y+ V+ + S+HWL
Sbjct: 208 CEVFDFSNNAWRYVHPASPYR--INDYQDPVYSDGSVHWLT 246
>AT1G11270.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3785715-3786653
REVERSE LENGTH=312
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 30/221 (13%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDL---NAAPTHRLLLPCL 66
LPH+++ IL RLPV SLLRFKCV W I F E + P ++
Sbjct: 35 LPHDVVGLILERLPVESLLRFKCVSNQWKSTIESQCFQERQLIRRMESRGPDVLVVSFAD 94
Query: 67 DKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPST 126
D++K T P ++L GSC G + + Y+ ++V NP+T
Sbjct: 95 DEDKYGRKAVFGSSIVSTFRFPT------LHTLICYGSCEGLICIYCVYSPNIVV-NPAT 147
Query: 127 GFYKQ--ILSFSDFMLDSLYGFGYDNST------DDYFLVLIGLIWV----------KAI 168
+++ + + F+ D YD T D +W+
Sbjct: 148 KWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLAFGKDKLNGTYKQVWLYNSSEFRLDDVTT 207
Query: 169 IQAFSVKTNSCDFKYVNAQYRDLGYHYRHGVFLNNSLHWLV 209
+ F N+ + + + YR Y+ V+ + S+HWL
Sbjct: 208 CEVFDFSNNAWRYVHPASPYR--INDYQDPVYSDGSVHWLT 246
>AT1G47765.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17574906-17576092
REVERSE LENGTH=385
Length = 385
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 25/135 (18%)
Query: 2 ANEKTNPTLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRL 61
K+ +LP +L +EILLRLP +S+ RF+CV W + +DP F + P+
Sbjct: 18 TQSKSASSLPLDLTSEILLRLPEKSIARFRCVSKLWLSITTDPYFINLFETRSPRPS--- 74
Query: 62 LLPCLDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQV-- 119
LL C +N FV+ ++P S NS S + F+++ ++Y + V
Sbjct: 75 LLVCFIEND---------KLFVS-SIPQHLHSL-QNSKRSYSSSQLFIVIIWNYQKDVGL 123
Query: 120 ---------IVWNPS 125
IVWNPS
Sbjct: 124 ICFKTSKMPIVWNPS 138
>AT1G15015.1 | Symbols: | F-box family protein |
chr1:5172340-5172822 FORWARD LENGTH=160
Length = 160
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHF 51
TLPH ++ +IL RLPV++L +FKCVC++W I +F + H
Sbjct: 4 TLPHHVVEDILERLPVKTLRKFKCVCSTWRSTIDSQRFKDRHM 46
>AT1G12190.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4132967-4134094
REVERSE LENGTH=375
Length = 375
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 61/151 (40%), Gaps = 25/151 (16%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
P EL+ EIL R+P SL RFK V W L++D F + H L P RL
Sbjct: 6 FPWELMEEILYRVPSLSLSRFKTVSKEWNTLLNDKTFIKKHLAL-VRPQFRLW------- 57
Query: 70 KXXXXXXXXXXXFVTLNLPPPCKSR----------DHNSLYFLGSCRGFMLLAYDYNRQV 119
V+LN P + R DH + FL C + A ++ +
Sbjct: 58 ----TNSKVYSVDVSLNDDPNIELRELPLDIPYVIDHRTTNFL-PCNDLLFCASWWSNKA 112
Query: 120 IVWNPSTGFYKQILSFSDFMLDSLYGFGYDN 150
+VWNPS + I S + G GYD+
Sbjct: 113 VVWNPSLRQTRLIKSGEEHF--RFGGIGYDS 141
>AT3G20710.1 | Symbols: | F-box family protein |
chr3:7237911-7238999 REVERSE LENGTH=362
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 82/216 (37%), Gaps = 31/216 (14%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDK 68
LP +L+ EIL R+P + L + C +W+ L + FA + D A + L
Sbjct: 5 NLPKDLVEEILSRVPFKYLRAIRSTCKNWYDLSKNRSFANKNIDKAAVSGEKEFLMITQF 64
Query: 69 N----KXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGS----CRGFMLLAYDYNRQVI 120
N +++ L SRD F S C G L + + ++
Sbjct: 65 NVFWVGVNLHRSQNNSFDLSIQLKAKIVSRDKKDDLFQKSQVIHCNGVFLCVRE--KMLV 122
Query: 121 VWNPSTGFYKQILSFSDFMLDSLYGFGYDNSTDDYFLVLIGLIWVKAIIQAFSVKTNSCD 180
V NP G K+I+ F Y GYD S+ + I++ F V N+ +
Sbjct: 123 VLNPYWGQTKRIMPRPPFGCFDRYALGYDKSSGSH-----------KILRLFGVNQNNLN 171
Query: 181 FKYVNAQY---------RDLGYHYRHGVFLNNSLHW 207
+++ RD+ Y + GV LN +W
Sbjct: 172 IYDLSSSSWMIPDGTLERDMEYM-KQGVSLNGDTYW 206
>AT1G47790.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17600004-17601173
REVERSE LENGTH=389
Length = 389
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 3 NEKTNPTLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLL 62
K + P +L +EILLRLPV+S++RF+CV W +I+DP F +++ + T + L
Sbjct: 18 QSKPTSSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTY--ETQSSTRQSL 75
Query: 63 LPCLDKN 69
L C ++
Sbjct: 76 LFCFKQS 82
>AT3G22350.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7901905-7902715
FORWARD LENGTH=241
Length = 241
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP +L+ EIL R+ SL R + C W L F++ HF + AP ++L
Sbjct: 4 LPLDLVEEILSRVSATSLKRLRSTCKQWNTLFKKRSFSQKHFHI--APKESMVL------ 55
Query: 70 KXXXXXXXXXXXFVTLNLPPPC---------KSRDHNSL-----YFLGSCRGFMLLAYDY 115
+ LN+ PP K H++L + C G +L A
Sbjct: 56 --MLKEYRVCSMNINLNVSPPSVEFQGTLGIKDDSHSNLGQVEIVEVYHCDGLLLCATRD 113
Query: 116 NRQVIVWNPSTGFYKQILSFSDFMLDSLYGFGYDNS 151
NR ++VWNP G + I + S + GY+N+
Sbjct: 114 NR-LVVWNPCLGETRWIQLKDECRRYSTFALGYENN 148
>AT1G11270.3 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3785833-3786653
REVERSE LENGTH=223
Length = 223
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDL---NAAPTHRLLLPCL 66
LPH+++ IL RLPV SLLRFKCV W I F E + P ++
Sbjct: 35 LPHDVVGLILERLPVESLLRFKCVSNQWKSTIESQCFQERQLIRRMESRGPDVLVVSFAD 94
Query: 67 DKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPST 126
D++K T P ++L GSC G + + Y+ ++V NP+T
Sbjct: 95 DEDKYGRKAVFGSSIVSTFRFPT------LHTLICYGSCEGLICIYCVYSPNIVV-NPAT 147
Query: 127 GFYKQ--ILSFSDFMLDSLYGFGYDNST 152
+++ + + F+ D YD T
Sbjct: 148 KWHRSCPLSNLQQFLDDKFEKKEYDFPT 175
>AT3G10240.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:3166698-3167867
FORWARD LENGTH=389
Length = 389
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 31/135 (22%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQF----------------AESHFDL 53
+P +L++EILLRLP +S+ RF+CV W + ++P F A F +
Sbjct: 27 IPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFINLLTTRSPRLLLCFKANEKFFV 86
Query: 54 NAAPTHRLLLPCLDKNKXXXXXXXXXXXFVT--LNLPPPCKSRDHNSLYFLGSCRGFMLL 111
++ P HR +K+ + +N PP +S + L+
Sbjct: 87 SSIPQHRQTFETWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVNG-------------LI 133
Query: 112 AYDYNRQVIVWNPST 126
+ + ++IVWNPST
Sbjct: 134 CFQESARLIVWNPST 148
>AT3G22350.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7901905-7903041
FORWARD LENGTH=378
Length = 378
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP +L+ EIL R+ SL R + C W L F++ HF + AP ++L
Sbjct: 4 LPLDLVEEILSRVSATSLKRLRSTCKQWNTLFKKRSFSQKHFHI--APKESMVL------ 55
Query: 70 KXXXXXXXXXXXFVTLNLPPPC---------KSRDHNSLYFLG-----SCRGFMLLAYDY 115
+ LN+ PP K H++L + C G +L A
Sbjct: 56 --MLKEYRVCSMNINLNVSPPSVEFQGTLGIKDDSHSNLGQVEIVEVYHCDGLLLCATRD 113
Query: 116 NRQVIVWNPSTGFYKQILSFSDFMLDSLYGFGYDNS 151
NR ++VWNP G + I + S + GY+N+
Sbjct: 114 NR-LVVWNPCLGETRWIQLKDECRRYSTFALGYENN 148
>AT1G50870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:18855147-18856337
FORWARD LENGTH=396
Length = 396
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 PHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKNK 70
P +LI EILLRLPV+S+LRF+CV W +DP F S ++ ++ LL+ +K+K
Sbjct: 32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNS-YEARSSTRPSLLMFFKNKDK 90
>AT3G16590.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5649932-5651056
REVERSE LENGTH=374
Length = 374
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP EL EILLR+P SL RF+ VC W L +D +F +H P L K
Sbjct: 5 LPLELEDEILLRVPPLSLTRFRTVCKRWNTLFNDQRFINNHLAC-VRPQFILRTEKDSKI 63
Query: 70 KXXXXXXXXXXXFVTLNLP---PPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPST 126
LNL P K + + +L++ C GF+L + +V VWNP
Sbjct: 64 YSIGINIDDSLEVRELNLETQGPNKKLKVYRNLFY---CDGFLLCPALLD-EVAVWNPWL 119
Query: 127 GFYKQILSFSDFMLDSLYGFGYDNSTDD--YFLVLIGLIWVKAIIQAFS-VKTNSCDFKY 183
+ + + LYG GYDN + Y ++ G + I +++ + F++
Sbjct: 120 RKQTKWIEPKRSRFN-LYGLGYDNRRPEKCYKILGFGYGYSSEINGSYNRINPRVSVFEF 178
Query: 184 VNAQYRDL-----GYHYRHG---VFLNNSLHWLV 209
++DL +H R + LN +L+W+
Sbjct: 179 ETNAWKDLKFGLFDWHLRSPRTVLSLNGTLYWIA 212
>AT3G51171.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:19010856-19011626
FORWARD LENGTH=256
Length = 256
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 26/217 (11%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDKN 69
LP EL +IL RL +SL+RF+ VC W +L + F ++HF A P + D N
Sbjct: 4 LPWELEEDILSRLAAQSLVRFRSVCKRWNYLFDEKSFIKNHF-ARACPQFIFM---TDSN 59
Query: 70 KXXXXXXXXXXXFVTLNLPPPCKS----RDHNSLYF-LGSCRGFMLL-AYDYNRQVIVWN 123
T+ L S RD Y + +C GF+ ++ + WN
Sbjct: 60 IYSIEIIGLDGVDPTIKLRVLDSSGIPYRDWKFAYITITACDGFLFCNSWASPKGTAFWN 119
Query: 124 PSTGFYKQI--LSFSDFMLDSLYGFGYDNSTDDYFLVLIGLIWVK-----AIIQAFSVKT 176
P + KQ+ + + D + + G GYDN+ D ++G + + + + V
Sbjct: 120 P---WLKQVKWIEYEDKGFN-VCGLGYDNTRDGKVYKILGYLMCRPEDGSSYVYHQRVAI 175
Query: 177 NSC---DFKYVNAQYRD--LGYHYRHGVFLNNSLHWL 208
C FK++ +D L R V LN +L+WL
Sbjct: 176 YDCASHAFKFIEISNKDWFLTDVTRFSVSLNGNLYWL 212
>AT2G17830.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:7754261-7755445
FORWARD LENGTH=394
Length = 394
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 128/336 (38%), Gaps = 41/336 (12%)
Query: 10 LPHELIAEILLRLPVRSLLRFKCVCTSWFFLISD-------------PQFAESHFDLNAA 56
LP +L+AEIL R+P+ SL + C W L D Q F++
Sbjct: 7 LPRDLLAEILSRVPLASLRSVRFTCKKWNDLSKDRSFLKKQIVEAKKKQLKSKEFEVIMM 66
Query: 57 PTHRLLLPCLDKNKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFML-LAYDY 115
R+ L +D + + + D+ S F C G +L + D
Sbjct: 67 RNFRVYLTSVDLHNDVNPSFTPKGTLTSFSDDANQHQVDNVSSVF--HCDGLLLCITKDL 124
Query: 116 NRQVIVWNPSTGFYKQILSFSDFMLDSLYGFGYDNSTDDYFLVLIGLIW-----VKAII- 169
N +++VWNP G + I + + + +Y GYD + + L L + +A I
Sbjct: 125 NFRLVVWNPYFGQTRWIQPRNSYHIKDIYAIGYDENKNHKILRLKDQYYDYDSHPRARIC 184
Query: 170 --QAFSVKTNSCDFKYVNAQYRDLGYH-YRHGVFLNNSLHWLVXXXXXXXXXXXXXLVVI 226
+ +S ++NS +K V D H Y G+ + + +W +I
Sbjct: 185 EFELYSFESNS--WKVVLDVSPDWYIHSYHRGLSVKGNTYWYATEKHGYVN------FLI 236
Query: 227 AYDL-LEKSLSEIPLSPELAKPVLTAEGAPKFYHVRVLGGCLSLCYKGGRRDRAEIWVMK 285
+D EK +PL P A T + V L+L ++ EIWV
Sbjct: 237 CFDFTTEKFGPRLPL-PFNATESFTYDDVVTLSSVG--EEQLALLFQSDATLMMEIWVTS 293
Query: 286 EYK-VQSSWTKAFVVTDCDIPCIHF-YPIRFIERGG 319
+ + W K F+ D D+ I F Y ++F+ G
Sbjct: 294 KVDPTEVLWNKLFLAVDHDM--IEFDYELKFVADAG 327
>AT2G14710.1 | Symbols: | F-box family protein |
chr2:6298936-6300024 FORWARD LENGTH=362
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 78/203 (38%), Gaps = 23/203 (11%)
Query: 9 TLPHELIAEILLRLPVRSLLRFKCVCTSWFFLISDPQFAESHFDLNAAPTHRLLLPCLDK 68
LP ELI EIL R+P +SL+RF+ V W L D F +H T R +L
Sbjct: 6 NLPWELIEEILSRVPPKSLVRFRTVSKQWNALFDDKTFINNH-----KMTFRFIL----A 56
Query: 69 NKXXXXXXXXXXXFVTLNLPPPCKSRDHNSLYFLGSCRGFMLLAYDYNRQVIVWNPSTGF 128
K V LP + L L C LL N +VWNP G
Sbjct: 57 TKSKIYSVSIDPVIVVRELPLGIPGLESLELNNLVDCNE--LLVCVKNNGAVVWNPWLGQ 114
Query: 129 YKQI---LSFSDFMLDSLYGFGYDNSTDDYFLVLIGLIWVKAIIQAFSVKTNSCDFKYVN 185
+ I L+ S + D G YDN Y +V +W I FS D K +
Sbjct: 115 SRWIQPSLNHSPMVFD---GIVYDNKK--YKMVAFSGLWK---IYDFSSDV-WIDHKSKS 165
Query: 186 AQYRDLGYHYRHGVFLNNSLHWL 208
+ + V LN +L+W+
Sbjct: 166 TNSNTNVINVQTAVCLNGNLYWV 188