Miyakogusa Predicted Gene

Lj1g3v1049420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1049420.1 Non Chatacterized Hit- tr|I1LTI8|I1LTI8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11238
PE,87.84,0,4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE,NULL;
coiled-coil,NULL; ispG_gcpE: 4-hydroxy-3-,CUFF.26714.1
         (648 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60600.3 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS | 4-hydroxy-3...  1068   0.0  
AT5G60600.1 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS | 4-hydroxy-3...  1066   0.0  
AT5G60600.2 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS | 4-hydroxy-3...  1061   0.0  

>AT5G60600.3 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS |
           4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
           chr5:24359447-24363019 FORWARD LENGTH=717
          Length = 717

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/632 (80%), Positives = 564/632 (89%), Gaps = 27/632 (4%)

Query: 1   MATGAVPASFTNVKTWNSNLGFAKSIDFVRVADLKSIKSARTKVSIIRNSNPGQDIAELQ 60
           MATG +PA  + +K  +S +GF KS++ VR+ D++S++SAR +VS+IRNSN G D+AELQ
Sbjct: 1   MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQ 60

Query: 61  PASEGSPLLVPRKKYCESIQKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 120
           PASEGSPLLVPR+KYCES+ KTVRRKT TVMVGNVA+GSEHPIRIQTMTT+DTKD+ GTV
Sbjct: 61  PASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTV 120

Query: 121 EQVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 180
           ++VMRIADKGADIVRITVQGKKEADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAEC
Sbjct: 121 DEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAEC 180

Query: 181 FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEQVFSPLVEKCKKYGRAMRIGTNHG 240
           FDKIRVNPGNFADRRAQFE ++YTED+YQKEL+HIEQVF+PLVEKCKKYGRAMRIGTNHG
Sbjct: 181 FDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHG 240

Query: 241 SLSDRIMSYYGDSPRGMVESAFKFARICRKFDYQNFVFSMKASNPVIMVQAYRLLVAEMY 300
           SLSDRIMSYYGDSPRGMVESAF+FARICRK DY NFVFSMKASNPVIMVQAYRLLVAEMY
Sbjct: 241 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMY 300

Query: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360
           V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
Sbjct: 301 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360

Query: 361 NLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDFRGALHRDGSVLMSVTL 420
           NLG +AA+LQ+GVAPFEEKHRHYFDFQRR+G LPVQKEGEEVD+R  LHRDGSVLMS++L
Sbjct: 361 NLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISL 420

Query: 421 DQLKTPELLYKSLSAKLIVGMPFKVFYSILLNECLRILSNRLFAYLALYTQDLATVDSIL 480
           DQLK PELLY+SL+ KL+VGMPFK                           DLATVDSIL
Sbjct: 421 DQLKAPELLYRSLATKLVVGMPFK---------------------------DLATVDSIL 453

Query: 481 LRELPPVEDADSRLALKRLIDISMGVITPLSEQLTKPLPNALVLVNLKELSTGVYKLLPQ 540
           LRELPPV+D  +RLALKRLID+SMGVI PLSEQLTKPLPNA+VLVNLKELS G YKLLP+
Sbjct: 454 LRELPPVDDQVARLALKRLIDVSMGVIAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPE 513

Query: 541 GTRLVVSVRGDEPYEELEILKGVDATMLLHDLSYAEDKVSRVHAARRLFEYLSDNSLNFP 600
           GTRLVVS+RGDEPYEELEILK +DATM+LHD+ + EDKVSRVHAARRLFE+LS+NS+NFP
Sbjct: 514 GTRLVVSLRGDEPYEELEILKNIDATMILHDVPFTEDKVSRVHAARRLFEFLSENSVNFP 573

Query: 601 VIHHIQFPNGIHRDDLVIGAGSDAGSLLVDGL 632
           VIHHI FP GIHRD+LVI AG+ AG LLVDGL
Sbjct: 574 VIHHINFPTGIHRDELVIHAGTYAGGLLVDGL 605


>AT5G60600.1 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS |
           4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
           chr5:24359447-24363274 FORWARD LENGTH=741
          Length = 741

 Score = 1066 bits (2758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/632 (80%), Positives = 564/632 (89%), Gaps = 27/632 (4%)

Query: 1   MATGAVPASFTNVKTWNSNLGFAKSIDFVRVADLKSIKSARTKVSIIRNSNPGQDIAELQ 60
           MATG +PA  + +K  +S +GF KS++ VR+ D++S++SAR +VS+IRNSN G D+AELQ
Sbjct: 1   MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQ 60

Query: 61  PASEGSPLLVPRKKYCESIQKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 120
           PASEGSPLLVPR+KYCES+ KTVRRKT TVMVGNVA+GSEHPIRIQTMTT+DTKD+ GTV
Sbjct: 61  PASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTV 120

Query: 121 EQVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 180
           ++VMRIADKGADIVRITVQGKKEADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAEC
Sbjct: 121 DEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAEC 180

Query: 181 FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEQVFSPLVEKCKKYGRAMRIGTNHG 240
           FDKIRVNPGNFADRRAQFE ++YTED+YQKEL+HIEQVF+PLVEKCKKYGRAMRIGTNHG
Sbjct: 181 FDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHG 240

Query: 241 SLSDRIMSYYGDSPRGMVESAFKFARICRKFDYQNFVFSMKASNPVIMVQAYRLLVAEMY 300
           SLSDRIMSYYGDSPRGMVESAF+FARICRK DY NFVFSMKASNPVIMVQAYRLLVAEMY
Sbjct: 241 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMY 300

Query: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360
           V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
Sbjct: 301 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360

Query: 361 NLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDFRGALHRDGSVLMSVTL 420
           NLG +AA+LQ+GVAPFEEKHRHYFDFQRR+G LPVQKEGEEVD+R  LHRDGSVLMS++L
Sbjct: 361 NLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISL 420

Query: 421 DQLKTPELLYKSLSAKLIVGMPFKVFYSILLNECLRILSNRLFAYLALYTQDLATVDSIL 480
           DQLK PELLY+SL+ KL+VGMPFK                           DLATVDSIL
Sbjct: 421 DQLKAPELLYRSLATKLVVGMPFK---------------------------DLATVDSIL 453

Query: 481 LRELPPVEDADSRLALKRLIDISMGVITPLSEQLTKPLPNALVLVNLKELSTGVYKLLPQ 540
           LRELPPV+D  +RLALKRLID+SMGVI PLSEQLTKPLPNA+VLVNLKELS G YKLLP+
Sbjct: 454 LRELPPVDDQVARLALKRLIDVSMGVIAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPE 513

Query: 541 GTRLVVSVRGDEPYEELEILKGVDATMLLHDLSYAEDKVSRVHAARRLFEYLSDNSLNFP 600
           GTRLVVS+RGDEPYEELEILK +DATM+LHD+ + EDKVSRVHAARRLFE+LS+NS+NFP
Sbjct: 514 GTRLVVSLRGDEPYEELEILKNIDATMILHDVPFTEDKVSRVHAARRLFEFLSENSVNFP 573

Query: 601 VIHHIQFPNGIHRDDLVIGAGSDAGSLLVDGL 632
           VIHHI FP GIHRD+LVI AG+ AG LLVDGL
Sbjct: 574 VIHHINFPTGIHRDELVIHAGTYAGGLLVDGL 605


>AT5G60600.2 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS |
           4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
           chr5:24359447-24363274 FORWARD LENGTH=740
          Length = 740

 Score = 1061 bits (2744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/632 (80%), Positives = 563/632 (89%), Gaps = 28/632 (4%)

Query: 1   MATGAVPASFTNVKTWNSNLGFAKSIDFVRVADLKSIKSARTKVSIIRNSNPGQDIAELQ 60
           MATG +PA  + +K  +S +GF KS++ VR+ D++S++SAR +VS+IRNSN G D+AELQ
Sbjct: 1   MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNSNQGSDLAELQ 60

Query: 61  PASEGSPLLVPRKKYCESIQKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 120
           PASEGSPLLVPR+KYCES+ KTVRRKT TVMVGNVA+GSEHPIRIQTMTT+DTKD+ GTV
Sbjct: 61  PASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTV 120

Query: 121 EQVMRIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 180
           ++VMRIADKGADIVRITVQGKKEADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAEC
Sbjct: 121 DEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAEC 180

Query: 181 FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEQVFSPLVEKCKKYGRAMRIGTNHG 240
           FDKIRVNPGNFADRRAQFE ++YTED+YQKEL+HIEQVF+PLVEKCKKYGRAMRIGTNHG
Sbjct: 181 FDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHG 240

Query: 241 SLSDRIMSYYGDSPRGMVESAFKFARICRKFDYQNFVFSMKASNPVIMVQAYRLLVAEMY 300
           SLSDRIMSYYGDSPRGMVESAF+FARICRK DY NFVFSMKASNPVIMVQAYRLLVAEMY
Sbjct: 241 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMY 300

Query: 301 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360
           V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
Sbjct: 301 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 360

Query: 361 NLGMRAAELQKGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDFRGALHRDGSVLMSVTL 420
           NLG +AA+LQ+G APFEEKHRHYFDFQRR+G LPVQKEGEEVD+R  LHRDGSVLMS++L
Sbjct: 361 NLGTKAAKLQQG-APFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISL 419

Query: 421 DQLKTPELLYKSLSAKLIVGMPFKVFYSILLNECLRILSNRLFAYLALYTQDLATVDSIL 480
           DQLK PELLY+SL+ KL+VGMPFK                           DLATVDSIL
Sbjct: 420 DQLKAPELLYRSLATKLVVGMPFK---------------------------DLATVDSIL 452

Query: 481 LRELPPVEDADSRLALKRLIDISMGVITPLSEQLTKPLPNALVLVNLKELSTGVYKLLPQ 540
           LRELPPV+D  +RLALKRLID+SMGVI PLSEQLTKPLPNA+VLVNLKELS G YKLLP+
Sbjct: 453 LRELPPVDDQVARLALKRLIDVSMGVIAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPE 512

Query: 541 GTRLVVSVRGDEPYEELEILKGVDATMLLHDLSYAEDKVSRVHAARRLFEYLSDNSLNFP 600
           GTRLVVS+RGDEPYEELEILK +DATM+LHD+ + EDKVSRVHAARRLFE+LS+NS+NFP
Sbjct: 513 GTRLVVSLRGDEPYEELEILKNIDATMILHDVPFTEDKVSRVHAARRLFEFLSENSVNFP 572

Query: 601 VIHHIQFPNGIHRDDLVIGAGSDAGSLLVDGL 632
           VIHHI FP GIHRD+LVI AG+ AG LLVDGL
Sbjct: 573 VIHHINFPTGIHRDELVIHAGTYAGGLLVDGL 604