Miyakogusa Predicted Gene
- Lj1g3v1019010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1019010.1 tr|G7J7I6|G7J7I6_MEDTR Neuroblastoma-amplified
sequence OS=Medicago truncatula GN=MTR_3g091940 PE=4
,83.84,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Sec39,Secretory pathway
Sec39,NODE_33385_length_4131_cov_84.795448.path2.1
(1383 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24350.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 1549 0.0
AT5G24350.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Secretory ... 1548 0.0
>AT5G24350.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244). | chr5:8301537-8310746 FORWARD
LENGTH=2396
Length = 2396
Score = 1549 bits (4010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/1392 (55%), Positives = 1013/1392 (72%), Gaps = 51/1392 (3%)
Query: 2 PINEAARTLAESGKIGALNLLFKRHPYSLSPFMLEILASIPETVPVQTYGQLLPGRSPPS 61
PIN+AA +LAESG+IGALNLLFKRHPYSL FML+ILA+IPETVPV+TY LLPG+SPP+
Sbjct: 596 PINQAAISLAESGRIGALNLLFKRHPYSLVSFMLQILAAIPETVPVETYAHLLPGKSPPT 655
Query: 62 GVAVRQDDWVECKKMVHFIKTSVENHDSQIHVKTEPLVKHFLGYFWPSIDELSNWYANRA 121
+AVR++DWVEC+KMV FI EN + ++TEP+V+ LGY WPS +EL+ WY +RA
Sbjct: 656 SMAVREEDWVECEKMVKFINNLPENGKNDSLIQTEPIVRRCLGYNWPSSEELAAWYKSRA 715
Query: 122 RAMDDFSGQLDNCLSLLEFALRKGLSELQQFHQDVLYLHQIIYSDDNDSEMSFNMSLVMW 181
R +D +G LDNC+ L++ A RKG+SEL+QFH+D+ YLHQIIYSD+ E+ F++SL W
Sbjct: 716 RDIDSTTGLLDNCICLIDIACRKGISELEQFHEDLSYLHQIIYSDEIGGEICFSLSLAGW 775
Query: 182 VELPDYDKFKFMLKGVKEENVTERLRNRAIPFMCEKFHRASVIGEATSSDSTNQNTEESF 241
L DY+KFK ML+GVK + V RL +AIPFM ++F +G TN ESF
Sbjct: 776 EHLSDYEKFKIMLEGVKADTVVRRLHEKAIPFMQKRF-----LG-------TNNQNVESF 823
Query: 242 LVRWLKETASDNKLNICLVVIEEGCRNFQSNAFFKTDVEAVDCALQCIYLSTITDRWSIM 301
LV+WLKE A+ + +++C VI+EGC + + FFK DVEAVDCALQC+YL +TD+W++M
Sbjct: 824 LVKWLKEMAAKSDMDLCSKVIDEGCIDLYTVCFFKDDVEAVDCALQCLYLCKVTDKWNVM 883
Query: 302 SAILSKLPQLHDGTIAEVENLERRLRIAEGHIEAGRLLELYQVPKPLNFFLGAKSDEKGA 361
+ +LSKLP+++D E+++RRL+ AEGHIEAGRLLE YQVPKP+N+FL DEKG
Sbjct: 884 ATMLSKLPKINDKA---GEDIQRRLKRAEGHIEAGRLLEFYQVPKPINYFLEVHLDEKGV 940
Query: 362 KQIIRLILSKFIRRQPGRSDSEWASMWRDIQYLREKAFPFLDLEYTLIEFCRGLLKAGKF 421
KQI+RL+LSKF+RRQPGRSD++WA MWRD++ L+EKAF FLDLE+ L EFCRGLLKAGKF
Sbjct: 941 KQILRLMLSKFVRRQPGRSDNDWACMWRDLRQLQEKAFYFLDLEFVLTEFCRGLLKAGKF 1000
Query: 422 ALARNYLKGTSSVALASEKAENLVIQAAREYFFSASSLSCSEIWKARECLNLYPSTGNVK 481
+LARNYLKGT SVAL SEKAE+LVI AA+EYFFSA SL+ EIWKARECLN++ S+ VK
Sbjct: 1001 SLARNYLKGTGSVALPSEKAESLVINAAKEYFFSAPSLASEEIWKARECLNIFSSSRTVK 1060
Query: 482 AEADIIDALTVKLPNLGVNILPVQFREIKDPMEIVKMAITNQPGAYFHVDELIEVAKLLG 541
AE DIIDA+TV+LP LGV++LPVQF+++KDPMEI+KMAIT P AY H +ELIEVAKLLG
Sbjct: 1061 AEDDIIDAVTVRLPKLGVSLLPVQFKQVKDPMEIIKMAITGDPEAYLHGEELIEVAKLLG 1120
Query: 542 LRSADDXXXXXXXXXXXXXXSGDIQLAFDLCLVLAKKGHGSIWDLCAAIARGSAVENMDV 601
L S++D +GD+QLAFDLCLVL K+GHG IWDL AAIAR A+E+MD+
Sbjct: 1121 LNSSEDISSVKEAIAREAAIAGDMQLAFDLCLVLTKEGHGPIWDLGAAIARSPALEHMDI 1180
Query: 602 DSRKQLLGFSLSHCDDESIGDLLVAWKDVDMQGQCETLMMATGTNSSKFSVQGSCVNSLP 661
SRKQLLGF+L HCDDESI +LL AWKD D+QGQCETL M + +NS +F
Sbjct: 1181 SSRKQLLGFALGHCDDESISELLHAWKDFDLQGQCETLGMLSESNSPEF----------- 1229
Query: 662 KQRFQNTLDGNGCFQEF----DNITTDNQDFHLEKIRDMLSIVAKTLAVGDGADWALGLT 717
+DG C +F D +++D Q L++ +D +S VAK + V D D L
Sbjct: 1230 -----QKMDGVSCLTDFPQMLDGLSSDQQ-LDLDRAKDSISCVAKDMPVDDSVDLESLLK 1283
Query: 718 ENGKALSFAAFQLPWLIELSRKGEHNKKLS----TGKQYLNIRTQAVLTILSWLARNGFS 773
ENGK SFAA LPWL++L R + +K L GKQ+++I+ A++TILSWLA+NGF+
Sbjct: 1284 ENGKLFSFAASHLPWLLKLGRNRKLDKSLVLDSIPGKQFVSIKATALITILSWLAKNGFA 1343
Query: 774 PRDDLIASLAKSIMEPPVSEEEDIMGCSYLLNLVDAFNGVEVIEEQLKIRKDYQEICSTM 833
P+D+LIA + SI+E PV++EED++GCS+LLNLVDA N VEVIE+QL+IR +YQEI S M
Sbjct: 1344 PKDELIAMITDSIIEHPVTKEEDVIGCSFLLNLVDASNAVEVIEKQLRIRGNYQEIRSIM 1403
Query: 834 NVGMAYSLLHNSGIG-TDPAQXXXXXXXXXXXXHTSPNSDDIDKLGKVQSSFWREWKLKL 892
++GM YSLLH+SG+ T P Q T +DD+ K+ K+QS+FW+EWK KL
Sbjct: 1404 SLGMIYSLLHDSGVECTAPIQRRELLQKNFERKQTESLADDMSKIDKLQSTFWKEWKHKL 1463
Query: 893 EEQKRLTEHSRALQKIIPGVEAERFLSGDSIYIENVVVSLIESVKLEKKHILKDILKLAD 952
EE+ + SR L++IIPGVE ERFLS D YI+ V SLIESVK EKK ILKD+LKLAD
Sbjct: 1464 EEKMHDADRSRMLERIIPGVETERFLSHDIEYIKVAVFSLIESVKSEKKLILKDVLKLAD 1523
Query: 953 TYDLNCTEVLLRYLSAVLVFDVWTNDDLTAEVVGYKGEIISNGAKTIETISTIVYPAIDG 1012
TY L +EV+LRYLS++L ++WTN+D+TAE++ K EI++ + TIETISTIVYPA G
Sbjct: 1524 TYGLKQSEVILRYLSSILCSEIWTNEDITAEILQVKEEILTFASDTIETISTIVYPAASG 1583
Query: 1013 CNKLRLAYVYGLLSECYLQLETTEDLSPVVQPDHANANLRFAQYYKVIEQECKNVSFINK 1072
NK RLAY+Y LLSECY L +++ S +VQP+ + A L + +Y V++QEC VSFI
Sbjct: 1584 LNKQRLAYIYSLLSECYCHLAESKEASLLVQPNSSFAGL--SNWYNVLKQECSRVSFIKD 1641
Query: 1073 LNFKNIAGLRGLNFESFSDEVYACIEESSLSALSNMVQALVNMYGDSLPEGFMSWQDVYK 1132
L+FKNI+ L GLNF+SF++EV+A I E +L AL+ MV+ L + ++ +G +S QDVYK
Sbjct: 1642 LDFKNISELGGLNFDSFNNEVHAHINEMNLEALAKMVETLSGLSMENSSKGLISCQDVYK 1701
Query: 1133 YYIXXXXXXXETKATTDSSRTPEFLQGFISKLEQSYDMCRMYIRFLNQSDALGITKQYFT 1192
YI E++ D F QGF+ +LE++YD CR+Y+R L A+ I K++FT
Sbjct: 1702 QYIMNLLDTLESRRDLDFGSAESF-QGFLGQLEKTYDHCRVYVRILEPLQAVEILKRHFT 1760
Query: 1193 VIMPLCSSYGSLPDNSTWQECLIILLNFWIRLTDDMKEI-SLEESPGETNSFNPQCLMTC 1251
+++P SY +PD+STWQECLI+L+NFWIRL D+M+E+ S S E + +P+C+ +C
Sbjct: 1761 LVLPPNGSYMHIPDSSTWQECLILLINFWIRLADEMQEVKSSNPSLVENLTLSPECISSC 1820
Query: 1252 LKVLMKLVMEDIISPSQGWGSIYAYVNCGLSGDSTVEIYNFCQAMIFSGCGFGAISEVFS 1311
+L+KLVM D +SPSQ W +I Y+ GL GD EI+NFC+AM+FSGCGFG IS+VFS
Sbjct: 1821 FTLLIKLVMYDSLSPSQAWAAILVYLRSGLVGDCATEIFNFCRAMVFSGCGFGPISDVFS 1880
Query: 1312 FASSETGSASNWGTGSPDLPHLYLDILEAALQELVNGSHESQKLYPILSSLSKLEGDLKV 1371
S S + T DLPHLYL +LE LQ+LV+G+ E+Q LY +LSSLS LEG+L+
Sbjct: 1881 DMS------SRYPTALQDLPHLYLSVLEPILQDLVSGAPETQNLYRLLSSLSNLEGNLEE 1934
Query: 1372 MQCVRHVIWEKM 1383
++ VR V+W+++
Sbjct: 1935 LKRVRLVVWKQL 1946
>AT5G24350.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Secretory
pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria -
0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink). |
chr5:8301537-8310746 FORWARD LENGTH=2376
Length = 2376
Score = 1548 bits (4009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 771/1392 (55%), Positives = 1013/1392 (72%), Gaps = 51/1392 (3%)
Query: 2 PINEAARTLAESGKIGALNLLFKRHPYSLSPFMLEILASIPETVPVQTYGQLLPGRSPPS 61
PIN+AA +LAESG+IGALNLLFKRHPYSL FML+ILA+IPETVPV+TY LLPG+SPP+
Sbjct: 576 PINQAAISLAESGRIGALNLLFKRHPYSLVSFMLQILAAIPETVPVETYAHLLPGKSPPT 635
Query: 62 GVAVRQDDWVECKKMVHFIKTSVENHDSQIHVKTEPLVKHFLGYFWPSIDELSNWYANRA 121
+AVR++DWVEC+KMV FI EN + ++TEP+V+ LGY WPS +EL+ WY +RA
Sbjct: 636 SMAVREEDWVECEKMVKFINNLPENGKNDSLIQTEPIVRRCLGYNWPSSEELAAWYKSRA 695
Query: 122 RAMDDFSGQLDNCLSLLEFALRKGLSELQQFHQDVLYLHQIIYSDDNDSEMSFNMSLVMW 181
R +D +G LDNC+ L++ A RKG+SEL+QFH+D+ YLHQIIYSD+ E+ F++SL W
Sbjct: 696 RDIDSTTGLLDNCICLIDIACRKGISELEQFHEDLSYLHQIIYSDEIGGEICFSLSLAGW 755
Query: 182 VELPDYDKFKFMLKGVKEENVTERLRNRAIPFMCEKFHRASVIGEATSSDSTNQNTEESF 241
L DY+KFK ML+GVK + V RL +AIPFM ++F +G TN ESF
Sbjct: 756 EHLSDYEKFKIMLEGVKADTVVRRLHEKAIPFMQKRF-----LG-------TNNQNVESF 803
Query: 242 LVRWLKETASDNKLNICLVVIEEGCRNFQSNAFFKTDVEAVDCALQCIYLSTITDRWSIM 301
LV+WLKE A+ + +++C VI+EGC + + FFK DVEAVDCALQC+YL +TD+W++M
Sbjct: 804 LVKWLKEMAAKSDMDLCSKVIDEGCIDLYTVCFFKDDVEAVDCALQCLYLCKVTDKWNVM 863
Query: 302 SAILSKLPQLHDGTIAEVENLERRLRIAEGHIEAGRLLELYQVPKPLNFFLGAKSDEKGA 361
+ +LSKLP+++D E+++RRL+ AEGHIEAGRLLE YQVPKP+N+FL DEKG
Sbjct: 864 ATMLSKLPKINDKA---GEDIQRRLKRAEGHIEAGRLLEFYQVPKPINYFLEVHLDEKGV 920
Query: 362 KQIIRLILSKFIRRQPGRSDSEWASMWRDIQYLREKAFPFLDLEYTLIEFCRGLLKAGKF 421
KQI+RL+LSKF+RRQPGRSD++WA MWRD++ L+EKAF FLDLE+ L EFCRGLLKAGKF
Sbjct: 921 KQILRLMLSKFVRRQPGRSDNDWACMWRDLRQLQEKAFYFLDLEFVLTEFCRGLLKAGKF 980
Query: 422 ALARNYLKGTSSVALASEKAENLVIQAAREYFFSASSLSCSEIWKARECLNLYPSTGNVK 481
+LARNYLKGT SVAL SEKAE+LVI AA+EYFFSA SL+ EIWKARECLN++ S+ VK
Sbjct: 981 SLARNYLKGTGSVALPSEKAESLVINAAKEYFFSAPSLASEEIWKARECLNIFSSSRTVK 1040
Query: 482 AEADIIDALTVKLPNLGVNILPVQFREIKDPMEIVKMAITNQPGAYFHVDELIEVAKLLG 541
AE DIIDA+TV+LP LGV++LPVQF+++KDPMEI+KMAIT P AY H +ELIEVAKLLG
Sbjct: 1041 AEDDIIDAVTVRLPKLGVSLLPVQFKQVKDPMEIIKMAITGDPEAYLHGEELIEVAKLLG 1100
Query: 542 LRSADDXXXXXXXXXXXXXXSGDIQLAFDLCLVLAKKGHGSIWDLCAAIARGSAVENMDV 601
L S++D +GD+QLAFDLCLVL K+GHG IWDL AAIAR A+E+MD+
Sbjct: 1101 LNSSEDISSVKEAIAREAAIAGDMQLAFDLCLVLTKEGHGPIWDLGAAIARSPALEHMDI 1160
Query: 602 DSRKQLLGFSLSHCDDESIGDLLVAWKDVDMQGQCETLMMATGTNSSKFSVQGSCVNSLP 661
SRKQLLGF+L HCDDESI +LL AWKD D+QGQCETL M + +NS +F
Sbjct: 1161 SSRKQLLGFALGHCDDESISELLHAWKDFDLQGQCETLGMLSESNSPEF----------- 1209
Query: 662 KQRFQNTLDGNGCFQEF----DNITTDNQDFHLEKIRDMLSIVAKTLAVGDGADWALGLT 717
+DG C +F D +++D Q L++ +D +S VAK + V D D L
Sbjct: 1210 -----QKMDGVSCLTDFPQMLDGLSSDQQ-LDLDRAKDSISCVAKDMPVDDSVDLESLLK 1263
Query: 718 ENGKALSFAAFQLPWLIELSRKGEHNKKLS----TGKQYLNIRTQAVLTILSWLARNGFS 773
ENGK SFAA LPWL++L R + +K L GKQ+++I+ A++TILSWLA+NGF+
Sbjct: 1264 ENGKLFSFAASHLPWLLKLGRNRKLDKSLVLDSIPGKQFVSIKATALITILSWLAKNGFA 1323
Query: 774 PRDDLIASLAKSIMEPPVSEEEDIMGCSYLLNLVDAFNGVEVIEEQLKIRKDYQEICSTM 833
P+D+LIA + SI+E PV++EED++GCS+LLNLVDA N VEVIE+QL+IR +YQEI S M
Sbjct: 1324 PKDELIAMITDSIIEHPVTKEEDVIGCSFLLNLVDASNAVEVIEKQLRIRGNYQEIRSIM 1383
Query: 834 NVGMAYSLLHNSGIG-TDPAQXXXXXXXXXXXXHTSPNSDDIDKLGKVQSSFWREWKLKL 892
++GM YSLLH+SG+ T P Q T +DD+ K+ K+QS+FW+EWK KL
Sbjct: 1384 SLGMIYSLLHDSGVECTAPIQRRELLQKNFERKQTESLADDMSKIDKLQSTFWKEWKHKL 1443
Query: 893 EEQKRLTEHSRALQKIIPGVEAERFLSGDSIYIENVVVSLIESVKLEKKHILKDILKLAD 952
EE+ + SR L++IIPGVE ERFLS D YI+ V SLIESVK EKK ILKD+LKLAD
Sbjct: 1444 EEKMHDADRSRMLERIIPGVETERFLSHDIEYIKVAVFSLIESVKSEKKLILKDVLKLAD 1503
Query: 953 TYDLNCTEVLLRYLSAVLVFDVWTNDDLTAEVVGYKGEIISNGAKTIETISTIVYPAIDG 1012
TY L +EV+LRYLS++L ++WTN+D+TAE++ K EI++ + TIETISTIVYPA G
Sbjct: 1504 TYGLKQSEVILRYLSSILCSEIWTNEDITAEILQVKEEILTFASDTIETISTIVYPAASG 1563
Query: 1013 CNKLRLAYVYGLLSECYLQLETTEDLSPVVQPDHANANLRFAQYYKVIEQECKNVSFINK 1072
NK RLAY+Y LLSECY L +++ S +VQP+ + A L + +Y V++QEC VSFI
Sbjct: 1564 LNKQRLAYIYSLLSECYCHLAESKEASLLVQPNSSFAGL--SNWYNVLKQECSRVSFIKD 1621
Query: 1073 LNFKNIAGLRGLNFESFSDEVYACIEESSLSALSNMVQALVNMYGDSLPEGFMSWQDVYK 1132
L+FKNI+ L GLNF+SF++EV+A I E +L AL+ MV+ L + ++ +G +S QDVYK
Sbjct: 1622 LDFKNISELGGLNFDSFNNEVHAHINEMNLEALAKMVETLSGLSMENSSKGLISCQDVYK 1681
Query: 1133 YYIXXXXXXXETKATTDSSRTPEFLQGFISKLEQSYDMCRMYIRFLNQSDALGITKQYFT 1192
YI E++ D F QGF+ +LE++YD CR+Y+R L A+ I K++FT
Sbjct: 1682 QYIMNLLDTLESRRDLDFGSAESF-QGFLGQLEKTYDHCRVYVRILEPLQAVEILKRHFT 1740
Query: 1193 VIMPLCSSYGSLPDNSTWQECLIILLNFWIRLTDDMKEI-SLEESPGETNSFNPQCLMTC 1251
+++P SY +PD+STWQECLI+L+NFWIRL D+M+E+ S S E + +P+C+ +C
Sbjct: 1741 LVLPPNGSYMHIPDSSTWQECLILLINFWIRLADEMQEVKSSNPSLVENLTLSPECISSC 1800
Query: 1252 LKVLMKLVMEDIISPSQGWGSIYAYVNCGLSGDSTVEIYNFCQAMIFSGCGFGAISEVFS 1311
+L+KLVM D +SPSQ W +I Y+ GL GD EI+NFC+AM+FSGCGFG IS+VFS
Sbjct: 1801 FTLLIKLVMYDSLSPSQAWAAILVYLRSGLVGDCATEIFNFCRAMVFSGCGFGPISDVFS 1860
Query: 1312 FASSETGSASNWGTGSPDLPHLYLDILEAALQELVNGSHESQKLYPILSSLSKLEGDLKV 1371
S S + T DLPHLYL +LE LQ+LV+G+ E+Q LY +LSSLS LEG+L+
Sbjct: 1861 DMS------SRYPTALQDLPHLYLSVLEPILQDLVSGAPETQNLYRLLSSLSNLEGNLEE 1914
Query: 1372 MQCVRHVIWEKM 1383
++ VR V+W+++
Sbjct: 1915 LKRVRLVVWKQL 1926