Miyakogusa Predicted Gene

Lj1g3v0984590.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0984590.2 Non Chatacterized Hit- tr|I1JYR3|I1JYR3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34749
PE,55,0.00003,seg,NULL,CUFF.26640.2
         (413 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49250.1 | Symbols: DMS3, IDN1 | defective in meristem silenc...   411   e-115
AT5G24280.1 | Symbols: GMI1 | gamma-irradiation and mitomycin c ...   154   2e-37

>AT3G49250.1 | Symbols: DMS3, IDN1 | defective in meristem silencing
           3 | chr3:18258613-18260803 REVERSE LENGTH=420
          Length = 420

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/388 (55%), Positives = 282/388 (72%), Gaps = 2/388 (0%)

Query: 27  VDLNENCAEAKGNVQNGE-WTQAESNLRHSQILQGDLDTLGMKIKQHEDXXXXXXXEKSK 85
           ++L+++   A+   QNG     AE  + +S+ L+ DL+ +G KIKQHED       +K+K
Sbjct: 24  MNLDQSSPVARNETQNGGGIAHAEFAMFNSKRLESDLEAMGNKIKQHEDNLKFLKSQKNK 83

Query: 86  LDDVILHLQATVGRPESSSTTKAGNSGDPHLTTEGVNKQILQHEKSAAGILYELKTIHGA 145
           +D+ I+ LQ  + +  SS T ++ NS D  L  E +N QIL+HE SAAG+L  ++T+HGA
Sbjct: 84  MDEAIVDLQVHMSKLNSSPTPRSENS-DNSLQGEDINAQILRHENSAAGVLSLVETLHGA 142

Query: 146 QVSQLSLTKDVVGIVAMLGKVEDDNLSRLFSEYLGADTMRAVVCRTYEGVKALEMYDNVG 205
           Q SQL LTK VVG+VA LGKV D+NLS++ S YLG  +M AVVCR YE V ALE YDN G
Sbjct: 143 QASQLMLTKGVVGVVAKLGKVNDENLSQILSNYLGTRSMLAVVCRNYESVTALEAYDNHG 202

Query: 206 CINKSSGLHSLGAAIGRPLDGRFLVICLESLRPYTGKYFLDDSERKLAILKPRFPNGECP 265
            I+ ++GLH LG++IGR +   F  ICLE+LRPY G++  DD +R+L +LKP+ PNGECP
Sbjct: 203 NIDINAGLHCLGSSIGREIGDSFDAICLENLRPYVGQHIADDLQRRLDLLKPKLPNGECP 262

Query: 266 PGFLGFAVNMINIDSCNLFCVTPSGYGLRETLFYNLFSRLQVYKTRAEMIQALPLISDGA 325
           PGFLGFAVNMI ID   L CVT  GYGLRETLFYNLFSRLQVYKTRA+MI ALP ISDGA
Sbjct: 263 PGFLGFAVNMIQIDPAYLLCVTSYGYGLRETLFYNLFSRLQVYKTRADMISALPCISDGA 322

Query: 326 LSLDGGMVRSCGVFTLGNREDVDVKFPRPDKSTELDGEIETERQMKDIKWKKEKVLEDLK 385
           +SLDGG++R  G+F LGNR++V+V+F +P  S  +D   E E++MK++KWKKEK LED+K
Sbjct: 323 VSLDGGIIRKTGIFNLGNRDEVNVRFAKPTASRTMDNYSEAEKKMKELKWKKEKTLEDIK 382

Query: 386 RERTLLDMAKFNFSKKKNDLLKLLEQSS 413
           RE+ L + A FNF KKK + ++ L QSS
Sbjct: 383 REQVLREHAVFNFGKKKEEFVRCLAQSS 410


>AT5G24280.1 | Symbols: GMI1 | gamma-irradiation and mitomycin c
            induced 1 | chr5:8251378-8261401 REVERSE LENGTH=1598
          Length = 1598

 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 135/239 (56%), Gaps = 14/239 (5%)

Query: 117  TTEGVNKQILQ-HEKSAAGILYELKTIHGAQVSQLSLTKDVVGIVAMLGKVEDDNLSRLF 175
            T E + KQI + H  +AA +   L        S     K + G+VA+LG V   +LSR+ 
Sbjct: 1313 TKESMMKQIEEKHHDTAASVFCCLYRKAPPPRSLFLSQKGMFGVVALLGSVASTSLSRVL 1372

Query: 176  SEYLGADTMRAVVCRTYE-GVKALEMYDNVGCINKSSGLHSLGAAIGRPLDGRFLVICLE 234
            SEYLG DTM ++VC++ + G K+ E               S  A++GR +  RFLVICL+
Sbjct: 1373 SEYLGKDTMLSLVCKSSQFGPKSDEYRK----------FQSEAASLGRSITNRFLVICLD 1422

Query: 235  SLRPYTGKYFLDDSERKLAILKPRFPNGECPPGFLGFAVNMINIDSCNLFCVTPSGYGLR 294
            + RP+      +D +++LA+  P  PNG+  PGF G+AVNMI++ S  L   + SGYGLR
Sbjct: 1423 ATRPWRNGLVRNDPQKRLAMDNPYLPNGDPIPGFKGYAVNMIDLASEELDIQSSSGYGLR 1482

Query: 295  ETLFYNLFSRLQVYKTRAEMIQALPLISDG-ALSLDGGMVRSCGVFTLGNREDVDVKFP 352
            ETLFY +F  LQVY+T   +  ALP I+ G A+SLDG + R  G F        +V FP
Sbjct: 1483 ETLFYGVFRELQVYETAEHLEAALPHINGGDAVSLDGVIARENG-FIYSGCCTPEVHFP 1540