Miyakogusa Predicted Gene

Lj1g3v0969960.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0969960.2 Non Chatacterized Hit- tr|I1JYT1|I1JYT1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.01,0,seg,NULL;
coiled-coil,NULL,CUFF.26730.2
         (1243 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53440.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   304   2e-82

>AT5G53440.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: cytosol;
           EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
           growth stages; Has 1807 Blast hits to 1807 proteins in
           277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:21683679-21687970
           REVERSE LENGTH=1181
          Length = 1181

 Score =  304 bits (779), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 208/521 (39%), Positives = 292/521 (56%), Gaps = 44/521 (8%)

Query: 486 SGISDRGPKYKSMDKPIKIDECPAGDLSTERSSSAKASPMGLIERSPSSTSIERRYVNKS 545
           SG S+RG + K  +K   +++   G+   ERS +AKASP  ++ERSPSSTS+ERRY N+ 
Sbjct: 487 SGGSERGTRQKVSEKTANMEDGVLGEFPAERSFAAKASPRPMVERSPSSTSLERRYNNRG 546

Query: 546 GVKRNLEIDESGRRSSNDGRDFS-TSDDRHGRELTLEKLDEPSQADSSFYSRTNQSNPPV 604
           G +R++E++E+G R  N+ RD+S T ++RH        +DE SQA+ SF ++ NQ+N   
Sbjct: 547 GARRSIEVEETGHR--NNARDYSATEEERH-------LVDETSQAELSFNNKANQNNSSF 597

Query: 605 IPTPPGFRTALDRPFTGSMEDDVRDNSNTRYRRSSEHGFGRMHG---GNSWRAVPNWTSX 661
            P P   R+ +  P  G  E+D R N+  RY+R    G   M G    N WR VP+W S 
Sbjct: 598 PPRPES-RSGVSSPRVGPREEDNRVNTGGRYKRG---GVDAMMGRGQSNMWRGVPSWPSP 653

Query: 662 XXXXXXXXXXXXXXXXXQAMMPQFASQPLFGIRAPMEVNHAGIPYHIADADRFPGHLRPL 721
                            Q MMPQF S  LFG+R  ME+NH GI YHI DA+RF GH+RPL
Sbjct: 654 LSNGYFPFQHVPPHGAFQTMMPQFPSPALFGVRPSMEMNHQGISYHIPDAERFSGHMRPL 713

Query: 722 GWPNMMDGTGPAHLHGW--DNSNGVFRDDTQMYGGSDWDRNRHSTNSHGWESGSETWKEQ 779
           GW NMMD +G +H+HG+  D SN V RD++ MYGGS+WD+NR   N  GWESG++ WK +
Sbjct: 714 GWQNMMDSSGASHMHGFFGDMSNSV-RDESNMYGGSEWDQNRR-MNGRGWESGADEWKSR 771

Query: 780 NSDSKKDLPSPACKDESVPAVVDN-GLTDQTIRMSQDEHNRDEFHDKSPETKLTSVNSPE 838
           N D+  ++ S + KD++   V D+  L  QT   S  ++NR     KS E   +++ SP 
Sbjct: 772 NGDASMEVSSMSVKDDNSAQVADDESLGGQT---SHSDNNR----AKSVEAG-SNLTSPA 823

Query: 839 KVPLNSSPTAALEKVPD--TSTPSDNTTLLSRFYLSKLDISVDLVLPELYDQCMYTLNIG 896
           K    SSP    E   D   S   DNT    R YLSKLD+S  L   EL  +C+ +L IG
Sbjct: 824 KELHASSPKTMEEVAADDPVSETIDNTERYCRHYLSKLDVSAGLADAELR-KCI-SLLIG 881

Query: 897 K---PVDAVASTELLLKNGSSARQKLAASSSK--RPFPAIDNSIFQRAIGIYKKQRVK-- 949
           +    +D   +  + LK G     K  ++S K    FP+ ++S+FQ A+  YK+QR +  
Sbjct: 882 EEHLAMDDGTAVFVNLKEGGKRVTKSNSNSLKALSLFPSQNSSVFQIAMDFYKEQRFEIK 941

Query: 950 -LPNGGDVDVIAV--SNQVQVNESVPVPGLENRQISVSASD 987
            LPN  + +   V  SN V+V  +  +    N   S+ A+D
Sbjct: 942 GLPNVKNHEAPQVPPSNLVKVENNDDLNDARNGNSSIEATD 982