Miyakogusa Predicted Gene

Lj1g3v0969950.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0969950.2 Non Chatacterized Hit- tr|G7IFI7|G7IFI7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,89.66,0,Ribulose-phoshate binding barrel,Ribulose-phosphate
binding barrel; SUBFAMILY NOT NAMED,NULL; 1-(5-P,CUFF.26721.2
         (308 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36230.1 | Symbols: APG10, HISN3 | Aldolase-type TIM barrel f...   438   e-123

>AT2G36230.1 | Symbols: APG10, HISN3 | Aldolase-type TIM barrel
           family protein | chr2:15193878-15195509 REVERSE
           LENGTH=304
          Length = 304

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/303 (72%), Positives = 249/303 (82%), Gaps = 1/303 (0%)

Query: 1   MRNLASAPSSLNFPIFHPNKLRSATLNPXXXXXXXXXXXIQCAVRFCPCIDIHKGKVKQI 60
           MR L+S   S     +   K +S+               +  AV+F PCIDIHKGKVKQI
Sbjct: 1   MRTLSSQLYSNGGLTWFQKKNQSSLFIKHLRVSKPSRVQLISAVQFRPCIDIHKGKVKQI 60

Query: 61  VGSTLEDLKGDGGSEPVTNFESDKSAAEYATLYKQDGLTGGHVIMLGADPLSKAAAFEAL 120
           VGSTL DLK DG S  VTNFESDKSA EYA +YK+DGLTGGHVIMLGADPLS+AAA  AL
Sbjct: 61  VGSTLRDLKEDG-SVLVTNFESDKSAEEYAKMYKEDGLTGGHVIMLGADPLSQAAAIGAL 119

Query: 121 HAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDLGRLKDLVRIVGKERLVL 180
           HAYPGGLQVGGGINS+NC+SYIEEGASHVIVTSYVFNNG++DL RLKD+V IVGK+RL+L
Sbjct: 120 HAYPGGLQVGGGINSENCMSYIEEGASHVIVTSYVFNNGKIDLERLKDIVSIVGKQRLIL 179

Query: 181 DLSCRKKDGKYAIVTDRWQKFSDVSLDAEVMEFLASFADEFLVHGVDVEGKKLGIDEELV 240
           DLSCRKKDG+YAIVTDRWQKFSDV LD + +EFL  F+DEFLVHGVDVEGKKLGIDEELV
Sbjct: 180 DLSCRKKDGRYAIVTDRWQKFSDVILDEKSLEFLGGFSDEFLVHGVDVEGKKLGIDEELV 239

Query: 241 ALLGKHSPIPVTYAGGVTVLADLERIKTAGMGRVDVTVGSALDIFGGSLAYQEVVAWHNH 300
           ALLG +SPIPVTYAGGVTV+ D+ERIK AG GRVDVTVGSALDIFGG+L Y++VVAWH+ 
Sbjct: 240 ALLGNYSPIPVTYAGGVTVMDDVERIKDAGKGRVDVTVGSALDIFGGNLPYKDVVAWHHK 299

Query: 301 QKA 303
           Q +
Sbjct: 300 QHS 302