Miyakogusa Predicted Gene

Lj1g3v0969940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0969940.1 Non Chatacterized Hit- tr|C6TJR8|C6TJR8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25564
PE,81.03,5e-19,SUBFAMILY NOT NAMED,NULL;
1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO]
IMIDAZOLE,CUFF.26720.1
         (67 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36230.1 | Symbols: APG10, HISN3 | Aldolase-type TIM barrel f...    91   1e-19

>AT2G36230.1 | Symbols: APG10, HISN3 | Aldolase-type TIM barrel
           family protein | chr2:15193878-15195509 REVERSE
           LENGTH=304
          Length = 304

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 8   IPVTYAGGVTVLADLERIKTAGMGRVDVTVGSALDIFGGSLAYQEVVAWHNHQKA 62
           IPVTYAGGVTV+ D+ERIK AG GRVDVTVGSALDIFGG+L Y++VVAWH+ Q +
Sbjct: 248 IPVTYAGGVTVMDDVERIKDAGKGRVDVTVGSALDIFGGNLPYKDVVAWHHKQHS 302