Miyakogusa Predicted Gene

Lj1g3v0968890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0968890.1 Non Chatacterized Hit- tr|B9T875|B9T875_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,66.15,8e-18,DUF3475,Protein of unknown function DUF3475; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_93565_length_144_cov_10.638889.path1.1
         (65 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04550.1 | Symbols:  | Protein of unknown function (DUF668) |...    83   4e-17
AT3G23160.1 | Symbols:  | Protein of unknown function (DUF668) |...    63   5e-11
AT5G51670.1 | Symbols:  | Protein of unknown function (DUF668) |...    50   2e-07

>AT5G04550.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr5:1303757-1305556 REVERSE LENGTH=599
          Length = 599

 Score = 82.8 bits (203), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 56/65 (86%)

Query: 1   MSKVVNLWQSLSDKQIARLREETTDSIGLRKLISDDENFIVRLICVEKLENMAHVAESVA 60
           +SK+V+LWQSLSDK +ARLR+E T S G++KL+S+D++FIVRLI  E +EN+ +VA++VA
Sbjct: 37  LSKLVHLWQSLSDKNVARLRDEITHSTGIKKLVSEDDDFIVRLIRDEMMENVENVAKAVA 96

Query: 61  RLGKK 65
           RL +K
Sbjct: 97  RLARK 101


>AT3G23160.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr3:8260059-8261654 REVERSE LENGTH=531
          Length = 531

 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 48/65 (73%)

Query: 1   MSKVVNLWQSLSDKQIARLREETTDSIGLRKLISDDENFIVRLICVEKLENMAHVAESVA 60
           MSK ++L +SLSD +I++L+ E   S G+RKL+S DEN ++ L   EKL++++ VA  V+
Sbjct: 54  MSKTIHLHRSLSDTEISKLKAEVFHSEGVRKLVSSDENHLLDLSVSEKLDDLSRVASVVS 113

Query: 61  RLGKK 65
           RLGKK
Sbjct: 114 RLGKK 118


>AT5G51670.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr5:20993560-20995096 FORWARD LENGTH=474
          Length = 474

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 41/65 (63%)

Query: 1   MSKVVNLWQSLSDKQIARLREETTDSIGLRKLISDDENFIVRLICVEKLENMAHVAESVA 60
           M+K+++L  SL+D  +   R+ +    GL K+++ DE F + L+C E  +++AH A SV+
Sbjct: 48  MTKLLHLTHSLTDSNLLTPRDHSLSLEGLTKIVNGDETFHLSLVCAELADSLAHAANSVS 107

Query: 61  RLGKK 65
           RL  +
Sbjct: 108 RLSNR 112