Miyakogusa Predicted Gene

Lj1g3v0948530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0948530.1 Non Chatacterized Hit- tr|K4CPJ6|K4CPJ6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.15,1e-17,coiled-coil,NULL; seg,NULL,CUFF.26558.1
         (626 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53220.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   173   4e-43
AT5G53220.2 | Symbols:  | unknown protein; Has 3081 Blast hits t...   173   4e-43
AT5G53220.1 | Symbols:  | unknown protein; Has 3099 Blast hits t...   173   4e-43

>AT5G53220.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; Has
           30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr5:21596824-21598004
           FORWARD LENGTH=368
          Length = 368

 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/202 (48%), Positives = 133/202 (65%), Gaps = 21/202 (10%)

Query: 428 VPRNDDADDDQSIEDLSYSEGESMSNFIVNDSD----VSDSGDTFSKSEDGSNGDVDTAS 483
           +P  D+A+DD++ E+ S SEGES+  FI++D D    VS+  D     E           
Sbjct: 178 IPTTDNAEDDETEEEGSESEGESLDGFIIDDDDSQESVSEKSDEIGVEE----------- 226

Query: 484 SNLQDVSDGEMNFGEILSKIRRSKNNNEMKWEYEGDMLAAFGKDPELCMKAVCSLYRQQT 543
                 SDGE+ + +++S++RR K   + KWEYE DMLA FGKDPELCM+AVC L+R QT
Sbjct: 227 ------SDGEVGYADVMSRLRREKKPEKRKWEYEADMLADFGKDPELCMRAVCVLFRFQT 280

Query: 544 SEEQMSKEAIYQNNRGFSKFDAHRGSALAEFLTDGDPSSGLKKSVEDLQEYDPKAVELCR 603
            +E++ + +   N RGFSK DA RG+++A FLTDGD +  +KKSVE+L+ +D K VE C 
Sbjct: 281 EDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCE 340

Query: 604 TLAIRYSKQLYEIYKNNEDPFF 625
            LA +YSKQL++IY N EDPFF
Sbjct: 341 ELARKYSKQLFQIYNNREDPFF 362


>AT5G53220.2 | Symbols:  | unknown protein; Has 3081 Blast hits to
           2526 proteins in 331 species: Archae - 2; Bacteria -
           227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses
           - 49; Other Eukaryotes - 1012 (source: NCBI BLink). |
           chr5:21596824-21598004 FORWARD LENGTH=368
          Length = 368

 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/202 (48%), Positives = 133/202 (65%), Gaps = 21/202 (10%)

Query: 428 VPRNDDADDDQSIEDLSYSEGESMSNFIVNDSD----VSDSGDTFSKSEDGSNGDVDTAS 483
           +P  D+A+DD++ E+ S SEGES+  FI++D D    VS+  D     E           
Sbjct: 178 IPTTDNAEDDETEEEGSESEGESLDGFIIDDDDSQESVSEKSDEIGVEE----------- 226

Query: 484 SNLQDVSDGEMNFGEILSKIRRSKNNNEMKWEYEGDMLAAFGKDPELCMKAVCSLYRQQT 543
                 SDGE+ + +++S++RR K   + KWEYE DMLA FGKDPELCM+AVC L+R QT
Sbjct: 227 ------SDGEVGYADVMSRLRREKKPEKRKWEYEADMLADFGKDPELCMRAVCVLFRFQT 280

Query: 544 SEEQMSKEAIYQNNRGFSKFDAHRGSALAEFLTDGDPSSGLKKSVEDLQEYDPKAVELCR 603
            +E++ + +   N RGFSK DA RG+++A FLTDGD +  +KKSVE+L+ +D K VE C 
Sbjct: 281 EDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCE 340

Query: 604 TLAIRYSKQLYEIYKNNEDPFF 625
            LA +YSKQL++IY N EDPFF
Sbjct: 341 ELARKYSKQLFQIYNNREDPFF 362


>AT5G53220.1 | Symbols:  | unknown protein; Has 3099 Blast hits to
           2528 proteins in 332 species: Archae - 2; Bacteria -
           245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses
           - 49; Other Eukaryotes - 1012 (source: NCBI BLink). |
           chr5:21596824-21598004 FORWARD LENGTH=368
          Length = 368

 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/202 (48%), Positives = 133/202 (65%), Gaps = 21/202 (10%)

Query: 428 VPRNDDADDDQSIEDLSYSEGESMSNFIVNDSD----VSDSGDTFSKSEDGSNGDVDTAS 483
           +P  D+A+DD++ E+ S SEGES+  FI++D D    VS+  D     E           
Sbjct: 178 IPTTDNAEDDETEEEGSESEGESLDGFIIDDDDSQESVSEKSDEIGVEE----------- 226

Query: 484 SNLQDVSDGEMNFGEILSKIRRSKNNNEMKWEYEGDMLAAFGKDPELCMKAVCSLYRQQT 543
                 SDGE+ + +++S++RR K   + KWEYE DMLA FGKDPELCM+AVC L+R QT
Sbjct: 227 ------SDGEVGYADVMSRLRREKKPEKRKWEYEADMLADFGKDPELCMRAVCVLFRFQT 280

Query: 544 SEEQMSKEAIYQNNRGFSKFDAHRGSALAEFLTDGDPSSGLKKSVEDLQEYDPKAVELCR 603
            +E++ + +   N RGFSK DA RG+++A FLTDGD +  +KKSVE+L+ +D K VE C 
Sbjct: 281 EDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCE 340

Query: 604 TLAIRYSKQLYEIYKNNEDPFF 625
            LA +YSKQL++IY N EDPFF
Sbjct: 341 ELARKYSKQLFQIYNNREDPFF 362