Miyakogusa Predicted Gene
- Lj1g3v0948490.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0948490.2 Non Chatacterized Hit- tr|K4CPJ6|K4CPJ6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.44,3e-18,seg,NULL,CUFF.26552.2
(393 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53220.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 151 9e-37
AT5G53220.2 | Symbols: | unknown protein; Has 3081 Blast hits t... 151 9e-37
AT5G53220.1 | Symbols: | unknown protein; Has 3099 Blast hits t... 151 9e-37
>AT5G53220.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has
30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr5:21596824-21598004
FORWARD LENGTH=368
Length = 368
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 141/286 (49%), Gaps = 52/286 (18%)
Query: 120 NLPISQLKRTHIQKASADRVAMSEDSSLPAAISEDDKVTDNVKIRRRRLQPLRECLSKIH 179
N+PIS LK L+P + +S +
Sbjct: 116 NIPISILK---------------------------------------NLKPTNQEMSDLF 136
Query: 180 ---NDKMSSRRRHRAKHQQSVPANNDQSVEDLSDGEEESTGX-XXXXXXXXXXXXCEVTC 235
N S RR + + S N + E++S E G
Sbjct: 137 DTPNKGESESRRLSGQRRVSSRLNKKRVSEEVSASTERLVGIPTTDNAEDDETEEEGSES 196
Query: 236 SKSSRDEFNSDVDSASSNLQDVSD--------GEMNFGKILSKIQRRKK-NAMKWEYQAD 286
S D F D D + ++ + SD GE+ + ++S+++R KK KWEY+AD
Sbjct: 197 EGESLDGFIIDDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKRKWEYEAD 256
Query: 287 MLAEFGKDSELCMKAVCSLYKQQTSEEQMSKESMCHNNRGFSKCDAPRGSDLGEYLTEGD 346
MLA+FGKD ELCM+AVC L++ QT +E++ + S N RGFSK DA RG+ + +LT+GD
Sbjct: 257 MLADFGKDPELCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGD 316
Query: 347 PSGGLKKSVEELQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFF 392
+G +KKSVEEL+ +D + VE+C LA +YSKQL++IY N EDPFF
Sbjct: 317 SAGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPFF 362
>AT5G53220.2 | Symbols: | unknown protein; Has 3081 Blast hits to
2526 proteins in 331 species: Archae - 2; Bacteria -
227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses
- 49; Other Eukaryotes - 1012 (source: NCBI BLink). |
chr5:21596824-21598004 FORWARD LENGTH=368
Length = 368
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 141/286 (49%), Gaps = 52/286 (18%)
Query: 120 NLPISQLKRTHIQKASADRVAMSEDSSLPAAISEDDKVTDNVKIRRRRLQPLRECLSKIH 179
N+PIS LK L+P + +S +
Sbjct: 116 NIPISILK---------------------------------------NLKPTNQEMSDLF 136
Query: 180 ---NDKMSSRRRHRAKHQQSVPANNDQSVEDLSDGEEESTGX-XXXXXXXXXXXXCEVTC 235
N S RR + + S N + E++S E G
Sbjct: 137 DTPNKGESESRRLSGQRRVSSRLNKKRVSEEVSASTERLVGIPTTDNAEDDETEEEGSES 196
Query: 236 SKSSRDEFNSDVDSASSNLQDVSD--------GEMNFGKILSKIQRRKK-NAMKWEYQAD 286
S D F D D + ++ + SD GE+ + ++S+++R KK KWEY+AD
Sbjct: 197 EGESLDGFIIDDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKRKWEYEAD 256
Query: 287 MLAEFGKDSELCMKAVCSLYKQQTSEEQMSKESMCHNNRGFSKCDAPRGSDLGEYLTEGD 346
MLA+FGKD ELCM+AVC L++ QT +E++ + S N RGFSK DA RG+ + +LT+GD
Sbjct: 257 MLADFGKDPELCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGD 316
Query: 347 PSGGLKKSVEELQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFF 392
+G +KKSVEEL+ +D + VE+C LA +YSKQL++IY N EDPFF
Sbjct: 317 SAGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPFF 362
>AT5G53220.1 | Symbols: | unknown protein; Has 3099 Blast hits to
2528 proteins in 332 species: Archae - 2; Bacteria -
245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses
- 49; Other Eukaryotes - 1012 (source: NCBI BLink). |
chr5:21596824-21598004 FORWARD LENGTH=368
Length = 368
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 141/286 (49%), Gaps = 52/286 (18%)
Query: 120 NLPISQLKRTHIQKASADRVAMSEDSSLPAAISEDDKVTDNVKIRRRRLQPLRECLSKIH 179
N+PIS LK L+P + +S +
Sbjct: 116 NIPISILK---------------------------------------NLKPTNQEMSDLF 136
Query: 180 ---NDKMSSRRRHRAKHQQSVPANNDQSVEDLSDGEEESTGX-XXXXXXXXXXXXCEVTC 235
N S RR + + S N + E++S E G
Sbjct: 137 DTPNKGESESRRLSGQRRVSSRLNKKRVSEEVSASTERLVGIPTTDNAEDDETEEEGSES 196
Query: 236 SKSSRDEFNSDVDSASSNLQDVSD--------GEMNFGKILSKIQRRKK-NAMKWEYQAD 286
S D F D D + ++ + SD GE+ + ++S+++R KK KWEY+AD
Sbjct: 197 EGESLDGFIIDDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKRKWEYEAD 256
Query: 287 MLAEFGKDSELCMKAVCSLYKQQTSEEQMSKESMCHNNRGFSKCDAPRGSDLGEYLTEGD 346
MLA+FGKD ELCM+AVC L++ QT +E++ + S N RGFSK DA RG+ + +LT+GD
Sbjct: 257 MLADFGKDPELCMRAVCVLFRFQTEDEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGD 316
Query: 347 PSGGLKKSVEELQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFF 392
+G +KKSVEEL+ +D + VE+C LA +YSKQL++IY N EDPFF
Sbjct: 317 SAGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPFF 362