Miyakogusa Predicted Gene

Lj1g3v0913320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0913320.1 CUFF.26902.1
         (568 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42740.1 | Symbols:  | Sugar isomerase (SIS) family protein |...   974   0.0  
AT4G24620.2 | Symbols: PGI1, PGI | phosphoglucose isomerase 1 | ...   140   3e-33
AT4G24620.1 | Symbols: PGI1, PGI | phosphoglucose isomerase 1 | ...   140   3e-33

>AT5G42740.1 | Symbols:  | Sugar isomerase (SIS) family protein |
           chr5:17136080-17140622 FORWARD LENGTH=560
          Length = 560

 Score =  974 bits (2517), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/557 (83%), Positives = 509/557 (91%), Gaps = 1/557 (0%)

Query: 1   MASST-LISDTQQWNELKVHVESIKKTHLRDLLSDDGRCQSMLVDFDDILLDYSRQQATP 59
           MASST LI DT+ W +LK HVE IKKTHLRDL+SD  RCQSM+++FD +LLDYSRQ+AT 
Sbjct: 1   MASSTALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRATV 60

Query: 60  ETIQKLFNLAEAASLKEKINRMFSGEHINSTEDRSVLHVALRAARDAVIQSDGKNVVPEV 119
           ET+ KL NLA+A+ L EKI+RMF+GEHINSTE+RSVLHVALRA +DAVI++DG NVVPEV
Sbjct: 61  ETMDKLLNLAKASQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGMNVVPEV 120

Query: 120 WSVLDKIKEFSDRVRSGSWVGATGKALKDVVAVGIGGSFLGPLFVHTALQTDPEAIESAR 179
           W+VLDKIKEFSD++RSGSWVGATGK LKDV+A+GIGGSFLGPLFVHTALQTDPEA+ESA+
Sbjct: 121 WNVLDKIKEFSDKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAK 180

Query: 180 GRQLRFLANVDPIDVARNITGLNPETTLVVIVSKTFTTAETMLNARTLREWISSALGPSA 239
           GRQLRFLAN+DP+DVARNI+GLNPETTLVV+VSKTFTTAETMLNARTLREWI++ALG SA
Sbjct: 181 GRQLRFLANIDPVDVARNISGLNPETTLVVVVSKTFTTAETMLNARTLREWITAALGASA 240

Query: 240 VAKHMVAVSTNLTLVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSAIEKFL 299
           VAKHMVAVSTNL LVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFS +EKFL
Sbjct: 241 VAKHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSMVEKFL 300

Query: 300 KGASSMDQHFYSQPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKLAPHIQQVSM 359
           KGASS+DQHF S PFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEK APHIQQVSM
Sbjct: 301 KGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVSM 360

Query: 360 ESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVSL 419
           ESNGKGVSIDG+PLPFE GEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIG+VKSQQPV L
Sbjct: 361 ESNGKGVSIDGLPLPFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIVKSQQPVYL 420

Query: 420 KGEVVSNHDELMSNYFAQPDALAYGKTAEQLQKENVSPHLIPHKTFSGNRXXXXXXXXXX 479
           KGEVVSNHDELMSN+FAQPDALAYGKT EQLQKENVS +LIPHKTFSGNR          
Sbjct: 421 KGEVVSNHDELMSNFFAQPDALAYGKTPEQLQKENVSENLIPHKTFSGNRPSLSLLLPEL 480

Query: 480 XXXXXGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNASRTKGEPVQGF 539
                GQLLAIYEHR+AV+GF+WGINSFDQWGVELGK LATQVRKQL++SRT+G   +GF
Sbjct: 481 TAYNVGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKVLATQVRKQLHSSRTQGTAPEGF 540

Query: 540 NFSTTTVLTRYLQASSE 556
           N+STTT+L RYL+ SSE
Sbjct: 541 NYSTTTLLKRYLETSSE 557


>AT4G24620.2 | Symbols: PGI1, PGI | phosphoglucose isomerase 1 |
           chr4:12709097-12712610 REVERSE LENGTH=570
          Length = 570

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 215/488 (44%), Gaps = 58/488 (11%)

Query: 48  ILLDYSRQQATPETIQKLFNLAEAASLKEKINRMFSGEHINSTEDRSVLHVALRAARDAV 107
           + LD SR   T E + ++    +AA   + +  +  G   N  E R V H  LR ++ A 
Sbjct: 90  LYLDISRVGFTDEFVAEMEPRFQAAF--KAMEDLEKGSIANPDEGRMVGHYWLRNSKLA- 146

Query: 108 IQSDGKNVVPEVWSVLDKIKEFSDRVRSGSWVGATGKA--LKDVVAVGIGGSFLGPLFVH 165
                  +   + + LD I  FSD + SG     +        +++VGIGGS LGP FV 
Sbjct: 147 ---PKPTLKTLIENTLDSICAFSDDIISGKIKPPSSPEGRFTQILSVGIGGSALGPQFVA 203

Query: 166 TALQTDPEAIESARGRQLRFLANVDPIDVARNITGLNPE--TTLVVIVSKTFTTAETMLN 223
            AL  D   +      ++RF+ N DP  +   I  L PE  +TLVV++SK+  T ET   
Sbjct: 204 EALAPDNPPL------KIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNG 257

Query: 224 ARTLREWISSALGPSAVAKHMVAVSTNLTLVEKFGIDPNNA--------FAFWDWVGGRY 275
              +++    A      AK  VA++   +L++      N A        F  +DWVGGR 
Sbjct: 258 LLEVQKAFREA--GLNFAKQGVAITQENSLLD------NTARIEGWLARFPMYDWVGGRT 309

Query: 276 SVCSAVGVLPLSLQYGFSAIEKFLKGASSMDQHFYSQPFEKNIPVLLGLLSVWNVSFLGY 335
           S+ SAVG+LP +LQ G + + + L GA+ MD+   +   + N   LL +   W  + +G 
Sbjct: 310 SIMSAVGLLPAALQ-GIN-VREMLTGAALMDEATRTTSIKNNPAALLAMCWYWASNGVGS 367

Query: 336 PARAILPYSQALEKLAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQ 395
               +LPY  +L   + ++QQ+ MES GK   +DG  +    G   +G  G+  QH++ Q
Sbjct: 368 KDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNTV--NQGLTVYGNKGSTDQHAYIQ 425

Query: 396 LIHQG-RVIPCDFIGVVKSQQPVSLKGEVVSNHDELMSNYFAQPDALAYGKTAEQLQKEN 454
            +  G       FI V++ + P          HD     +  +P           LQ   
Sbjct: 426 QLRDGVHNFFATFIEVLRDRPP---------GHD-----WELEPGVTCGDYLFGMLQGTR 471

Query: 455 VSPHLIPHKTFSGNRXXXXXXXXXXXXXXXGQLLAIYEHRIAVEGFIWGINSFDQWGVEL 514
            +        ++  R               G ++A+YE  + +   I  IN++ Q GVE 
Sbjct: 472 SA-------LYANGRESISVTIQEVTPTSVGAIIALYERAVGLYASIVNINAYHQPGVEA 524

Query: 515 GKSLATQV 522
           GK  A +V
Sbjct: 525 GKKAAAEV 532


>AT4G24620.1 | Symbols: PGI1, PGI | phosphoglucose isomerase 1 |
           chr4:12708972-12712610 REVERSE LENGTH=613
          Length = 613

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 215/488 (44%), Gaps = 58/488 (11%)

Query: 48  ILLDYSRQQATPETIQKLFNLAEAASLKEKINRMFSGEHINSTEDRSVLHVALRAARDAV 107
           + LD SR   T E + ++    +AA   + +  +  G   N  E R V H  LR ++ A 
Sbjct: 90  LYLDISRVGFTDEFVAEMEPRFQAAF--KAMEDLEKGSIANPDEGRMVGHYWLRNSKLA- 146

Query: 108 IQSDGKNVVPEVWSVLDKIKEFSDRVRSGSWVGATGKA--LKDVVAVGIGGSFLGPLFVH 165
                  +   + + LD I  FSD + SG     +        +++VGIGGS LGP FV 
Sbjct: 147 ---PKPTLKTLIENTLDSICAFSDDIISGKIKPPSSPEGRFTQILSVGIGGSALGPQFVA 203

Query: 166 TALQTDPEAIESARGRQLRFLANVDPIDVARNITGLNPE--TTLVVIVSKTFTTAETMLN 223
            AL  D   +      ++RF+ N DP  +   I  L PE  +TLVV++SK+  T ET   
Sbjct: 204 EALAPDNPPL------KIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTPETRNG 257

Query: 224 ARTLREWISSALGPSAVAKHMVAVSTNLTLVEKFGIDPNNA--------FAFWDWVGGRY 275
              +++    A      AK  VA++   +L++      N A        F  +DWVGGR 
Sbjct: 258 LLEVQKAFREA--GLNFAKQGVAITQENSLLD------NTARIEGWLARFPMYDWVGGRT 309

Query: 276 SVCSAVGVLPLSLQYGFSAIEKFLKGASSMDQHFYSQPFEKNIPVLLGLLSVWNVSFLGY 335
           S+ SAVG+LP +LQ G + + + L GA+ MD+   +   + N   LL +   W  + +G 
Sbjct: 310 SIMSAVGLLPAALQ-GIN-VREMLTGAALMDEATRTTSIKNNPAALLAMCWYWASNGVGS 367

Query: 336 PARAILPYSQALEKLAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQ 395
               +LPY  +L   + ++QQ+ MES GK   +DG  +    G   +G  G+  QH++ Q
Sbjct: 368 KDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNTV--NQGLTVYGNKGSTDQHAYIQ 425

Query: 396 LIHQG-RVIPCDFIGVVKSQQPVSLKGEVVSNHDELMSNYFAQPDALAYGKTAEQLQKEN 454
            +  G       FI V++ + P          HD     +  +P           LQ   
Sbjct: 426 QLRDGVHNFFATFIEVLRDRPP---------GHD-----WELEPGVTCGDYLFGMLQGTR 471

Query: 455 VSPHLIPHKTFSGNRXXXXXXXXXXXXXXXGQLLAIYEHRIAVEGFIWGINSFDQWGVEL 514
            +        ++  R               G ++A+YE  + +   I  IN++ Q GVE 
Sbjct: 472 SA-------LYANGRESISVTIQEVTPTSVGAIIALYERAVGLYASIVNINAYHQPGVEA 524

Query: 515 GKSLATQV 522
           GK  A +V
Sbjct: 525 GKKAAAEV 532