Miyakogusa Predicted Gene
- Lj1g3v0912010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0912010.1 Non Chatacterized Hit- tr|I1KAG9|I1KAG9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide
repeat; PPR_2,Penta,CUFF.26510.1
(629 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 578 e-165
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 1e-97
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 288 8e-78
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 6e-77
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 1e-75
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 273 3e-73
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 6e-73
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 4e-72
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 6e-72
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 260 3e-69
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 257 2e-68
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 256 4e-68
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 253 4e-67
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 7e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 7e-67
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 248 6e-66
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 246 3e-65
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 243 2e-64
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 243 4e-64
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 6e-63
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 238 7e-63
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 235 6e-62
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 235 6e-62
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 232 5e-61
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 231 1e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 229 4e-60
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 5e-60
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 226 3e-59
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 7e-59
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 223 5e-58
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 223 5e-58
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 7e-58
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 220 2e-57
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 218 9e-57
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 216 3e-56
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 8e-55
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 210 3e-54
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 5e-54
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 8e-54
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 208 9e-54
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 204 1e-52
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 7e-52
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 2e-51
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 2e-51
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 3e-51
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 191 1e-48
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 191 2e-48
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 185 1e-46
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 3e-46
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 3e-46
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 183 4e-46
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 179 6e-45
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 8e-45
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 174 2e-43
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 4e-43
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 171 1e-42
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 7e-42
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 7e-41
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 9e-40
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 4e-38
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 149 7e-36
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 5e-34
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 105 9e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 98 2e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 96 1e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 4e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 6e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 87 4e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 86 1e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 2e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 4e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 76 6e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 74 4e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 7e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 72 1e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 3e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 63 7e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 1e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 2e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 6e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 56 7e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 54 3e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 54 4e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 6e-06
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/607 (46%), Positives = 408/607 (67%), Gaps = 2/607 (0%)
Query: 17 YCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDI 76
Y S L++ L KS KIVHA L+ G TY GNRCL LY G + +AL++FDDI
Sbjct: 6 YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65
Query: 77 SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFV 136
KN+ +WN+CLKGL K+G L NA LFD MP RDVVSWN+MISG S GF + +F
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 137 EMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+MQ +RP+ FTFSIL SLV+ H +Q+HG I SG+ N+V+ NS++ MY ++G+
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
DY+ SV LTM+ D++SWN L+ +C +G+ E+AL F+ MR+ E+ PD++T S ++S+C
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
S+LR+L KGKQ A C K+GF+ NSIV A ID+FSKCNRL+DSV+LF E ++WD+ LC
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
SMI SY+ H GEDAL LF+L + +++RP ++ S +LSS + + ++ G +H+LV KL
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKL 364
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
GF+ D +A++L+ MY K G +D A+ +F +T KDL+ WNT++MGLA N + +L +F
Sbjct: 365 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 437 KELI-REGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
+L+ + + PDR+TL +L+AC Y FV+EGI+IF SME GV PG EHY ++E+L
Sbjct: 425 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 484
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLV 555
+ GM+ EA DI + +P+ + +W IL + GD ++ ETVAK ++E EP++ FPYLV
Sbjct: 485 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 544
Query: 556 LAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXX 615
L + Y+M RWE+ V++R M + K G S +++ V++F+++QLQ +GG D
Sbjct: 545 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCAL 604
Query: 616 XXXXVWE 622
W+
Sbjct: 605 LDLLSWD 611
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/657 (31%), Positives = 343/657 (52%), Gaps = 43/657 (6%)
Query: 12 YTSLSYCSTLLDHCLSQK-SVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDAL 70
+T S + LLD C+ K S +V+ VHA +K G + ++ NR +D YS G + D
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 71 KVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSD 130
+VFD + +N +WN + GL K G L A LF MP RD +WNSM+SG+A + +
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 131 ALELFVEMQGAGMRPSSFTFSILTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLI 187
AL F M G + ++F+ + S S QVH I +S LS+V +G++L+
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALV 194
Query: 188 AMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQF 247
MY K G V+ + V M +++SWNSL+ + G AL F M ++ + PD+
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV-SSAAIDLFSKCNRLEDSVRLFTE 306
T ++++S C++L + G++V K + N I+ S+A +D+++KC+R++++ +F
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 307 QDRWDTALCTSMISSYA-------------------------------THDLGEDALHLF 335
+ TSMIS YA + E+AL LF
Sbjct: 315 MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF------ESDAVLASTLV 389
L RE++ PT Y + +L + + + +G+Q H V K GF E D + ++L+
Sbjct: 375 CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MY K G +++ +F + +D VSWN +++G A NG + L+LF+E++ G PD I
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
T+ VL AC + FV+EG F SM +FGV P +HYT +V++L +AG L+EA ++E
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESL 569
MP +W +L+ C +H ++ + + VA++++E EP PY++L+ Y +G+WE +
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 614
Query: 570 VRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETE 626
+ VRK M ++ + GCSW ++ H + F H K + EM E
Sbjct: 615 MNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/689 (30%), Positives = 336/689 (48%), Gaps = 80/689 (11%)
Query: 19 STLLDHC--LSQKSVN------FVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDAL 70
STLL+ C L QKSVN ++VH +K GL YL N +++YS G+ A
Sbjct: 10 STLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHAR 69
Query: 71 KVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSD 130
K+FD++ + + SWN L K G + + C+ FD +P RD VSW +MI GY + G
Sbjct: 70 KLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK 129
Query: 131 ALELFVEMQGAGMRPSSFTFS-ILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLI 187
A+ + +M G+ P+ FT + +L S+ ++ C K+VH I++ G+ NV + NSL+
Sbjct: 130 AIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR-GNVSVSNSLL 188
Query: 188 AMYGK-------------------------------VGLVDYSFSVILTMKKIDIISWNS 216
MY K VG +D + + M + DI++WNS
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 217 LMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
++ ++ G+ AL F KM RD+ L PD+FT ++++S C+NL L GKQ+ +
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD------TALC-------------- 315
GF + IV +A I ++S+C +E + RL ++ D TAL
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 316 -------------TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
T+MI Y H +A++LF + RP Y ++ +LS S
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI-KDLVSWNTIMM 421
+ G QIH K G +++ L+ MYAK G I A F+ + +D VSW ++++
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVK 481
LA +G L+LF+ ++ EG+ PD IT V AC + V++G + F M+ +
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 482 PGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKE 541
P HY +V++ +AG+L+EA + +E MP + W +LS C +H ++ + + A+
Sbjct: 549 PTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAER 608
Query: 542 IMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQS 601
++ EP+ Y LA Y G+WE ++RK M+ K+ G SW +K+ V+ F
Sbjct: 609 LLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGV 668
Query: 602 NQLQHYGGKDXXXXXXXXVW-EMETEGYV 629
H K+ +W E++ GYV
Sbjct: 669 EDGTH-PEKNEIYMTMKKIWDEIKKMGYV 696
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/614 (28%), Positives = 304/614 (49%), Gaps = 38/614 (6%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLK-LGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
LL + +S S+ ++VHA +K L +L N +++YS L H A V
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT--- 68
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
P R+VVSW S+ISG A NG S AL F EM+
Sbjct: 69 ----------------------------PARNVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 140 GAGMRPSSFTFSILTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
G+ P+ FTF V+S P KQ+H ++ G L +V +G S MY K L
Sbjct: 101 REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL-DVFVGCSAFDMYCKTRLR 159
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
D + + + + ++ +WN+ + G A+ F + R + P+ T ++ C
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
S+ L+ G Q+ + GF + V + ID + KC ++ S +FTE +
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
S++++Y + E A L++ + ++ + +++M+S +LS+ + +E+G IHA K
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
E + S LV MY K G I+D+ F+E K+LV+ N+++ G A+ G+V + L LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 437 KELIREGMA--PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
+E+ G P+ +T ++L AC+ V+ G+KIF SM + +G++PG EHY+ +V+ML
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYL 554
+AGM++ A + ++ MP T+ +W + + C +HG Q+ A+ + + +P+ ++
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 555 VLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXX 614
+L+ + GRW VR++++ K+ G SW +KN V+ FQ+ H K+
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579
Query: 615 XXXXXVWEMETEGY 628
EME GY
Sbjct: 580 TLAKLRNEMEAAGY 593
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S++L C + + +HAH +K + ++G+ +D+Y G I D+ + FD++
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 373
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGM------PVRDVVSWNSMISGYASNGFSSDAL 132
KN + N + G GQ+ A LF+ M P + +++ S++S + G + +
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 133 ELFVEMQGA-GMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYG 191
++F M+ G+ P + +S ++ M G
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSC---------------------------------IVDMLG 460
Query: 192 KVGLVDYSFSVILTMKKIDIIS-WNSLMWACHRAGHHELAL 231
+ G+V+ ++ I M IS W +L AC G +L L
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/634 (30%), Positives = 323/634 (50%), Gaps = 19/634 (2%)
Query: 8 TQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHIN 67
Q P+ ++ LL ++++ + K +HA ++K + + TYL N ++LYS G ++
Sbjct: 2 NQTPWKFKTFRDLLLK-SVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60
Query: 68 DALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGF 127
A F N S+N+ +K K ++ A QLFD +P D VS+N++ISGYA
Sbjct: 61 YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120
Query: 128 SSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHA----KQVHGRIIRSGMDLSNVVLG 183
+ A+ LF M+ G FT L+ L+++ C KQ+H + G D S +
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFT---LSGLIAACCDRVDLIKQLHCFSVSGGFD-SYSSVN 176
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKKI-DIISWNSLM--WACHRAGHHELALAHFYKMRDA 240
N+ + Y K GL+ + SV M ++ D +SWNS++ + H+ G LAL + +M
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALAL--YKEMIFK 234
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKC---NRL 297
D FT +++++ ++L L G+Q K GF NS V S ID +SKC + +
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYA-THDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
DS ++F E D + +MIS Y+ +L E+A+ F R RP + C+ S+
Sbjct: 295 YDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354
Query: 357 FSIFLPVEVGIQIHALVPKLGFESDAV-LASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
S QIH L K S+ + + + L+ +Y K G + DA +F+ + VS
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
+N ++ G A +G + L L++ ++ G+AP++IT AVL AC + VDEG + F +M+
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVI 535
F ++P EHY+ ++++L +AG L+EA ++ MPY W +L C H ++ +
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 536 ETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNH 595
E A E+M +P A PY++LA Y +WE + VRK M K ++ GCSW +K
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKK 594
Query: 596 VYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
+ F + H ++ + +M+ GYV
Sbjct: 595 KHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 187/681 (27%), Positives = 323/681 (47%), Gaps = 83/681 (12%)
Query: 26 LSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWN 85
L + S+ + VH + + G ++ NR +D+Y +N A ++FD+IS + +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 86 ICLKGLLKSGQLGNACQLFDGMPV--RDVVSWNSMISGYASNGFSSDALELFVEMQGAGM 143
+ G SG + A +F+ PV RD V +N+MI+G++ N A+ LF +M+ G
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 144 RPSSFTF-SILTSLVSSPCHAKQV---HGRIIRSGMDLSNVVLGNSLIAMYGKVG----L 195
+P +FTF S+L L KQ H ++SG V N+L+++Y K L
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV-SNALVSVYSKCASSPSL 203
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHEL-------------------------- 229
+ + V + + D SW ++M + G+ +L
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 230 ------ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK---VGFVY- 279
AL +M + + D+FT +++ C+ L GKQV A+ + F +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD----TALCTS------------------ 317
NS+VS L+ KC + +++ +F + D AL +
Sbjct: 324 NSLVS-----LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 318 ---------MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ 368
MIS A + GE+ L LF RE P +Y S + S ++ G Q
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
HA + K+GF+S + L+ MYAK G++++A +F D VSWN ++ L +G
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYT 488
+ +D+++E++++G+ PDRITL VL AC++ VD+G K F SMET + + PG +HY
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQ 548
++++L ++G +A ++E++P+ T ++W +LS C +HG++++ A ++ P+
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 549 APFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYG 608
Y++L+ + G+WE + RVRK M + K+ + CSW M+ V+TF + H
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 609 GKDXXXXXXXXVWEMETEGYV 629
+ EM GYV
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYV 699
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 141/253 (55%), Gaps = 5/253 (1%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+++ C + + K VHA+ L+ ++ + N + LY G ++A +F+ + K
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+ SWN L G + SG +G A +F M ++++SW MISG A NGF + L+LF M+
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 140 GAGMRPSSFTFSILT---SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
G P + FS +++ + C+ +Q H ++++ G D S++ GN+LI MY K G+V
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD-SSLSAGNALITMYAKCGVV 468
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ + V TM +D +SWN+L+ A + GH A+ + +M + PD+ T T+++ C
Sbjct: 469 EEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Query: 257 SNLRDLDKGKQVF 269
S+ +D+G++ F
Sbjct: 529 SHAGLVDQGRKYF 541
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/624 (27%), Positives = 307/624 (49%), Gaps = 38/624 (6%)
Query: 16 SYCSTLLDHCLSQKSVN---FVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKV 72
+Y S + C+ + N +VK++H + ++ T+L N + Y+ + A +V
Sbjct: 4 NYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV 63
Query: 73 FDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL 132
FD I N SWN L K+G + F+ +P RD V+WN +I GY+ +G A+
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 133 ELF-VEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIA 188
+ + M+ + T + L SS H KQ+HG++I+ G + S +++G+ L+
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVGSPLLY 182
Query: 189 MYGKVGLVDYSFSVILTMKKIDIISWNSLM-------------------------WACHR 223
MY VG + + V + + + +NSLM WA
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI 242
Query: 224 AGHHELALAH-----FYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV 278
G + LA F +M+ L DQ+ +++ C L +++GKQ+ A + F
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLT 338
+ V SA ID++ KC L + +F + + T+M+ Y E+A+ +F+
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 339 LRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGII 398
R I P Y + +S+ + +E G Q H G ++++LV +Y K G I
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 399 DDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
DD+ +FNE ++D VSW ++ A G+ T+ LF ++++ G+ PD +TL V+ AC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 459 NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDM 518
+ V++G + F M +E+G+ P HY+ ++++ S++G L+EA+ + MP+
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 519 WRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQ 578
W +LS C G+L++ + A+ ++E +P P Y +L+ Y G+W+S+ ++R+ M +
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 579 KCTKEFIGCSWFGMKNHVYTFQSN 602
K K+ G SW K +++F ++
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSAD 626
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 284/540 (52%), Gaps = 10/540 (1%)
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILT 154
+ G A +FD M RD++SWNS+I+G A NG +A+ LF+++ G++P +T S+L
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 155 SLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
+ S P +KQVH I+ ++S+ + +LI Y + + + ++ D+
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKIN-NVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDL 482
Query: 212 ISWNSLM--WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
++WN++M + GH L L F M D FT +T+ C L +++GKQV
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKL--FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
A+ K G+ + VSS +D++ KC + + F D T+MIS + E
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
A H+F + P E+ ++ L + S +E G QIHA KL +D + ++LV
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MYAK G IDDA +F ++ ++ +WN +++GLA +G+ TL LFK++ G+ PD++
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
T VL AC++ V E K SM ++G+KP EHY+ + + L +AG++K+A +++E+
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESL 569
M + M+R +L+ C + GD + + VA +++E EP Y++L+ Y +W+ +
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 570 VRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
R M+ K+ G SW +KN ++ F + + + + +++ EGYV
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/562 (23%), Positives = 253/562 (45%), Gaps = 46/562 (8%)
Query: 12 YTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALK 71
YTS S +L CL V + H + K+GL+ ++ +++Y G + +
Sbjct: 142 YTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKV 201
Query: 72 VFDDISHKNSTSWNICLKGLLK-------------------------------------- 93
+F+++ +++ WN+ LK L+
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD 261
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
+GQ+ + D V +++ N +S Y +G S L+ F +M + + TF ++
Sbjct: 262 AGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM 321
Query: 154 TSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
+ V S +QVH ++ G+DL + + NSLI MY K+ ++ +V M + D
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLM-LTVSNSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD-LDKGKQVF 269
+ISWNS++ + G A+ F ++ L PDQ+T ++++ S+L + L KQV
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
K+ V +S VS+A ID +S+ NR + E+ +D +M++ Y G
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGH 499
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
L LF L ++ R ++ ++ + + + G Q+HA K G++ D ++S ++
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 559
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MY K G + A F+ + D V+W T++ G NG+ +F ++ G+ PD
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 619
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
T+A + A + + +++G +I + + T +V+M +K G + +A + +
Sbjct: 620 TIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKR 678
Query: 510 MPYTITLDMWRLILSVCVIHGD 531
+ + + W +L HG+
Sbjct: 679 IE-MMNITAWNAMLVGLAQHGE 699
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 171/387 (44%), Gaps = 46/387 (11%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFS-----SDALELFVEMQGAGMRPSS 147
K G L A ++FD MP RD+VSWNS+++ YA + A LF ++ + S
Sbjct: 86 KCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSR 145
Query: 148 FTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
T S + L + ++ HG + G+D V G +L+ +Y K G V +
Sbjct: 146 MTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG-ALVNIYLKFGKVKEGKVLFE 204
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
M D++ WN ++ A G E A+ + L P++ T L + + D D
Sbjct: 205 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD--DSDA 262
Query: 265 GK-QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
G+ + FA V I + + + + ++ F + M+ S
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFAD-----------MVES-- 309
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV 383
D+ D + F+L L ++ + +G Q+H + KLG +
Sbjct: 310 --DVECDQV-TFILMLATAVKVDS---------------LALGQQVHCMALKLGLDLMLT 351
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
++++L++MY K A +F+ +DL+SWN+++ G+A NG + LF +L+R G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKI 470
+ PD+ T+ +VL A S + EG+ +
Sbjct: 412 LKPDQYTMTSVLKA---ASSLPEGLSL 435
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 37/258 (14%)
Query: 5 LKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLG 64
L QG + +T+ C ++N K VHA+ +K G + ++ + LD+Y
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY---- 562
Query: 65 HINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYAS 124
+K G + A FD +PV D V+W +MISG
Sbjct: 563 ---------------------------VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 125 NGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSN-V 180
NG A +F +M+ G+ P FT + L +S +++ +Q+H ++ ++ +N
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK--LNCTNDP 653
Query: 181 VLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDA 240
+G SL+ MY K G +D ++ + ++ ++I +WN+++ + G + L F +M+
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 241 ELLPDQFTCSTLMSVCSN 258
+ PD+ T ++S CS+
Sbjct: 714 GIKPDKVTFIGVLSACSH 731
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD--LGEDALHL 334
F+ N+++S ++SKC L + R+F + D S++++YA + E+
Sbjct: 75 FLINNLIS-----MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 335 FVL--TLRENIRPTEYMVS------CLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
F+L LR+++ T M CL S + V H K+G + D +A
Sbjct: 130 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGY-----VWASESFHGYACKIGLDGDEFVAG 184
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
LV++Y KFG + + +F E +D+V WN ++ G +DL G+ P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 447 DRITLAAVLLACNYGSFVDEG 467
+ ITL LLA G D G
Sbjct: 245 NEITLR--LLARISGDDSDAG 263
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+HA+ LKL ++G +D+Y+ G I+DA +F I N T+WN L GL + G+
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 97 LGNACQLFDGMPV----RDVVSWNSMISGYASNGFSSDALELFVEMQGA-GMRPSSFTFS 151
QLF M D V++ ++S + +G S+A + M G G++P +S
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 152 ILTSLVSSPCHAKQVHGRIIRSGMDLS 178
L + KQ I M+ S
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEAS 786
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
K H RI+ + ++ N+LI+MY K G + Y+ V M D++SWNS++ A
Sbjct: 58 GKCTHARILTFEENPERFLI-NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 223 RAG-----HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF 277
++ + + A F +R + + T S ++ +C + + + + K+G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 278 VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVL 337
+ V+ A ++++ K ++++ LF E D L M+ +Y E+A+ L
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 338 TLRENIRPTEYMVSCL 353
+ P E + L
Sbjct: 237 FHSSGLNPNEITLRLL 252
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA 424
+G HA + + L + L+ MY+K G + A +F++ +DLVSWN+I+ A
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 425 YNGKVSV-----TLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFG 479
+ + V LF+ L ++ + R+TL+ +L C + +V + F + G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIG 175
Query: 480 VKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
+ E +V + K G +KE + E MPY + +W L+L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV-LWNLML 218
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/573 (28%), Positives = 290/573 (50%), Gaps = 35/573 (6%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+HA+ KLG + + L+LY+ I AL F +
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE------------------- 451
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTS 155
V +VV WN M+ Y ++ +F +MQ + P+ +T+ SIL +
Sbjct: 452 ------------VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 156 LV--SSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
+ +Q+H +II++ L N + + LI MY K+G +D ++ +++ D++S
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQL-NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
W +++ + + AL F +M D + D+ + +S C+ L+ L +G+Q+ A
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
GF + +A + L+S+C ++E+S F + + D +++S + E+AL
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 334 LFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYA 393
+FV RE I + + + S ++ G Q+HA++ K G++S+ + + L+ MYA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 394 KFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
K G I DA F E K+ VSWN I+ + +G S LD F ++I + P+ +TL
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
VL AC++ VD+GI F SM +E+G+ P EHY VV+ML++AG+L A + ++ MP
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 514 ITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVR 573
+WR +LS CV+H ++++ E A ++E EP+ Y++L+ Y + +W++ R
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 574 KDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ M++K K+ G SW +KN +++F H
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNH 951
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 222/456 (48%), Gaps = 36/456 (7%)
Query: 19 STLLDHCLSQK-SVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
S +L+ C + + V+ +HA L GL T + N +DLYS G ++ A +VFD
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD--- 246
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
G+ ++D SW +MISG + N ++A+ LF +
Sbjct: 247 ----------------------------GLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 138 MQGAGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
M G+ P+ + FS + S + S +Q+HG +++ G S+ + N+L+++Y +G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS-SDTYVCNALVSLYFHLG 337
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
+ + + M + D +++N+L+ + G+ E A+ F +M L PD T ++L+
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
CS L +G+Q+ A+ K+GF N+ + A ++L++KC +E ++ F E + + L
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
M+ +Y D ++ +F E I P +Y +L + +E+G QIH+ +
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
K F+ +A + S L+ MYAK G +D A I KD+VSW T++ G L
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
F++++ G+ D + L + AC + EG +I
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 228/488 (46%), Gaps = 36/488 (7%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S++L C +S+ + +H LKLG ++ TY+ N + LY LG++ A +F ++S
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ 351
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+++ ++N + GL + G+ A+ELF M
Sbjct: 352 RDAVTYNTLINGL-------------------------------SQCGYGEKAMELFKRM 380
Query: 139 QGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
G+ P S T + L S+ +Q+H + G +N + G +L+ +Y K
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCAD 439
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
++ + L + +++ WN ++ A + F +M+ E++P+Q+T +++
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C L DL+ G+Q+ + K F N+ V S ID+++K +L+ + + D
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
T+MI+ Y ++ + AL F L IR E ++ +S+ + ++ G QIHA
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
GF SD + LV +Y++ G I+++ F +T+ D ++WN ++ G +G L +
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
F + REG+ + T + + A + + + +G ++ ++ T+ G E ++ M +
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYA 738
Query: 496 KAGMLKEA 503
K G + +A
Sbjct: 739 KCGSISDA 746
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 225/496 (45%), Gaps = 46/496 (9%)
Query: 21 LLDHCL-SQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
LL+ CL + S++ + +H+ LKLGL++ L + D Y G + A KVFD+
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE---- 145
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
MP R + +WN MI AS + LFV M
Sbjct: 146 ---------------------------MPERTIFTWNKMIKELASRNLIGEVFGLFVRMV 178
Query: 140 GAGMRPSSFTFSILTSLVSSPCHA----KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+ P+ TFS + A +Q+H RI+ G+ S VV N LI +Y + G
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGF 237
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
VD + V ++ D SW +++ + A+ F M ++P + S+++S
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C + L+ G+Q+ K+GF ++ V +A + L+ L + +F+ + D
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
++I+ + GE A+ LF + + P ++ L+ + S + G Q+HA K
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
LGF S+ + L+++YAK I+ AL F ET+++++V WN +++ + + +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV----V 491
F+++ E + P++ T ++L C ++ G +I + +K + YV +
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI-----IKTNFQLNAYVCSVLI 532
Query: 492 EMLSKAGMLKEAIDIV 507
+M +K G L A DI+
Sbjct: 533 DMYAKLGKLDTAWDIL 548
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 165/563 (29%), Positives = 291/563 (51%), Gaps = 37/563 (6%)
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
G A K+FD++ ++ SWN+ +KG +++ LG A +LF+ MP RDV SWN+M+SGYA
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYA 168
Query: 124 SNGFSSDALELFVEM----------------QGAGMRPSSFTFSILT--SLVSSPC---- 161
NG DA +F M Q + M + F +LVS C
Sbjct: 169 QNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG 228
Query: 162 ---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
K V R M++ +VV N++I Y + G +D + + D+ +W +++
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF--CFKVG 276
+ E A F KM + ++ + + +++ ++ K++F C V
Sbjct: 289 SGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFV 336
+N++++ +++C ++ ++ LF + + D +MI+ Y+ +AL LFV
Sbjct: 345 -TWNTMITG-----YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFG 396
RE R S LS+ + + +E+G Q+H + K G+E+ + + L+ MY K G
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 397 IIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLL 456
I++A +F E KD+VSWNT++ G + +G V L F+ + REG+ PD T+ AVL
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 457 ACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITL 516
AC++ VD+G + F++M ++GV P +HY +V++L +AG+L++A ++++ MP+
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 517 DMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDM 576
+W +L +HG+ ++ ET A +I EP+ Y++L+ Y GRW + ++R M
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 577 EQKCTKEFIGCSWFGMKNHVYTF 599
K K+ G SW ++N +TF
Sbjct: 639 RDKGVKKVPGYSWIEIQNKTHTF 661
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 211/467 (45%), Gaps = 38/467 (8%)
Query: 84 WNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGM 143
WN+ + +++G+ A ++F MP VS+N MISGY NG A +LF EM
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----- 121
Query: 144 RPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI 203
P S + + R + M +V N++++ Y + G VD + SV
Sbjct: 122 -PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 204 LTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLD 263
M + + +SWN+L+ A + E A F + L+ + C L+ + +
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV--SWNC--LLGGFVKKKKIV 236
Query: 264 KGKQVF-AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSY 322
+ +Q F + + +N+I++ +++ +++++ +LF E D T+M+S Y
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVSGY 291
Query: 323 ATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDA 382
+ + E+A LF N E + +L+ + +E+ ++ ++P +
Sbjct: 292 IQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVMPC----RNV 343
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
+T++ YA+ G I +A ++F++ +D VSW ++ G + +G L LF ++ RE
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 443 GMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVE----MLSKAG 498
G +R + ++ L C ++ G ++ + VK G E +V M K G
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRL-----VKGGYETGCFVGNALLLMYCKCG 458
Query: 499 MLKEAIDIVETMPYTITLDMWRLILSVCVIHG----DLQVIETVAKE 541
++EA D+ + M + W +++ HG L+ E++ +E
Sbjct: 459 SIEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFGEVALRFFESMKRE 504
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 152/337 (45%), Gaps = 31/337 (9%)
Query: 178 SNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM 237
S++ N I+ Y + G + + V M + +S+N ++ R G ELA F +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 238 RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV-YNSIVSSAAIDLFSKCNR 296
+ +L+ + + ++ R+L K +++F + +N+++S +++
Sbjct: 122 PERDLV----SWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG-----YAQNGC 172
Query: 297 LEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
++D+ +F + +++S+Y + E+A LF REN + +CLL
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF--KSRENWALVSW--NCLLGG 228
Query: 357 FSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSW 416
F + ++ + D V +T++ YA+ G ID+A +F+E+ ++D+ +W
Sbjct: 229 FVKKKKI---VEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 417 NTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMET 476
++ G N V +LF ++ P+R ++ + Y +G ++ + E
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGY----VQGERMEMAKEL 334
Query: 477 EFGVKPGEEHYTY--VVEMLSKAGMLKEAIDIVETMP 511
F V P T+ ++ ++ G + EA ++ + MP
Sbjct: 335 -FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
+ +G + S S+ L C ++ K +H +K G T ++GN L +Y G I
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
+A +F +++ K+ SW N+MI+GY+ +G
Sbjct: 461 EEANDLFKEMAGKDIVSW-------------------------------NTMIAGYSRHG 489
Query: 127 FSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV-HGRIIRSGMDLSNVVLGNS 185
F AL F M+ G++P T + +++S+ H V GR M V+ NS
Sbjct: 490 FGEVALRFFESMKREGLKPDDAT---MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 186 -----LIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELA 230
++ + G+ GL++ + +++ M + D W +L+ A G+ ELA
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 280/514 (54%), Gaps = 8/514 (1%)
Query: 100 ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI---LTSL 156
A ++FD MP R+VVSW++++SG+ NG +L LF EM G+ P+ FTFS L
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 157 VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNS 216
+++ Q+HG ++ G ++ V +GNSL+ MY K G ++ + V + +ISWN+
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMM-VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 217 LMWACHRAGHHELALAHFYKMRDAEL--LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
++ AG+ AL F M++A + PD+FT ++L+ CS+ + GKQ+ F +
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 275 VGF--VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
GF ++ ++ + +DL+ KC L + + F + +S+I YA +A+
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
LF N + + +S ++ F+ F + G Q+ AL KL + + +++V MY
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 393 AKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLA 452
K G++D+A F E ++KD++SW ++ G +G ++ +F E++R + PD +
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 453 AVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPY 512
AVL AC++ + EG ++F + G+KP EHY VV++L +AG LKEA +++TMP
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 513 TITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRV 572
+ +W+ +LS+C +HGD+++ + V K ++ + + P Y++++ Y G W
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNA 538
Query: 573 RKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
R+ K K+ G SW ++ V+ F+S + H
Sbjct: 539 RELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 572
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 205/441 (46%), Gaps = 39/441 (8%)
Query: 9 QGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHIND 68
QG Y + ST L C ++ +H LK+G +GN +D+YS G IN+
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 69 ALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFS 128
A KVF I R ++SWN+MI+G+ G+
Sbjct: 161 AEKVFRRIVD-------------------------------RSLISWNAMIAGFVHAGYG 189
Query: 129 SDALELFVEMQGAGM--RPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDL-SNVVL 182
S AL+ F MQ A + RP FT + L SS KQ+HG ++RSG S+ +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
SL+ +Y K G + + +K+ +ISW+SL+ + G A+ F ++++
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
D F S+++ V ++ L +GKQ+ A K+ + V ++ +D++ KC ++++ +
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
F E D T +I+ Y H LG+ ++ +F LR NI P E +LS+ S
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 363 VEVGIQIHA-LVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIM 420
++ G ++ + L+ G + + +V + + G + +A H+ + IK V W T++
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 421 MGLAYNGKVSVTLDLFKELIR 441
+G + + ++ K L+R
Sbjct: 490 SLCRVHGDIELGKEVGKILLR 510
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 242 LLPDQF-TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
++P+Q +++ VC+ D+G QV + K G N I S+ ID++ KC +
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 301 VRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIF 360
++F + ++++S + + + +L LF R+ I P E+ S L + +
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 361 LPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIM 420
+E G+QIH K+GFE + ++LV MY+K G I++A +F + L+SWN ++
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 421 MGLAYNGKVSVTLDLFKELIREGMA--PDRITLAAVLLACNYGSFVDEGIKI 470
G + G S LD F + + PD TL ++L AC+ + G +I
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 174/576 (30%), Positives = 289/576 (50%), Gaps = 39/576 (6%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +HA +KLG + Y+ N + LY LG DA KVF++
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE------------------- 190
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSF-TFSIL 153
MP RD+VSWNSMISGY + G +L LF EM G +P F T S L
Sbjct: 191 ------------MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSAL 238
Query: 154 --TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
S V SP K++H +RS ++ +V++ S++ MY K G V Y+ + M + +I
Sbjct: 239 GACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNI 298
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
++WN ++ R G A F KM + L PD T L+ + L +G+ +
Sbjct: 299 VAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHG 354
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGED 330
+ + GF+ + ++ +A ID++ +C +L+ + +F + S+I++Y +
Sbjct: 355 YAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVH 390
AL LF ++ P ++ +L +++ L + G +IHA + K + S+ ++ ++LVH
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 391 MYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT 450
MYA G ++DA FN +KD+VSWN+I+M A +G +++ LF E+I + P++ T
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534
Query: 451 LAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
A++L AC+ VDEG + F SM+ E+G+ PG EHY +++++ + G A +E M
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Query: 511 PYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLV 570
P+ T +W +L+ H D+ + E A++I + E Y++L Y GRWE +
Sbjct: 595 PFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVN 654
Query: 571 RVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
R++ ME K S K + F + H
Sbjct: 655 RIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSH 690
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 199/427 (46%), Gaps = 16/427 (3%)
Query: 53 GNRCLDLYSDLGH-----INDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGM 107
GNR L+ S + + D KV + N + L+G S + +A QLFD M
Sbjct: 34 GNRNLEFDSGISKPARLVLRDRYKVTKQV---NDPALTRALRGFADSRLMEDALQLFDEM 90
Query: 108 PVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLV---SSPCHAK 164
D WN MI G+ S G +A++ + M AG++ +FT+ + V SS K
Sbjct: 91 NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGK 150
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
++H +I+ G +S+V + NSLI++Y K+G + V M + DI+SWNS++
Sbjct: 151 KIHAMVIKLGF-VSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI-V 283
G +L F +M PD+F+ + + CS++ GK++ + + V
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
++ +D++SK + + R+F + + MI YA + DA F +N
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
+ + S L S L G IH + GF VL + L+ MY + G + A
Sbjct: 330 LQPDVITSINLLPASAILE---GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEV 386
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
IF+ K+++SWN+I+ NGK L+LF+EL + PD T+A++L A
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446
Query: 464 VDEGIKI 470
+ EG +I
Sbjct: 447 LSEGREI 453
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 161/339 (47%), Gaps = 10/339 (2%)
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
L++ + + M K D WN ++ G + A+ + +M A + D FT ++
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
+ + L++GK++ A K+GFV + V ++ I L+ K D+ ++F E D
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
SMIS Y G +L LF L+ +P + L + S ++G +IH
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 375 KLGFES-DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
+ E+ D ++ ++++ MY+K+G + A IFN +++V+WN ++ A NG+V+
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 434 DLFKELIRE-GMAPDRITLAAVLLACNYGSFVDEGIKIF-FSMETEFGVKPGEEHYTYVV 491
F+++ + G+ PD IT +L A S + EG I ++M G P T ++
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRR--GFLPHMVLETALI 372
Query: 492 EMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
+M + G LK A I + M + W I++ V +G
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAAYVQNG 410
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 296/563 (52%), Gaps = 13/563 (2%)
Query: 73 FDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL 132
F DI S C GL++ G ++F MP R+ +W++M+SGYA+ G +A+
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDG-----LKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 133 E---LFVEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSL 186
+ LF+ + G S + F+ + S +++ + +Q+H I++G+ L V L N+L
Sbjct: 205 KVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNAL 262
Query: 187 IAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQ 246
+ MY K ++ + + + + I+W++++ + G A+ F +M A + P +
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 247 FTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
+T +++ CS++ L++GKQ+ +F K+GF + ++A +D+++K L D+ + F
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 307 QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG 366
D AL TS+IS Y + E+AL L+ I P + ++ +L + S +E+G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 367 IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYN 426
Q+H K GF + + S L MY+K G ++D +F T KD+VSWN ++ GL++N
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 427 GKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEH 486
G+ L+LF+E++ EGM PD +T ++ AC++ FV+ G F M + G+ P +H
Sbjct: 503 GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDH 562
Query: 487 YTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMERE 546
Y +V++LS+AG LKEA + +E+ L +WR++LS C HG ++ +++M
Sbjct: 563 YACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Query: 547 PQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ Y+ L+ Y +GR + RV K M + +GCSW +KN + F H
Sbjct: 623 SRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMH 682
Query: 607 YGGKDXXXXXXXXVWEMETEGYV 629
++ +M EG+V
Sbjct: 683 PMIEETKDLVCLVSRQMIEEGFV 705
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 235/480 (48%), Gaps = 31/480 (6%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDA---LELFVEMQGA 141
N+ + K G+L A +F+ + +DVVSWNS+I+GY+ NG S + ++LF EM+
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 142 GMRPSSFT----FSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
+ P+++T F +SL SS +Q H +++ ++ + SL+ MY K GLV+
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTV-GRQAHALVVKMS-SFGDIYVDTSLVGMYCKAGLVE 170
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK-MRDAELLPDQ-FTCSTLMSV 255
V M + + +W++++ G E A+ F +R+ E D + + ++S
Sbjct: 171 DGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSS 230
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
+ + G+Q+ K G + +S+A + ++SKC L ++ ++F ++
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
++M++ Y+ + +A+ LF I+P+EY + +L++ S +E G Q+H+ + K
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
LGFE + LV MYAK G + DA F+ + +D+ W +++ G N L L
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEG-------IKIFFSMETEFGVKPGEEHYT 488
++ + G+ P+ T+A+VL AC+ + ++ G IK F +E G +
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--------S 462
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGD----LQVIETVAKEIME 544
+ M SK G L++ + P + W ++S +G L++ E + E ME
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVS-WNAMISGLSHNGQGDEALELFEEMLAEGME 521
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 193/382 (50%), Gaps = 27/382 (7%)
Query: 143 MRPSSFTFSI---LTSLVSSPCHAKQ---------VHGRIIRSGMDLSNVVLGNSLIAMY 190
M PS+F + ++L+ H Q VHG+IIR+G + + N L+ Y
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGAS-TCIQHANVLVNFY 59
Query: 191 GKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG---HHELALAHFYKMRDAELLPDQF 247
K G + + S+ + D++SWNSL+ + G + F +MR ++LP+ +
Sbjct: 60 AKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ 307
T + + S+L+ G+Q A K+ + V ++ + ++ K +ED +++F
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 308 DRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR--PTEYMVSCLLSSFSIFLPVEV 365
+T ++M+S YAT E+A+ +F L LRE ++Y+ + +LSS + + V +
Sbjct: 180 PERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
Query: 366 GIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAY 425
G QIH + K G L++ LV MY+K +++A +F+ + ++ ++W+ ++ G +
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 426 NGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEE 485
NG+ + LF + G+ P T+ VL AC+ +++EG ++ F +K G E
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLH-----SFLLKLGFE 354
Query: 486 HY----TYVVEMLSKAGMLKEA 503
+ T +V+M +KAG L +A
Sbjct: 355 RHLFATTALVDMYAKAGCLADA 376
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+++L C S ++ K VH H +K G +G+ +YS G + D VF +
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALEL 134
K+ SWN + GL +GQ A +LF+ M D V++ ++IS + GF
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 135 FVEMQGA-GMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMD 176
F M G+ P ++ + L+S K+ I + +D
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANID 589
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 278/512 (54%), Gaps = 5/512 (0%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF- 150
LK+ ++ +A ++FD M RDV+SWNS+I+GY SNG + L +FV+M +G+ T
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 151 SILTSLVSSP--CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
S+ S + VH +++ + N+L+ MY K G +D + +V M
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
++S+ S++ R G A+ F +M + + PD +T + +++ C+ R LD+GK+V
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
+ + ++ VS+A +D+++KC ++++ +F+E D ++I Y+ +
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 329 EDALHLFVLTLREN-IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
+AL LF L L E P E V+C+L + + + G +IH + + G+ SD +A++
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
LV MYAK G + A +F++ KDLVSW ++ G +G + LF ++ + G+ D
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 599
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
I+ ++L AC++ VDEG + F M E ++P EHY +V+ML++ G L +A +
Sbjct: 600 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 659
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
E MP +W +L C IH D+++ E VA+++ E EP+ Y+++A Y +WE
Sbjct: 660 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWE 719
Query: 568 SLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
+ R+RK + Q+ ++ GCSW +K V F
Sbjct: 720 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 751
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 203/382 (53%), Gaps = 9/382 (2%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
G L A ++FD + + + WN +++ A +G S ++ LF +M +G+ S+TFS ++
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 155 SLVSS--PCHA-KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
SS H +Q+HG I++SG N V GNSL+A Y K VD + V M + D+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
ISWNS++ G E L+ F +M + + D T ++ + C++ R + G+ V +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
K F + +D++SKC L+ + +F E TSMI+ YA L +A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK--LGFESDAVLASTLV 389
+ LF E I P Y V+ +L+ + + ++ G ++H + + LGF D +++ L+
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIFVSNALM 439
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG-MAPDR 448
MYAK G + +A +F+E ++KD++SWNTI+ G + N + L LF L+ E +PD
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 449 ITLAAVLLACNYGSFVDEGIKI 470
T+A VL AC S D+G +I
Sbjct: 500 RTVACVLPACASLSAFDKGREI 521
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 7/397 (1%)
Query: 110 RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC--HAKQVH 167
R V N+ + + +G +A++L + P + S+L S K+V
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLC-SVLQLCADSKSLKDGKEVD 117
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHH 227
IR + + LG+ L MY G + + V +K + WN LM ++G
Sbjct: 118 N-FIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 228 ELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAA 287
++ F KM + + D +T S + S+LR + G+Q+ F K GF + V ++
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 288 IDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTE 347
+ + K R++ + ++F E D S+I+ Y ++ L E L +FV L I
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 348 YMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE 407
+ + + + + +G +H++ K F + +TL+ MY+K G +D A +F E
Sbjct: 297 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 408 TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEG 467
+ +VS+ +++ G A G + LF+E+ EG++PD T+ AVL C +DEG
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 468 IKIF-FSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
++ + E + G + +++M +K G ++EA
Sbjct: 417 KRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEA 451
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 170/616 (27%), Positives = 307/616 (49%), Gaps = 38/616 (6%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+TLL C N V VHA +KLG +T +L
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFL-------------------------- 184
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
T N+ LK + +L AC LF+ +P +D V++N++I+GY +G ++++ LF++M
Sbjct: 185 ---TVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 139 QGAGMRPSSFTFS-ILTSLVSSPCHA--KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+ +G +PS FTFS +L ++V A +Q+H + +G + +GN ++ Y K
Sbjct: 242 RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDASVGNQILDFYSKHDR 300
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
V + + M ++D +S+N ++ + +A +E +L F +M+ F +T++S+
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSI--VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
+NL L G+Q+ C + +SI V ++ +D+++KC E++ +F + T
Sbjct: 361 AANLSSLQMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
T++IS Y L L LF N+R + + +L + + F + +G Q+HA +
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
+ G + S LV MYAK G I DA+ +F E ++ VSWN ++ A NG +
Sbjct: 479 IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAI 538
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
F ++I G+ PD +++ VL AC++ FV++G + F +M +G+ P ++HY ++++
Sbjct: 539 GAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDL 598
Query: 494 LSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREP-QAPFP 552
L + G EA +++ MP+ MW +L+ C IH + + E A+++ E +
Sbjct: 599 LGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA 658
Query: 553 YLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDX 612
Y+ ++ Y G WE + V+K M ++ K+ SW + + ++ F SN H G +
Sbjct: 659 YVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 718
Query: 613 XXXXXXXVWEMETEGY 628
E+E EGY
Sbjct: 719 VRKINELTAEIEREGY 734
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 239/508 (47%), Gaps = 16/508 (3%)
Query: 34 VKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLK 93
+ V A +K G +T T N ++ G ++ A KV+D++ HKN+ S N + G +K
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM--QGAGMRPSSFTFS 151
+G + +A LFD MP R VV+W ++ YA N +A +LF +M + P TF+
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 152 ILTSLVSS--PCHA-KQVHGRIIRSGMDLSN-VVLGNSLIAMYGKVGLVDYSFSVILTMK 207
L + P +A QVH ++ G D + + + N L+ Y +V +D + + +
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ D +++N+L+ + G + ++ F KMR + P FT S ++ L D G+Q
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ A GF ++ V + +D +SK +R+ ++ LF E D +ISSY+ D
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
E +LH F + + +LS + +++G Q+H +S + ++
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
LV MYAK + ++A IF + VSW ++ G G L LF ++ + D
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY----VVEMLSKAGMLKEA 503
+ T A VL A + + G ++ F ++ G + +V+M +K G +K+A
Sbjct: 452 QSTFATVLKASASFASLLLGKQLH-----AFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGD 531
+ + E MP + W ++S +GD
Sbjct: 507 VQVFEEMPDRNAVS-WNALISAHADNGD 533
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 306/599 (51%), Gaps = 66/599 (11%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N ++ Y + G +L+ FD + ++ SWN+ + G K+G+L A +LF+ MP +DVV
Sbjct: 97 NTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVV 156
Query: 114 SWNSMISGYASNGFSSDALELFVEMQ-GAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIR 172
+ NS++ GY NG++ +AL LF E+ A + L + C KQ+H +I+
Sbjct: 157 TLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKC-GKQIHAQILI 215
Query: 173 SGMDLSNVVLGNSLIAMYGKVGLV--------------DYSFSVILTM------------ 206
G++ + + +SL+ +Y K G + D+S S +++
Sbjct: 216 GGVECDSK-MNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRG 274
Query: 207 ---KKID--IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
+K + +I WNS++ AL F +MR+ E D T + +++ C L
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGF 333
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISS 321
L+ GKQ+ K G + + +V+S +D++SKC ++ +LF+E + +DT L SMI
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 322 YATHDLGEDALHLF------------------------VLTL-------RENIRPTEYMV 350
Y + +DA +F V TL + ++ E +
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 351 SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI 410
S ++S+ + +E+G Q+ A +G +SD V++S+L+ +Y K G ++ +F+
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 411 KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
D V WN+++ G A NG+ +DLFK++ G+ P +IT VL ACNY V+EG K+
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 471 FFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
F SM+ + G P +EH++ +V++L++AG ++EAI++VE MP+ + MW IL CV +G
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Query: 531 DLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
+ + A++I+E EP+ Y+ L+ + G WES VRK M + + G SW
Sbjct: 634 YKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 212/444 (47%), Gaps = 36/444 (8%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+T+L C +++ K +HA L G+ + + + +++Y+ G + A + + I
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+ S + + G G++ + LFD R V+ WNSMISGY +N +AL LF EM
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 139 QGAGMRPSSFTFSILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG-- 194
+ S +++ + + KQ+H + G+ + ++V+ ++L+ MY K G
Sbjct: 311 RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGL-IDDIVVASTLLDMYSKCGSP 369
Query: 195 ----------------LVDYSFSVILTMKKID-------------IISWNSLMWACHRAG 225
L++ V + +ID +ISWNS+ + G
Sbjct: 370 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 429
Query: 226 HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
L +F++M +L D+ + S+++S C+++ L+ G+QVFA VG + +VSS
Sbjct: 430 CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSS 489
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP 345
+ IDL+ KC +E R+F + D SMIS YAT+ G +A+ LF IRP
Sbjct: 490 SLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRP 549
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQI-HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
T+ +L++ + VE G ++ ++ GF D S +V + A+ G +++A+++
Sbjct: 550 TQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINL 609
Query: 405 FNETKIK-DLVSWNTIMMGLAYNG 427
E D W++I+ G NG
Sbjct: 610 VEEMPFDVDGSMWSSILRGCVANG 633
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 190/471 (40%), Gaps = 129/471 (27%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMY---GKVGLV------------------------ 196
+Q +G +++ G S V++ N L+ MY GK+G+
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 197 ------------------DYSFSVILT-----------------MKKIDIISWNSLMWAC 221
YS++V+++ M + D+++ NSL+
Sbjct: 106 SGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGY 165
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
G+ E AL F ++ D T +T++ C+ L L GKQ+ A G +S
Sbjct: 166 ILNGYAEEALRLF---KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDS 222
Query: 282 IVSSAAIDLFSK-------------------------------CNRLEDSVRLFTEQDRW 310
++S+ +++++K C R+ +S LF +
Sbjct: 223 KMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNR 282
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
L SMIS Y +++ +AL LF +R R ++ ++++ +E G Q+H
Sbjct: 283 CVILWNSMISGYIANNMKMEALVLFN-EMRNETREDSRTLAAVINACIGLGFLETGKQMH 341
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGI-------------------------------ID 399
K G D V+ASTL+ MY+K G ID
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 400 DALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACN 459
DA +F + K L+SWN++ G + NG TL+ F ++ + + D ++L++V+ AC
Sbjct: 402 DAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACA 461
Query: 460 YGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
S ++ G ++ F+ T G+ + + ++++ K G ++ + +TM
Sbjct: 462 SISSLELGEQV-FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM 511
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 186/616 (30%), Positives = 288/616 (46%), Gaps = 39/616 (6%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
LL C +++ + +H + L+LGL + + N + +YS G + + KVF+ + +N
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPV----RDVVSWNSMISGYASNGFSSDALELFV 136
+SWN L K G + +A L D M + D+V+WNS++SGYAS G S DA+ +
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 137 EMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
MQ AG++PS+ + S L V+ P H K +HG I+R+ + +V + +LI MY K
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL-WYDVYVETTLIDMYIKT 273
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLM 253
G + Y+ V M +I++WNSL+ A + A A +M + PD T ++L
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
S + L +K V + G N +VS AI FS C++ + R
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPN-VVSWTAI--FSGCSK-NGNFR----------- 378
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+AL +F+ E + P +S LL + G ++H
Sbjct: 379 ----------------NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
+ DA +A+ LV MY K G + A+ IF K K L SWN ++MG A G+ +
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
F ++ GM PD IT +VL C V EG K F M + +G+ P EH + +V++
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 494 LSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPY 553
L ++G L EA D ++TM +W LS C IH DL++ E K + EP Y
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 554 LVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXX 613
+++ Y + RWE + R+R M + SW + V+ F + H D
Sbjct: 603 MMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 614 XXXXXXVWEMETEGYV 629
V EM+ GYV
Sbjct: 663 FELYKLVSEMKKSGYV 678
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 193/455 (42%), Gaps = 85/455 (18%)
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
LG A +LFD MP RD ++WN ++ +G A+ELF EMQ +G + T L +
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 157 VSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK------ 207
S+ +Q+HG ++R G++ SNV + NSLI MY + G ++ S V +MK
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLE-SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 208 -----------------------------KIDIISWNSLMWACHRAGHHELALAHFYKMR 238
K DI++WNSL+ G + A+A +M+
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
A L P + S+L+ + L GK + + + Y+ V + ID++ K L
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 299 DSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
+ +F D + S++S + L +DA L + +E I+P
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP------------- 324
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLV 414
DA+ ++L YA G + AL + + K K ++V
Sbjct: 325 ----------------------DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 415 SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF-FS 473
SW I G + NG L +F ++ EG+ P+ T++ +L S + G ++ F
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 474 METEFGVKPGEEHY--TYVVEMLSKAGMLKEAIDI 506
+ + Y T +V+M K+G L+ AI+I
Sbjct: 423 LRKNLIC----DAYVATALVDMYGKSGDLQSAIEI 453
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 180/382 (47%), Gaps = 40/382 (10%)
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG 225
+HG +I+ G+D S+ + ++ + YG+ + ++ + M K D ++WN ++ R+G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 226 HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
+ E A+ F +M+ + T L+ VCSN +G+Q+ + ++G N + +
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 286 AAIDLFSKCNRLEDSVRLFTE-QDR----WDTALCT------------------------ 316
+ I ++S+ +LE S ++F +DR W++ L +
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 317 ------SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
S++S YA+ L +DA+ + ++P+ +S LL + + +++G IH
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVS 430
+ + D + +TL+ MY K G + A +F+ K++V+WN+++ GL+Y +
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 431 VTLDLFKELIREGMAPDRITLAAVLLACNYGSF--VDEGIKIFFSMETEFGVKPGEEHYT 488
L + +EG+ PD IT + LA Y + ++ + + M+ E GV P +T
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNS--LASGYATLGKPEKALDVIGKMK-EKGVAPNVVSWT 365
Query: 489 YVVEMLSKAGMLKEAIDIVETM 510
+ SK G + A+ + M
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKM 387
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 204/504 (40%), Gaps = 103/504 (20%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
Q G S S S+LL + K +H + L+ L Y+ +D+Y G++
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGY 122
A VFD + KN +WN + GL + L +A L M D ++WNS+ SGY
Sbjct: 277 PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 123 AS-----------------------------------NGFSSDALELFVEMQGAGMRPSS 147
A+ NG +AL++F++MQ G+ P++
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396
Query: 148 FTFSILTSLVS--SPCHA-KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
T S L ++ S H+ K+VHG +R + + + + +L+ MYGK G + + +
Sbjct: 397 ATMSTLLKILGCLSLLHSGKEVHGFCLRKNL-ICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
+K + SWN ++ G E +A F M +A + PD T ++++SVC N + +
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 265 GKQVFAFCF-KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
G + F + G + S +DL + L+++ WD
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA---------WD------------ 554
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG----IQIHALVPKLGFE 379
F+ T+ +++P + LSS I +E+ ++ L P
Sbjct: 555 -----------FIQTM--SLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPH---- 597
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIF-----NETKIKDLVSWNTI--------MMGLAYN 426
++ ++++Y+ +D I N +++DL SW I G +
Sbjct: 598 -NSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHP 656
Query: 427 GKVSVTLDLFK---ELIREGMAPD 447
+ + +L+K E+ + G PD
Sbjct: 657 DEGDIYFELYKLVSEMKKSGYVPD 680
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 292/586 (49%), Gaps = 45/586 (7%)
Query: 11 PYTSLSYCSTLLDHCLSQKSVNFVKIV--HAHFLKLGLNTYTYLGNRCLDLYSDLGHIND 68
P T Y S LL C K +F+ + HAH +K GL T +GN L LY LG
Sbjct: 58 PATPKLYAS-LLQTC--NKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLG---- 110
Query: 69 ALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFS 128
G+ ++ ++ FDG V+D +SW SM+SGY +
Sbjct: 111 --------------------PGMRETRRV------FDGRFVKDAISWTSMMSGYVTGKEH 144
Query: 129 SDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNS 185
ALE+FVEM G+ + FT S S + HG +I G + N + ++
Sbjct: 145 VKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEW-NHFISST 203
Query: 186 LIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAELLP 244
L +YG + V M + D+I W +++ A + +E AL FY M R L+P
Sbjct: 204 LAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP 263
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
D T T+++ C NLR L +GK++ G N +V S+ +D++ KC + ++ ++F
Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVF 323
Query: 305 TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
+ ++ ++++ Y + E A+ +F RE Y +L + + V
Sbjct: 324 NGMSKKNSVSWSALLGGYCQNGEHEKAIEIF----REMEEKDLYCFGTVLKACAGLAAVR 379
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA 424
+G +IH + G + ++ S L+ +Y K G ID A ++++ I+++++WN ++ LA
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALA 439
Query: 425 YNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGE 484
NG+ + F +++++G+ PD I+ A+L AC + VDEG F M +G+KPG
Sbjct: 440 QNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGT 499
Query: 485 EHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDL-QVIETVAKEIM 543
EHY+ ++++L +AG+ +EA +++E +W ++L C + D +V E +AK +M
Sbjct: 500 EHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMM 559
Query: 544 EREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
E EP+ Y++L+ Y+ +GR + +RK M ++ + +G SW
Sbjct: 560 ELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSW 605
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
+A+ + T I T + + LL + + GIQ HA V K G E+D + ++L+
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 390 HMYAKFGI-IDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+Y K G + + +F+ +KD +SW ++M G + L++F E++ G+ +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 449 ITLAAVLLACN 459
TL++ + AC+
Sbjct: 164 FTLSSAVKACS 174
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 175/597 (29%), Positives = 291/597 (48%), Gaps = 45/597 (7%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
ST+L C + K +HAH L+ GL L N +D Y
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY------------------ 294
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+K G++ A +LF+GMP ++++SW +++SGY N +A+ELF M
Sbjct: 295 -------------VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 139 QGAGMRPSSFT-FSILTSLVSSPCHA----KQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
G++P + SILTS S HA QVH I++ + ++ + NSLI MY K
Sbjct: 342 SKFGLKPDMYACSSILTSCAS--LHALGFGTQVHAYTIKANLG-NDSYVTNSLIDMYAKC 398
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAGH----HELALAHFYKMRDAELLPDQFTC 249
+ + V D++ +N+++ R G HE AL F MR + P T
Sbjct: 399 DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE-ALNIFRDMRFRLIRPSLLTF 457
Query: 250 STLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR 309
+L+ ++L L KQ+ FK G + SA ID++S C L+DS +F E
Sbjct: 458 VSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV 517
Query: 310 WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
D + SM + Y E+AL+LF+ RP E+ + ++++ V++G +
Sbjct: 518 KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
H + K G E + + + L+ MYAK G +DA F+ +D+V WN+++ A +G+
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
L + ++++ EG+ P+ IT VL AC++ V++G+K F M FG++P EHY
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVC 696
Query: 490 VVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQA 549
+V +L +AG L +A +++E MP +WR +LS C G++++ E A+ + +P+
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 550 PFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ +L+ Y G W +VR+ M+ + + G SW G+ V+ F S H
Sbjct: 757 SGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 237/524 (45%), Gaps = 56/524 (10%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+ + +K G + Y+G +D Y G+I+ A VFD + K++ +W
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW------------ 217
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+MISG G S +L+LF ++ + P + S + S
Sbjct: 218 -------------------TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 157 VSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
S KQ+H I+R G+++ + L N LI Y K G V + + M +IIS
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEM-DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
W +L+ + H+ A+ F M L PD + CS++++ C++L L G QV A+
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG----- 328
K +S V+++ ID+++KC+ L D+ ++F D L +MI Y+ LG
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR--LGTQWEL 435
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
+AL++F IRP+ LL + + + + QIH L+ K G D S L
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSAL 495
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+ +Y+ + D+ +F+E K+KDLV WN++ G + L+LF EL PD
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDE 555
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAI 504
T A ++ A + V G + + +K G E Y+ ++M +K G ++A
Sbjct: 556 FTFANMVTAAGNLASVQLGQEFHCQL-----LKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGD----LQVIETVAKEIME 544
++ + + W ++S HG+ LQ++E + E +E
Sbjct: 611 KAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 216/451 (47%), Gaps = 47/451 (10%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+ LL S +++ +VH + GL TYL N ++LYS G + A KVF+
Sbjct: 48 ARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK--- 104
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
MP R++VSW++M+S +G ++L +F+E
Sbjct: 105 ----------------------------MPERNLVSWSTMVSACNHHGIYEESLVVFLEF 136
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGR---------IIRSGMDLSNVVLGNSLIAM 189
R S IL+S + + C GR +++SG D +V +G LI
Sbjct: 137 WRT--RKDSPNEYILSSFIQA-CSGLDGRGRWMVFQLQSFLVKSGFD-RDVYVGTLLIDF 192
Query: 190 YGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTC 249
Y K G +DY+ V + + ++W +++ C + G ++L FY++ + ++PD +
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 250 STLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR 309
ST++S CS L L+ GKQ+ A + G ++ + + ID + KC R+ + +LF
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 310 WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
+ T+++S Y + L ++A+ LF + ++P Y S +L+S + + G Q+
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNG-- 427
HA K +D+ + ++L+ MYAK + DA +F+ D+V +N ++ G + G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 428 -KVSVTLDLFKELIREGMAPDRITLAAVLLA 457
++ L++F+++ + P +T ++L A
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 198/422 (46%), Gaps = 39/422 (9%)
Query: 18 CSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
CS++L C S ++ F VHA+ +K L +Y+ N +D+Y+ + DA KVFD +
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFS---SDALEL 134
DVV +N+MI GY+ G +AL +
Sbjct: 413 -------------------------------AADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 135 FVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYG 191
F +M+ +RPS TF L ++ ++S +KQ+HG + + G++L ++ G++LI +Y
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL-DIFAGSALIDVYS 500
Query: 192 KVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
+ S V MK D++ WNS+ + +E AL F +++ + PD+FT +
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFAN 560
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
+++ NL + G++ K G N +++A +D+++KC ED+ + F D
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRD 620
Query: 312 TALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA 371
S+ISSYA H G+ AL + + E I P +LS+ S VE G++
Sbjct: 621 VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFE 680
Query: 372 LVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD-LVSWNTIMMGLAYNGKVS 430
L+ + G E + +V + + G ++ A + + K + W +++ G A G V
Sbjct: 681 LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Query: 431 VT 432
+
Sbjct: 741 LA 742
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 155/298 (52%), Gaps = 8/298 (2%)
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG 225
VHG+II G++L + L N LI +Y + G + Y+ V M + +++SW++++ AC+ G
Sbjct: 66 VHGQIIVWGLEL-DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 226 HHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGK----QVFAFCFKVGFVYN 280
+E +L F + R + P+++ S+ + CS L +G+ Q+ +F K GF +
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRD 182
Query: 281 SIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLR 340
V + ID + K ++ + +F T T+MIS +L LF +
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
+N+ P Y++S +LS+ SI +E G QIHA + + G E DA L + L+ Y K G +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 401 ALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
A +FN K+++SW T++ G N ++LF + + G+ PD +++L +C
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 122/252 (48%), Gaps = 5/252 (1%)
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
G ++ +S+ I+L+S+ + + ++F + + ++M+S+ H + E++L +F
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 336 VLTLR-ENIRPTEYMVSCLLSSFSIF--LPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
+ R P EY++S + + S + Q+ + + K GF+ D + + L+ Y
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 393 AKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLA 452
K G ID A +F+ K V+W T++ G G+ V+L LF +L+ + + PD L+
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 453 AVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPY 512
VL AC+ F++ G +I + +G++ +++ K G + A + MP
Sbjct: 254 TVLSACSILPFLEGGKQIHAHI-LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 513 TITLDMWRLILS 524
+ W +LS
Sbjct: 313 KNIIS-WTTLLS 323
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 190/659 (28%), Positives = 306/659 (46%), Gaps = 89/659 (13%)
Query: 25 CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW 84
C SV + HA L G + ++GN + +YS ++DA KVFD++S
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS------- 189
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA-GM 143
V DVVSWNS+I YA G ALE+F M G
Sbjct: 190 ------------------------VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 144 RPSSFTF-SILTSLVSSPCHA--KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSF 200
RP + T ++L S H+ KQ+H + S M + N+ +GN L+ MY K G++D +
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 201 SVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL----------------- 243
+V M D++SWN+++ + G E A+ F KM++ ++
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 244 ------------------PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV-------GFV 278
P++ T +++S C+++ L GK++ + K G
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLF---TEQDRWDTALCTSMISSYATHDLGEDALHLF 335
++V + ID+++KC +++ + +F + ++R D T MI Y+ H AL L
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKER-DVVTWTVMIGGYSQHGDANKALELL 463
Query: 336 VLTLREN--IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV---LASTLVH 390
E+ RP + +SC L + + + +G QIHA L + +AV +++ L+
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYA--LRNQQNAVPLFVSNCLID 521
Query: 391 MYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT 450
MYAK G I DA +F+ K+ V+W ++M G +G L +F E+ R G D +T
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 451 LAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
L VL AC++ +D+G++ F M+T FGV PG EHY +V++L +AG L A+ ++E M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 511 PYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLV 570
P +W LS C IHG +++ E A++I E Y +L+ Y GRW+ +
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVT 701
Query: 571 RVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
R+R M K K+ GCSW TF H K+ + ++ GYV
Sbjct: 702 RIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV 760
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 237/519 (45%), Gaps = 73/519 (14%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+L C S + + K +H + + ++GN +D+Y+ G +++A VF ++S K
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELF 135
+ SWN + G + G+ +A +LF+ M DVV+W++ ISGYA G +AL +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 136 VEMQGAGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIRSGMDL-------SNVVLGNS 185
+M +G++P+ T S+L+ V + H K++H I+ +DL N+V+ N
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQ 412
Query: 186 LIAMYGKVGLVDYSFSVI--LTMKKIDIISWNSLMWACHRAGHHELALAHFYKM--RDAE 241
LI MY K VD + ++ L+ K+ D+++W ++ + G AL +M D +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI---VSSAAIDLFSKCNRLE 298
P+ FT S + C++L L GKQ+ A+ + N++ VS+ ID+++KC +
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQ--QNAVPLFVSNCLIDMYAKCGSIS 530
Query: 299 DSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
D+ +F + TS+++ Y H GE+AL +F + +R
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF-----DEMR-------------- 571
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS--- 415
++GF+ D V +++ + G+ID + FN K VS
Sbjct: 572 ----------------RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGP 615
Query: 416 --WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFS 473
+ ++ L G+++ L L +E+ M P + A L C V+ G ++
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEM---PMEPPPVVWVAFLSCCRIHGKVELG---EYA 669
Query: 474 ME--TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
E TE + YT + + + AG K+ I M
Sbjct: 670 AEKITELASN-HDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 185/416 (44%), Gaps = 53/416 (12%)
Query: 95 GQLGNACQLFDGMPVRD--VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
G L +A L P D V WNS+I Y NG ++ L LF M P ++TF
Sbjct: 73 GCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPF 132
Query: 153 L---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
+ +SS + H + +G +SNV +GN+L+AMY + + + V M
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDA-ELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D++SWNS++ + + G ++AL F +M + PD T ++ C++L GKQ+
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKC-------------------------------NRL 297
F + N V + +D+++KC R
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRF 311
Query: 298 EDSVRLF----TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCL 353
ED+VRLF E+ + D ++ IS YA LG +AL + L I+P E + +
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 354 LSSFSIFLPVEVGIQIHALVPKL-------GFESDAVLASTLVHMYAKFGIIDDALHIFN 406
LS + + G +IH K G + ++ + L+ MYAK +D A +F+
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 407 --ETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG--MAPDRITLAAVLLAC 458
K +D+V+W ++ G + +G + L+L E+ E P+ T++ L+AC
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 6/346 (1%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID--IISWNSLMWAC 221
K +H +++ G+ N L + LI+ Y VG + ++ S++ D + WNSL+ +
Sbjct: 45 KLIHQKLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY 102
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
G L F M PD +T + C + + G+ A GF+ N
Sbjct: 103 GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNV 162
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
V +A + ++S+C L D+ ++F E WD S+I SYA + AL +F E
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 342 -NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
RP + +L + +G Q+H + + + LV MYAK G++D+
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 401 ALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY 460
A +F+ +KD+VSWN ++ G + G+ + LF+++ E + D +T +A +
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 461 GSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
E + + M + G+KP E V+ + G L +I
Sbjct: 343 RGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEI 387
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
S+I SY + L+LF L + P Y + + V G HAL
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
GF S+ + + LV MY++ + DA +F+E + D+VSWN+I+ A GK V L++
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 436 FKELIRE-GMAPDRITLAAVLLACNYGSFVDEGIKIF-FSMETEF--GVKPGEEHYTYVV 491
F + E G PD ITL VL C G ++ F++ +E + G +V
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG----NCLV 271
Query: 492 EMLSKAGMLKEAIDIVETM 510
+M +K GM+ EA + M
Sbjct: 272 DMYAKCGMMDEANTVFSNM 290
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 279/565 (49%), Gaps = 40/565 (7%)
Query: 104 FDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTS--LVSSP 160
F + V++W S+I + S AL FVEM+ +G P F S+L S ++
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 161 CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV-GL------------------------ 195
+ VHG I+R GMD ++ GN+L+ MY K+ G+
Sbjct: 122 RFGESVHGFIVRLGMDC-DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 196 -----------VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP 244
+D V M + D++S+N+++ ++G +E AL +M +L P
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
D FT S+++ + S D+ KGK++ + + G + + S+ +D+++K R+EDS R+F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 305 TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
+ D S+++ Y + +AL LF + ++P S ++ + + +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA 424
+G Q+H V + GF S+ +AS LV MY+K G I A IF+ + D VSW I+MG A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 425 YNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGE 484
+G + LF+E+ R+G+ P+++ AVL AC++ VDE F SM +G+
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 485 EHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIME 544
EHY V ++L +AG L+EA + + M T +W +LS C +H +L++ E VA++I
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 545 REPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQL 604
+ + Y+++ Y GRW+ + ++R M +K ++ CSW MKN + F S
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 605 QHYGGKDXXXXXXXXVWEMETEGYV 629
H + +ME EGYV
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYV 625
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 233/451 (51%), Gaps = 17/451 (3%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDAL---KVFDDI 76
++L C + F + VH ++LG++ Y GN +++Y+ L + + VFD++
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169
Query: 77 SHKNSTSWNICLKG---LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALE 133
+ S S + +K ++ G + + ++F+ MP +DVVS+N++I+GYA +G DAL
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALR 228
Query: 134 LFVEMQGAGMRPSSFTFSILTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMY 190
+ EM ++P SFT S + + S K++HG +IR G+D S+V +G+SL+ MY
Sbjct: 229 MVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-SDVYIGSSLVDMY 287
Query: 191 GKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCS 250
K ++ S V + D ISWNSL+ + G + AL F +M A++ P S
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 251 TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
+++ C++L L GKQ+ + + GF N ++SA +D++SKC ++ + ++F +
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS-IFLPVEVGIQI 369
D T++I +A H G +A+ LF R+ ++P + +L++ S + L E
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNGK 428
+++ G + + + + + G +++A + ++ ++ S W+T++ +
Sbjct: 468 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS---- 523
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACN 459
V L+L +++ + D + A +L CN
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 200/431 (46%), Gaps = 43/431 (9%)
Query: 157 VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNS 216
+ S AKQ+H + IR+ LS+ + +I++Y + L+ + + T+K +++W S
Sbjct: 18 IKSKSQAKQLHAQFIRT-QSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
++ ALA F +MR + PD +++ C+ + DL G+ V F ++G
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 277 FVYNSIVSSAAIDLFSK---------------------CNRLEDSV-------------- 301
+ +A +++++K N ++ V
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 302 -RLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIF 360
R+F R D ++I+ YA + EDAL + +++P + +S +L FS +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 361 LPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIM 420
+ V G +IH V + G +SD + S+LV MYAK I+D+ +F+ +D +SWN+++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF-FSMETEFG 479
G NG+ + L LF++++ + P + ++V+ AC + + + G ++ + + FG
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 480 VKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVA 539
+ +V+M SK G +K A I + M + W I+ +HG ++
Sbjct: 376 SNIFIA--SALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALHGHGHEAVSLF 432
Query: 540 KEIMEREPQAP 550
+E M+R+ P
Sbjct: 433 EE-MKRQGVKP 442
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 271/526 (51%), Gaps = 5/526 (0%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N L+ +G+ A +F MP +D++SWNS+++ + ++G S DAL L M +G
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 145 PSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
+ TF+ + +P + +HG ++ SG+ N ++GN+L++MYGK+G + S
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL-FYNQIIGNALVSMYGKIGEMSESRR 401
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
V+L M + D+++WN+L+ + ALA F MR + + T +++S C D
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 262 L-DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS 320
L ++GK + A+ GF + V ++ I +++KC L S LF D + +M++
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 521
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES 380
+ A H GE+ L L + ++ S LS+ + +E G Q+H L KLGFE
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELI 440
D+ + + MY+K G I + + + + + L SWN ++ L +G F E++
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 441 REGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGML 500
G+ P +T ++L AC++G VD+G+ + + +FG++P EH V+++L ++G L
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 501 KEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAY 560
EA + MP +WR +L+ C IHG+L A+ + + EP+ Y++ + +
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 761
Query: 561 QMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
GRWE + VRK M K K+ CSW +K+ V +F H
Sbjct: 762 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTH 807
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 201/412 (48%), Gaps = 12/412 (2%)
Query: 107 MPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAK-- 164
MPVR+ VSWN+M+SG G + +E F +M G++PSSF ++ SLV++ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF---VIASLVTACGRSGSM 57
Query: 165 -----QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMW 219
QVHG + +SG+ LS+V + +++ +YG GLV S V M +++SW SLM
Sbjct: 58 FREGVQVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 220 ACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY 279
G E + + MR + ++ + S ++S C L+D G+Q+ K G
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTL 339
V ++ I + ++ + +F + DT S+ ++YA + E++ +F L
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
R + VS LLS + G IH LV K+GF+S + +TL+ MYA G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 400 DALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACN 459
+A +F + KDL+SWN++M +G+ L L +I G + + +T + L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 460 YGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
F ++G +I + G+ + +V M K G + E+ ++ MP
Sbjct: 357 TPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 221/465 (47%), Gaps = 26/465 (5%)
Query: 95 GQLGN---ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
G +GN A +FD M RD +SWNS+ + YA NG ++ +F M+ +S T S
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248
Query: 152 ILTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
L S++ H K +HG +++ G D S V + N+L+ MY G + V M
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFD-SVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 307
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D+ISWNSLM + G AL M + + T ++ ++ C +KG+ +
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
G YN I+ +A + ++ K + +S R+ + R D ++I YA +
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 427
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP---VEVGIQIHALVPKLGFESDAVLA 385
+ AL F E + V +LS + LP +E G +HA + GFESD +
Sbjct: 428 DKALAAFQTMRVEGVSSNYITVVSVLS--ACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 386 STLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
++L+ MYAK G + + +FN +++++WN ++ A++G L L ++ G++
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV----VEMLSKAGMLK 501
D+ + + L A + ++EG ++ VK G EH +++ +M SK G +
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLH-----GLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 502 EAIDIVETMPYTI--TLDMWRLILSVCVIHGDLQVIETVAKEIME 544
E +V+ +P ++ +L W +++S HG + + E++E
Sbjct: 601 E---VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 642
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 216/449 (48%), Gaps = 18/449 (4%)
Query: 102 QLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS---LVS 158
++F+ MP R+VVSW S++ GY+ G + ++++ M+G G+ + + S++ S L+
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 159 SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
+Q+ G++++SG++ S + + NSLI+M G +G VDY+ + M + D ISWNS+
Sbjct: 158 DESLGRQIIGQVVKSGLE-SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 216
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV 278
A + GH E + F MR + T STL+SV ++ G+ + K+GF
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 276
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLT 338
V + + +++ R ++ +F + D S+++S+ DAL L
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 336
Query: 339 LREN-----IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYA 393
+ + T + +C F E G +H LV G + ++ + LV MY
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDF-----FEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 394 KFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
K G + ++ + + +D+V+WN ++ G A + L F+ + EG++ + IT+ +
Sbjct: 392 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 451
Query: 454 VLLACNY-GSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPY 512
VL AC G ++ G K + G + E ++ M +K G L + D+ +
Sbjct: 452 VLSACLLPGDLLERG-KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD- 509
Query: 513 TITLDMWRLILSVCVIHG-DLQVIETVAK 540
+ W +L+ HG +V++ V+K
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 185/418 (44%), Gaps = 40/418 (9%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
++ L C + +I+H + GL +GN + +Y +G ++++ +V
Sbjct: 349 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV------ 402
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
LL+ MP RDVV+WN++I GYA + AL F M
Sbjct: 403 ------------LLQ-------------MPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 437
Query: 139 QGAGMRPSSFTFSILTSLVSSPC----HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ G+ + T + S P K +H I+ +G + S+ + NSLI MY K G
Sbjct: 438 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE-SDEHVKNSLITMYAKCG 496
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
+ S + + +II+WN+++ A GH E L KMR + DQF+ S +S
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
+ L L++G+Q+ K+GF ++S + +AA D++SKC + + V++
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 616
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+IS+ H E+ F L I+P LL++ S V+ G+ + ++
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 676
Query: 375 K-LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK--DLVSWNTIMMGLAYNGKV 429
+ G E ++ + + G + +A ++ +K DLV W +++ +G +
Sbjct: 677 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCKIHGNL 733
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 284/578 (49%), Gaps = 9/578 (1%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S +L C + +V+ K L L N +D+Y G + +A F +I
Sbjct: 111 SAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR 170
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+STSWN + G K+G + A LF MP +VVSWN +ISG+ G S ALE V M
Sbjct: 171 PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRM 229
Query: 139 QGAGMRPSSFTFSI---LTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
Q G+ F S KQ+H +++SG++ S + ++LI MY G
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI-SALIDMYSNCGS 288
Query: 196 VDYSFSVILTMK---KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
+ Y+ V K + WNS++ +E AL ++ ++L D +T S
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDT 312
+ +C N +L G QV + G+ + IV S +DL + ++D+ +LF D
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 313 ALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHAL 372
+ +I A +LF ++ + +++VS +L S + G QIH L
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 373 VPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVT 432
K G+ES+ V A+ LV MY K G ID+ + +F+ +D+VSW I++G NG+V
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 433 LDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVE 492
F ++I G+ P+++T +L AC + ++E +M++E+G++P EHY VV+
Sbjct: 529 FRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVD 588
Query: 493 MLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFP 552
+L +AG+ +EA +++ MP +W +L+ C H + ++ +A+++++ P P
Sbjct: 589 LLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSV 648
Query: 553 YLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWF 590
Y L+ AY +G W+ L +VR+ ++ KE G SW
Sbjct: 649 YTSLSNAYATLGMWDQLSKVREAAKKLGAKES-GMSWI 685
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 236/526 (44%), Gaps = 70/526 (13%)
Query: 22 LDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNS 81
L HC ++ + + AH +K G++ ++ N + +Y D ++DA KVFD++S
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE--- 68
Query: 82 TSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA 141
R++V+W +M+SGY S+G + A+EL+ M +
Sbjct: 69 ----------------------------RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDS 100
Query: 142 GMRPSS-FTFSILTS----------------------------LVSSPCHAKQVHGRIIR 172
++ F +S + L++S +GR+I
Sbjct: 101 EEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIE 160
Query: 173 SGMDLSNVVLG-----NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHH 227
+ ++ N+LI+ Y K GL+D + ++ M + +++SWN L+ G
Sbjct: 161 ANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP 220
Query: 228 ELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAA 287
AL +M+ L+ D F + CS L GKQ+ K G + SA
Sbjct: 221 R-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISAL 279
Query: 288 IDLFSKCNRLEDSVRLFTEQD---RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
ID++S C L + +F ++ A+ SM+S + ++ E AL L + + ++
Sbjct: 280 IDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC 339
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
Y +S L ++ + +G+Q+H+LV G+E D ++ S LV ++A G I DA +
Sbjct: 340 FDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKL 399
Query: 405 FNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFV 464
F+ KD+++++ ++ G +G S+ LF+ELI+ G+ D+ ++ +L C+ + +
Sbjct: 400 FHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASL 459
Query: 465 DEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
G +I + + G + T +V+M K G + + + + M
Sbjct: 460 GWGKQI-HGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM 504
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 128/307 (41%), Gaps = 34/307 (11%)
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C ++ +G+ + A K G N +++ I ++ L D+ ++F E +
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 316 TSMISSYATHDLGEDALHLFVLTL-RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
T+M+S Y + A+ L+ L E E+M S +L + + +++GI ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
K D VL +++V MY K G + +A F E SWNT++ G G + +
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 435 LFKELI------------------------------REGMAPDRITLAAVLLACNYGSFV 464
LF + REG+ D L L AC++G +
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 465 DEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV--ETMPYTITLDMWRLI 522
G ++ + + G++ + +++M S G L A D+ E + ++ +W +
Sbjct: 255 TMGKQLHCCV-VKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 523 LSVCVIH 529
LS +I+
Sbjct: 314 LSGFLIN 320
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 271/526 (51%), Gaps = 5/526 (0%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N L+ +G+ A +F MP +D++SWNS+++ + ++G S DAL L M +G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 145 PSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
+ TF+ + +P + +HG ++ SG+ N ++GN+L++MYGK+G + S
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL-FYNQIIGNALVSMYGKIGEMSESRR 418
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
V+L M + D+++WN+L+ + ALA F MR + + T +++S C D
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 262 L-DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS 320
L ++GK + A+ GF + V ++ I +++KC L S LF D + +M++
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 538
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES 380
+ A H GE+ L L + ++ S LS+ + +E G Q+H L KLGFE
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELI 440
D+ + + MY+K G I + + + + + L SWN ++ L +G F E++
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 441 REGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGML 500
G+ P +T ++L AC++G VD+G+ + + +FG++P EH V+++L ++G L
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 501 KEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAY 560
EA + MP +WR +L+ C IHG+L A+ + + EP+ Y++ + +
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 778
Query: 561 QMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
GRWE + VRK M K K+ CSW +K+ V +F H
Sbjct: 779 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTH 824
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 209/426 (49%), Gaps = 12/426 (2%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G++ A LFD MPVR+ VSWN+M+SG G + +E F +M G++PSSF +
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF---V 60
Query: 153 LTSLVSSPCHAK-------QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
+ SLV++ + QVHG + +SG+ LS+V + +++ +YG GLV S V
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
M +++SW SLM G E + + MR + ++ + S ++S C L+D G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
+Q+ K G V ++ I + ++ + +F + DT S+ ++YA +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 326 DLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLA 385
E++ +F L R + VS LLS + G IH LV K+GF+S +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 386 STLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
+TL+ MYA G +A +F + KDL+SWN++M +G+ L L +I G +
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID 505
+ +T + L AC F ++G +I + G+ + +V M K G + E+
Sbjct: 360 VNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 506 IVETMP 511
++ MP
Sbjct: 419 VLLQMP 424
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 221/465 (47%), Gaps = 26/465 (5%)
Query: 95 GQLGN---ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
G +GN A +FD M RD +SWNS+ + YA NG ++ +F M+ +S T S
Sbjct: 206 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 265
Query: 152 ILTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
L S++ H K +HG +++ G D S V + N+L+ MY G + V M
Sbjct: 266 TLLSVLGHVDHQKWGRGIHGLVVKMGFD-SVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D+ISWNSLM + G AL M + + T ++ ++ C +KG+ +
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
G YN I+ +A + ++ K + +S R+ + R D ++I YA +
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 444
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP---VEVGIQIHALVPKLGFESDAVLA 385
+ AL F E + V +LS + LP +E G +HA + GFESD +
Sbjct: 445 DKALAAFQTMRVEGVSSNYITVVSVLS--ACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 386 STLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
++L+ MYAK G + + +FN +++++WN ++ A++G L L ++ G++
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV----VEMLSKAGMLK 501
D+ + + L A + ++EG ++ VK G EH +++ +M SK G +
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLH-----GLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 502 EAIDIVETMPYTI--TLDMWRLILSVCVIHGDLQVIETVAKEIME 544
E +V+ +P ++ +L W +++S HG + + E++E
Sbjct: 618 E---VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 659
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 229/514 (44%), Gaps = 49/514 (9%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
VH K GL + Y+ L LY G ++ + KVF+++ +N SW
Sbjct: 81 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSW------------ 128
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS- 155
S++ GY+ G + ++++ M+G G+ + + S++ S
Sbjct: 129 -------------------TSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 156 --LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
L+ +Q+ G++++SG++ S + + NSLI+M G +G VDY+ + M + D IS
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLE-SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 228
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
WNS+ A + GH E + F MR + T STL+SV ++ G+ +
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
K+GF V + + +++ R ++ +F + D S+++S+ DAL
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 334 LFVLTLREN-----IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
L + + T + +C F E G +H LV G + ++ + L
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDF-----FEKGRILHGLVVVSGLFYNQIIGNAL 403
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
V MY K G + ++ + + +D+V+WN ++ G A + L F+ + EG++ +
Sbjct: 404 VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNY 463
Query: 449 ITLAAVLLACNY-GSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
IT+ +VL AC G ++ G K + G + E ++ M +K G L + D+
Sbjct: 464 ITVVSVLSACLLPGDLLERG-KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 508 ETMPYTITLDMWRLILSVCVIHG-DLQVIETVAK 540
+ + W +L+ HG +V++ V+K
Sbjct: 523 NGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 185/418 (44%), Gaps = 40/418 (9%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
++ L C + +I+H + GL +GN + +Y +G ++++ +V
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV------ 419
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
LL+ MP RDVV+WN++I GYA + AL F M
Sbjct: 420 ------------LLQ-------------MPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Query: 139 QGAGMRPSSFTFSILTSLVSSPC----HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ G+ + T + S P K +H I+ +G + S+ + NSLI MY K G
Sbjct: 455 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE-SDEHVKNSLITMYAKCG 513
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
+ S + + +II+WN+++ A GH E L KMR + DQF+ S +S
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
+ L L++G+Q+ K+GF ++S + +AA D++SKC + + V++
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 633
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+IS+ H E+ F L I+P LL++ S V+ G+ + ++
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Query: 375 K-LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK--DLVSWNTIMMGLAYNGKV 429
+ G E ++ + + G + +A ++ +K DLV W +++ +G +
Sbjct: 694 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCKIHGNL 750
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 189 MYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
MY K G V + + M + +SWN++M R G + + F KM D + P F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 249 CSTLMSVCSNLRDL-DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ 307
++L++ C + +G QV F K G + + VS+A + L+ + S ++F E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 308 DRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI 367
+ TS++ Y+ E+ + ++ E + E +S ++SS + +G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 368 QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNG 427
QI V K G ES + ++L+ M G +D A +IF++ +D +SWN+I A NG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 428 KVSVTLDLFKELIR 441
+ + +F + R
Sbjct: 241 HIEESFRIFSLMRR 254
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 391 MYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT 450
MY KFG + A H+F+ +++ VSWNT+M G+ G ++ F+++ G+ P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 451 LAAVLLACNY-GSFVDEGIKI 470
+A+++ AC GS EG+++
Sbjct: 61 IASLVTACGRSGSMFREGVQV 81
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/622 (26%), Positives = 302/622 (48%), Gaps = 59/622 (9%)
Query: 4 FLKQTQ--GPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYS 61
F K+ Q S S +++L C + + +HAH LK + LD+Y+
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 62 DLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISG 121
++ DA +FD+ + N S+N +MI+G
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYN-------------------------------AMITG 356
Query: 122 YASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLS 178
Y+ AL LF + +G+ + S + +LV Q++G I+S + L
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL- 415
Query: 179 NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMR 238
+V + N+ I MYGK + +F V M++ D +SWN+++ A + G L F M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
+ + PD+FT +++ C+ L G ++ + K G NS V + ID++SKC +E
Sbjct: 476 RSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 534
Query: 299 DSVRLFTE-----------------QDRWDTALC---TSMISSYATHDLGEDALHLFVLT 338
++ ++ + ++ +C S+IS Y + EDA LF
Sbjct: 535 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Query: 339 LRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGII 398
+ I P ++ + +L + + +G QIHA V K +SD + STLV MY+K G +
Sbjct: 595 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDL 654
Query: 399 DDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
D+ +F ++ +D V+WN ++ G A++GK + LF+ +I E + P+ +T ++L AC
Sbjct: 655 HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC 714
Query: 459 NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDM 518
+ +D+G++ F+ M+ ++G+ P HY+ +V++L K+G +K A++++ MP+ +
Sbjct: 715 AHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI 774
Query: 519 WRLILSVCVIH-GDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDME 577
WR +L VC IH +++V E ++ +PQ Y +L+ Y G WE + +R++M
Sbjct: 775 WRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMR 834
Query: 578 QKCTKEFIGCSWFGMKNHVYTF 599
K+ GCSW +K+ ++ F
Sbjct: 835 GFKLKKEPGCSWVELKDELHVF 856
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 255/506 (50%), Gaps = 8/506 (1%)
Query: 4 FLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDL 63
FL Q S + S + C Q ++ K HAH + G T++ N L +Y++
Sbjct: 39 FLNQVNS--VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS 96
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
A VFD + ++ SWN + G KS + A F+ MPVRDVVSWNSM+SGY
Sbjct: 97 RDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL 156
Query: 124 SNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNV 180
NG S ++E+FV+M G+ TF+I+ S + Q+HG ++R G D ++V
Sbjct: 157 QNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD-TDV 215
Query: 181 VLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDA 240
V ++L+ MY K S V + + + +SW++++ C + LAL F +M+
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
Q ++++ C+ L +L G Q+ A K F + IV +A +D+++KC+ ++D+
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 335
Query: 301 VRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIF 360
LF + + +MI+ Y+ + G AL LF + + E +S + + ++
Sbjct: 336 QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 395
Query: 361 LPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIM 420
+ G+QI+ L K D +A+ + MY K + +A +F+E + +D VSWN I+
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAII 455
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGV 480
NGK TL LF ++R + PD T ++L AC GS + G++I S+ + G+
Sbjct: 456 AAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSI-VKSGM 513
Query: 481 KPGEEHYTYVVEMLSKAGMLKEAIDI 506
+++M SK GM++EA I
Sbjct: 514 ASNSSVGCSLIDMYSKCGMIEEAEKI 539
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 286/546 (52%), Gaps = 13/546 (2%)
Query: 65 HINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYAS 124
I++A +VF+ + + + + + G +S +L +A LFD MPVRDVVSWNSMISG
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 125 NGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV-HGRIIRSGMDLSNVVLG 183
G + A++LF EM P S T++V+ + +V + M + +
Sbjct: 110 CGDMNTAVKLFDEM------PERSVVS-WTAMVNGCFRSGKVDQAERLFYQMPVKDTAAW 162
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDA--E 241
NS++ Y + G VD + + M ++ISW +++ + AL F M +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSV 301
FTC +++ C+N G QV K+GF+Y VS++ I ++ C R+ DS
Sbjct: 223 STSRPFTC--VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 302 RLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
++F E+ A+ T+++S Y+ + EDAL +F LR +I P + + L+S S
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMM 421
++ G ++H + KLG E+DA + ++LV MY+ G ++DA+ +F + K +VSWN+I++
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFG-V 480
G A +G+ +F ++IR PD IT +L AC++ F+++G K+F+ M + +
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460
Query: 481 KPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAK 540
+HYT +V++L + G LKEA +++E M +W +LS C +H D+ E A
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAA 520
Query: 541 EIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQ 600
I + ++ Y++L+ Y GRW ++ ++R M++ + G SW ++ + F
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580
Query: 601 SNQLQH 606
S H
Sbjct: 581 SGDQPH 586
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 194/425 (45%), Gaps = 40/425 (9%)
Query: 48 TYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGM 107
++T + N C G ++ A ++F + K++ +WN + G L+ G++ +A +LF M
Sbjct: 130 SWTAMVNGCFRS----GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Query: 108 PVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS-ILTSLVSSPCH--AK 164
P ++V+SW +MI G N S +AL+LF M ++ +S F+ ++T+ ++P
Sbjct: 186 PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
QVHG II+ G L + SLI Y + S V + W +L+
Sbjct: 246 QVHGLIIKLGF-LYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
HE AL+ F M +LP+Q T ++ ++ CS L LD GK++ K+G ++ V
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
++ + ++S + D+V +F + + S+I A H G+ A +F +R N
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
P E + LLS+ S +E G ++ +M + ID +
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKL------------------FYYMSSGINHIDRKIQH 466
Query: 405 FNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFV 464
+ T + D+ L GK+ +L + ++ + P+ + A+L AC S V
Sbjct: 467 Y--TCMVDI---------LGRCGKLKEAEELIERMV---VKPNEMVWLALLSACRMHSDV 512
Query: 465 DEGIK 469
D G K
Sbjct: 513 DRGEK 517
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 43/304 (14%)
Query: 5 LKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLG 64
+K T P+T ++ C + + + VH +KLG Y+ + Y++
Sbjct: 221 IKSTSRPFT------CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK 274
Query: 65 HINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYAS 124
I D+ KVFD+ H+ W +++SGY+
Sbjct: 275 RIGDSRKVFDEKVHEQVAVW-------------------------------TALLSGYSL 303
Query: 125 NGFSSDALELFVEMQGAGMRPSSFTFSI---LTSLVSSPCHAKQVHGRIIRSGMDLSNVV 181
N DAL +F M + P+ TF+ S + + K++HG ++ G++ ++
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE-TDAF 362
Query: 182 LGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAE 241
+GNSL+ MY G V+ + SV + + K I+SWNS++ C + G + A F +M
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK-VGFVYNSIVS-SAAIDLFSKCNRLED 299
PD+ T + L+S CS+ L+KG+++F + + + I + +D+ +C +L++
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 300 SVRL 303
+ L
Sbjct: 483 AEEL 486
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/541 (28%), Positives = 277/541 (51%), Gaps = 5/541 (0%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G+ +A +LF M D V+WN MISGY +G ++L F EM +G+ P + TFS
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 153 LTSLVS---SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
L VS + + KQ+H I+R + L ++ L ++LI Y K V + ++ +
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D++ + +++ G + +L F + ++ P++ T +++ V L L G+++
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
F K GF + A ID+++KC R+ + +F + D SMI+ A D
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
A+ +F I +S LS+ + G IH + K SD STL+
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELI-REGMAPDR 448
MYAK G + A+++F K K++VSWN+I+ +GK+ +L LF E++ + G+ PD+
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
IT ++ +C + VDEG++ F SM ++G++P +EHY VV++ +AG L EA + V+
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 509 TMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWES 568
+MP+ +W +L C +H ++++ E + ++M+ +P Y++++ A+ WES
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 569 LVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGY 628
+ +VR M+++ ++ G SW + + F S + H + E+ EGY
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGY 824
Query: 629 V 629
+
Sbjct: 825 I 825
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 245/472 (51%), Gaps = 18/472 (3%)
Query: 88 LKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSS 147
+K L+ G++ +LFD + +D V WN M++GYA G ++ F M+ + P++
Sbjct: 180 IKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNA 239
Query: 148 FTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
TF + S+ +S Q+HG ++ SG+D + NSL++MY K G D + +
Sbjct: 240 VTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI-KNSLLSMYSKCGRFDDASKLFR 298
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
M + D ++WN ++ ++G E +L FY+M + +LPD T S+L+ S +L+
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
KQ+ + + + ++SA ID + KC + + +F++ + D + T+MIS Y
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
+ L D+L +F ++ I P E + +L I L +++G ++H + K GF++ +
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
++ MYAK G ++ A IF +D+VSWN+++ A + S +D+F+++ G+
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
Query: 445 APDRITLAAVLLAC------NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG 498
D ++++A L AC ++G + G I S+ ++ + + +++M +K G
Sbjct: 539 CYDCVSISAALSACANLPSESFGKAI-HGFMIKHSLASDVYSE------STLIDMYAKCG 591
Query: 499 MLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP 550
LK A+++ +TM + W I++ C HG L+ + E++E+ P
Sbjct: 592 NLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 218/502 (43%), Gaps = 48/502 (9%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S LL C + + K VHA + ++ +Y R L +Y+ G +D K+F +
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+ S+ + WNS+IS + NG + AL + +M
Sbjct: 99 RRSS-----------------------------IRPWNSIISSFVRNGLLNQALAFYFKM 129
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQV---HGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
G+ P TF L + + K + + GMD N + +SLI Y + G
Sbjct: 130 LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMD-CNEFVASSLIKAYLEYGK 188
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
+D + + + D + WN ++ + G + + F MR ++ P+ T ++SV
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C++ +D G Q+ G + + ++ + ++SKC R +D+ +LF R DT
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
MIS Y L E++L F + + P S LL S S F +E QIH + +
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
D L S L+ Y K + A +IF++ D+V + ++ G +NG +L++
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE---FGVKPGEEHY----T 488
F+ L++ ++P+ ITL ++L GI + + E F +K G ++
Sbjct: 429 FRWLVKVKISPNEITLVSILPVI--------GILLALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 489 YVVEMLSKAGMLKEAIDIVETM 510
V++M +K G + A +I E +
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERL 502
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 37/269 (13%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H +K G + +G +D+Y+ G +N A ++F+ +S ++ SW
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW------------ 510
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
NSMI+ A + S A+++F +M +G+ + S S
Sbjct: 511 -------------------NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 157 VS---SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
+ S K +HG +I+ + S+V ++LI MY K G + + +V TMK+ +I+S
Sbjct: 552 CANLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 214 WNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF-AF 271
WNS++ AC G + +L F++M + + PDQ T ++S C ++ D+D+G + F +
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
G + +DLF + RL ++
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 13/296 (4%)
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
E +P + S L+ CSN L +GKQV AF +S + +++ C D
Sbjct: 32 ETIPRRL--SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC 89
Query: 301 VRLFTEQD--RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
++F D R S+ISS+ + L AL + L + P CL+ +
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-C 148
Query: 359 IFLPVEVGIQ-IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWN 417
+ L GI + V LG + + +AS+L+ Y ++G ID +F+ KD V WN
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
++ G A G + + F + + ++P+ +T VL C +D G+++ +
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVV 267
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQ 533
GV ++ M SK G +A + M T+ W C+I G +Q
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV-TWN-----CMISGYVQ 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S L C + S +F K +H +K L + Y + +D+Y+ G++ A+ VF +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
KN SW NS+I+ ++G D+L LF EM
Sbjct: 606 KNIVSW-------------------------------NSIIAACGNHGKLKDSLCLFHEM 634
Query: 139 -QGAGMRPSSFTFSILTSLVSSPCHAKQVHG--RIIRSGMDLSNVVLGNS----LIAMYG 191
+ +G+RP TF ++SS CH V R RS + + ++ ++G
Sbjct: 635 VEKSGIRPDQITF---LEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFG 691
Query: 192 KVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDAE 241
+ G + ++ + +M D W +L+ AC + ELA K+ D +
Sbjct: 692 RAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLD 742
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/581 (29%), Positives = 286/581 (49%), Gaps = 28/581 (4%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
T+L C ++ + K VH +KL L+ L N +D+YS G I +A +F ++K
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N SWN + G G D DV+ M++G +D + + +
Sbjct: 357 NVVSWNTMVGGFSAEG---------DTHGTFDVL--RQMLAG--GEDVKADEVTILNAV- 402
Query: 140 GAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYS 199
P F S L SL K++H ++ + N ++ N+ +A Y K G + Y+
Sbjct: 403 -----PVCFHESFLPSL-------KELHCYSLKQEF-VYNELVANAFVASYAKCGSLSYA 449
Query: 200 FSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
V ++ + SWN+L+ ++ L+L +M+ + LLPD FT +L+S CS L
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
+ L GK+V F + + V + + L+ C L LF + ++I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
+ Y + + AL +F + I+ + + + S+ + +G + HA K E
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
DA +A +L+ MYAK G I + +FN K K SWN ++MG +G + LF+E+
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 440 IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGM 499
R G PD +T VL ACN+ + EG++ M++ FG+KP +HY V++ML +AG
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 749
Query: 500 LKEAIDIV-ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQ 558
L +A+ +V E M + +W+ +LS C IH +L++ E VA ++ E EP+ P Y++L+
Sbjct: 750 LDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSN 809
Query: 559 AYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
Y +G+WE + +VR+ M + ++ GCSW + V++F
Sbjct: 810 LYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 850
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 192/448 (42%), Gaps = 49/448 (10%)
Query: 25 CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW 84
C V VH +K GL ++GN + Y G + DAL
Sbjct: 197 CAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL-------------- 242
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM---QGA 141
QLFD MP R++VSWNSMI ++ NGFS ++ L EM G
Sbjct: 243 -----------------QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 142 GMRPSSFTFSILTSLVSSPCHAKQ--------VHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
G +F + T + P A++ VHG ++ +D +VL N+L+ MY K
Sbjct: 286 G----AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD-KELVLNNALMDMYSKC 340
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAG--HHELALAHFYKMRDAELLPDQFTCST 251
G + + + +++SWN+++ G H + ++ D+ T
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
+ VC + L K++ + K FVYN +V++A + ++KC L + R+F
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Query: 312 TALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA 371
++I +A + +L + + P + V LLS+ S + +G ++H
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 372 LVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSV 431
+ + E D + +++ +Y G + +F+ + K LVSWNT++ G NG
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 432 TLDLFKELIREGMAPDRITLAAVLLACN 459
L +F++++ G+ I++ V AC+
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACS 608
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 177/372 (47%), Gaps = 21/372 (5%)
Query: 103 LFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTFSILTSLVSSPC 161
+FD + +++ WN++IS Y+ N + LE F+EM + P FT+ + +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 162 HAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
VHG ++++G+ + +V +GN+L++ YG G V + + M + +++SWNS++
Sbjct: 202 DVGIGLAVHGLVVKTGL-VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
Query: 219 WACHRAGHHELALAHFYKMR----DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
G E + +M D +PD T T++ VC+ R++ GK V + K
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
+ ++++A +D++SKC + ++ +F + + +M+ ++ +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 335 F--VLTLRENIRPTEYMV-----SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
+L E+++ E + C SF L ++H K F + ++A+
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK-----ELHCYSLKQEFVYNELVANA 435
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
V YAK G + A +F+ + K + SWN ++ G A + ++LD ++ G+ PD
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 448 RITLAAVLLACN 459
T+ ++L AC+
Sbjct: 496 SFTVCSLLSACS 507
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 150/324 (46%), Gaps = 8/324 (2%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
+++H + S ++ VL +I MY G D S V ++ ++ WN+++ +
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 223 RAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
R ++ L F +M +LLPD FT ++ C+ + D+ G V K G V +
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
V +A + + + D+++LF + SMI ++ + E++ L + E
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEE 282
Query: 342 N----IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGI 397
N P + +L + + +G +H KL + + VL + L+ MY+K G
Sbjct: 283 NGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 342
Query: 398 IDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG--MAPDRITLAAVL 455
I +A IF K++VSWNT++ G + G T D+ ++++ G + D +T+ +
Sbjct: 343 ITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 402
Query: 456 LACNYGSFVDEGIKIF-FSMETEF 478
C + SF+ ++ +S++ EF
Sbjct: 403 PVCFHESFLPSLKELHCYSLKQEF 426
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 6/213 (2%)
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNS-IVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
L+ +D++ G+++ + N ++ + I +++ C +DS +F
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 311 DTALCTSMISSYATHDLGEDALHLFV-LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
+ ++ISSY+ ++L ++ L F+ + ++ P + C++ + + V +G+ +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
H LV K G D + + LV Y G + DAL +F+ ++LVSWN+++ + NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 430 SVTLDLFKELIRE----GMAPDRITLAAVLLAC 458
+ L E++ E PD TL VL C
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 290/606 (47%), Gaps = 38/606 (6%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
+Y K S S+ L C ++ F + +H +K+GL+ Y+ L +Y
Sbjct: 259 LYMLAKNNSVKLVSTSFTGAL-GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
S G + +A VF + K + WN+M++
Sbjct: 318 SKCGMVGEAETVFSCVVDKR-------------------------------LEIWNAMVA 346
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDL 177
YA N + AL+LF M+ + P SFT S + S S + K VH + + +
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQ- 405
Query: 178 SNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM 237
S + ++L+ +Y K G ++ V +M++ D+++W SL+ + G + AL F M
Sbjct: 406 STSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
Query: 238 RDAE--LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
+D + L PD +++ + C+ L L G QV K G V N V S+ IDL+SKC
Sbjct: 466 KDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG 525
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
E ++++FT + SMIS Y+ ++L E ++ LF L L + I P ++ +L
Sbjct: 526 LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
+ S + G +H +LG SD L + L+ MY K G A +IF + + K L++
Sbjct: 586 AISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT 645
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
WN ++ G +G L LF E+ + G +PD +T +++ ACN+ FV+EG IF M+
Sbjct: 646 WNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMK 705
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVI 535
++G++P EHY +V++L +AG+L+EA ++ MP +W +LS H ++++
Sbjct: 706 QDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELG 765
Query: 536 ETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNH 595
A++++ EP+ Y+ L Y G ++ M++K + GCSW + +
Sbjct: 766 ILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDR 825
Query: 596 VYTFQS 601
F S
Sbjct: 826 TNVFFS 831
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 268/554 (48%), Gaps = 47/554 (8%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +H L+ L+T ++L +D+Y G DA +VF +I K+
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS-------------- 235
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR--PSSFTFSI 152
+VV WN MI G+ +G +L+L++ + ++ +SFT ++
Sbjct: 236 ----------------NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGAL 279
Query: 153 -LTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI--LTMKKI 209
S + +Q+H +++ G+ ++ + SL++MY K G+V + +V + K++
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLH-NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+I WN+++ A + AL F MR +LPD FT S ++S CS L + GK V
Sbjct: 339 EI--WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
A FK S + SA + L+SKC D+ +F + D S+IS + +
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 330 DALHLF--VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
+AL +F + ++++P +++ + ++ + + G+Q+H + K G + + S+
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
L+ +Y+K G+ + AL +F +++V+WN+++ + N +++DLF ++ +G+ PD
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHY-TYVVEMLSKAGMLKEAIDI 506
+++ +VL+A + + + +G K G+ P + H +++M K G K A +I
Sbjct: 577 SVSITSVLVAISSTASLLKG-KSLHGYTLRLGI-PSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 507 VETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP--FPYLVLAQAYQMMG 564
+ M + +L W L++ HGD ++ E M++ ++P +L L A G
Sbjct: 635 FKKMQHK-SLITWNLMIYGYGSHGDCITALSLFDE-MKKAGESPDDVTFLSLISACNHSG 692
Query: 565 RWESLVRVRKDMEQ 578
E + + M+Q
Sbjct: 693 FVEEGKNIFEFMKQ 706
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 250/527 (47%), Gaps = 47/527 (8%)
Query: 12 YTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALK 71
+TS+ +LL C + ++++ K +H + LG ++ +++Y G ++ A++
Sbjct: 57 WTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQ 116
Query: 72 VFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDA 131
VFD S S G+ RDV WNSMI GY +
Sbjct: 117 VFDGWSQSQS------------------------GVSARDVTVWNSMIDGYFKFRRFKEG 152
Query: 132 LELFVEMQGAGMRPSSFTFSILTSLVSSPCH-----AKQVHGRIIRSGMDLSNVVLGNSL 186
+ F M G+RP +F+ SI+ S++ + KQ+HG ++R+ +D ++ L +L
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD-TDSFLKTAL 211
Query: 187 IAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAG--HHELALAHFYKMRDAELL 243
I MY K GL ++ V + ++ K +++ WN ++ +G L L K +L+
Sbjct: 212 IDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
FT + + CS + G+Q+ K+G + V ++ + ++SKC + ++ +
Sbjct: 272 STSFTGA--LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 304 FTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPV 363
F+ + +M+++YA +D G AL LF ++++ P + +S ++S S+
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 364 EVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGL 423
G +HA + K +S + + S L+ +Y+K G DA +F + KD+V+W +++ GL
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 424 AYNGKVSVTLDLFKELI--REGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVK 481
NGK L +F ++ + + PD + +V AC + G+++ SM +K
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-----IK 504
Query: 482 PGEEHYTYV----VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILS 524
G +V +++ SK G+ + A+ + +M T + W ++S
Sbjct: 505 TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMIS 550
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 171/373 (45%), Gaps = 23/373 (6%)
Query: 113 VSWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTFSIL---TSLVSSPCHAKQVHG 168
S NS I G AL L+ + G+ S FTF L S +++ + K +HG
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 169 RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI-------LTMKKIDIISWNSLMWAC 221
++ G + + SL+ MY K G +DY+ V + D+ WNS++
Sbjct: 85 SVVVLGWRY-DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC---SNLRDLDKGKQVFAFCFKVGFV 278
+ + + F +M + PD F+ S ++SV N R ++GKQ+ F +
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR-EEGKQIHGFMLRNSLD 202
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTALCTSMISSYATHDLGEDALHLFVL 337
+S + +A ID++ K D+ R+F E +D+ + L MI + + E +L L++L
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 338 TLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGI 397
+++ + L + S G QIH V K+G +D + ++L+ MY+K G+
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 398 IDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
+ +A +F+ K L WN ++ A N LDLF + ++ + PD TL+ V+
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 458 C------NYGSFV 464
C NYG V
Sbjct: 383 CSVLGLYNYGKSV 395
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 21/332 (6%)
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRD--AELLPDQFTCSTLMSVCSNLRDLDKGK 266
I S NS + A + G + AL H Y D + FT +L+ CS L +L GK
Sbjct: 22 ISPASINSGIRALIQKGEYLQAL-HLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW----------DTALCT 316
+ +G+ Y+ ++++ ++++ KC L+ +V++F D W D +
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF---DGWSQSQSGVSARDVTVWN 137
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF--SIFLPVEVGIQIHALVP 374
SMI Y ++ + F L +RP + +S ++S E G QIH +
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTL 433
+ ++D+ L + L+ MY KFG+ DA +F E + K ++V WN +++G +G +L
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
DL+ + + L AC+ G +I + + G+ T ++ M
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV-VKMGLHNDPYVCTSLLSM 316
Query: 494 LSKAGMLKEAIDIVETMPYTITLDMWRLILSV 525
SK GM+ EA + V + L++W +++
Sbjct: 317 YSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 278/521 (53%), Gaps = 11/521 (2%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTFSIL 153
G + ++ ++FD R++ WN+MI Y N +++ELF+E G+ + T+ +
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLA 324
Query: 154 TSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
S VS+ +Q HG + ++ +L +V+ NSL+ MY + G V SF V L+M++ D
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELP-IVIVNSLMVMYSRCGSVHKSFGVFLSMRERD 383
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
++SWN+++ A + G + L Y+M+ D T + L+S SNLR+ + GKQ A
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD--RWDTALCTSMISSYATHDLG 328
F + G + + +S ID++SK + S +LF D A SMIS Y +
Sbjct: 444 FLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
E +F L +NIRP V+ +L + S V++G Q+H + + + +AS L
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASAL 562
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
V MY+K G I A +F++TK ++ V++ T+++G +G + LF + G+ PD
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
IT AVL AC+Y +DEG+KIF M + ++P EHY + +ML + G + EA + V+
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 509 TMPYTITL-DMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFP--YLVLAQAYQMMGR 565
+ + ++W +L C +HG+L++ ETV++ + + + F ++L+ Y +
Sbjct: 683 GLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQK 742
Query: 566 WESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
W+S+ +VR+ M +K K+ +G S + +V F S +H
Sbjct: 743 WKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEH 783
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 247/519 (47%), Gaps = 47/519 (9%)
Query: 2 YTFLKQTQGPYT---SLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLD 58
Y+ +K+T P+T + +Y STL C K++ K VH H ++ N+ + N ++
Sbjct: 93 YSRMKKT-APFTNCDAYTYSSTL-KACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 59 LYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSM 118
+Y + D + D+ K +FD M ++VV+WN++
Sbjct: 151 MYVSCLNAPDCFEY--DVVRK-----------------------VFDNMRRKNVVAWNTL 185
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS---SPCHAKQVHGRIIRSGM 175
IS Y G +++A F M ++PS +F + VS S A +G +++ G
Sbjct: 186 ISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGD 245
Query: 176 D-LSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHF 234
+ + ++ + +S I+MY ++G ++ S V + + +I WN+++ + ++ F
Sbjct: 246 EYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF 305
Query: 235 YK-MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK 293
+ + E++ D+ T S S L+ ++ G+Q F K ++ ++ + ++S+
Sbjct: 306 LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSR 365
Query: 294 CNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCL 353
C + S +F D +MIS++ + L ++ L L ++ + V+ L
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Query: 354 LSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI--K 411
LS+ S E+G Q HA + + G + + + S L+ MY+K G+I + +F + +
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAER 484
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
D +WN+++ G NG T +F++++ + + P+ +T+A++L AC+ VD G ++
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 472 FSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAIDI 506
F ++ + +V V+M SKAG +K A D+
Sbjct: 545 -----GFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
+ G + + +F M RDVVSWN+MIS + NG + L L EMQ G + T +
Sbjct: 365 RCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA 424
Query: 153 LTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI--LTMK 207
L S S+ + KQ H +IR G+ + + LI MY K GL+ S +
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFEG--MNSYLIDMYSKSGLIRISQKLFEGSGYA 482
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ D +WNS++ + GH E F KM + + P+ T ++++ CS + +D GKQ
Sbjct: 483 ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ F + N V+SA +D++SK ++ + +F++ ++ T+MI Y H +
Sbjct: 543 LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGM 602
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
GE A+ LF+ I+P +LS+ S ++ G++I
Sbjct: 603 GERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 200/443 (45%), Gaps = 23/443 (5%)
Query: 88 LKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG--MRP 145
L + + G A QLFD +P V WN++I G+ N +AL + M+
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 146 SSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMY----GKVGLVDY 198
++T+S + + K VH +IR + S VV NSL+ MY +Y
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVV-HNSLMNMYVSCLNAPDCFEY 164
Query: 199 SF--SVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
V M++ ++++WN+L+ + G + A F M E+ P + +
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 257 SNLRDLDKGKQVFAFCFKVG--FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
S R + K + K+G +V + V S+AI ++++ +E S R+F + +
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 315 CTSMISSYATHDLGEDALHLFVLTL-RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+MI Y +D +++ LF+ + + I E S+ S VE+G Q H V
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
K E V+ ++L+ MY++ G + + +F + +D+VSWNT++ NG L
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPG---EEHYTYV 490
L E+ ++G D IT+ A+L A + + G + F ++ G E +Y+
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH-----AFLIRQGIQFEGMNSYL 459
Query: 491 VEMLSKAGMLKEAIDIVETMPYT 513
++M SK+G+++ + + E Y
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYA 482
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 46/234 (19%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+++L C SV+ K +H ++ L+ ++ + +D+YS G I A +F
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+NS V++ +MI GY +G A+ LF+ M
Sbjct: 585 RNS-------------------------------VTYTTMILGYGQHGMGERAISLFLSM 613
Query: 139 QGAGMRPSSFTF-SILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNS----LIAMYGKV 193
Q +G++P + TF ++L++ S + + +I ++ N+ + + M G+V
Sbjct: 614 QESGIKPDAITFVAVLSACSYSGLIDEGL--KIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 194 GLVDYSFSVILTMKKIDIIS--WNSLMWACHRAGHHELA------LAHFYKMRD 239
G V+ ++ + + + I+ W SL+ +C G ELA LA F K ++
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKN 725
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 270/542 (49%), Gaps = 17/542 (3%)
Query: 99 NACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS 158
NA ++FD M +VV+W MI+ GF +A+ F++M +G FT S + S +
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 159 SPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV---GLVDYSFSVILTMKKIDII 212
+ KQ+H IRSG+ + +V SL+ MY K G VD V M+ ++
Sbjct: 281 ELENLSLGKQLHSWAIRSGL-VDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 213 SWNSL----MWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
SW +L M C+ A A+ F +M + P+ FT S+ C NL D GKQ
Sbjct: 338 SWTALITGYMKNCNLATE---AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
V FK G NS V+++ I +F K +R+ED+ R F + + + +
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
E A L + + + + LLS + + G QIH+ V KLG + + +
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
L+ MY+K G ID A +FN + ++++SW +++ G A +G L+ F ++I EG+ P+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
+T A+L AC++ V EG + F SM + +KP EHY +V++L +AG+L +A + +
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
TMP+ + +WR L C +H + ++ + A++I+E +P P Y+ L+ Y G+WE
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWE 694
Query: 568 SLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEG 627
+R+ M+++ + GCSW + + ++ F H + E++ G
Sbjct: 695 ESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCG 754
Query: 628 YV 629
YV
Sbjct: 755 YV 756
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/592 (23%), Positives = 267/592 (45%), Gaps = 49/592 (8%)
Query: 11 PYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDAL 70
P S+++ S+LL C+ + K+VHA ++ + + L N + LYS G A
Sbjct: 59 PMDSVTF-SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 71 KVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSD 130
VF+ + + G RDVVSW++M++ Y +NG D
Sbjct: 118 DVFETMR------------------RFGK----------RDVVSWSAMMACYGNNGRELD 149
Query: 131 ALELFVEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLI 187
A+++FVE G+ P+ + ++ + S+ + G ++++G S+V +G SLI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 188 AMYGK-VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQ 246
M+ K + ++ V M ++++++W ++ C + G A+ F M + D+
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 247 FTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN---RLEDSVRL 303
FT S++ S C+ L +L GKQ+ ++ + G V + V + +D+++KC+ ++D ++
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 304 FTEQDRWDTALCTSMISSYATH-DLGEDALHLFV-LTLRENIRPTEYMVSCLLSSFSIFL 361
F + T++I+ Y + +L +A++LF + + ++ P + S +
Sbjct: 328 FDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMM 421
VG Q+ K G S++ +A++++ M+ K ++DA F K+LVS+NT +
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CNYGSFVDEGIKIFFSMETEFGV 480
G N L E+ + T A++L N GS + +G +I S + G+
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGS-IRKGEQI-HSQVVKLGL 505
Query: 481 KPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG-DLQVIETVA 539
+ ++ M SK G + A + M + W +++ HG ++V+ET
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS-WTSMITGFAKHGFAIRVLETFN 564
Query: 540 KEIMEREPQAPFPYLVLAQAYQMMG----RWESLVRVRKDMEQKCTKEFIGC 587
+ I E Y+ + A +G W + +D + K E C
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Query: 238 RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN-- 295
RD D T S+L+ C RD GK V A + +S++ ++ I L+SK
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 296 -RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLL 354
+ ED + D ++M++ Y + DA+ +FV L + P +Y + ++
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 355 SSFSIFLPVEVGIQIHALVPKLG-FESDAVLASTLVHMYAKF-GIIDDALHIFNETKIKD 412
+ S V VG + K G FESD + +L+ M+ K ++A +F++ +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
+V+W ++ G + F +++ G D+ TL++V AC
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 53/240 (22%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
++LL + S+ + +H+ +KLGL+ + N + +YS G I+ A +VF
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF----- 532
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+ M R+V+SW SMI+G+A +GF+ LE F +M
Sbjct: 533 --------------------------NFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGN-----------SLI 187
G++P+ T+ + S S H ++ G N + + ++
Sbjct: 567 IEEGVKPNEVTYVAILSACS--------HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMV 618
Query: 188 AMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQ 246
+ + GL+ +F I TM + D++ W + + AC H L + EL P++
Sbjct: 619 DLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRV--HSNTELGKLAARKILELDPNE 676
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 171/608 (28%), Positives = 300/608 (49%), Gaps = 39/608 (6%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
++T +K++ S+ S LL S K + + VH +K G Y+G+ +D+Y
Sbjct: 88 LFTCMKRSGSDVDGYSF-SRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMY 146
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
+ + DA + F +IS NS SWN + G ++ + A L M ++ V+ +
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD---- 202
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSP--CHA-KQVHGRIIRSGMDL 177
AG TF+ L +L+ P C+ KQVH ++++ G+
Sbjct: 203 --------------------AG------TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ- 235
Query: 178 SNVVLGNSLIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYK 236
+ + N++I+ Y G V + V + D+ISWNS++ + E A F +
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 295
Query: 237 MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK--C 294
M+ + D +T + L+S CS GK + K G + ++A I ++ +
Sbjct: 296 MQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 355
Query: 295 NRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLL 354
+ED++ LF D S+I+ +A L EDA+ F I+ +Y S LL
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALL 415
Query: 355 SSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DL 413
S S +++G QIHAL K GF S+ + S+L+ MY+K GII+ A F + K
Sbjct: 416 RSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 475
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFS 473
V+WN +++G A +G V+LDLF ++ + + D +T A+L AC++ + EG+++
Sbjct: 476 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 535
Query: 474 METEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQ 533
ME + ++P EHY V++L +AG++ +A +++E+MP + + L VC G+++
Sbjct: 536 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIE 595
Query: 534 VIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMK 593
+ VA ++E EP+ F Y+ L+ Y + +WE V+K M+++ K+ G SW ++
Sbjct: 596 MATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIR 655
Query: 594 NHVYTFQS 601
N V F +
Sbjct: 656 NQVKAFNA 663
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 221/470 (47%), Gaps = 35/470 (7%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N L +K G LG A LFD MP RD VSWN+MISGY S G DA LF M+ +G
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 145 PSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
++FS L ++S +QVHG +I+ G + NV +G+SL+ MY K V+ +F
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE-CNVYVGSSLVDMYAKCERVEDAFE 157
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRD--------------AELLPDQF 247
+ + + +SWN+L +A F ++RD A + D
Sbjct: 158 AFKEISEPNSVSWNAL-------------IAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE- 306
T + L+++ + + KQV A K+G + + +A I ++ C + D+ R+F
Sbjct: 205 TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGL 264
Query: 307 QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG 366
D SMI+ ++ H+L E A LF+ R + Y + LLS+ S G
Sbjct: 265 GGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFG 324
Query: 367 IQIHALVPKLGFESDAVLASTLVHMYAKF--GIIDDALHIFNETKIKDLVSWNTIMMGLA 424
+H +V K G E + L+ MY +F G ++DAL +F K KDL+SWN+I+ G A
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 425 YNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGE 484
G + F L + D +A+L +C+ + + G +I ++ T+ G E
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGFVSNE 443
Query: 485 EHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQV 534
+ ++ M SK G+++ A + + + W ++ HG QV
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV 493
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 163/353 (46%), Gaps = 14/353 (3%)
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG 225
H I+ G +S++ + N ++ Y K G + Y+ + M K D +SWN+++ G
Sbjct: 22 THCYAIKCG-SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 226 HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
E A F M+ + D ++ S L+ ++++ D G+QV K G+ N V S
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA-THDLGEDALHLFVLTLRENIR 344
+ +D+++KC R+ED+ F E ++ ++I+ + D+ L ++ ++ +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
+ LL+ + + Q+HA V KLG + + + + ++ YA G + DA +
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 405 FNE-TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
F+ KDL+SWN+++ G + + +LF ++ R + D T +L AC+
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS---- 316
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK------AGMLKEAIDIVETM 510
E +IF +K G E T L G +++A+ + E++
Sbjct: 317 -GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 272/516 (52%), Gaps = 12/516 (2%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
+ G + A LFD MP RDVV+W +MI+GYAS+ +++ A E F EM G P+ FT S
Sbjct: 56 FEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLS 115
Query: 152 -ILTSLVSSP--CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+L S + + VHG +++ GM+ S + + N+++ MY + + +I K
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGS-LYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 209 I-DIISWNSLMWACHRAGHHELALAHFYKM--RDAELLPDQFTCSTLMSVCSNLRDLDKG 265
+ + ++W +L+ G L + +M +AE+ P T + S +++ + G
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS--ASIDSVTTG 232
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
KQ+ A K GF N V ++ +DL+ +C L ++ F E + D ++IS
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 326 DLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLA 385
D E AL +F + P Y + L+++ + + G Q+H + + GF + LA
Sbjct: 293 DSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 386 STLVHMYAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
+ L+ MYAK G I D+ +F E ++LVSW ++M+G +G + ++LF +++ G+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
PDRI AVL AC + V++G+K F ME+E+G+ P + Y VV++L +AG + EA
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGDLQVIETV-AKEIMEREPQAPFPYLVLAQAYQMM 563
++VE MP+ W IL C H +I + A+++ME +P+ Y++L+ Y
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAE 531
Query: 564 GRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
G+W RVRK M K+ G SW ++N V++F
Sbjct: 532 GKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSF 567
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 197/419 (47%), Gaps = 40/419 (9%)
Query: 9 QGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLG-HIN 67
QG + S++L C + K + + +VH +KLG+ Y+ N +++Y+ +
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 68 DALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGF 127
A +F DI KN V+W ++I+G+ G
Sbjct: 165 AACLIFRDIKVKND-------------------------------VTWTTLITGFTHLGD 193
Query: 128 SSDALELFVEM--QGAGMRPSSFTFSILTSL-VSSPCHAKQVHGRIIRSGMDLSNVVLGN 184
L+++ +M + A + P T ++ S + S KQ+H +I+ G SN+ + N
Sbjct: 194 GIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ-SNLPVMN 252
Query: 185 SLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP 244
S++ +Y + G + + M+ D+I+WN+L+ R+ E AL F + +P
Sbjct: 253 SILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVP 311
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
+ +T ++L++ C+N+ L+ G+Q+ F+ GF N +++A ID+++KC + DS R+F
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 305 TE-QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPV 363
E DR + TSM+ Y +H G +A+ LF + IRP + +LS+ V
Sbjct: 372 GEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLV 431
Query: 364 EVGIQ-IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
E G++ + + + G D + + +V + + G I +A + K D +W I+
Sbjct: 432 EKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 145/279 (51%), Gaps = 2/279 (0%)
Query: 181 VLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDA 240
+L +LI Y + GLV+ + S+ M D+++W +++ + ++ A F++M
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN-RLED 299
P++FT S+++ C N++ L G V K+G + V +A +++++ C+ +E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 300 SVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSI 359
+ +F + + T++I+ + G L ++ L EN T Y ++ + + +
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 360 FLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTI 419
V G QIHA V K GF+S+ + ++++ +Y + G + +A H F+E + KDL++WNT+
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 420 MMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
+ L + S L +F+ +G P+ T +++ AC
Sbjct: 286 ISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 111/261 (42%), Gaps = 53/261 (20%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
++QG + ++L+ C + ++N + +H + G N L N +D+Y+ G+I
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNI 364
Query: 67 NDALKVFDDI-SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASN 125
D+ +VF +I +N SW SM+ GY S+
Sbjct: 365 PDSQRVFGEIVDRRNLVSW-------------------------------TSMMIGYGSH 393
Query: 126 GFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVV---- 181
G+ ++A+ELF +M +G+RP F V S C H ++ G+ NV+
Sbjct: 394 GYGAEAVELFDKMVSSGIRPDRIVFMA----VLSACR----HAGLVEKGLKYFNVMESEY 445
Query: 182 -------LGNSLIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAH 233
+ N ++ + G+ G + ++ ++ M K D +W +++ AC +A H ++
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC-KAHKHNGLISR 504
Query: 234 FYKMRDAELLPDQFTCSTLMS 254
+ EL P ++S
Sbjct: 505 LAARKVMELKPKMVGTYVMLS 525
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
+LA+ L+ Y + G++++A +F+E +D+V+W ++ G A + + + F E++++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 443 GMAPDRITLAAVLLACN------YGSFVDEGIKIFFSME 475
G +P+ TL++VL +C YG+ V G+ + ME
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALV-HGVVVKLGME 143
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 276/506 (54%), Gaps = 19/506 (3%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG-FSSDALELFVEMQGAGMRPSSFTFS 151
+SG A ++FD M +D++SWNS++SG + G F +A+ +F +M G+ +F
Sbjct: 221 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSF- 279
Query: 152 ILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
TS++++ CH A+Q+HG I+ G + S + +GN L++ Y K G+++ SV
Sbjct: 280 --TSVITTCCHETDLKLARQIHGLCIKRGYE-SLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
M + +++SW +++ + + + A++ F MR + P++ T L++ + +G
Sbjct: 337 MSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
++ C K GFV V ++ I L++K LED+ + F + + +MIS +A +
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 326 DLGEDALHLFVLTLRENIRPTEYMVSCLLSS--FSIFLPVEVGIQIHALVPKLGFESDAV 383
+AL +F+ E + P EY +L++ F+ + V+ G + HA + KLG S V
Sbjct: 452 GFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 510
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
++S L+ MYAK G ID++ +FNE K+ W +I+ + +G ++LF ++I+E
Sbjct: 511 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKEN 570
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+APD +T +VL ACN VD+G +IF M + ++P EHY+ +V+ML +AG LKEA
Sbjct: 571 VAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEA 630
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMM 563
+++ +P M + +L C +HG++++ VA+ ME +P+ Y+ + Y
Sbjct: 631 EELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEK 690
Query: 564 GRWESLVRVRKDMEQKCTKEFIGCSW 589
W+ +RK M +K + G SW
Sbjct: 691 EEWDKAAEIRKAMRKKNVSKEAGFSW 716
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 225/464 (48%), Gaps = 19/464 (4%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K+G+ NA +F+ + DVVSWN+++SG+ N AL V M+ AG+ +FT+S
Sbjct: 123 KAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYST 179
Query: 153 LTSL-VSSPCH--AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
S V S Q+ ++++G++ S++V+GNS I MY + G + V M
Sbjct: 180 ALSFCVGSEGFLLGLQLQSTVVKTGLE-SDLVVGNSFITMYSRSGSFRGARRVFDEMSFK 238
Query: 210 DIISWNSLMWACHRAGHHEL-ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D+ISWNSL+ + G A+ F M + D + +++++ C + DL +Q+
Sbjct: 239 DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQI 298
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
C K G+ V + + +SKC LE +F + + T+MISS
Sbjct: 299 HGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK----- 353
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
+DA+ +F+ + + P E L+++ ++ G++IH L K GF S+ + ++
Sbjct: 354 DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSF 413
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+ +YAKF ++DA F + ++++SWN ++ G A NG L +F E M P+
Sbjct: 414 ITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNE 472
Query: 449 ITLAAVLLACNYGS--FVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
T +VL A + V +G + + + G+ + +++M +K G + E+ +
Sbjct: 473 YTFGSVLNAIAFAEDISVKQGQRCHAHL-LKLGLNSCPVVSSALLDMYAKRGNIDESEKV 531
Query: 507 VETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP 550
M +W I+S HGD + + + +++ +E AP
Sbjct: 532 FNEMSQKNQF-VWTSIISAYSSHGDFETVMNLFHKMI-KENVAP 573
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 173/378 (45%), Gaps = 17/378 (4%)
Query: 100 ACQLFDGMPVRDVV-SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS 158
A +LFDG R+ S N IS + AL +F E G + L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMD-EVTLCLAL 85
Query: 159 SPCHAK-----QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
C Q+HG SG S V + N+++ MY K G D + + + D++S
Sbjct: 86 KACRGDLKRGCQIHGFSTTSGFT-SFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
WN+++ +++AL +M+ A ++ D FT ST +S C G Q+ +
Sbjct: 145 WNTILSGFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD-LGEDAL 332
K G + +V ++ I ++S+ + R+F E D S++S + G +A+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
+F +RE + + ++++ +++ QIH L K G+ES + + L+ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 393 AKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLA 452
+K G+++ +F++ +++VSW T+ ++ N +V+ +F + +G+ P+ +T
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTM---ISSNKDDAVS--IFLNMRFDGVYPNEVTFV 376
Query: 453 AVLLACNYGSFVDEGIKI 470
++ A + EG+KI
Sbjct: 377 GLINAVKCNEQIKEGLKI 394
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 38 HAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQL 97
HAH LKLGLN+ + + LD+Y+ G+I+++ KVF+++S KN W + G
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDF 556
Query: 98 GNACQLFDGM----PVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTFSI 152
LF M D+V++ S+++ G E+F M + + PS +S
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC 616
Query: 153 LTSLVSSPCHAKQVH 167
+ ++ K+
Sbjct: 617 MVDMLGRAGRLKEAE 631
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 293/602 (48%), Gaps = 41/602 (6%)
Query: 37 VHAHFLKLGLNTYTY-LGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSG 95
VH H + GL + +GN +++Y+ G I DA +VF ++ K
Sbjct: 335 VHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK---------------- 378
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
D VSWNSMI+G NG +A+E + M+ + P SFT S
Sbjct: 379 ---------------DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 156 LVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
+S AK Q+HG ++ G+DL NV + N+L+ +Y + G ++ + +M + D +
Sbjct: 424 SCASLKWAKLGQQIHGESLKLGIDL-NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV 482
Query: 213 SWNSLMWACHRAGHH-ELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
SWNS++ A R+ A+ F + A ++ T S+++S S+L + GKQ+
Sbjct: 483 SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGL 542
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTALCTSMISSYATHDLGED 330
K + +A I + KC ++ ++F+ +R D SMIS Y ++L
Sbjct: 543 ALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK 602
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVH 390
AL L L+ R +M + +LS+F+ +E G+++HA + ESD V+ S LV
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 662
Query: 391 MYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA-PDRI 449
MY+K G +D AL FN +++ SWN+++ G A +G+ L LF+ + +G PD +
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
T VL AC++ ++EG K F SM +G+ P EH++ + ++L +AG L + D +E
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 510 MPYTITLDMWRLILSVCVIHG--DLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
MP + +WR +L C ++ + A+ + + EP+ Y++L Y GRWE
Sbjct: 783 MPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWE 842
Query: 568 SLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEG 627
LV+ RK M+ K+ G SW MK+ V+ F + H +M G
Sbjct: 843 DLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Query: 628 YV 629
YV
Sbjct: 903 YV 904
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 19/442 (4%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N + L++G +A ++FD MP+R+ VSW ++SGY+ NG +AL +M G+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 145 PSSFTF-SILTSLVS----SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK-VGLVDY 198
+ + F S+L + +Q+HG + + + + V+ N LI+MY K +G V Y
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV-DAVVSNVLISMYWKCIGSVGY 158
Query: 199 SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSN 258
+ ++ + +SWNS++ +AG A F M+ P ++T +L++ +
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 259 LRDLDKG--KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
L + D +Q+ K G + + V S + F+K L + ++F + + +
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 317 SMISSYATHDLGEDALHLFV-LTLRENIRPTEYMVSCLLSSFSIF-LPVEVGI----QIH 370
++ GE+A LF+ + ++ P Y++ LLSSF + L EVG+ ++H
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVH 336
Query: 371 ALVPKLGFESDAV-LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
V G V + + LV+MYAK G I DA +F KD VSWN+++ GL NG
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
++ +K + R + P TL + L +C + G +I + G+
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI-HGESLKLGIDLNVSVSNA 455
Query: 490 VVEMLSKAGMLKEAIDIVETMP 511
++ + ++ G L E I +MP
Sbjct: 456 LMTLYAETGYLNECRKIFSSMP 477
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 222/477 (46%), Gaps = 32/477 (6%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA-GMRPSSFTFS 151
KSG L A ++F+ M R+ V+ N ++ G + +A +LF++M + P S+
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI- 313
Query: 152 ILTSLVSSPC-------HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
+L+S ++VHG +I +G+ V +GN L+ MY K G + + V
Sbjct: 314 LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY 373
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
M D +SWNS++ + G A+ + MR ++LP FT + +S C++L+
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
G+Q+ K+G N VS+A + L+++ L + ++F+ D S+I + A
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 325 HDLG-EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV 383
+ +A+ F+ R + S +LS+ S E+G QIH L K +A
Sbjct: 494 SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 384 LASTLVHMYAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
+ L+ Y K G +D IF+ + +D V+WN+++ G +N ++ LDL +++
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 443 GMAPDRITLAAVLLACNYGSFVDEGIKIF-----FSMETEFGVKPGEEHYTYVVEMLSKA 497
G D A VL A + ++ G+++ +E++ V + +V+M SK
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG------SALVDMYSKC 667
Query: 498 GMLKEAIDIVETMPYTITLDMWRLILSVCVIHGD----LQVIETVAKEIMEREPQAP 550
G L A+ TMP + W ++S HG L++ ET M+ + Q P
Sbjct: 668 GRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFET-----MKLDGQTP 718
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 189/392 (48%), Gaps = 22/392 (5%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
G +G A F + V++ VSWNS+IS Y+ G A +F MQ G RP+ +TF
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFG--- 210
Query: 155 SLVSSPCH--------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
SLV++ C +Q+ I +SG+ L+++ +G+ L++ + K G + Y+ V M
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKSGL-LTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRDA-ELLPDQFTCSTLMSVCSNLR----- 260
+ + ++ N LM R E A F M ++ P+ + L+S
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV--ILLSSFPEYSLAEEV 327
Query: 261 DLDKGKQVFAFCFKVGFV-YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
L KG++V G V + + + +++++KC + D+ R+F D+ SMI
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
+ + +A+ + R +I P + + LSS + ++G QIH KLG +
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK-VSVTLDLFKE 438
+ +++ L+ +YA+ G +++ IF+ D VSWN+I+ LA + + + + F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 439 LIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
R G +RIT ++VL A + SF + G +I
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 185/411 (45%), Gaps = 48/411 (11%)
Query: 22 LDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNS 81
L C S K + +H LKLG++ + N + LY++ G++N+ K+F + +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 82 TSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA 141
SWN + L +S + +P +A+ F+ Q A
Sbjct: 482 VSWNSIIGALARSER---------SLP---------------------EAVVCFLNAQRA 511
Query: 142 GMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
G + + TFS + S VSS KQ+HG +++ + N+LIA YGK G +D
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI-ADEATTENALIACYGKCGEMDG 570
Query: 199 SFSVILTM-KKIDIISWNSLMWACHRAG--HHEL---ALAHFYKMRDAELLPDQFTCSTL 252
+ M ++ D ++WNS++ +G H+EL AL + M D F +T+
Sbjct: 571 CEKIFSRMAERRDNVTWNSMI-----SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDT 312
+S +++ L++G +V A + + +V SA +D++SKC RL+ ++R F ++
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 313 ALCTSMISSYATHDLGEDALHLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IH 370
SMIS YA H GE+AL LF + L P +LS+ S +E G +
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
++ G S + + + G +D + +K +++ W T++
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
H+ + K + D L + L++ Y + G A +F+E +++ VSW I+ G + NG+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACN 459
L +++++EG+ ++ +VL AC
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQ 113
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/592 (25%), Positives = 299/592 (50%), Gaps = 37/592 (6%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+++ C S V K +HA +KL +++ N + +Y
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY------------------- 213
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
++ Q+ +A ++F G+P++D++SW+S+I+G++ GF +AL EM
Sbjct: 214 ------------VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEML 261
Query: 140 GAGM-RPSSFTFSILTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
G+ P+ + F SS P + Q+HG I+S + N + G SL MY + G
Sbjct: 262 SFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIAGCSLCDMYARCGF 320
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
++ + V +++ D SWN ++ G+ + A++ F +MR + +PD + +L+
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTAL 314
+ L +G Q+ ++ K GF+ + V ++ + +++ C+ L LF + ++ D+
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+++++ H+ + L LF L L P + LL +++G Q+H
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
K G + + + L+ MYAK G + A IF+ +D+VSW+T+++G A +G L
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
LFKE+ G+ P+ +T VL AC++ V+EG+K++ +M+TE G+ P +EH + VV++L
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYL 554
++AG L EA ++ M + +W+ +LS C G++ + + A+ I++ +P ++
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 555 VLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+L + G WE+ +R M++ K+ G SW +++ ++ F + + H
Sbjct: 681 LLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 238/497 (47%), Gaps = 40/497 (8%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+L+ C S +S+ + +H H L T L N L +Y G + DA +VF
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVF------ 125
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
D MP R++VS+ S+I+GY+ NG ++A+ L+++M
Sbjct: 126 -------------------------DFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 140 GAGMRPSSFTF-SILTSLVSSP--CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+ P F F SI+ + SS KQ+H ++I+ S+++ N+LIAMY + +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS-SHLIAQNALIAMYVRFNQM 219
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL-PDQFTCSTLMSV 255
+ V + D+ISW+S++ + G AL+H +M + P+++ + +
Sbjct: 220 SDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 279
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
CS+L D G Q+ C K N+I + D++++C L + R+F + +R DTA
Sbjct: 280 CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASW 339
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
+I+ A + ++A+ +F P + LL + + + + G+QIH+ + K
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLD 434
GF +D + ++L+ MY + ++F + + D VSWNTI+ + + L
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF-FSMETEFGVKPGEEHYTYVVEM 493
LFK ++ PD IT+ +L C S + G ++ +S++T G+ P + +++M
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT--GLAPEQFIKNGLIDM 517
Query: 494 LSKAGMLKEAIDIVETM 510
+K G L +A I ++M
Sbjct: 518 YAKCGSLGQARRIFDSM 534
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 190/435 (43%), Gaps = 45/435 (10%)
Query: 13 TSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKV 72
+SL CS+LL ++ +H +K L G D+Y+ G +N A +V
Sbjct: 275 SSLKACSSLL-------RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRV 327
Query: 73 FDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL 132
FD I ++ SWN+ + GL A+NG++ +A+
Sbjct: 328 FDQIERPDTASWNVIIAGL-------------------------------ANNGYADEAV 356
Query: 133 ELFVEMQGAGMRPSSFTFSILTSLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAM 189
+F +M+ +G P + + L + P Q+H II+ G L+++ + NSL+ M
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF-LADLTVCNSLLTM 415
Query: 190 YGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
Y + F++ + D +SWN+++ AC + L F M +E PD T
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
L+ C + L G QV + K G + + ID+++KC L + R+F D
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ 368
D +++I YA GE+AL LF I P +L++ S VE G++
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 369 IHA-LVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYN 426
++A + + G S +V + A+ G +++A +E K++ D+V W T++
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 655
Query: 427 GKVSVTLDLFKELIR 441
G V + + +++
Sbjct: 656 GNVHLAQKAAENILK 670
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 175/364 (48%), Gaps = 14/364 (3%)
Query: 116 NSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT--------SLVSSPCHAKQVH 167
N I+ + F +ALE F Q + SSF + T S S +++H
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQ----KNSSFKIRLRTYISLICACSSSRSLAQGRKIH 90
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHH 227
I+ S + +L N +++MYGK G + + V M + +++S+ S++ + G
Sbjct: 91 DHILNSNCKY-DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQG 149
Query: 228 ELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAA 287
A+ + KM +L+PDQF +++ C++ D+ GKQ+ A K+ + I +A
Sbjct: 150 AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNAL 209
Query: 288 IDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL-HLFVLTLRENIRPT 346
I ++ + N++ D+ R+F D +S+I+ ++ +AL HL + P
Sbjct: 210 IAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPN 269
Query: 347 EYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFN 406
EY+ L + S L + G QIH L K +A+ +L MYA+ G ++ A +F+
Sbjct: 270 EYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 407 ETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDE 466
+ + D SWN I+ GLA NG + +F ++ G PD I+L ++L A + +
Sbjct: 330 QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ 389
Query: 467 GIKI 470
G++I
Sbjct: 390 GMQI 393
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 275/519 (52%), Gaps = 5/519 (0%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTF 150
+K + A +LFD MP R+VVSW +M+ GY ++GF + L+LF M +G RP+ F
Sbjct: 80 VKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVA 139
Query: 151 SILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
+++ S+ KQ HG ++ G+ +S+ + N+L+ MY + V+ +
Sbjct: 140 TVVFKSCSNSGRIEEGKQFHGCFLKYGL-ISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D+ ++S + G + L K + + + + T + + + SNLRDL+ Q
Sbjct: 199 YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQ 258
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
V + + GF A I+++ KC ++ + R+F + + L T+++ +Y
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
E+AL+LF + + P EY + LL+S + ++ G +H LV K G+ + ++ +
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
LV+MYAK G I+DA F+ +D+V+WNT++ G +++G L+ F +I G P+
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
RIT VL AC++ FV++G+ F + +F V+P +HYT +V +LSKAGM K+A D +
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
T P + WR +L+ C + + ++ + VA+ +E+ P Y++L+ + WE
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558
Query: 568 SLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ +VR M + K+ G SW G++N + F + QH
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQH 597
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 267/503 (53%), Gaps = 12/503 (2%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N L + G++ A +FD M RDV+SWN+MISGY NG+ +DAL +F M +
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV- 214
Query: 145 PSSFTFSILTSLVSSPCHAKQVH-GRIIRSGMDLS----NVVLGNSLIAMYGKVGLVDYS 199
+ + S++ H K + GR + ++ + + N+L+ MY K G +D +
Sbjct: 215 --DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 200 FSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
V M++ D+I+W ++ G E AL M+ + P+ T ++L+SVC +
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
++ GK + + + + I+ ++ I +++KC R++ R+F+ ++ T +++I
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
+ ++L DAL LF RE++ P ++ LL +++ + + IH + K GF
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFN----ETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
S A+ LVH+Y+K G ++ A IFN + K KD+V W ++ G +G L +
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQV 512
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
F E++R G+ P+ IT + L AC++ V+EG+ +F M + HYT +V++L
Sbjct: 513 FMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLG 572
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLV 555
+AG L EA +++ T+P+ T +W +L+ CV H ++Q+ E A ++ E EP+ Y++
Sbjct: 573 RAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVL 632
Query: 556 LAQAYQMMGRWESLVRVRKDMEQ 578
LA Y +GRW+ + +VR ME
Sbjct: 633 LANIYAALGRWKDMEKVRSMMEN 655
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 247/541 (45%), Gaps = 46/541 (8%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
M L++ +S+ +LL+H + +S++ K +H H + G +
Sbjct: 1 MSEVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVS------------ 48
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
GHI L S ++ +C G + A +LF+ MP ++S+N +I
Sbjct: 49 ---GHILSTL----------SVTYALC-------GHITYARKLFEEMPQSSLLSYNIVIR 88
Query: 121 GYASNGFSSDALELFVEMQGAGMR--PSSFTFSILTSLVSSPCHAK---QVHGRIIRSGM 175
Y G DA+ +F+ M G++ P +T+ + K VHGRI+RS
Sbjct: 89 MYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWF 148
Query: 176 DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFY 235
V N+L+AMY G V+ + V MK D+ISWN+++ +R G+ AL F
Sbjct: 149 GRDKYV-QNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 236 KMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
M + + D T +++ VC +L+DL+ G+ V + V +A ++++ KC
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCG 267
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
R++++ +F +R D T MI+ Y E+AL L L E +RP ++ L+S
Sbjct: 268 RMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
L V G +H + SD ++ ++L+ MYAK +D +F+
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVD--EGIKIFFS 473
W+ I+ G N VS L LFK + RE + P+ TL ++L A Y + D + + I
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCY 445
Query: 474 METEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI---VETMPYTITLDMWRLILSVCVIHG 530
+ T+ G + T +V + SK G L+ A I ++ + + +W ++S +HG
Sbjct: 446 L-TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Query: 531 D 531
D
Sbjct: 505 D 505
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 278/527 (52%), Gaps = 15/527 (2%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
+K G + +A LFD MP RD++SWN+MISGY NG + LELF M+G + P T
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT-- 299
Query: 152 ILTSLVSSPCH-------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
LTS++S+ C + +H +I +G + ++ + NSL MY G + +
Sbjct: 300 -LTSVISA-CELLGDRRLGRDIHAYVITTGFAV-DISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
M++ DI+SW +++ + A+ + M + PD+ T + ++S C+ L DLD
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
G ++ K + IV++ I+++SKC ++ ++ +F R + TS+I+
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL 476
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
++ +AL +F+ ++ ++P ++ L++ + + G +IHA V + G D L
Sbjct: 477 NNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL 535
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
+ L+ MY + G ++ A FN K KD+ SWN ++ G + G+ S+ ++LF +++ +
Sbjct: 536 PNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
PD IT ++L C+ V +G+ F ME ++GV P +HY VV++L +AG L+EA
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMG 564
++ MP T +W +L+ C IH + + E A+ I E + ++ Y++L Y G
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 565 RWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKD 611
+W + +VR+ M++ GCSW +K V+ F S+ H K+
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKE 760
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 188/359 (52%), Gaps = 5/359 (1%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG-AGM 143
N L ++ G L +A +F M R++ SWN ++ GYA G+ +A+ L+ M G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 144 RPSSFTFS-ILTSLVSSP--CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSF 200
+P +TF +L + P K+VH ++R G +L ++ + N+LI MY K G V +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL-DIDVVNALITMYVKCGDVKSAR 251
Query: 201 SVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLR 260
+ M + DIISWN+++ G L F+ MR + PD T ++++S C L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 261 DLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS 320
D G+ + A+ GF + V ++ ++ ++ +LF+ +R D T+MIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES 380
Y + L + A+ + + +++++P E V+ +LS+ + ++ G+++H L K S
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
++A+ L++MY+K ID AL IF+ K+++SW +I+ GL N + L +++
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 188/404 (46%), Gaps = 20/404 (4%)
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGR------IIR 172
+ G +NG +A++L MQ + F L L C K+ I
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRL----CEWKRAQEEGSKVYSIAL 121
Query: 173 SGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALA 232
S M V LGN+ +AM+ + G + ++ V M + ++ SWN L+ + G+ + A+
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181
Query: 233 HFYKMR-DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLF 291
+++M + PD +T ++ C + DL +GK+V + G+ + V +A I ++
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 292 SKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVS 351
KC ++ + LF R D +MIS Y + + + L LF ++ P ++
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 352 CLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK 411
++S+ + +G IHA V GF D + ++L MY G +A +F+ + K
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
D+VSW T++ G YN +D ++ + ++ + PD IT+AAVL AC +D G+++
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 472 FSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAIDIVETMP 511
+ +K Y V + M SK + +A+DI +P
Sbjct: 422 -----KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +HAH L+ G+ +L N LD+Y G +N A F+ K+ TSWNI L G +
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSER 576
Query: 95 GQLGNACQLFDGM---PVR-DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
GQ +LFD M VR D +++ S++ G + + L F +M+ G+ P+ +
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHY 636
Query: 151 SILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIA--MYGKVGLVDYSFSVILTMKK 208
+ + L+ ++ H I + + V G L A ++ K+ L + S I + K
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDK 696
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/589 (27%), Positives = 297/589 (50%), Gaps = 37/589 (6%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S LL C+ ++S++ +K + AH LK G G++ +D
Sbjct: 69 SQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVD-------------------- 107
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
LK G + A Q+FDGM R +V+WNS+I+ + S +A+E++ M
Sbjct: 108 -----------ASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 139 QGAGMRPSSFTFSILT---SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+ P +T S + S +S A++ HG + G+++SNV +G++L+ MY K G
Sbjct: 157 ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
+ V+ +++ D++ +L+ + G A+ F M ++ P+++T ++++
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C NL+D+ GK + K GF ++ + ++ +C+ ++DS+R+F + +
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
TS+IS + E AL F +R++I+P + +S L S E G QIH +V K
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
GF+ D S L+ +Y K G D A +F+ D++S NT++ A NG LDL
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
F+ +I G+ P+ +T+ +VLLACN V+EG ++F S + + +HY +V++L
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLG 515
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLV 555
+AG L+EA +++ T L +WR +LS C +H +++ E + ++I+E EP ++
Sbjct: 516 RAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 556 LAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQL 604
++ Y G+W ++ ++ M+ K+ SW + +TF + L
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDL 623
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 36/313 (11%)
Query: 16 SYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDD 75
+Y S L+ C + K + K++H +K G + L +Y ++D+L+VF
Sbjct: 269 TYASVLIS-CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC 327
Query: 76 ISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELF 135
I + N SW S+ISG NG AL F
Sbjct: 328 IEYPNQVSW-------------------------------TSLISGLVQNGREEMALIEF 356
Query: 136 VEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
+M ++P+SFT S S+ +Q+HG + + G D G+ LI +YGK
Sbjct: 357 RKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYA-GSGLIDLYGK 415
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
G D + V T+ ++D+IS N+++++ + G AL F +M + L P+ T ++
Sbjct: 416 CGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSV 475
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDT 312
+ C+N R +++G ++F K + + + +DL + RLE++ L TE D
Sbjct: 476 LLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDL 535
Query: 313 ALCTSMISSYATH 325
L +++S+ H
Sbjct: 536 VLWRTLLSACKVH 548
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/597 (26%), Positives = 287/597 (48%), Gaps = 31/597 (5%)
Query: 16 SYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDD 75
S S +L C ++ + + +HA+ +K L + Y+G+ LD+Y +G I+ + +VF +
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE 168
Query: 76 ISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELF 135
+ +N+ +W + GL+ +G+ F M + + SD
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL---------------SDTYTFA 213
Query: 136 VEMQG-AGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ ++ AG+R + K +H +I G ++ + + NSL MY + G
Sbjct: 214 IALKACAGLRQVKY--------------GKAIHTHVIVRGF-VTTLCVANSLATMYTECG 258
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
+ + M + D++SW SL+ A R G A+ F KMR++++ P++ T +++ S
Sbjct: 259 EMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
C++L L G+Q+ +G + VS++ + ++S C L + LF D
Sbjct: 319 ACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIIS 378
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+++I Y GE+ F + +PT++ ++ LLS +E G Q+HAL
Sbjct: 379 WSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL 438
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
G E ++ + S+L++MY+K G I +A IF ET D+VS ++ G A +GK +D
Sbjct: 439 CFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAID 498
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
LF++ ++ G PD +T +VL AC + +D G F M+ + ++P +EHY +V++L
Sbjct: 499 LFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLL 558
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYL 554
+AG L +A ++ M + +W +L C GD++ A+ I+E +P +
Sbjct: 559 CRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALV 618
Query: 555 VLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKD 611
LA Y G E VRK+M+ K + G S +K+ V F S H +D
Sbjct: 619 TLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSED 675
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 211/442 (47%), Gaps = 16/442 (3%)
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
N + FD SH L+ L+ +G L A Q+FD MP D+VSW S+I Y +
Sbjct: 35 NQVMVKFDPNSH---------LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTAN 85
Query: 127 FSSDALELFVEMQ--GAGMRPSSFTFSILTSLV---SSPCHAKQVHGRIIRSGMDLSNVV 181
S +AL LF M+ + P + S++ S+ + + +H +++ + LS+V
Sbjct: 86 NSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSL-LSSVY 144
Query: 182 LGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAE 241
+G+SL+ MY +VG +D S V M + ++W +++ AG ++ L +F +M +E
Sbjct: 145 VGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSE 204
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSV 301
L D +T + + C+ LR + GK + GFV V+++ ++++C ++D +
Sbjct: 205 ELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGL 264
Query: 302 RLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
LF D TS+I +Y A+ F+ + P E + + S+ +
Sbjct: 265 CLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLS 324
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMM 421
+ G Q+H V LG ++++++ MY+ G + A +F + +D++SW+TI+
Sbjct: 325 RLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIG 384
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVK 481
G G F + + G P LA+ LL+ + V EG + ++ FG++
Sbjct: 385 GYCQAGFGEEGFKYFSWMRQSGTKPTDFALAS-LLSVSGNMAVIEGGRQVHALALCFGLE 443
Query: 482 PGEEHYTYVVEMLSKAGMLKEA 503
+ ++ M SK G +KEA
Sbjct: 444 QNSTVRSSLINMYSKCGSIKEA 465
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 156/575 (27%), Positives = 291/575 (50%), Gaps = 39/575 (6%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H+ +KLG ++ ++G ++ YS G ++ A VF+
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE---------------------- 205
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
G+ +D+V W ++S Y NG+ D+L+L M+ AG P+++TF T+L
Sbjct: 206 ---------GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD--TAL 254
Query: 157 VSSPC-----HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
+S AK VHG+I+++ L V G L+ +Y ++G + +F V M K D+
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRV-GVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
+ W+ ++ + G A+ F +MR+A ++P++FT S++++ C+ + G+Q+
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
KVGF + VS+A ID+++KC +++ +V+LF E + ++I Y G A
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
+F LR + TE S L + + +++G+Q+H L K ++++L+ M
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
YAK G I A +FNE + D+ SWN ++ G + +G L + + P+ +T
Sbjct: 494 YAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTF 553
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
VL C+ +D+G + F SM + G++P EHYT +V +L ++G L +A+ ++E +P
Sbjct: 554 LGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIP 613
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVR 571
Y ++ +WR +LS + + + A+EI++ P+ Y++++ Y +W ++
Sbjct: 614 YEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVAS 673
Query: 572 VRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+RK M++ K+ G SW + V+ F H
Sbjct: 674 IRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDH 708
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 234/515 (45%), Gaps = 43/515 (8%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+L C+ + K +H LK G CLDL++
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKG---------SCLDLFAT----------------- 87
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
NI L +K+G +A LFD MP R+ VS+ ++ GYA D + L+ +
Sbjct: 88 -----NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLH 138
Query: 140 GAGMRPSSFTFSILTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
G + F+ L S A+ +H I++ G D SN +G +LI Y G V
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYD-SNAFVGAALINAYSVCGSV 197
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
D + +V + DI+ W ++ G+ E +L MR A +P+ +T T +
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
L D K V K +V + V + L+++ + D+ ++F E + D +
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWS 317
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
MI+ + + +A+ LF+ + P E+ +S +L+ +I +G Q+H LV K+
Sbjct: 318 FMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV 377
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
GF+ D +++ L+ +YAK +D A+ +F E K+ VSWNT+++G G+ +F
Sbjct: 378 GFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMF 437
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF-FSMETEFGVKPGEEHYTYVVEMLS 495
+E +R ++ +T ++ L AC + +D G+++ +++T K + +++M +
Sbjct: 438 REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN--SLIDMYA 495
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
K G +K A + M TI + W ++S HG
Sbjct: 496 KCGDIKFAQSVFNEME-TIDVASWNALISGYSTHG 529
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 33/253 (13%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S++L+ C K + +H +K+G + Y+ N +D+Y+ ++ A+K+F ++S
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS 411
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
KN SWN + G G+ G A +F +R+ VS + F
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFR-EALRNQVSVTEVT---------------FSSA 455
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
GA +S + QVHG I++ + V + NSLI MY K G + +
Sbjct: 456 LGACASLASMDLGV------------QVHGLAIKTN-NAKKVAVSNSLIDMYAKCGDIKF 502
Query: 199 SFSVILTMKKIDIISWNSLM--WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ SV M+ ID+ SWN+L+ ++ H G L + K RD + P+ T ++S C
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK--PNGLTFLGVLSGC 560
Query: 257 SNLRDLDKGKQVF 269
SN +D+G++ F
Sbjct: 561 SNAGLIDQGQECF 573
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/646 (26%), Positives = 301/646 (46%), Gaps = 79/646 (12%)
Query: 33 FVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLL 92
F +H++ + L++ LG+ S G +++A ++FD + ++ +WN +
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
S +L +A +LF PV++ +SWN++ISGY +G +A LF EMQ G++P+ +T
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 153 LTSLVSSPC---HAKQVHGRIIRSGMDLS-NVVLGNSLIAMYGKVGLVDYSFSVILTMK- 207
+ + +S +Q+HG I++G DL NVV N L+AMY + + + + TM+
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVV--NGLLAMYAQCKRISEAEYLFETMEG 188
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ + ++W S++ + G A+ F +R +Q+T ++++ C+++ G Q
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
V K GF N V SA ID+++KC +E + L + D SMI L
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGL 308
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSI-FLPVEVGIQIHALVPKLGFESDAVLAS 386
+AL +F +++ ++ + +L+ F++ +++ H L+ K G+ + ++ +
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
LV MYAK GI+D AL +F KD++SW ++ G +NG L LF + G+ P
Sbjct: 369 ALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 447 DRITLAAVLLACN-----------YGSFVDEGIK------------------------IF 471
D+I A+VL A +G+++ G IF
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIF 488
Query: 472 FSME-------------------------------TEFGVKPGEEHYTYVVEMLSKAGML 500
SME T +G+ PG EHY ++++ ++G
Sbjct: 489 NSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDF 548
Query: 501 KEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAY 560
+ ++ M +W+ IL+ HG+++ E AK +ME EP PY+ L+ Y
Sbjct: 549 VKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMY 608
Query: 561 QMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
GR + VR+ M+ + + GCSW K V++F S +H
Sbjct: 609 SAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRH 654
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 26 LSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWN 85
LS+ + H +K G TY + N +D+Y+ G ++ ALKVF+ + K+ SW
Sbjct: 340 LSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISW- 398
Query: 86 ICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRP 145
++++G NG +AL+LF M+ G+ P
Sbjct: 399 ------------------------------TALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 146 SSF-TFSILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSV 202
T S+L++ +QVHG I+SG S++ + NSL+ MY K G ++ + +
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFP-SSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 203 ILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL---PDQFTC 249
+M+ D+I+W L+ + G E A +F MR + P+ + C
Sbjct: 488 FNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYAC 537
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/645 (25%), Positives = 315/645 (48%), Gaps = 69/645 (10%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+L++ C+S + + K H H ++ G T++ D YS A K+F
Sbjct: 35 SLIERCVSLRQL---KQTHGHMIRTG--TFS-------DPYS-------ASKLF------ 69
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+ L L A ++FD +P + +WN++I YAS ++ F++M
Sbjct: 70 -------AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 140 GAGM-RPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
P+ +TF L + VSS + +HG ++S + S+V + NSLI Y G
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG-SDVFVANSLIHCYFSCGD 181
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
+D + V T+K+ D++SWNS++ + G + AL F KM ++ T ++S
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C+ +R+L+ G+QV ++ + N +++A +D+++KC +ED+ RLF + D
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 316 TSM-------------------------------ISSYATHDLGEDALHLF-VLTLRENI 343
T+M IS+Y + +AL +F L L++N+
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
+ + + LS+ + +E+G IH+ + K G + + S L+HMY+K G ++ +
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
+FN + +D+ W+ ++ GLA +G + +D+F ++ + P+ +T V AC++
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
VDE +F ME+ +G+ P E+HY +V++L ++G L++A+ +E MP + +W +L
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 524 SVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKE 583
C IH +L + E ++E EP+ +++L+ Y +G+WE++ +RK M K+
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 584 FIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGY 628
GCS + ++ F S H + + ++++ GY
Sbjct: 602 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 302/574 (52%), Gaps = 13/574 (2%)
Query: 24 HCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTS 83
+CL+++SV VK+ + +K G + ++ L ++L +++ K+ + S
Sbjct: 117 YCLNKESVEVVKL-YDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD 175
Query: 84 WNICLKGLL----KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N+ L GLL K G++ +A ++F+ + +R+VV W SMI+GY N + L LF M+
Sbjct: 176 -NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 140 GAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+ + +T+ L + +S+ K HG +++SG++LS+ ++ SL+ MY K G +
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV-TSLLDMYVKCGDI 293
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ V +D++ W +++ G AL+ F KM+ E+ P+ T ++++S C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
+ +L+ G+ V KVG ++++ V++A + +++KC + D+ +F + D
Sbjct: 354 GLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWN 412
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
S+IS ++ + +AL LF E++ P V+ L S+ + + VG +HA KL
Sbjct: 413 SIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKL 472
Query: 377 GF--ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
GF S + + L+ YAK G A IF+ + K+ ++W+ ++ G G +L+
Sbjct: 473 GFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLE 532
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
LF+E++++ P+ T ++L AC + V+EG K F SM ++ P +HYT +V+ML
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 592
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYL 554
++AG L++A+DI+E MP + + L C +H + E V K++++ P Y+
Sbjct: 593 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYV 652
Query: 555 VLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCS 588
+++ Y GRW VR M+Q+ + G S
Sbjct: 653 LVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 224/477 (46%), Gaps = 13/477 (2%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
G +A +FD +P D W M+ Y N S + ++L+ + G R FS
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 155 SLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
+ + K++H ++++ NVVL L+ MY K G + + V + ++
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVP-SFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
+ W S++ + E L F +MR+ +L +++T TL+ C+ L L +GK
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
K G +S + ++ +D++ KC + ++ R+F E D + T+MI Y + +A
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
L LF I+P ++ +LS + +E+G +H L K+G D +A+ LVHM
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHM 386
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
YAK DA ++F KD+V+WN+I+ G + NG + L LF + E + P+ +T+
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 452 AAVLLAC-NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
A++ AC + GS +S++ F T +++ +K G + A I +T+
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 511 PYTITLDMWRLILSVCVIHGD----LQVIETVAKEIMEREPQAPFPYLVLAQAYQMM 563
T+ W ++ GD L++ E + K+ ++ ++ F ++ A + M
Sbjct: 507 EEKNTI-TWSAMIGGYGKQGDTIGSLELFEEMLKK-QQKPNESTFTSILSACGHTGM 561
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 196/435 (45%), Gaps = 42/435 (9%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
TL+ C +++ K H +K G+ + L LD+Y G I++A +VF++ SH
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+ W +MI GY NG ++AL LF +M+
Sbjct: 307 DLVMW-------------------------------TAMIVGYTHNGSVNEALSLFQKMK 335
Query: 140 GAGMRPSSFTFSILTS---LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
G ++P+ T + + S L+ + + VHG I+ G+ +NV N+L+ MY K
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQN 393
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ V + DI++WNS++ + G AL F++M + P+ T ++L S C
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSI--VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
++L L G + A+ K+GF+ +S V +A +D ++KC + + +F + +T
Sbjct: 454 ASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT 513
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALV 373
++MI Y +L LF L++ +P E + +LS+ V G + ++
Sbjct: 514 WSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMY 573
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVT 432
F + +V M A+ G ++ AL I + I+ D+ + + G + + +
Sbjct: 574 KDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLG 633
Query: 433 LDLFKELIREGMAPD 447
+ K+++ + PD
Sbjct: 634 EIVIKKMLD--LHPD 646
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 265/517 (51%), Gaps = 5/517 (0%)
Query: 99 NACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS 158
N+ Q+FD MP RDV SWN++IS + +G + ALELF M+ +G P+S + ++ S S
Sbjct: 160 NSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACS 219
Query: 159 SPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN 215
K++H + ++ G +L V ++L+ MYGK ++ + V M + +++WN
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDEYV-NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
S++ G + + +M P Q T ++++ CS R+L GK + + +
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
+ V+ + IDL+ KC + +F++ + MISSY + A+ ++
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKF 395
+ ++P + +L + S +E G QIH + + E+D +L S L+ MY+K
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 396 GIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
G +A IFN KD+VSW ++ +G+ L F E+ + G+ PD +TL AVL
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTI- 514
AC + +DEG+K F M +++G++P EHY+ ++++L +AG L EA +I++ P T
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Query: 515 TLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRK 574
++ + S C +H + + + +A+ ++E P Y+VL Y W++ RVR
Sbjct: 579 NAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRL 638
Query: 575 DMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKD 611
M++ ++ GCSW M + V F + H ++
Sbjct: 639 KMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAEN 675
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 244/516 (47%), Gaps = 38/516 (7%)
Query: 20 TLLDHCL-SQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+LL C S KS+ +K+VH L LGL L +++Y A VF++
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
++ DV WNS++SGY+ N D LE+F +
Sbjct: 68 RS------------------------------DVYIWNSLMSGYSKNSMFHDTLEVFKRL 97
Query: 139 QGAGM-RPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ P SFTF + + + +H +++SG + +VV+ +SL+ MY K
Sbjct: 98 LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGY-VCDVVVASSLVGMYAKFN 156
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
L + S V M + D+ SWN+++ +++G E AL F +M + P+ + + +S
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
CS L L++GK++ C K GF + V+SA +D++ KC+ LE + +F + R
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
SMI Y + + + + E RP++ ++ +L + S + G IH V
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI 336
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
+ +D + +L+ +Y K G + A +F++T+ SWN ++ G ++
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
++ +++ G+ PD +T +VL AC+ + +++G +I S+ +E ++ E + +++M
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI-SESRLETDELLLSALLDMY 455
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
SK G KEA I ++P + W +++S HG
Sbjct: 456 SKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHG 490
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 154/352 (43%), Gaps = 45/352 (12%)
Query: 9 QGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHIND 68
+G S + +++L C +++ K +H + ++ +N Y+ +DLY G N
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 69 ALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFS 128
A VF + SWN+ MIS Y S G
Sbjct: 363 AETVFSKTQKDVAESWNV-------------------------------MISSYISVGNW 391
Query: 129 SDALELFVEMQGAGMRPSSFTF-SILT--SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNS 185
A+E++ +M G++P TF S+L S +++ KQ+H I S ++ ++L ++
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL-SA 450
Query: 186 LIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPD 245
L+ MY K G +F + ++ K D++SW ++ A G AL F +M+ L PD
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Query: 246 QFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSVRL 303
T ++S C + +D+G + F+ + + I+ S ID+ + RL ++ +
Sbjct: 511 GVTLLAVLSACGHAGLIDEGLKFFSQ-MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Query: 304 F--TEQDRWDTALCTSMISS---YATHDLGEDALHLFVLTLRENIRPTEYMV 350
T + + L +++ S+ + H LG+ L V ++ + YMV
Sbjct: 570 IQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDD--ASTYMV 619
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 265/518 (51%), Gaps = 5/518 (0%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K +G+A LFD M RD+VSWN+MISGYAS G S+ L+L M+G G+RP TF
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 153 LTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
S+ + C + +H +I+++G D+ ++ L +LI MY K G + S+ V+ T+
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDV-DMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D++ W ++ R G E AL F +M + +++++ C+ L D G V
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH-DLG 328
+ + G+ ++ ++ I +++KC L+ S+ +F + D ++IS YA + DL
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
+ L + + + + V LL + S + VG IH +V + +++ + L
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
V MY+K G ++ A F+ KD+VSW ++ G ++GK + L+++ E + GM P+
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
+ AVL +C++ V +G+KIF SM +FGV+P EH VV++L +A +++A +
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609
Query: 509 TMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWES 568
++D+ +IL C +G +V + + ++++E +P Y+ L ++ M RW+
Sbjct: 610 ENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDD 669
Query: 569 LVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ M K+ G S M TF N H
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 238/532 (44%), Gaps = 37/532 (6%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+LL C S + ++F +H L G ++ Y+ + ++LY+ G + A KVF++
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEE---- 106
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
M RDVV W +MI Y+ G +A L EM+
Sbjct: 107 ---------------------------MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 140 GAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYS 199
G++P T + S V + +H + G D ++ + NS++ +Y K V +
Sbjct: 140 FQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFD-CDIAVMNSMLNLYCKCDHVGDA 198
Query: 200 FSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
+ M++ D++SWN+++ G+ L Y+MR L PDQ T +SV +
Sbjct: 199 KDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTM 258
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
DL+ G+ + K GF + + +A I ++ KC + E S R+ D T MI
Sbjct: 259 CDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMI 318
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
S E AL +F L+ + ++ +++S + ++G +H V + G+
Sbjct: 319 SGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT 378
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
D ++L+ MYAK G +D +L IF +DLVSWN I+ G A N + L LF+E+
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 440 -IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG 498
+ D T+ ++L AC+ + G K+ + ++P T +V+M SK G
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 499 MLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMER--EPQ 548
L+ A +++ + + W ++++ HG + + E + EP
Sbjct: 498 YLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALEIYSEFLHSGMEPN 548
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 189/414 (45%), Gaps = 11/414 (2%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAK---QVHGRII 171
+NS I+ +S+G L F M + P +FTF L +S +H +++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 172 RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELAL 231
+G S+ + +SL+ +Y K GL+ ++ V M++ D++ W +++ RAG A
Sbjct: 74 VNGFS-SDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 232 AHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLF 291
+ +MR + P TL+ + S + ++ + + + F GF + V ++ ++L+
Sbjct: 133 SLVNEMRFQGIKPGPV---TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 292 SKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVS 351
KC+ + D+ LF + ++ D +MIS YA+ + L L + +RP +
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 352 CLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK 411
LS +E+G +H + K GF+ D L + L+ MY K G + + + K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC-NYGSFVDEGIKI 470
D+V W ++ GL G+ L +F E+++ G +A+V+ +C GSF D G +
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF-DLGASV 368
Query: 471 FFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILS 524
G ++ M +K G L +++ I E M L W I+S
Sbjct: 369 -HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER-DLVSWNAIIS 420
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
++++ C S + VH + L+ G T N + +Y+ GH++ +L +F+ ++
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE 409
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
++ SWN ++ISGYA N AL LF EM
Sbjct: 410 RDLVSWN-------------------------------AIISGYAQNVDLCKALLLFEEM 438
Query: 139 QGAGMRP-SSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ ++ SFT L SS K +H +IRS + ++V +L+ MY K G
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV-DTALVDMYSKCG 497
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
++ + ++ D++SW L+ G ++AL + + + + P+ ++S
Sbjct: 498 YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 255 VCSNLRDLDKGKQVFAFCFK-VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ 307
CS+ + +G ++F+ + G N + +DL + R+ED+ + + E
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 272/523 (52%), Gaps = 16/523 (3%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
LK G + A LFD V+ VV+WNSMISGYA+NG +AL +F M+ +R S +F+
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 152 ILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+ L ++ +Q+H +++ G L + + +L+ Y K + + K+
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSKCTAM---LDALRLFKE 355
Query: 209 I----DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
I +++SW +++ + E A+ F +M+ + P++FT S +++ +
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP--- 412
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
+V A K + +S V +A +D + K ++E++ ++F+ D D ++M++ YA
Sbjct: 413 -SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 471
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLS-SFSIFLPVEVGIQIHALVPKLGFESDAV 383
E A+ +F + I+P E+ S +L+ + + G Q H K +S
Sbjct: 472 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
++S L+ MYAK G I+ A +F + KDLVSWN+++ G A +G+ LD+FKE+ +
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+ D +T V AC + V+EG K F M + + P +EH + +V++ S+AG L++A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMM 563
+ ++E MP +WR IL+ C +H ++ A++I+ +P+ Y++L+ Y
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Query: 564 GRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
G W+ +VRK M ++ K+ G SW +KN Y+F + H
Sbjct: 712 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 202/371 (54%), Gaps = 9/371 (2%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
+K + ++FD M R+VV+W ++ISGYA N + + L LF+ MQ G +P+SFTF+
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 152 ILTSLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+++ QVH ++++G+D + + NSLI +Y K G V + + +
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLD-KTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
+++WNS++ G AL FY MR + + + ++++ +C+NL++L +Q+
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC-TSMISSYATHDL 327
K GF+++ + +A + +SKC + D++RLF E + T+MIS + +D
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
E+A+ LF R+ +RP E+ S +L++ + P EV HA V K +E + + +
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTA 433
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
L+ Y K G +++A +F+ KD+V+W+ ++ G A G+ + +F EL + G+ P+
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 448 RITLAAVLLAC 458
T +++L C
Sbjct: 494 EFTFSSILNVC 504
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 179/372 (48%), Gaps = 5/372 (1%)
Query: 90 GLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT 149
G + S +L NA LFD P RD S+ S++ G++ +G + +A LF+ + GM
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 150 FSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
FS + + ++ C +Q+H + I+ G L +V +G SL+ Y K V M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGK 266
K+ ++++W +L+ R ++ L F +M++ P+ FT + + V + +G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
QV K G VS++ I+L+ KC + + LF + + SMIS YA +
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
L +AL +F +R +E + ++ + + Q+H V K GF D + +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 387 TLVHMYAKFGIIDDALHIFNETK-IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
L+ Y+K + DAL +F E + ++VSW ++ G N +DLF E+ R+G+
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 446 PDRITLAAVLLA 457
P+ T + +L A
Sbjct: 395 PNEFTYSVILTA 406
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 128/231 (55%), Gaps = 6/231 (2%)
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
++ST L +K G++ A ++F G+ +D+V+W++M++GYA G + A+++F E
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 138 MQGAGMRPSSFTFS----ILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
+ G++P+ FTFS + + +S KQ HG I+S +D S++ + ++L+ MY K
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD-SSLCVSSALLTMYAKK 543
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLM 253
G ++ + V ++ D++SWNS++ + G AL F +M+ ++ D T +
Sbjct: 544 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 254 SVCSNLRDLDKGKQVFAFCFK-VGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
+ C++ +++G++ F + +S +DL+S+ +LE ++++
Sbjct: 604 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 273 FKVGF-VYNSIVSSAAIDLFS--KCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
FK F +Y + V+ I F +RL ++ LF + D S++ ++ +
Sbjct: 16 FKPKFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQ 75
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
+A LF+ R + + S +L + G Q+H K GF D + ++LV
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLV 135
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
Y K D +F+E K +++V+W T++ G A N L LF + EG P+
Sbjct: 136 DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSF 195
Query: 450 TLAAVLLACNYGSFVDEGI 468
T AA L G +EG+
Sbjct: 196 TFAAAL-----GVLAEEGV 209
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/598 (25%), Positives = 293/598 (48%), Gaps = 41/598 (6%)
Query: 14 SLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVF 73
S S+ ++L+D + + K +HA L LGL +L + + S G I A +VF
Sbjct: 20 SDSFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 74 DDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALE 133
DD +P + WN++I GY+ N DAL
Sbjct: 77 DD-------------------------------LPRPQIFPWNAIIRGYSRNNHFQDALL 105
Query: 134 LFVEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMY 190
++ MQ A + P SFTF L S H + VH ++ R G D ++V + N LIA+Y
Sbjct: 106 MYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFD-ADVFVQNGLIALY 164
Query: 191 GKVGLVDYSFSVI--LTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
K + + +V L + + I+SW +++ A + G AL F +MR ++ PD
Sbjct: 165 AKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVA 224
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
++++ + L+DL +G+ + A K+G + + +++KC ++ + LF +
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ 368
+ L +MIS YA + +A+ +F + +++RP ++ +S+ + +E
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
++ V + + D ++S L+ M+AK G ++ A +F+ T +D+V W+ +++G +G+
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYT 488
+ L++ + R G+ P+ +T +L+ACN+ V EG FF+ + + P ++HY
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW-WFFNRMADHKINPQQQHYA 463
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQ 548
V+++L +AG L +A ++++ MP + +W +LS C H +++ E A+++ +P
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 549 APFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
Y+ L+ Y W+ + VR M++K + +GCSW ++ + F+ H
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 164/320 (51%), Gaps = 4/320 (1%)
Query: 141 AGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSF 200
+G+ SF S++ S + KQ+H R++ G+ S ++ LI G + ++
Sbjct: 16 SGIHSDSFYASLIDS-ATHKAQLKQIHARLLVLGLQFSGFLI-TKLIHASSSFGDITFAR 73
Query: 201 SVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLR 260
V + + I WN+++ R H + AL + M+ A + PD FT L+ CS L
Sbjct: 74 QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 261 DLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC--TSM 318
L G+ V A F++GF + V + I L++KC RL + +F + + T++
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF 378
+S+YA + +AL +F + +++P + +L++F+ ++ G IHA V K+G
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
E + L +L MYAK G + A +F++ K +L+ WN ++ G A NG +D+F E
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 439 LIREGMAPDRITLAAVLLAC 458
+I + + PD I++ + + AC
Sbjct: 314 MINKDVRPDTISITSAISAC 333
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 270/541 (49%), Gaps = 31/541 (5%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
VHA K G + + + +YS G I+ + +VF+D+
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL-------------------- 412
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
D + +++V N MI+ ++ + A+ LF M G+R F+ L S+
Sbjct: 413 --------DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV 462
Query: 157 VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNS 216
+ KQVHG ++SG+ L ++ +G+SL +Y K G ++ S+ + + D W S
Sbjct: 463 LDCLNLGKQVHGYTLKSGLVL-DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWAS 521
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
++ + G+ A+ F +M D PD+ T + +++VCS+ L +GK++ + + G
Sbjct: 522 MISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG 581
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFV 336
+ SA ++++SKC L+ + +++ D C+S+IS Y+ H L +D LF
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFG 396
+ + +S +L + ++ +G Q+HA + K+G ++ + S+L+ MY+KFG
Sbjct: 642 DMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 397 IIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLL 456
IDD F++ DL++W ++ A +GK + L ++ + +G PD++T VL
Sbjct: 702 SIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 457 ACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITL 516
AC++G V+E SM ++G++P HY +V+ L ++G L+EA + M
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 517 DMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDM 576
+W +L+ C IHG++++ + AK+ +E EP Y+ L+ +G W+ + RK M
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Query: 577 E 577
+
Sbjct: 882 K 882
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 229/496 (46%), Gaps = 41/496 (8%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+++ C + ++ F ++V H +K+G Y + + +D++S DA KVF D
Sbjct: 155 SVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N WN + G L++ G +FD LF EM
Sbjct: 215 NVYCWNTIIAGALRNQNYG---AVFD----------------------------LFHEMC 243
Query: 140 GAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+P S+T+S + + +S K V R+I+ G + +V + +++ +Y K G +
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE--DVFVCTAIVDLYAKCGHM 301
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ V + ++SW ++ ++ AL F +MR + + + T ++++S C
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTALC 315
+ + QV A+ FK GF +S V++A I ++SK ++ S ++F + D +
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV 421
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
MI+S++ A+ LF L+E +R E+ V LL S+ + +G Q+H K
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLK 478
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
G D + S+L +Y+K G ++++ +F KD W +++ G G + + L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
F E++ +G +PD TLAAVL C+ + G +I G+ G + + +V M S
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-HGYTLRAGIDKGMDLGSALVNMYS 597
Query: 496 KAGMLKEAIDIVETMP 511
K G LK A + + +P
Sbjct: 598 KCGSLKLARQVYDRLP 613
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 183/406 (45%), Gaps = 37/406 (9%)
Query: 31 VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
+N K VH + LK GL +G+ LYS G + ++ K+F I K+
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKD---------- 515
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
NAC W SMISG+ G+ +A+ LF EM G P T
Sbjct: 516 --------NAC-------------WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTL 554
Query: 151 -SILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
++LT S P K++HG +R+G+D + LG++L+ MY K G + + V +
Sbjct: 555 AAVLTVCSSHPSLPRGKEIHGYTLRAGID-KGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
++D +S +SL+ + G + F M + D F S+++ + + G Q
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
V A+ K+G V S+ + ++SK ++D + F++ + D T++I+SYA H
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG-IQIHALVPKLGFESDAVLAS 386
+AL ++ L + +P + +LS+ S VE ++++V G E +
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 387 TLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSV 431
+V + G + +A N IK D + W T++ +G+V +
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 205/429 (47%), Gaps = 20/429 (4%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
SG + +A +LFD +P DVVS N MISGY + ++L F +M G + ++
Sbjct: 96 NSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGS 155
Query: 153 LTSLVS---SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
+ S S +P ++ V I+ G VV ++LI ++ K + ++ V
Sbjct: 156 VISACSALQAPLFSELVCCHTIKMGYFFYEVV-ESALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
++ WN+++ R ++ F++M PD +T S++++ C++L L GK V
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
A K G + V +A +DL++KC + +++ +F+ T M+S Y +
Sbjct: 275 ARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
AL +F + V+ ++S+ V Q+HA V K GF D+ +A+ L+
Sbjct: 334 SALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALI 393
Query: 390 HMYAKFGIIDDALHIF---NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
MY+K G ID + +F ++ + +++V N ++ + + K + LF +++EG+
Sbjct: 394 SMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRT 451
Query: 447 DRITLAAVL--LAC-NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
D ++ ++L L C N G V G + + + V G +T + SK G L+E+
Sbjct: 452 DEFSVCSLLSVLDCLNLGKQV-HGYTLKSGLVLDLTV--GSSLFT----LYSKCGSLEES 504
Query: 504 IDIVETMPY 512
+ + +P+
Sbjct: 505 YKLFQGIPF 513
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 147/310 (47%), Gaps = 7/310 (2%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
K + ++R + +V L SL++ Y G + + + T+ + D++S N ++ +
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
E +L F KM ++ + +++S CS L+ + V K+G+ + +V
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVV 187
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS-SYATHDLGE--DALHLFVLTLR 340
SA ID+FSK R ED+ ++F + + ++I+ + + G D H + +
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
+P Y S +L++ + + G + A V K G E D + + +V +YAK G + +
Sbjct: 248 ---KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAE 303
Query: 401 ALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY 460
A+ +F+ +VSW ++ G + L++FKE+ G+ + T+ +V+ AC
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 461 GSFVDEGIKI 470
S V E ++
Sbjct: 364 PSMVCEASQV 373
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 44/269 (16%)
Query: 2 YTFLKQTQGPYTSL---------SYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYL 52
Y +L++ G ++ + S + +L C S S+ K +H + L+ G++ L
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 53 GNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDV 112
G+ +++YS K G L A Q++D +P D
Sbjct: 589 GSALVNMYS-------------------------------KCGSLKLARQVYDRLPELDP 617
Query: 113 VSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGR 169
VS +S+ISGY+ +G D LF +M +G SF S + +L QVH
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 170 IIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHEL 229
I + G+ + +G+SL+ MY K G +D + D+I+W +L+ + + G
Sbjct: 678 ITKIGL-CTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSN 258
AL + M++ PD+ T ++S CS+
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 274/540 (50%), Gaps = 4/540 (0%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K Q+ A ++FD MP RD+VSWN++++GY+ NG + ALE+ M ++PS T
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 153 LTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
+ VS+ K++HG +RSG D S V + +L+ MY K G ++ + + M +
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFD-SLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+++SWNS++ A + + + A+ F KM D + P + + C++L DL++G+ +
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
++G N V ++ I ++ KC ++ + +F + +MI +A +
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
DAL+ F ++P + ++++ + IH +V + + + + + LV
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MYAK G I A IF+ + + +WN ++ G +G L+LF+E+ + + P+ +
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
T +V+ AC++ V+ G+K F+ M+ + ++ +HY +V++L +AG L EA D +
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESL 569
MP ++++ +L C IH ++ E A+ + E P +++LA Y+ WE +
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKV 660
Query: 570 VRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
+VR M ++ ++ GCS +KN V++F S H K + ++ GYV
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV 720
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 204/428 (47%), Gaps = 9/428 (2%)
Query: 38 HAHFLK----LGLNTYTYLGNRCLDLYSDLGHINDALK-VFDDISHKNSTSWNICLKGLL 92
H HFL + N Y + L+ S L + L VF + ++ +
Sbjct: 21 HRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC 80
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
+ G + A ++F+ + + V +++M+ G+A AL+ FV M+ + P + F+
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 153 LTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
L + K++HG +++SG L + L MY K V+ + V M +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM-TGLENMYAKCRQVNEARKVFDRMPER 199
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D++SWN+++ + G +AL M + L P T +++ S LR + GK++
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
+ + GF +S+A +D+++KC LE + +LF + SMI +Y ++ +
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
+A+ +F L E ++PT+ V L + + +E G IH L +LG + + + ++L+
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MY K +D A +F + + + LVSWN +++G A NG+ L+ F ++ + PD
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 450 TLAAVLLA 457
T +V+ A
Sbjct: 440 TYVSVITA 447
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 138/273 (50%)
Query: 186 LIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPD 245
L++++ + G VD + V + + +++++ + + AL F +MR ++ P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 246 QFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFT 305
+ + L+ VC + +L GK++ K GF + + ++++KC ++ ++ ++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 306 EQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEV 365
D ++++ Y+ + + AL + EN++P+ + +L + S + V
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 366 GIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAY 425
G +IH + GF+S +++ LV MYAK G ++ A +F+ +++VSWN+++
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 426 NGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
N + +F++++ EG+ P +++ L AC
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 168/394 (42%), Gaps = 40/394 (10%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +H + ++ G ++ + +D+Y+ G + A ++FD + +N S
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS----------- 304
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
WNSMI Y N +A+ +F +M G++P+ S++
Sbjct: 305 --------------------WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD--VSVMG 342
Query: 155 SLVSSPCHAKQVHGRIIRS-----GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
+L + GR I G+D NV + NSLI+MY K VD + S+ ++
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLD-RNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
++SWN+++ + G AL +F +MR + PD FT ++++ + L K +
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
+ N V++A +D+++KC + + +F +MI Y TH G+
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLGFESDAVLASTL 388
AL LF + I+P ++S+ S VE G++ + + E +
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMG 422
V + + G +++A + +K V+ M+G
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 262/529 (49%), Gaps = 25/529 (4%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G + A +F G RDV +N++ISG+ NG DA+E + EM+ G+ P +TF
Sbjct: 108 KCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPS 166
Query: 153 L--TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK-KI 209
L S K+VHG + G D S+ +G+ L+ Y K V+ + V + +
Sbjct: 167 LLKGSDAMELSDVKKVHGLAFKLGFD-SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD 225
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D + WN+L+ + E AL F KMR+ + + T ++++S + D+D G+ +
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR-----WDTALCTSMISSYAT 324
K G + +VS+A ID++ K LE++ +F D W++ LC
Sbjct: 286 GLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCV-------- 337
Query: 325 HDLGED---ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF--- 378
HD D L LF L IRP ++ +L + + G +IH + G
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNR 397
Query: 379 -ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFK 437
S+ + ++L+ MY K G + DA +F+ ++KD SWN ++ G + LD+F
Sbjct: 398 KSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFS 457
Query: 438 ELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKA 497
+ R G+ PD IT +L AC++ F++EG MET + + P +HY V++ML +A
Sbjct: 458 CMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRA 517
Query: 498 GMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLA 557
L+EA ++ + P +WR ILS C +HG+ + K + E EP+ Y++++
Sbjct: 518 DKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMS 577
Query: 558 QAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
Y G++E ++ VR M Q+ K+ GCSW +KN V+TF + H
Sbjct: 578 NVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTH 626
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 183/352 (51%), Gaps = 6/352 (1%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
+Q+HG ++R G + G SL+ MY K GL+ + ++ + D+ +N+L+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAV-LVFGGSERDVFGYNALISGFV 137
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
G A+ + +MR +LPD++T +L+ S+ +L K+V FK+GF +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSDCY 196
Query: 283 VSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
V S + +SK +ED+ ++F E DR D+ L ++++ Y+ EDAL +F E
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
+ + + ++ +LS+F++ ++ G IH L K G SD V+++ L+ MY K +++A
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEA 316
Query: 402 LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
IF +DL +WN+++ Y G TL LF+ ++ G+ PD +TL VL C
Sbjct: 317 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376
Query: 462 SFVDEGIKI--FFSMETEFGVKPGEEH-YTYVVEMLSKAGMLKEAIDIVETM 510
+ + +G +I + + K E + +++M K G L++A + ++M
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSM 428
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 14/290 (4%)
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI-VSSAAIDLFSKCNRLEDSVRLFTE 306
TC + C+ +D G+Q+ F + GF+ +S ++ +++++KC + +V +F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 307 QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG 366
+R D ++IS + + DA+ + I P +Y LL +V
Sbjct: 122 SER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 367 IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAY 425
++H L KLGF+SD + S LV Y+KF ++DA +F+E + D V WN ++ G +
Sbjct: 181 -KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 426 NGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEE 485
+ L +F ++ EG+ R T+ +VL A +D G I VK G
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH-----GLAVKTGSG 294
Query: 486 HYTYV----VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGD 531
V ++M K+ L+EA I E M L W +L V GD
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDER-DLFTWNSVLCVHDYCGD 343
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
+K G L +A +FD M V+D SWN MI+GY AL++F M AG++P TF
Sbjct: 413 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITF- 471
Query: 152 ILTSLVSSPCHAKQVH-GRIIRSGMDLSNVVLGNS-----LIAMYGKVGLVDYSFSVILT 205
L+ + H+ ++ GR + M+ +L S +I M G+ ++ ++ + ++
Sbjct: 472 --VGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAIS 529
Query: 206 MKKID-IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
D + W S++ +C G+ +LAL ++ EL P+ LMS
Sbjct: 530 KPICDNPVVWRSILSSCRLHGNKDLALVAGKRLH--ELEPEHCGGYVLMS 577
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 274/521 (52%), Gaps = 7/521 (1%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTF 150
+K G++ A ++FD + D+V+W+SM+SG+ NG A+E F M + + P T
Sbjct: 107 IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 166
Query: 151 SILTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
L S + +++ VHG +IR G +++ L NSL+ Y K + ++ +
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFS-NDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ D+ISW++++ + G AL F M D P+ T ++ C+ DL++G++
Sbjct: 226 EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK 285
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ G VS+A +D++ KC E++ +F+ R D ++IS + + +
Sbjct: 286 THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGM 345
Query: 328 GEDALHLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
++ F ++ L N RP ++ +L S S +E H+ V K GF+S+ + +
Sbjct: 346 AHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGA 405
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG-MA 445
+LV +Y++ G + +A +FN +KD V W +++ G +GK + L+ F +++ +
Sbjct: 406 SLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVK 465
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID 505
P+ +T ++L AC++ + EG++IF M ++ + P EHY +V++L + G L AI+
Sbjct: 466 PNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIE 525
Query: 506 IVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGR 565
I + MP++ T + +L C IH + ++ ETVAK++ E E Y++++ Y + G
Sbjct: 526 ITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGE 585
Query: 566 WESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
WE++ ++R ++Q+ K+ + S ++ V+ F ++ H
Sbjct: 586 WENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELH 626
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 208/437 (47%), Gaps = 7/437 (1%)
Query: 99 NACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL-- 156
+A Q+F M R + WN+++ + + L F M +P +FT +
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 157 -VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN 215
+ + + +HG + + S++ +G+SLI MY K G + + + ++K DI++W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 216 SLMWACHRAGHHELALAHFYKMRDA-ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
S++ + G A+ F +M A ++ PD+ T TL+S C+ L + G+ V F +
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
GF + + ++ ++ ++K +++V LF D +++I+ Y + +AL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK 394
F + + P V C+L + + +E G + H L + G E++ +++ LV MY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 395 FGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFK-ELIREGMAPDRITLAA 453
++A +F+ KD+VSW ++ G NG +++ F L+ PD I +
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
VL +C+ F+++ K F S ++G +VE+ S+ G L A + +
Sbjct: 372 VLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 514 ITLDMWRLILSVCVIHG 530
T+ +W +++ IHG
Sbjct: 431 DTV-VWTSLITGYGIHG 446
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 158/331 (47%), Gaps = 17/331 (5%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N L KS A LF + +DV+SW+++I+ Y NG +++AL +F +M G
Sbjct: 202 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 145 PSSFT-FSILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
P+ T +L + ++ ++ H IR G++ + V + +L+ MY K + +++
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE-TEVKVSTALVDMYMKCFSPEEAYA 320
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLR 260
V + + D++SW +L+ G ++ F M + PD ++ CS L
Sbjct: 321 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 380
Query: 261 DLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS 320
L++ K ++ K GF N + ++ ++L+S+C L ++ ++F DT + TS+I+
Sbjct: 381 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 440
Query: 321 SYATHDLGEDALHLFVLTLREN-IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
Y H G AL F ++ + ++P E +LS+ S + G++I L+
Sbjct: 441 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV----- 495
Query: 380 SDAVLASTLVH------MYAKFGIIDDALHI 404
+D LA L H + + G +D A+ I
Sbjct: 496 NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 45/258 (17%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C + + + H ++ GL T + +D+Y +A VF I K
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK- 328
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELF-VEMQ 139
DVVSW ++ISG+ NG + ++E F + +
Sbjct: 329 ------------------------------DVVSWVALISGFTLNGMAHRSIEEFSIMLL 358
Query: 140 GAGMRPSSFTFSILTSLVSSPC-------HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
RP +IL V C AK H +I+ G D SN +G SL+ +Y +
Sbjct: 359 ENNTRPD----AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD-SNPFIGASLVELYSR 413
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCST 251
G + + V + D + W SL+ G AL F M + +E+ P++ T +
Sbjct: 414 CGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS 473
Query: 252 LMSVCSNLRDLDKGKQVF 269
++S CS+ + +G ++F
Sbjct: 474 ILSACSHAGLIHEGLRIF 491
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 273/555 (49%), Gaps = 16/555 (2%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N + Y G +A ++FD++S +N SWN + G +K+ + A +F+ MP R+VV
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRS 173
SW +M+ GY G +A LF M + F L + R +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID------DGRIDKARKLYD 165
Query: 174 GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAH 233
M + +VV ++I + G VD + + M++ ++++W +++ + ++A
Sbjct: 166 MMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 234 FYKMRDAELLPDQFTCS-TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFS 292
F E++P++ S T M + L + + F F+V + I +A I F
Sbjct: 226 F------EVMPEKTEVSWTSMLLGYTLSGRIEDAEEF---FEVMPMKPVIACNAMIVGFG 276
Query: 293 KCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSC 352
+ + + R+F + D A MI +Y +AL LF ++ +RP+ +
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
+LS + ++ G Q+HA + + F+ D +AS L+ MY K G + A +F+ KD
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF 472
++ WN+I+ G A +G L +F E+ G P+++TL A+L AC+Y ++EG++IF
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDL 532
SME++F V P EHY+ V+ML +AG + +A++++E+M +W +L C H L
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516
Query: 533 QVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGM 592
+ E AK++ E EP Y++L+ +W + VRK+M +F GCSW +
Sbjct: 517 DLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEV 576
Query: 593 KNHVYTFQSNQLQHY 607
V+ F ++++
Sbjct: 577 GKKVHMFTRGGIKNH 591
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 102/254 (40%), Gaps = 41/254 (16%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
Q QG S ++L C + S+ + + VHAH ++ + Y+ + + +Y G +
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
A VFD S K+ WN S+ISGYAS+G
Sbjct: 383 VKAKLVFDRFSSKDIIMWN-------------------------------SIISGYASHG 411
Query: 127 FSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLG--- 183
+AL++F EM +G P+ T ++ L + K G I M+ V
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVT--LIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 469
Query: 184 --NSLIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDA 240
+ + M G+ G VD + +I +M K D W +L+ AC H L LA +
Sbjct: 470 HYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK--THSRLDLAEVAAKKLF 527
Query: 241 ELLPDQFTCSTLMS 254
E PD L+S
Sbjct: 528 ENEPDNAGTYVLLS 541
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 274/550 (49%), Gaps = 44/550 (8%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N L Y G N+A++VF ++ K S + + G K G++ +A LFD M R+V+
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTFSILTSLVSSPCHAK---QVHGR 169
+W +MI GY GF D LF+ M+ G ++ +S T +++ + Q+HG
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 170 IIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHEL 229
+ R ++ ++ LGNSL++MY K+G + + +V MK D +SWNSL+ +
Sbjct: 301 VSRMPLEF-DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAID 289
A F KM +++ + D+ KG
Sbjct: 360 AYELFEKMPGKDMV--------------SWTDMIKG------------------------ 381
Query: 290 LFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYM 349
FS + V LF D T+MIS++ ++ E+AL F L++ + P Y
Sbjct: 382 -FSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 350 VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
S +LS+ + + G+QIH V K+ +D + ++LV MY K G +DA IF+
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIK 469
++VS+NT++ G +YNG L LF L G P+ +T A+L AC + +VD G K
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 470 IFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIH 529
F SM++ + ++PG +HY +V++L ++G+L +A +++ TMP +W +LS H
Sbjct: 561 YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTH 620
Query: 530 GDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
+ + E AK+++E EP + PY+VL+Q Y ++G+ R+ + K K+ G SW
Sbjct: 621 LRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSW 680
Query: 590 FGMKNHVYTF 599
+K V+ F
Sbjct: 681 IILKGEVHNF 690
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 162/335 (48%), Gaps = 42/335 (12%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H ++ L +LGN + +YS LG++ +A VF + +K+S SWN + GL++ Q
Sbjct: 297 IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQ 356
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYA-------------------------------SN 125
+ A +LF+ MP +D+VSW MI G++ SN
Sbjct: 357 ISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSN 416
Query: 126 GFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVL 182
G+ +AL F +M + P+S+TFS + S +S Q+HGR+++ + ++++ +
Sbjct: 417 GYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI-VNDLSV 475
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
NSL++MY K G + ++ + + + +I+S+N+++ G + AL F + +
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGK 535
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAA--IDLFSKCNRLEDS 300
P+ T L+S C ++ +D G + F K + A +DL + L+D+
Sbjct: 536 EPNGVTFLALLSACVHVGYVDLGWKYFK-SMKSSYNIEPGPDHYACMVDLLGRSGLLDDA 594
Query: 301 VRLFTEQD-RWDTALCTSMISSYATH---DLGEDA 331
L + + + + S++S+ TH DL E A
Sbjct: 595 SNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELA 629
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/557 (27%), Positives = 272/557 (48%), Gaps = 24/557 (4%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G+L ++ L RD+V+WN+++S N +ALE EM G+ P FT S
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS- 306
Query: 153 LTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
S++ + H K++H +++G N +G++L+ MY V V M
Sbjct: 307 --SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRD-AELLPDQFTCSTLMSVCSNLRDLDKG 265
I WN+++ + H + AL F M + A LL + T + ++ C +
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
+ + F K G + V + +D++S+ +++ ++R+F + + D +MI+ Y
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 326 DLGEDALHLF-----------VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+ EDAL L R +++P + +L S + + G +IHA
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
K +D + S LV MYAK G + + +F++ K++++WN I+M +G +D
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
L + ++ +G+ P+ +T +V AC++ VDEG++IF+ M+ ++GV+P +HY VV++L
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 495 SKAGMLKEAIDIVETMPYTIT-LDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPY 553
+AG +KEA ++ MP W +L IH +L++ E A+ +++ EP Y
Sbjct: 665 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 724
Query: 554 LVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXX 613
++LA Y G W+ VR++M+++ ++ GCSW + V+ F + H +
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH-PQSEKL 783
Query: 614 XXXXXXVWE-METEGYV 629
+WE M EGYV
Sbjct: 784 SGYLETLWERMRKEGYV 800
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 234/469 (49%), Gaps = 41/469 (8%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-S 151
K G G ++FD + R+ VSWNS+IS S ALE F M + PSSFT S
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 152 ILTSLVSSPCH-----AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
++T+ + P KQVH +R G +L++ ++ N+L+AMYGK+G + S ++ +
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFII-NTLVAMYGKLGKLASSKVLLGSF 262
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGK 266
D+++WN+++ + + AL + +M + PD+FT S+++ CS+L L GK
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 267 QVFAFCFKVGFV-YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
++ A+ K G + NS V SA +D++ C ++ R+F L +MI+ Y+ +
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 326 DLGEDALHLFV-----LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES 380
+ ++AL LF+ L N +V + S F E IH V K G +
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS-GAFSRKEA---IHGFVVKRGLDR 438
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL- 439
D + +TL+ MY++ G ID A+ IF + + +DLV+WNT++ G ++ L L ++
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 440 ----------IREGMAPDRITLAAVLLACNYGSFVDEGIKIFF-----SMETEFGVKPGE 484
R + P+ ITL +L +C S + +G +I ++ T+ V
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--- 555
Query: 485 EHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQ 533
+ +V+M +K G L+ + + + +P + W +I+ +HG+ Q
Sbjct: 556 ---SALVDMYAKCGCLQMSRKVFDQIPQKNVI-TWNVIIMAYGMHGNGQ 600
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 127/231 (54%), Gaps = 5/231 (2%)
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI-VSSAAIDLFSKCNRLEDSVR 302
PD + L+ ++L+D++ GKQ+ A +K G+ +S+ V++ ++L+ KC +
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEY-MVSCLLSSFSIFL 361
+F + S+ISS + + E AL F L EN+ P+ + +VS + + ++ +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 362 P--VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTI 419
P + +G Q+HA + G E ++ + +TLV MY K G + + + +DLV+WNT+
Sbjct: 215 PEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 420 MMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
+ L N ++ L+ +E++ EG+ PD T+++VL AC++ + G ++
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 184/410 (44%), Gaps = 22/410 (5%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRII 171
W ++ + +A+ +V+M G++P ++ F L V+ KQ+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 172 RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELAL 231
+ G + +V + N+L+ +Y K G + V + + + +SWNSL+ + E+AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 232 AHFYKMRDAELLPDQFTCSTLMSVCSNL---RDLDKGKQVFAFCFKVGFVYNSIVSSAAI 288
F M D + P FT ++++ CSNL L GKQV A+ + G + NS + + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLV 243
Query: 289 DLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEY 348
++ K +L S L D +++SS ++ +AL + E + P E+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 349 MVSCLLSSFSIFLPVEVGIQIHALVPKLG-FESDAVLASTLVHMYAKFGIIDDALHIFNE 407
+S +L + S + G ++HA K G + ++ + S LV MY + +F+
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 408 TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE-GMAPDRITLAAVLLAC-NYGSFV- 464
+ + WN ++ G + N L LF + G+ + T+A V+ AC G+F
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 465 DEGIKIFFSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAIDIVETM 510
E I F VK G + +V ++M S+ G + A+ I M
Sbjct: 424 KEAIHGFV-------VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 179/383 (46%), Gaps = 59/383 (15%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
++ ++++ G + + + ++ C+ + + + +H +K GL+ ++ N +D+Y
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
S LG I+ A+++F + + D+V+WN+MI+
Sbjct: 451 SRLGKIDIAMRIFGKMEDR-------------------------------DLVTWNTMIT 479
Query: 121 GYASNGFSSDALELFVEMQ--------GA---GMRPSSFTF-SILTS--LVSSPCHAKQV 166
GY + DAL L +MQ GA ++P+S T +IL S +S+ K++
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH 226
H I++ + ++V +G++L+ MY K G + S V + + ++I+WN ++ A G+
Sbjct: 540 HAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 227 HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK--VGFVYNSIVS 284
+ A+ M + P++ T ++ + CS+ +D+G ++F + K G +S
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHY 657
Query: 285 SAAIDLFSKCNRLEDSVRL-------FTEQDRWDTALCTSMISSYATHDLGEDALHLFVL 337
+ +DL + R++++ +L F + W + L S I + ++GE A +
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI--HNNLEIGEIAAQNLI- 714
Query: 338 TLRENIRPTEYMVSCLLSSFSIF 360
L N+ +++ + SS ++
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLW 737
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 272/532 (51%), Gaps = 4/532 (0%)
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
H ++ N+ LK L Q + LF ++ +NS+I+G+ +N + L+LF+
Sbjct: 42 HHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLS 101
Query: 138 MQGAGMRPSSFTFSILTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
++ G+ FTF ++ + K +H +++ G + +V SL+++Y G
Sbjct: 102 IRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFN-HDVAAMTSLLSIYSGSG 160
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
++ + + + +++W +L +G H A+ F KM + + PD + ++S
Sbjct: 161 RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLS 220
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
C ++ DLD G+ + + ++ NS V + ++L++KC ++E + +F D
Sbjct: 221 ACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVT 280
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
++MI YA++ ++ + LF+ L+EN++P ++ + LSS + +++G +L+
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
+ F ++ +A+ L+ MYAK G + +F E K KD+V N + GLA NG V ++
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
+F + + G++PD T +L C + + +G++ F ++ + +K EHY +V++
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYL 554
+AGML +A ++ MP +W +LS C + D Q+ ETV KE++ EP Y+
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 520
Query: 555 VLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
L+ Y + GRW+ VR M +K K+ G SW ++ V+ F ++ H
Sbjct: 521 QLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSH 572
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 183/427 (42%), Gaps = 41/427 (9%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C S +H+ +K G N L +YS G +NDA K+FD+I ++
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
+W ++ SGY ++G +A++LF +M
Sbjct: 177 VVTW-------------------------------TALFSGYTTSGRHREAIDLFKKMVE 205
Query: 141 AGMRPSSFTFSILTSLVSSPCHAKQV-HGRIIRSGMD----LSNVVLGNSLIAMYGKVGL 195
G++P S+ + ++S+ H + G I M+ N + +L+ +Y K G
Sbjct: 206 MGVKPDSY---FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
++ + SV +M + DI++W++++ + + F +M L PDQF+ +S
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C++L LD G+ + + F+ N +++A ID+++KC + +F E D +
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVP 374
+ IS A + + + +F T + I P LL ++ G++ +A+
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTL 433
+ +V ++ + G++DDA + + ++ + + W ++ G +
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 434 DLFKELI 440
+ KELI
Sbjct: 503 TVLKELI 509
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 273/578 (47%), Gaps = 51/578 (8%)
Query: 98 GNAC----QLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA-GMRPSSFTFSI 152
G++C +LFD +P RDV SWN+++S G S A +LF EM G SFT S
Sbjct: 231 GSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLST 290
Query: 153 LTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV---------------- 193
L S + +++HGR IR G+ + + + N+LI Y K
Sbjct: 291 LLSSCTDSSVLLRGRELHGRAIRIGL-MQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ 349
Query: 194 ---------------GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMR 238
G+VD + + + + + I++N+LM R GH AL F M
Sbjct: 350 DAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDML 409
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
+ F+ ++ + C + + +Q+ FC K G +N + +A +D+ ++C R+
Sbjct: 410 QRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMA 469
Query: 299 DSVRLFTEQDRWDTAL-----CTSMISSYATHDLGEDALHLFVLTL-RENIRPTEYMVSC 352
D+ +F D+W + L TS+I YA + L + A+ LF TL + + E ++
Sbjct: 470 DAEEMF---DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTL 526
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
+L+ E+G QIH K G+ SD L ++L+ MYAK DDA+ IFN + D
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHD 586
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY--GSFVDEGIKI 470
++SWN+++ L L+ + + + PD ITL V+ A Y + + +
Sbjct: 587 VISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDL 646
Query: 471 FFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
F SM+T + ++P EHYT V +L G+L+EA D + +MP + + R +L C IH
Sbjct: 647 FLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHS 706
Query: 531 DLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWF 590
+ V + VAK I+ +P+ P Y++ + Y G W +R++M ++ ++ SW
Sbjct: 707 NTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Query: 591 GMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGY 628
+N +++F + H KD + E GY
Sbjct: 767 IHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGY 804
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 210/481 (43%), Gaps = 74/481 (15%)
Query: 31 VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
V K VHA FLKL T LGN + Y LG +A+ VF +S
Sbjct: 96 VEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT---------- 144
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGM-RPSSFT 149
VVS+ ++ISG++ +AL++F M+ AG+ +P+ +T
Sbjct: 145 ---------------------VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYT 183
Query: 150 F-SILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK--VGLVDYSFSVIL 204
F +ILT+ VS Q+HG I++SG L++V + NSL+++Y K D +
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGF-LNSVFVSNSLMSLYDKDSGSSCDDVLKLFD 242
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP-DQFTCSTLMSVCSNLRDLD 263
+ + D+ SWN+++ + + G A FY+M E D FT STL+S C++ L
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 264 KGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
+G+++ ++G + V++A I +SK ++ L+ D T MI++Y
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 324 THDL-------------------------------GEDALHLFVLTLRENIRPTEYMVSC 352
+ + G AL LF L+ + T++ ++
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTS 422
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE--TKI 410
+ + + +V QIH K G + + + L+ M + + DA +F++ + +
Sbjct: 423 AVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 411 KDLVSWNTIMMGLAYNGKVSVTLDLF-KELIREGMAPDRITLAAVLLACNYGSFVDEGIK 469
+ +I+ G A NG + LF + L + + D ++L +L C F + G +
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 470 I 470
I
Sbjct: 543 I 543
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 167/385 (43%), Gaps = 42/385 (10%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
K VH ++ + LGN+LI+ Y K+G + V +++ ++S+ +L+ R
Sbjct: 100 KAVHASFLK--LREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSR 157
Query: 224 AGHHELALAHFYKMRDAELL-PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
AL F++MR A L+ P+++T +++ C + G Q+ K GF+ +
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVF 217
Query: 283 VSSAAIDLFSK--CNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLR 340
VS++ + L+ K + +D ++LF E + D A +++SS A LF R
Sbjct: 218 VSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
Query: 341 -ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF--------------------- 378
E + +S LLSS + + G ++H ++G
Sbjct: 278 VEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMK 337
Query: 379 ----------ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
DAV + ++ Y FG++D A+ IF K+ +++N +M G NG
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH 397
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGS--FVDEGIKIFFSMETEFGVKPGEEH 486
L LF ++++ G+ +L + + AC S V E I F +FG
Sbjct: 398 GLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC---IKFGTAFNPCI 454
Query: 487 YTYVVEMLSKAGMLKEAIDIVETMP 511
T +++M ++ + +A ++ + P
Sbjct: 455 QTALLDMCTRCERMADAEEMFDQWP 479
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 167/350 (47%), Gaps = 17/350 (4%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
STLL C + + +H +++GL + N + YS + +++ +
Sbjct: 289 STLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMA 348
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+++ ++ + + G + +A ++F + ++ +++N++++G+ NG AL+LF +M
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 139 QGAGMRPSSFTFSILTS---LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV-- 193
G+ + F+ + LVS ++Q+HG I+ G N + +L+ M +
Sbjct: 409 LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAF-NPCIQTALLDMCTRCER 467
Query: 194 -----GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK-MRDAELLPDQF 247
+ D S + + K + S++ R G + A++ F++ + + +L D+
Sbjct: 468 MADAEEMFDQWPSNLDSSK-----ATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEV 522
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ 307
+ + +++VC L + G Q+ + K G+ + + ++ I +++KC +D++++F
Sbjct: 523 SLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTM 582
Query: 308 DRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
D S+IS Y G++AL L+ + I+P ++ ++S+F
Sbjct: 583 REHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAF 632
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
L+ + + D++ K V A K+ + + +A I + K +++ +F
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 312 TALCTSMISSYATHDLGEDALHLFVLTLREN-IRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
T++IS ++ +L +AL +F + ++P EY +L++ +GIQIH
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 371 ALVPKLGFESDAVLASTLVHMYAK--FGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
L+ K GF + ++++L+ +Y K DD L +F+E +D+ SWNT++ L GK
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGK 264
Query: 429 VSVTLDLFKELIR-EGMAPDRITLAAVLLACNYGSFVDEG 467
DLF E+ R EG D TL+ +L +C S + G
Sbjct: 265 SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/590 (27%), Positives = 288/590 (48%), Gaps = 28/590 (4%)
Query: 37 VHAHFLKLGLNTYTYLG------NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
+ A L L+ +TY G RC DL DLG + L V + +S + N+ +
Sbjct: 137 LEAREANLKLDKFTYAGALGFCGERC-DL--DLGELLHGLVVVNGLSQQ-VFLINVLIDM 192
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
K G+L A LFD RD VSWNS+ISGY G + + L L +M G+ +++
Sbjct: 193 YSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYA- 251
Query: 151 SILTSLVSSPC---------HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
L S++ + C +H + GM+ ++V+ +L+ MY K G + +
Sbjct: 252 --LGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF-DIVVRTALLDMYAKNGSLKEAIK 308
Query: 202 VILTMKKIDIISWNSLMWACHRAGH-----HELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ M +++++N+++ + A F M+ L P T S ++ C
Sbjct: 309 LFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
S + L+ G+Q+ A K F + + SA I+L++ ED ++ F + D A T
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
SMI + ++ E A LF +IRP EY VS ++S+ + F + G QI K
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKS 488
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
G ++ + ++ + MYAK G + A +F E + D+ +++ ++ LA +G + L++F
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
+ + G+ P++ VL+AC +G V +G+K F M+ ++ + P E+H+T +V++L +
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGR 608
Query: 497 AGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVL 556
G L +A +++ + + WR +LS C ++ D + + VA+ +ME EP+A Y++L
Sbjct: 609 TGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 668
Query: 557 AQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
Y G S VR+ M + K+ SW + N ++F L H
Sbjct: 669 HNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSH 718
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 224/459 (48%), Gaps = 42/459 (9%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K +LG A QLFD MP R+++S+NS+ISGY GF A+ELF+E + A ++ FT++
Sbjct: 94 KCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 153 LTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
C + +HG ++ +G+ V L N LI MY K G +D + S+ +
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGLS-QQVFLINVLIDMYSKCGKLDQAMSLFDRCDER 212
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRD--LDKGK 266
D +SWNSL+ R G E L KM RD L S L + C NL + ++KG
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM 272
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSY---- 322
+ + K+G ++ +V +A +D+++K L+++++LF+ + +MIS +
Sbjct: 273 AIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 323 -ATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESD 381
T + +A LF+ R + P+ S +L + S +E G QIHAL+ K F+SD
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 382 AVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
+ S L+ +YA G +D + F T +D+ SW +++ N ++ DLF++L
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS 452
Query: 442 EGMAPDRITLAAVLLACN-----------YGSFVDEGIKIFFSMETE------------- 477
+ P+ T++ ++ AC G + GI F S++T
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512
Query: 478 -----FGVK-PGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
V+ P Y+ ++ L++ G EA++I E+M
Sbjct: 513 ANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 159/316 (50%), Gaps = 9/316 (2%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
K HG +I+S ++ +L N+L+ MY K + ++ + M + +IIS+NSL+
Sbjct: 66 GKLAHGHMIKSSLNPCLYLL-NNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
+ G +E A+ F + R+A L D+FT + + C DLD G+ + G
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 283 VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLREN 342
+ + ID++SKC +L+ ++ LF D D S+IS Y E+ L+L R+
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 343 IRPTEYMVSCLLSSFSIFLP---VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
+ T Y + +L + I L +E G+ IH KLG E D V+ + L+ MYAK G +
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 400 DALHIFNETKIKDLVSWNTIMMGLAYNGKV-----SVTLDLFKELIREGMAPDRITLAAV 454
+A+ +F+ K++V++N ++ G ++ S LF ++ R G+ P T + V
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVV 364
Query: 455 LLACNYGSFVDEGIKI 470
L AC+ ++ G +I
Sbjct: 365 LKACSAAKTLEYGRQI 380
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 132/302 (43%), Gaps = 38/302 (12%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
Q +G S S S +L C + K++ + + +HA K + ++G+ ++LY+ +G
Sbjct: 350 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 409
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
D ++ F S ++ + SW SMI + N
Sbjct: 410 EDGMQCFASTSKQD-------------------------------IASWTSMIDCHVQNE 438
Query: 127 FSSDALELFVEMQGAGMRPSSFTFSILTSLV---SSPCHAKQVHGRIIRSGMDLSNVVLG 183
A +LF ++ + +RP +T S++ S ++ +Q+ G I+SG+D V
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL 243
+S I+MY K G + + V + ++ D+ ++++++ + + G AL F M+ +
Sbjct: 499 SS-ISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSV 301
P+Q ++ C + + +G + F C K + N + +DL + RL D+
Sbjct: 558 PNQQAFLGVLIACCHGGLVTQGLKYFQ-CMKNDYRINPNEKHFTCLVDLLGRTGRLSDAE 616
Query: 302 RL 303
L
Sbjct: 617 NL 618
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 248/445 (55%), Gaps = 1/445 (0%)
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
AK HG+IIR ++ +V L N LI Y K G V+ + V M + ++SWN+++
Sbjct: 79 EAKACHGKIIRIDLE-GDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLY 137
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
R AL F +MR+ +FT S+++S C D + K++ K N
Sbjct: 138 TRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNL 197
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
V +A +DL++KC ++D+V++F + +SM++ Y + E+AL L+ R
Sbjct: 198 YVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 257
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
++ ++ +S ++ + S + G Q+HA++ K GF S+ +AS+ V MYAK G + ++
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 402 LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
IF+E + K+L WNTI+ G A + + + LF+++ ++GM P+ +T +++L C +
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 462 SFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRL 521
V+EG + F M T +G+ P HY+ +V++L +AG+L EA ++++++P+ T +W
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGS 437
Query: 522 ILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCT 581
+L+ C ++ +L++ E A+++ E EP+ +++L+ Y +WE + + RK +
Sbjct: 438 LLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497
Query: 582 KEFIGCSWFGMKNHVYTFQSNQLQH 606
K+ G SW +K+ V+TF + H
Sbjct: 498 KKVRGKSWIDIKDKVHTFSVGESGH 522
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 181/344 (52%), Gaps = 6/344 (1%)
Query: 82 TSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA 141
T N+ + K G + A Q+FDGM R +VSWN+MI Y N S+AL++F+EM+
Sbjct: 97 TLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNE 156
Query: 142 GMRPSSFTFSILTSLVSSPCHA---KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
G + S FT S + S C A K++H +++ +DL N+ +G +L+ +Y K G++
Sbjct: 157 GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDL-NLYVGTALLDLYAKCGMIKD 215
Query: 199 SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSN 258
+ V +M+ ++W+S++ + ++E AL + + + L +QFT S+++ CSN
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 275
Query: 259 LRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSM 318
L L +GKQ+ A K GF N V+S+A+D+++KC L +S +F+E + L ++
Sbjct: 276 LAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV-PKLG 377
IS +A H ++ + LF ++ + P E S LLS VE G + L+ G
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 395
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIM 420
+ V S +V + + G++ +A + S W +++
Sbjct: 396 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 261/512 (50%), Gaps = 40/512 (7%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS---SPCHAKQVHGRII 171
+N M+ A + L LF E++G G+ P +FT ++ + ++VHG +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 172 RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELAL 231
++G++ + V NSL+ MY +G ++ + V M + D++SWN L+ + G E A+
Sbjct: 74 KAGLEFDSYV-SNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 232 AHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
F +M +++ L D+ T + +S CS L++L+ G++++ F F + + +A +D+
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDM 191
Query: 291 FSKCNRLE------DSVR-------------------------LFTEQDRWDTALCTSMI 319
F KC L+ DS+R LF D L T+M+
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
+ Y + ++AL LF IRP +++ LL+ + +E G IH + +
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT 311
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
D V+ + LV MYAK G I+ AL +F E K +D SW +++ GLA NG LDL+ E+
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Query: 440 IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGM 499
G+ D IT AVL ACN+G FV EG KIF SM V+P EH + ++++L +AG+
Sbjct: 372 ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGL 431
Query: 500 LKEAIDIVETM---PYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVL 556
L EA ++++ M + ++ +LS +G++++ E VA+++ + E + +L
Sbjct: 432 LDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLL 491
Query: 557 AQAYQMMGRWESLVRVRKDMEQKCTKEFIGCS 588
A Y RWE + VR+ M+ ++F GCS
Sbjct: 492 ASVYASANRWEDVTNVRRKMKDLGIRKFPGCS 523
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 136/269 (50%), Gaps = 13/269 (4%)
Query: 5 LKQTQGPYTS-LSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDL 63
LK +G S LS CS L + + ++ FV +++G N +D++
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG--------NALVDMFCKC 195
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
G ++ A VFD + KN W + G + +G++ A LF+ PV+DVV W +M++GY
Sbjct: 196 GCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYV 255
Query: 124 SNGFSSDALELFVEMQGAGMRPSSFTF-SILTSLVSSPC--HAKQVHGRIIRSGMDLSNV 180
+ALELF MQ AG+RP +F S+LT + K +HG I + + + V
Sbjct: 256 QFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV 315
Query: 181 VLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDA 240
V G +L+ MY K G ++ + V +K+ D SW SL++ G AL +Y+M +
Sbjct: 316 V-GTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENV 374
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+ D T +++ C++ + +G+++F
Sbjct: 375 GVRLDAITFVAVLTACNHGGFVAEGRKIF 403
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 181/414 (43%), Gaps = 79/414 (19%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
VH + +K GL +Y+ N + +Y+ LG I KVFD++ ++ SW
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSW------------ 115
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF---SIL 153
N +IS Y NG DA+ +F M + S+ F +I+
Sbjct: 116 -------------------NGLISSYVGNGRFEDAIGVFKRMS----QESNLKFDEGTIV 152
Query: 154 TSLVSSPCHA---KQVHGRIIR---SGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
++L S C A ++ RI R + ++S V +GN+L+ M+ K G +D + +V +M+
Sbjct: 153 STL--SACSALKNLEIGERIYRFVVTEFEMS-VRIGNALVDMFCKCGCLDKARAVFDSMR 209
Query: 208 KIDIISWNSL--------------------------MWACHRAGHHEL-----ALAHFYK 236
++ W S+ +W G+ + AL F
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 237 MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNR 296
M+ A + PD F +L++ C+ L++GK + + + + +V +A +D+++KC
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 297 LEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
+E ++ +F E DTA TS+I A + + AL L+ +R +L++
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 357 FSIFLPVEVGIQI-HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
+ V G +I H++ + + + S L+ + + G++D+A + ++ +
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 147/328 (44%), Gaps = 34/328 (10%)
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
++ +N ++ + LA F ++R L PD FT ++ LR + +G++V
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGED 330
+ K G ++S VS++ + +++ ++E + ++F E + D +ISSY + ED
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 331 ALHLFVLTLRE-NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
A+ +F +E N++ E + LS+ S +E+G +I+ V FE + + LV
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALV 189
Query: 390 HMYAKFGI-------------------------------IDDALHIFNETKIKDLVSWNT 418
M+ K G ID+A +F + +KD+V W
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 419 IMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEF 478
+M G + L+LF+ + G+ PD L ++L C +++G K E
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINEN 308
Query: 479 GVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
V + T +V+M +K G ++ A+++
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIETALEV 336
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 265/526 (50%), Gaps = 6/526 (1%)
Query: 78 HKNS-TSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFV 136
H+N+ WN L K G+L +A +LFD MP+RDV+S N + G+ N + L
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 137 EMQGAGMRPSSFTFSILTSLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
M G+G + T +I+ S+ +P K +H I SG D + +GN LI Y K
Sbjct: 146 RMLGSGGFDHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYD-KEISVGNKLITSYFKC 203
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLM 253
G V M ++I+ +++ HE L F MR + P+ T + +
Sbjct: 204 GCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSAL 263
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
+ CS + + +G+Q+ A +K G + SA +D++SKC +ED+ +F D
Sbjct: 264 AACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
T ++ A + E+A+ F+ L+ + +VS +L I + +G Q+H+LV
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
K F + + + L++MY+K G + D+ +F ++ VSWN+++ A +G L
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
L++E+ + P +T ++L AC++ +D+G ++ M+ G++P EHYT +++M
Sbjct: 444 KLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDM 503
Query: 494 LSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPY 553
L +AG+LKEA ++++P +W+ +L C HGD +V E A+++ + P + +
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAH 563
Query: 554 LVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
+++A Y G+W+ + K M+ + G S +++ ++F
Sbjct: 564 ILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSF 609
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
+++ +++ S++Y S L SQ+ V +I HA K G+ + + + +D+Y
Sbjct: 243 LFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMY 301
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
S G I DA +F+ + + S + L GL
Sbjct: 302 SKCGSIEDAWTIFESTTEVDEVSMTVILVGL----------------------------- 332
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLV---SSPCHAKQVHGRIIRSGMDL 177
A NG +A++ F+ M AG+ + S + + +S KQ+H +I+
Sbjct: 333 --AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS- 389
Query: 178 SNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM 237
N + N LI MY K G + S +V M K + +SWNS++ A R GH AL + +M
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Query: 238 RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
E+ P T +L+ CS++ +DKG+++
Sbjct: 450 TTLEVKPTDVTFLSLLHACSHVGLIDKGRELL 481
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 245/468 (52%), Gaps = 5/468 (1%)
Query: 166 VHGRIIRSGMDLS----NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
+ GRI+ + + S ++V+GN+L+ MY K G ++ + V M + D ++W +L+
Sbjct: 77 IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGY 136
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
+ AL F +M P++FT S+++ + R G Q+ FC K GF N
Sbjct: 137 SQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNV 196
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
V SA +DL+++ ++D+ +F + + ++I+ +A E AL LF LR+
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD 256
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
RP+ + + L + S +E G +HA + K G + A +TL+ MYAK G I DA
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 402 LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
IF+ +D+VSWN+++ A +G + F+E+ R G+ P+ I+ +VL AC++
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 462 SFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRL 521
+DEG + M+ + G+ P HY VV++L +AG L A+ +E MP T +W+
Sbjct: 377 GLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKA 435
Query: 522 ILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCT 581
+L+ C +H + ++ A+ + E +P P P+++L Y GRW RVRK M++
Sbjct: 436 LLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGV 495
Query: 582 KEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
K+ CSW ++N ++ F +N +H ++ + +++ GYV
Sbjct: 496 KKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 191/408 (46%), Gaps = 36/408 (8%)
Query: 17 YCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDI 76
+ +TLL C K + +IVHAH L+ +GN L++Y+ G + +A KV
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV---- 117
Query: 77 SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFV 136
F+ MP RD V+W ++ISGY+ + DAL F
Sbjct: 118 ---------------------------FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 137 EMQGAGMRPSSFTFSILTSLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
+M G P+ FT S + ++ C Q+HG ++ G D SNV +G++L+ +Y +
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD-SNVHVGSALLDLYTRY 209
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLM 253
GL+D + V ++ + +SWN+L+ R E AL F M P F+ ++L
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
CS+ L++GK V A+ K G + + +D+++K + D+ ++F + D
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
S++++YA H G++A+ F R IRP E +L++ S ++ G + L+
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM 389
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIM 420
K G +A T+V + + G ++ AL E I+ + W ++
Sbjct: 390 KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 153/290 (52%), Gaps = 10/290 (3%)
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
D+ +TL+ C+ + L +G+ V A + F ++ ++ + +++++KC LE++ ++F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 305 TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
+ + D T++IS Y+ HD DAL F LR P E+ +S ++ + +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA 424
G Q+H K GF+S+ + S L+ +Y ++G++DDA +F+ + ++ VSWN ++ G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 425 YNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGE 484
L+LF+ ++R+G P + A++ AC+ F+++G + M +K GE
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM-----IKSGE 293
Query: 485 EHYTY----VVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
+ + +++M +K+G + +A I + + + W +L+ HG
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHG 342
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 33/144 (22%)
Query: 13 TSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKV 72
+ SY S L C S + K VHA+ +K G + GN LD+Y+ G I+DA K+
Sbjct: 261 SHFSYAS-LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 73 FDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL 132
FD ++ ++ SW NS+++ YA +GF +A+
Sbjct: 320 FDRLAKRDVVSW-------------------------------NSLLTAYAQHGFGKEAV 348
Query: 133 ELFVEMQGAGMRPSSFTF-SILTS 155
F EM+ G+RP+ +F S+LT+
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTA 372
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 171/630 (27%), Positives = 304/630 (48%), Gaps = 76/630 (12%)
Query: 11 PYTSLSYCSTL--LDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLD---LYSDLGH 65
PY S+ +L L +C K++ ++I+HA +K+GL+ Y ++ ++ L
Sbjct: 27 PYDSIRNHPSLSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEG 83
Query: 66 INDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASN 125
+ A+ VF I N ++ WN+M G+A +
Sbjct: 84 LPYAISVFKTIQEPN-------------------------------LLIWNTMFRGHALS 112
Query: 126 GFSSDALELFVEMQGAGMRPSSFTFS-ILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVL 182
AL+L+V M G+ P+S+TF +L S S +Q+HG +++ G DL ++ +
Sbjct: 113 SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDL-DLYV 171
Query: 183 GNSLIAMYGKVGLVDYSFSV------------------------ILTMKKI-------DI 211
SLI+MY + G ++ + V I +K+ D+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
+SWN+++ G+++ AL F M + PD+ T T++S C+ ++ G+QV +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
GF N + +A IDL+SKC LE + LF D ++I Y +L ++A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL--GFESDAVLASTLV 389
L LF LR P + + +L + + +++G IH + K G + + L ++L+
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MYAK G I+ A +FN K L SWN ++ G A +G+ + DLF + + G+ PD I
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
T +L AC++ +D G IF +M ++ + P EHY ++++L +G+ KEA +++
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESL 569
M +W +L C +HG++++ E+ A+ +++ EP+ P Y++L+ Y GRW +
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591
Query: 570 VRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
+ R + K K+ GCS + + V+ F
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEF 621
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 264/500 (52%), Gaps = 10/500 (2%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF- 150
LK G + +A +LFD + RDVVSW +MIS ++ G+ DAL LF EM ++ + FT+
Sbjct: 58 LKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYG 117
Query: 151 SILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
S+L S C Q+HG + G N+++ ++L+++Y + G ++ + +MK+
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSV-EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D++SWN+++ + + + F M PD FT +L+ ++ L+ ++
Sbjct: 177 RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT-HDL 327
K+GF +S + + ++ + KC L ++ +L + D CT++I+ ++ ++
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG-FESDAVLAS 386
DA +F +R + E +VS +L + V +G QIH K D L +
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
+L+ MYAK G I+DA+ F E K KD+ SW +++ G +G +DL+ + E + P
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 447 DRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
+ +T ++L AC++ + G KI+ +M + G++ EEH + +++ML+++G L+EA +
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476
Query: 507 VETMPYTITL--DMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMG 564
+ + ++L W L C HG++Q+ + A +++ EP+ P Y+ LA Y G
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANG 536
Query: 565 RWESLVRVRKDMEQ--KCTK 582
W++ + RK M++ C K
Sbjct: 537 AWDNALNTRKLMKESGSCNK 556
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 194/408 (47%), Gaps = 12/408 (2%)
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG 225
+HG I +G SN+ L + LI +Y K G V ++ + + K D++SW +++ R G
Sbjct: 34 IHGNSITNGF-CSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 226 HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
+H AL F +M ++ +QFT +++ C +L L +G Q+ K N IV S
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP 345
A + L+++C ++E++ F D +MI Y + + + LF L L E +P
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
+ LL + + +E+ ++H L KLGF + L +LV+ Y K G + +A +
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 406 NETKIKDLVSWNTIMMGLA-YNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFV 464
TK +DL+S ++ G + N S D+FK++IR D + ++++L C + V
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 465 DEGIKI----FFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWR 520
G +I S + F V G +++M +K+G +++A+ E M + W
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNS----LIDMYAKSGEIEDAVLAFEEMKEK-DVRSWT 387
Query: 521 LILSVCVIHGDLQ-VIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
+++ HG+ + I+ + ER +L L A G+ E
Sbjct: 388 SLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTE 435
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 182/414 (43%), Gaps = 47/414 (11%)
Query: 57 LDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWN 116
L LY+ G + +A FD + ++ SWN
Sbjct: 155 LSLYARCGKMEEARLQFDSMKERDLVSWN------------------------------- 183
Query: 117 SMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSLVSSPCH--AKQVHGRIIRS 173
+MI GY +N + + LF M G +P FTF S+L + + C ++HG I+
Sbjct: 184 AMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKL 243
Query: 174 GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH-HELALA 232
G S+ ++ SL+ Y K G + ++ + KK D++S +L+ + + A
Sbjct: 244 GFGRSSALI-RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFD 302
Query: 233 HFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV-YNSIVSSAAIDLF 291
F M + D+ S+++ +C+ + + G+Q+ F K + ++ + ++ ID++
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMY 362
Query: 292 SKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVS 351
+K +ED+V F E D TS+I+ Y H E A+ L+ E I+P +
Sbjct: 363 AKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFL 422
Query: 352 CLLSSFSIFLPVEVGIQIH-ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK- 409
LLS+ S E+G +I+ ++ K G E+ S ++ M A+ G +++A + +
Sbjct: 423 SLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEG 482
Query: 410 IKDLVS--WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR----ITLAAVLLA 457
I L S W + +G V ++ +L+ M P + I LA+V A
Sbjct: 483 IVSLSSSTWGAFLDACRRHGNVQLSKVAATQLL--SMEPRKPVNYINLASVYAA 534
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 265/557 (47%), Gaps = 66/557 (11%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +H L+LG +L N L++Y+ +N A +F +
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE------------------- 309
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
MP +VVSWN MI G+ S ++E M+ +G +P+ T
Sbjct: 310 ------------MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT----- 352
Query: 155 SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISW 214
V G RSG +V G + + ++ + + +W
Sbjct: 353 --------CISVLGACFRSG----DVETGRRIFS----------------SIPQPSVSAW 384
Query: 215 NSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
N+++ H+E A+++F +M+ L PD+ T S ++S C+ LR L+ GKQ+ +
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ-DRWDTALCTSMISSYATHDLGEDALH 333
NS + S I ++S+C ++E S +F + + D A SMIS + + L AL
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 334 LFVLTLRENIR-PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
LF + + P E + +LSS S + G Q H LV K G+ SD+ + + L MY
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMY 564
Query: 393 AKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLA 452
K G ID A F+ K+ V WN ++ G +NG+ + L++++I G PD IT
Sbjct: 565 CKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 453 AVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPY 512
+VL AC++ V+ G++I SM+ G++P +HY +V+ L +AG L++A + E PY
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPY 684
Query: 513 TITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRV 572
+ +W ++LS C +HGD+ + VA+++M +PQ+ Y++L+ Y + +W+ +
Sbjct: 685 KSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL 744
Query: 573 RKDMEQKCTKEFIGCSW 589
+ M + + G SW
Sbjct: 745 QGLMNKNRVHKTPGQSW 761
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 215/449 (47%), Gaps = 49/449 (10%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K++H +++G+ + TYL NR LDLY + G + A KVFD++S ++ SWN L K
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
G LG AC++FDGMP RDVVSWN+MIS GF AL ++ M G PS FT + +
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 155 SLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG-LVDYSFSVILTMKKID 210
S S + HG +++G+D N+ +GN+L++MY K G +VDY V ++ + +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLD-KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV------CSNLRDL-- 262
+S+ +++ R A+ F M + + D S ++S+ C +L ++
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 263 -DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISS 321
+ GKQ+ ++GF + ++++ +++++K + + +F E + MI
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 322 YATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESD 381
+ + ++ F+ +R++ GF+ +
Sbjct: 325 FGQEYRSDKSVE-FLTRMRDS----------------------------------GFQPN 349
Query: 382 AVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
V +++ + G ++ IF+ + +WN ++ G + + F+++
Sbjct: 350 EVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 442 EGMAPDRITLAAVLLACNYGSFVDEGIKI 470
+ + PD+ TL+ +L +C F++ G +I
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 163/353 (46%), Gaps = 42/353 (11%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY--------------SFSVILT--- 205
K +HG I+R GM S+ L N L+ +Y + G DY S++ LT
Sbjct: 25 GKVIHGFIVRMGMK-SDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 206 --------------MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
M + D++SWN+++ R G E AL + +M LP +FT ++
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED-SVRLFTEQDRW 310
++S CS + D G + K G N V +A + +++KC + D VR+F +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS---------SFSIFL 361
+ T++I A + +A+ +F L + ++ +S +LS S S
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMM 421
E+G QIH L +LGF D L ++L+ +YAK ++ A IF E ++VSWN +++
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSM 474
G + +++ + G P+ +T +VL AC V+ G +IF S+
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 72/212 (33%)
Query: 366 GIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIM----- 420
G IH + ++G +SD L + L+ +Y + G D A +F+E ++D+ SWN +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 421 ---MG--------------LAYNGKVSV---------TLDLFKELIREGMAPDRITLAAV 454
+G +++N +SV L ++K ++ +G P R TLA+V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 455 LLACNY------------------------------------GSFVDEGIKIFFSMETEF 478
L AC+ G VD G+++F S+
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS--- 201
Query: 479 GVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+P E YT V+ L++ + EA+ + M
Sbjct: 202 --QPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 265/536 (49%), Gaps = 21/536 (3%)
Query: 68 DALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGF 127
DA K+FD++ +N SWN + G +K+G++ A ++FD MP R+VVSW +++ GY NG
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 128 SSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLI 187
A LF +M P S L+ + + + + + S+I
Sbjct: 126 VDVAESLFWKM------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMI 179
Query: 188 AMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQF 247
K G VD + + M + +I+W +++ + + A F +++P++
Sbjct: 180 HGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKT 233
Query: 248 T---CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
S LM N R D + F+V V I +A I + + + R+F
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEE-----LFEVMPVKPVIACNAMISGLGQKGEIAKARRVF 288
Query: 305 TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
+ A ++I + + +AL LF+L ++ +RPT + +LS + +
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA 424
G Q+HA + + F+ D +AS L+ MY K G + + IF+ KD++ WN+I+ G A
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 425 YNGKVSVTLDLFKELIREG-MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPG 483
+G L +F E+ G P+ +T A L AC+Y V+EG+KI+ SME+ FGVKP
Sbjct: 409 SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPI 468
Query: 484 EEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIM 543
HY +V+ML +AG EA++++++M +W +L C H L V E AK+++
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLI 528
Query: 544 EREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
E EP+ Y++L+ Y GRW + +RK M+ + ++ GCSW ++N V+ F
Sbjct: 529 EIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAF 584
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 9/380 (2%)
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
G I+DA K+++ I K++ + + GL K G++ A ++FD M R V++W +M++GY
Sbjct: 155 GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYG 214
Query: 124 SNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLG 183
N DA ++F M P S + L+ + + + M + V+
Sbjct: 215 QNNRVDDARKIFDVM------PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL 243
N++I+ G+ G + + V +MK+ + SW +++ R G AL F M+ +
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
P T +++SVC++L L GKQV A + F + V+S + ++ KC L S +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 304 FTEQDRWDTALCTSMISSYATHDLGEDALHLFV-LTLRENIRPTEYMVSCLLSSFSIFLP 362
F D + S+IS YA+H LGE+AL +F + L + +P E LS+ S
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 363 VEVGIQIH-ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
VE G++I+ ++ G + + +V M + G ++A+ + + ++ D W +++
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 421 MGLAYNGKVSVTLDLFKELI 440
+ ++ V K+LI
Sbjct: 509 GACRTHSQLDVAEFCAKKLI 528
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 46/307 (14%)
Query: 60 YSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMI 119
Y ++DA K+FD + K SW L G +++G++ +A +LF+ MPV+ V++ N+MI
Sbjct: 213 YGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMI 272
Query: 120 SG-------------------------------YASNGFSSDALELFVEMQGAGMRPSSF 148
SG + NGF +AL+LF+ MQ G+RP
Sbjct: 273 SGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP--- 329
Query: 149 TFSILTSLVS------SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSV 202
TF L S++S S H KQVH +++R D+ +V + + L+ MY K G + S +
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV-DVYVASVLMTMYIKCGELVKSKLI 388
Query: 203 ILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMR-DAELLPDQFTCSTLMSVCSNLRD 261
DII WNS++ G E AL F +M P++ T +S CS
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAA--IDLFSKCNRLEDSVRLFTEQD-RWDTALCTSM 318
+++G +++ V F I + A +D+ + R +++ + D A+ S+
Sbjct: 449 VEEGLKIYESMESV-FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 319 ISSYATH 325
+ + TH
Sbjct: 508 LGACRTH 514
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 190/456 (41%), Gaps = 75/456 (16%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N+ + L + G++ A +LFD + + SWNSM++GY +N DA +LF EM
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 145 PSSFTFSILTSLVSSPCHAKQV-HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI 203
P S LVS ++ R + M NVV +L+ Y G VD + S+
Sbjct: 75 PDRNIIS-WNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLF 133
Query: 204 LTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQ---FTCSTLMSVCSNLR 260
M + + +SW ++ + G + A + E++PD+ S + +C R
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDGRIDDACKLY------EMIPDKDNIARTSMIHGLCKEGR 187
Query: 261 DLDKGKQVF-AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
+D+ +++F + + ++V+ + + NR++D+ ++F TSM+
Sbjct: 188 -VDEAREIFDEMSERSVITWTTMVTG-----YGQNNRVDDARKIFDVMPEKTEVSWTSML 241
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
Y + EDA LF + +PV+ I +A++ LG
Sbjct: 242 MGYVQNGRIEDAEELFEV-----------------------MPVKPVIACNAMISGLG-- 276
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
+ G I A +F+ K ++ SW T++ NG LDLF +
Sbjct: 277 --------------QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 440 IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSM-ETEFGVKPGEEHYTYVVEMLS--- 495
++G+ P TL ++L C + + G ++ + +F V YV +L
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD------VYVASVLMTMY 376
Query: 496 -KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
K G L ++ I + P + + MW I+S HG
Sbjct: 377 IKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHG 411
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 28/270 (10%)
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
++ I S+ ++ ++ +LF D + SM++ Y + + DA LF NI
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
+VS + + I + ++ L+P E + V + LV Y G +D A
Sbjct: 80 ISWNGLVSGYMKNGEI----DEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDVAES 131
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA---CNY 460
+F + K+ VSW +++G +G++ L++ M PD+ +A + C
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYE------MIPDKDNIARTSMIHGLCKE 185
Query: 461 GSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWR 520
G VDE +IF M + +T +V + + +A I + MP + W
Sbjct: 186 GR-VDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WT 238
Query: 521 LILSVCVIHGDLQVIETVAKEIMEREPQAP 550
+L V +G ++ A+E+ E P P
Sbjct: 239 SMLMGYVQNGRIE----DAEELFEVMPVKP 264
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 256/499 (51%), Gaps = 11/499 (2%)
Query: 99 NACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS 158
+A +LFD P R V WNS+I YA + L LF ++ + RP +FT++ L S
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 159 SPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN 215
K +HG I SG+ + G++++ Y K GL+ + + ++ D+ WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQIC-GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWN 176
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD---LDKGKQVFAFC 272
++ G + + F M+ P+ C T++++ S L D L V AFC
Sbjct: 177 VMILGYGCCGFWDKGINLFNLMQHRGHQPN---CYTMVALTSGLIDPSLLLVAWSVHAFC 233
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
K+ +S V A ++++S+C + + +F D C+S+I+ Y+ ++AL
Sbjct: 234 LKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEAL 293
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
HLF +P +V+ +L S + G ++H+ V +LG E D + S L+ MY
Sbjct: 294 HLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMY 353
Query: 393 AKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLA 452
+K G++ A+ +F K++VS+N++++GL +G S + F E++ G+ PD IT +
Sbjct: 354 SKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFS 413
Query: 453 AVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPY 512
A+L C + +++G +IF M++EFG++P EHY Y+V+++ AG L+EA + V ++
Sbjct: 414 ALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQK 473
Query: 513 TITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLV-LAQAYQMMGRWESLVR 571
I + +LS C +H + + E VA+ I + + Y V L+ Y GRW+ + R
Sbjct: 474 PIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVER 533
Query: 572 VRKDMEQKCTKEFIGCSWF 590
+R + + + G SWF
Sbjct: 534 LRDGISESYGGKLPGISWF 552
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 4/272 (1%)
Query: 88 LKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSS 147
+K K+G + A +LF +P D+ WN MI GY GF + LF MQ G +P+
Sbjct: 148 VKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNC 207
Query: 148 FTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
+T LTS + P A VH ++ +D S+ +G +L+ MY + + + SV
Sbjct: 208 YTMVALTSGLIDPSLLLVAWSVHAFCLKINLD-SHSYVGCALVNMYSRCMCIASACSVFN 266
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
++ + D+++ +SL+ R G+H+ AL F ++R + PD + ++ C+ L D
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVS 326
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
GK+V ++ ++G + V SA ID++SKC L+ ++ LF + S+I
Sbjct: 327 GKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGL 386
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
H A F L + P E S LL +
Sbjct: 387 HGFASTAFEKFTEILEMGLIPDEITFSALLCT 418
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G L A LF G+P +++VS+NS+I G +GF+S A E F E+ G+ P TFS
Sbjct: 355 KCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFS- 413
Query: 153 LTSLVSSPCHAKQVH-GRIIRSGMDLSNVVLGNS-----LIAMYGKVGLVDYSFSVILTM 206
+L+ + CH+ ++ G+ I M + + ++ + G G ++ +F ++++
Sbjct: 414 --ALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSL 471
Query: 207 KK-IDIISWNSLMWAC 221
+K ID +L+ C
Sbjct: 472 QKPIDSGILGALLSCC 487
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 368 QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNG 427
++H+ V K D A+ L YA + A +F+ + + WN+I+ A
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 428 KVSVTLDLFKELIREGMAPDRITLAAVLLACNYG-SFVDEGIKIFFSMETEFGVKPGEEH 486
+ + L LF +++R PD T A LA + SF +G++ + G+ +
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYAC--LARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 487 YTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
+ +V+ SKAG++ EA + ++P L +W +++
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMI 179
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 275/548 (50%), Gaps = 44/548 (8%)
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
++S I L +S L + ++ G+ ++ SWN I G++ + ++ L+ +M
Sbjct: 87 ASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLR 146
Query: 141 AGM---RPSSFTFSILTSL-----VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
G RP FT+ +L + +SS H + G +++ ++L + V N+ I M+
Sbjct: 147 HGCCESRPDHFTYPVLFKVCADLRLSSLGH--MILGHVLKLRLELVSHV-HNASIHMFAS 203
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQFTCST 251
G ++ + V D++SWN L+ + G E A+ + YK+ ++E + PD T
Sbjct: 204 CGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI-YVYKLMESEGVKPDDVTMIG 262
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
L+S CS L DL++GK+ + + + G + +A +D+FSKC + ++ R+F ++
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
Query: 312 TALCTSMISSYATHDL-------------------------------GEDALHLFVLTLR 340
T+MIS YA L G+DAL LF
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
N +P E + LS+ S ++VGI IH + K + L ++LV MYAK G I +
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 401 ALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY 460
AL +F+ + ++ +++ I+ GLA +G S + F E+I G+APD IT +L AC +
Sbjct: 443 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCH 502
Query: 461 GSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWR 520
G + G F M++ F + P +HY+ +V++L +AG+L+EA ++E+MP +W
Sbjct: 503 GGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWG 562
Query: 521 LILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKC 580
+L C +HG++++ E AK+++E +P Y++L Y WE R R+ M ++
Sbjct: 563 ALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERG 622
Query: 581 TKEFIGCS 588
++ GCS
Sbjct: 623 VEKIPGCS 630
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 188/432 (43%), Gaps = 43/432 (9%)
Query: 48 TYTYLGNRCLDLY-SDLGH--INDALKV-FDDISHKNSTSWNICLKGLLKSGQLGNACQL 103
TY L C DL S LGH + LK+ + +SH ++ S ++ G + NA ++
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHM----FASCGDMENARKV 213
Query: 104 FDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSS---------------- 147
FD PVRD+VSWN +I+GY G + A+ ++ M+ G++P
Sbjct: 214 FDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDL 273
Query: 148 ----------------FTFSILTSLVSSPCHAKQVH-GRIIRSGMDLSNVVLGNSLIAMY 190
T ++ +L+ +H R I ++ +V ++I+ Y
Sbjct: 274 NRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGY 333
Query: 191 GKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCS 250
+ GL+D S + M++ D++ WN+++ +A + ALA F +M+ + PD+ T
Sbjct: 334 ARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMI 393
Query: 251 TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
+S CS L LD G + + K N + ++ +D+++KC + +++ +F
Sbjct: 394 HCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR 453
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-I 369
++ T++I A H A+ F + I P E LLS+ ++ G
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGK 428
+ + S +V + + G++++A + ++ D W ++ G +G
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
Query: 429 VSVTLDLFKELI 440
V + K+L+
Sbjct: 574 VELGEKAAKKLL 585
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 152/326 (46%), Gaps = 18/326 (5%)
Query: 15 LSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFD 74
+S CS L D ++ +VK + GL L N +D++S G I++A ++FD
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVK-------ENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 75 DISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALEL 134
++ + SW + G + G L + +LFD M +DVV WN+MI G DAL L
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 135 FVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYG 191
F EMQ + +P T S S +H I + + L NV LG SL+ MY
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL-NVALGTSLVDMYA 435
Query: 192 KVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
K G + + SV ++ + +++ +++ G A+++F +M DA + PD+ T
Sbjct: 436 KCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSVRLFTEQD- 308
L+S C + + G+ F+ K F N + S +DL + LE++ RL
Sbjct: 496 LLSACCHGGMIQTGRDYFSQ-MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPM 554
Query: 309 RWDTALCTSMISSYATH---DLGEDA 331
D A+ +++ H +LGE A
Sbjct: 555 EADAAVWGALLFGCRMHGNVELGEKA 580
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 181/406 (44%), Gaps = 39/406 (9%)
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAM--YGKVGLVDYSFSVILTMKKIDIISWNSLMW 219
H KQ+ ++I +G+ L + + LIA + +DYS ++ ++ +I SWN +
Sbjct: 68 HLKQIQAQMIINGLIL-DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIR 126
Query: 220 ACHRAGHHELALAHFYKMRD---AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
+ + + + + +M E PD FT L VC++LR G + K+
Sbjct: 127 GFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLR 186
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFV 336
S V +A+I +F+ C +E++ ++F E D +I+ Y E A++++
Sbjct: 187 LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFG 396
L E ++P + + L+SS S+ + G + + V + G L + L+ M++K G
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 397 IIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVT------------------------ 432
I +A IF+ + + +VSW T++ G A G + V+
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 433 -------LDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEE 485
L LF+E+ PD IT+ L AC+ +D GI I +E ++ +
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE-KYSLSLNVA 425
Query: 486 HYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGD 531
T +V+M +K G + EA+ + + +L + I+ +HGD
Sbjct: 426 LGTSLVDMYAKCGNISEALSVFHGIQTRNSL-TYTAIIGGLALHGD 470
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/605 (26%), Positives = 283/605 (46%), Gaps = 40/605 (6%)
Query: 2 YTFLKQTQGPYTSLSYCS--TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRC-LD 58
+ FL++ S+S S L + C +S++ +++H +++G+ + L C L
Sbjct: 68 FEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNCVLQ 126
Query: 59 LYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSM 118
+Y + + DA K+FD++S N+ VS +M
Sbjct: 127 MYCECRSLEDADKLFDEMSELNA-------------------------------VSRTTM 155
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRP-SSFTFSILTSLVSSPC--HAKQVHGRIIRSGM 175
IS YA G A+ LF M +G +P SS ++L SLV+ +Q+H +IR+G+
Sbjct: 156 ISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL 215
Query: 176 DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFY 235
SN + ++ MY K G + + V M ++ LM +AG AL F
Sbjct: 216 -CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274
Query: 236 KMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
+ + D F S ++ C++L +L+ GKQ+ A K+G V + +D + KC+
Sbjct: 275 DLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS 334
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP-TEYMVSCLL 354
E + R F E + +++IS Y E+A+ F +N + + +
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 355 SSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLV 414
+ S+ +G Q+HA K S L+ MY+K G +DDA +F D+V
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIV 454
Query: 415 SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSM 474
+W + G AY G S L LF++++ GM P+ +T AVL AC++ V++G +M
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Query: 475 ETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQV 534
++ V P +HY ++++ +++G+L EA+ ++ MP+ W+ LS C H +L++
Sbjct: 515 LRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLEL 574
Query: 535 IETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKN 594
E +E+ + +P+ Y++ Y G+WE + K M ++ K+ + CSW K
Sbjct: 575 GEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKG 634
Query: 595 HVYTF 599
++ F
Sbjct: 635 KIHRF 639
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 287/587 (48%), Gaps = 57/587 (9%)
Query: 62 DLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISG 121
D G DA+++FD++ +N SWN + GL+++G + A Q+FD MP RDVVSWN+MI G
Sbjct: 150 DDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKG 209
Query: 122 YASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVH-GRIIRSGMDLSNV 180
Y N +A LF +M S TS+V C V + M N+
Sbjct: 210 YIENDGMEEAKLLFGDM-------SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
Query: 181 VLGNSLIAMYGKVGLVDYSFSVILTMKK-IDIISWN-----SLMWACHRAG--------- 225
V ++I+ + L + + L MKK +D +S N SL +AC G
Sbjct: 263 VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQ 322
Query: 226 -HHEL----------------ALAHFYK-----MRDAELLPDQF---TCSTLMSVCSNLR 260
H ++ +L H Y LL + F +C+ +++
Sbjct: 323 LHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNG 382
Query: 261 DLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS 320
DL++ + +F +V +++ + ++ ID + + + + LF + D T MIS
Sbjct: 383 DLERAETLFE---RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMIS 439
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG--F 378
++L +A L +R ++P S LLSS ++ G IH ++ K +
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 499
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
+ D +L ++LV MYAK G I+DA IF + KD VSWN+++MGL+++G L+LFKE
Sbjct: 500 DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKE 559
Query: 439 LIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG 498
++ G P+ +T VL AC++ + G+++F +M+ + ++PG +HY ++++L +AG
Sbjct: 560 MLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAG 619
Query: 499 MLKEAIDIVETMPYTITLDMWRLILSVCVIH---GDLQ-VIETVAKEIMEREPQAPFPYL 554
LKEA + + +P+T ++ +L +C ++ D + + E A ++E +P ++
Sbjct: 620 KLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHV 679
Query: 555 VLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQS 601
L Y +GR + +RK+M K K+ GCSW + F S
Sbjct: 680 ALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLS 726
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 61/388 (15%)
Query: 64 GHINDALKVFDDISHKNSTS----WNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMI 119
G + A + D I + S + W L K+G L A LF+ MP R++V+ N+M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 120 SGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSN 179
+GY ++A LF EM S+T +LT+L V + M N
Sbjct: 116 TGYVKCRRMNEAWTLFREMP---KNVVSWTV-MLTALCDDGRSEDAVE---LFDEMPERN 168
Query: 180 VVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRD 239
VV N+L+ + G ++ + V M D++SWN+++ G+ E M +
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI-----KGYIEND-----GMEE 218
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 299
A+LL + +++ S V+ +C + + +
Sbjct: 219 AKLLFGDMSEKNVVTWTS---------MVYGYC--------------------RYGDVRE 249
Query: 300 SVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPT----EYMVSCLLS 355
+ RLF E + T+MIS +A ++L +AL LF L +++++ E ++S +
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLF-LEMKKDVDAVSPNGETLISLAYA 308
Query: 356 SFSIFLPV-EVGIQIHALVPKLGFES---DAVLASTLVHMYAKFGIIDDALHIFNETKIK 411
+ + +G Q+HA V G+E+ D LA +LVHMYA G+I A + NE+
Sbjct: 309 CGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES--F 366
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
DL S N I+ NG + LF+ +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERV 394
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
F+V N + +A + + KC R+ ++ LF E + + T M+++ EDA+
Sbjct: 100 FEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAV 158
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSI--------FLPVEVGIQIHALV----------- 373
LF N+ +V+ L+ + + +P + +A++
Sbjct: 159 ELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEE 218
Query: 374 PKLGF----ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
KL F E + V +++V+ Y ++G + +A +F E +++VSW ++ G A+N
Sbjct: 219 AKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 278
Query: 430 SVTLDLFKELIR--EGMAPDRITLAAVLLAC 458
L LF E+ + + ++P+ TL ++ AC
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYAC 309
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/585 (27%), Positives = 273/585 (46%), Gaps = 46/585 (7%)
Query: 25 CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW 84
C V ++VHAH +K + ++G +D++
Sbjct: 62 CARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMF------------------------ 97
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
+K + A ++F+ MP RD +WN+M+SG+ +G + A LF EM+ +
Sbjct: 98 -------VKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 145 PSSFTFSILTSLVSSPCHAKQV------HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
P S T + +L+ S K + H IR G+D+ V + N+ I+ YGK G +D
Sbjct: 151 PDSVT---VMTLIQSASFEKSLKLLEAMHAVGIRLGVDV-QVTVANTWISTYGKCGDLDS 206
Query: 199 SFSVILTMKKID--IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ V + + D ++SWNS+ A G A + M E PD T L + C
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
N L +G+ + + +G + + I ++SK + LF T
Sbjct: 267 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWT 326
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
MIS YA ++AL LF ++ +P + L+S F +E G I A
Sbjct: 327 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIY 386
Query: 377 GFESDAVL-ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
G + D V+ + L+ MY+K G I +A IF+ T K +V+W T++ G A NG L L
Sbjct: 387 GCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKL 446
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
F ++I P+ IT AVL AC + +++G + F M+ + + PG +HY+ +V++L
Sbjct: 447 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLG 506
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLV 555
+ G L+EA++++ M +W +L+ C IH ++++ E A+ + EPQ PY+
Sbjct: 507 RKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 566
Query: 556 LAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGM--KNHVYT 598
+A Y G W+ R+R M+Q+ K++ G S + KNH +T
Sbjct: 567 MANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 214/466 (45%), Gaps = 16/466 (3%)
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS----LVSSPCHAKQVH 167
V +WN I + ++L LF EM+ G P++FTF + L C + VH
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGC-CEMVH 75
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHH 227
+I+S S+V +G + + M+ K VDY+ V M + D +WN+++ ++GH
Sbjct: 76 AHLIKSPF-WSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 228 ELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAA 287
+ A + F +MR E+ PD T TL+ S + L + + A ++G V++
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 288 IDLFSKCNRLEDSVRLFTEQDRWDTALCT--SMISSYATHDLGEDALHLFVLTLRENIRP 345
I + KC L+ + +F DR D + + SM +Y+ DA L+ L LRE +P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
L +S + G IH+ LG + D +T + MY+K A +F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 406 NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC-NYGSFV 464
+ + VSW ++ G A G + L LF +I+ G PD +TL +++ C +GS
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL- 373
Query: 465 DEGIKIFFSMETEFGVKPGEEHY-TYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
E K + +G K +++M SK G + EA DI + P T+ W ++
Sbjct: 374 -ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVTWTTMI 431
Query: 524 SVCVIHGD-LQVIETVAKEI-MEREPQAPFPYLVLAQAYQMMGRWE 567
+ ++G L+ ++ +K I ++ +P +L + QA G E
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNH-ITFLAVLQACAHSGSLE 476
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 181/452 (40%), Gaps = 50/452 (11%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
TL+ +KS+ ++ +HA ++LG++ + N + Y G ++ A VF+ I
Sbjct: 158 TLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG 217
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+ R VVSWNSM Y+ G + DA L+ M
Sbjct: 218 D-----------------------------RTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 140 GAGMRPSSFTFSILTSLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+P TF L + +P + +H I G D ++ N+ I+MY K
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD-QDIEAINTFISMYSKSEDT 307
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ + M +SW ++ G + ALA F+ M + PD T +L+S C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 257 SNLRDLDKGKQVFAFCFKVGFVY-NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
L+ GK + A G N ++ +A ID++SKC + ++ +F
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG-------IQ 368
T+MI+ YA + + +AL LF + + +P +L + + +E G Q
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNG 427
++ + P L S +V + + G +++AL + K D W ++ +
Sbjct: 488 VYNISPGLDH------YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHR 541
Query: 428 KVSVTLDLFKEL--IREGMAPDRITLAAVLLA 457
V + + L + MA + +A + A
Sbjct: 542 NVKIAEQAAESLFNLEPQMAAPYVEMANIYAA 573
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 118/290 (40%), Gaps = 29/290 (10%)
Query: 15 LSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFD 74
LS L C + +++ +++H+H + LG + N + +YS A +FD
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 75 DISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALEL 134
++ + SW + + G + G + A LF M +G D + L
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAM---------------IKSGEKPDLVTL 360
Query: 135 FVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ G G F L + K + R G NV++ N+LI MY K G
Sbjct: 361 LSLISGCG------KFGSLET-------GKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
+ + + + +++W +++ G AL F KM D + P+ T ++
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVS-SAAIDLFSKCNRLEDSVRL 303
C++ L+KG + F +V + + S +DL + +LE+++ L
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/537 (26%), Positives = 265/537 (49%), Gaps = 5/537 (0%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
+ G++ A ++ M DVV+WNS+I GY N +ALE F +M AG + + +
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 153 L---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
+ + +S+ ++H +I+ G D SN+ +GN+LI MY K L Y L M
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D+ISW +++ + H AL F + + D+ +++ S L+ + K++
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
+ G + ++++ + +D++ KC + + R+F D TSMISS A +
Sbjct: 511 CHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
+A+ LF + + + C+LS+ + + G +IH + + GF + +A +V
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MYA G + A +F+ + K L+ + +++ +G ++LF ++ E ++PD I
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
+ A+L AC++ +DEG ME E+ ++P EHY +V+ML +A + EA + V+
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESL 569
M T ++W +L+ C H + ++ E A+ ++E EP+ P ++++ + GRW +
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 809
Query: 570 VRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETE 626
+VR M+ ++ GCSW M V+ F + H K+ ++E E
Sbjct: 810 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 226/468 (48%), Gaps = 36/468 (7%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
+ +G LS LL C + + +H+ +KLG ++ ++ N + +Y+
Sbjct: 174 RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA----- 228
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR-DVVSWNSMISGYASN 125
K+ L A +LFDG + D V WNS++S Y+++
Sbjct: 229 --------------------------KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 126 GFSSDALELFVEMQGAGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVL 182
G S + LELF EM G P+S+T S LT+ S K++H +++S S + +
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
N+LIAMY + G + + ++ M D+++WNSL+ + ++ AL F M A
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
D+ + +++++ L +L G ++ A+ K G+ N V + ID++SKCN R
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
F D T++I+ YA +D +AL LF ++ + E ++ +L + S+
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 502
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMG 422
+ + +IH + + G D V+ + LV +Y K + A +F K KD+VSW +++
Sbjct: 503 MLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561
Query: 423 LAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
A NG S ++LF+ ++ G++ D + L +L A S +++G +I
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 609
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 181/379 (47%), Gaps = 24/379 (6%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G L +A ++FD MP R +WN+MI Y SNG + AL L+ M+ G+ +F
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 153 LTSLVSSPCHAKQVHGRIIRSGMDLSN--VVLG--------NSLIAMYGKVGLVDYSFSV 202
L + R IRSG +L + V LG N+L++MY K D S +
Sbjct: 188 LLKACAKL--------RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND--DLSAAR 237
Query: 203 ILT---MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
L +K D + WNS++ + +G L F +M P+ +T + ++ C
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 260 RDLDKGKQVFAFCFKVGFVYNSI-VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSM 318
GK++ A K + + V +A I ++++C ++ + R+ + + D S+
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF 378
I Y + + ++AL F + + E ++ ++++ + G+++HA V K G+
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
+S+ + +TL+ MY+K + F KDL+SW T++ G A N L+LF++
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 439 LIREGMAPDRITLAAVLLA 457
+ ++ M D + L ++L A
Sbjct: 478 VAKKRMEIDEMILGSILRA 496
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 4/299 (1%)
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
+Q+H RI ++ L L+ MYGK G +D + V M +WN+++ A
Sbjct: 98 QGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTC-STLMSVCSNLRDLDKGKQVFAFCFKVGFVYN 280
G ALA ++ MR E +P + L+ C+ LRD+ G ++ + K+G+
Sbjct: 158 VSNGEPASALALYWNMR-VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216
Query: 281 SIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTALCTSMISSYATHDLGEDALHLFVLTL 339
+ +A + +++K + L + RLF Q++ D L S++SSY+T + L LF
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV-LASTLVHMYAKFGII 398
P Y + L++ F ++G +IHA V K S + + + L+ MY + G +
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336
Query: 399 DDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
A I + D+V+WN+++ G N L+ F ++I G D +++ +++ A
Sbjct: 337 PQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 2/225 (0%)
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYN-SIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
++ +C R + +G+Q+ + FK + ++ + ++ KC L+D+ ++F E
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
+MI +Y ++ AL L+ E + LL + + + G ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKV 429
+L+ KLG+ S + + LV MYAK + A +F+ + K D V WN+I+ + +GK
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSM 474
TL+LF+E+ G AP+ T+ + L AC+ S+ G +I S+
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 310
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 36/241 (14%)
Query: 29 KSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICL 88
KS+ VK +H H L+ GL T + N +D+Y ++ A +VF+ I K+ S
Sbjct: 501 KSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS----- 554
Query: 89 KGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSF 148
W SMIS A NG S+A+ELF M G+ S
Sbjct: 555 --------------------------WTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 149 TFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
+ S +S +++H ++R G L + +++ MY G + + +V
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI-AVAVVDMYACCGDLQSAKAVFDR 647
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
+++ ++ + S++ A G + A+ F KMR + PD + L+ CS+ LD+G
Sbjct: 648 IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
Query: 266 K 266
+
Sbjct: 708 R 708
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 157/599 (26%), Positives = 286/599 (47%), Gaps = 44/599 (7%)
Query: 2 YTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYS 61
+ ++K +TSL +L+ L S+N + +KLG + + L +YS
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLN------SQIIKLGYSDNVVVQTSVLGMYS 245
Query: 62 DLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISG 121
G + A ++FD +++ RD V+WN+MI G
Sbjct: 246 SCGDLESARRIFDCVNN-------------------------------RDAVAWNTMIVG 274
Query: 122 YASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLS 178
N D L F M +G+ P+ FT+SI+ S + S K +H RII S L+
Sbjct: 275 SLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD-SLA 333
Query: 179 NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM- 237
++ L N+L+ MY G + +F V + +++SWNS++ C G E A+ + ++
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Query: 238 RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRL 297
R + PD++T S +S + GK + K+G+ + V + + ++ K
Sbjct: 394 RMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREA 453
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
E + ++F D L T MI ++ E A+ F+ RE R + +S ++ +
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWN 417
S + G H L + GF+ + LV MY K G + A IF+ DL WN
Sbjct: 514 SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWN 573
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
+++ + +G V L F++++ G PD +T ++L AC++ +G K ++ E
Sbjct: 574 SMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKE 632
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE-TMPYTITLDMWRLILSVCVIHGDLQVIE 536
G+K G +HY+ +V ++SKAG++ EA++++E + P ++WR +LS CV +LQ+
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGL 692
Query: 537 TVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNH 595
A++I++ +P+ +++L+ Y + GRWE + +R+ + + + G SW + N+
Sbjct: 693 YAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNN 751
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 173/379 (45%), Gaps = 13/379 (3%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVS---------WNSMISGYASNGFSSDALELFVEMQGAG 142
++ L A ++FD MP R++V+ + SM S S + ++ M
Sbjct: 33 VRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLNE 92
Query: 143 MRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLS--NVVLGNSLIAMYGKVGLVDYSF 200
+ S + ++ A+Q+H ++ +G + + N+LI+MY + G ++ +
Sbjct: 93 IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQAR 152
Query: 201 SVILTMKKIDIISWNSLMWACHR-AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
V M +++S+N+L A R A M + P+ T ++L+ VC+ L
Sbjct: 153 KVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVL 212
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
D+ G + + K+G+ N +V ++ + ++S C LE + R+F + D +MI
Sbjct: 213 EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMI 272
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
+D ED L F L + PT++ S +L+ S +G IHA +
Sbjct: 273 VGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL 332
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
+D L + L+ MY G + +A ++F +LVSWN+I+ G + NG + +++ L
Sbjct: 333 ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 440 IREGMA-PDRITLAAVLLA 457
+R PD T +A + A
Sbjct: 393 LRMSTPRPDEYTFSAAISA 411
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 133/286 (46%), Gaps = 10/286 (3%)
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL- 242
N+LI+MY + ++ + V M + +I++ L + K+ ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 243 --LPDQFTCSTLMSV---CSNLRDLDKGKQVFAFCFKVGF---VYNSIVSSAAIDLFSKC 294
+P S+++ + C ++ L + +Q+ A G + ++ I ++ +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 295 NRLEDSVRLFTEQDRWDTALCTSMISSYATH-DLGEDALHLFVLTLRENIRPTEYMVSCL 353
LE + ++F + + ++ S+Y+ + D A L E ++P + L
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 354 LSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDL 413
+ ++ V +G +++ + KLG+ + V+ ++++ MY+ G ++ A IF+ +D
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACN 459
V+WNT+++G N K+ L F+ ++ G+ P + T + VL C+
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 269/591 (45%), Gaps = 73/591 (12%)
Query: 88 LKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSS 147
+ L KSG++ +A Q+FDGMP D V+WN+M++ Y+ G +A+ LF +++ + +P
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 148 FTFSILTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVG---------- 194
++F+ + S +S + K ++ +IRSG +++ + NSLI MYGK
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGF-CASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 195 -----------------------LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELAL 231
+ + V + M K +WN ++ G E L
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 232 AHFYKMRDAELLPDQFTCSTLMSVCS-NLRDLDKGKQVFAFCFKVGF-----VYNSIVS- 284
+ F +M ++E PD +T S+LM+ CS + ++ G+ V A K G+ NS++S
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSF 249
Query: 285 -------------------------SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
++ ID K E ++ +F + T+MI
Sbjct: 250 YTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMI 309
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
+ Y + GE AL FV ++ + + +L + S + G IH + GF+
Sbjct: 310 TGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQ 369
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
A + + LV++YAK G I +A F + KDLVSWNT++ +G L L+ +
Sbjct: 370 GYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM 429
Query: 440 IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGM 499
I G+ PD +T +L C++ V+EG IF SM ++ + +H T +++M + G
Sbjct: 430 IASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGH 489
Query: 500 LKEAIDIVETMPYTIT----LDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLV 555
L EA D+ T +T W +L C H ++ V+K + EP +++
Sbjct: 490 LAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVL 549
Query: 556 LAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
L+ Y GRW+ VR++M ++ K+ GCSW + N V TF H
Sbjct: 550 LSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSH 600
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 203/465 (43%), Gaps = 49/465 (10%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
++T L+ + S+ + +L C S +V F + + + ++ G + N +D+Y
Sbjct: 57 LFTQLRFSDAKPDDYSF-TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMY 115
Query: 61 SDLGHINDALKVFDDI--SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSM 118
A KVF D+ +N +W L + + Q A +F MP R +WN M
Sbjct: 116 GKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIM 175
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSP----CHAKQVHGRIIRSG 174
ISG+A G L LF EM + +P +TFS L + S+ + + VH ++++G
Sbjct: 176 ISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG 235
Query: 175 MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC------------- 221
S V NS+++ Y K+G D + + +++ + +SWNS++ AC
Sbjct: 236 WS-SAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVF 294
Query: 222 ------------------HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLD 263
R G E AL F +M + + D F ++ CS L L
Sbjct: 295 HLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLG 354
Query: 264 KGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
GK + GF + V +A ++L++KC ++++ R F + D +M+ ++
Sbjct: 355 HGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFG 414
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI-HALVP--KLGFES 380
H L + AL L+ + I+P LL++ S VE G I ++V ++ E
Sbjct: 415 VHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEV 474
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNE-----TKIKDLVSWNTIM 420
D V + ++ M+ + G + +A + T + SW T++
Sbjct: 475 DHV--TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 170/354 (48%), Gaps = 23/354 (6%)
Query: 19 STLLDHCLSQKS-VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
S+L++ C + S V + ++VHA LK G ++ N L Y+ LG +DA++ + I
Sbjct: 208 SSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIE 267
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
SWN + +K G+ A ++F P +++V+W +MI+GY NG AL FVE
Sbjct: 268 VLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVE 327
Query: 138 MQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
M +G+ F + + S H K +HG +I G +GN+L+ +Y K G
Sbjct: 328 MMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQ-GYAYVGNALVNLYAKCG 386
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
+ + + D++SWN++++A G + AL + M + + PD T L++
Sbjct: 387 DIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLT 446
Query: 255 VCSNLRDLDKGKQVFAFC---FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE----- 306
CS+ +++G +F +++ + + + ID+F + L ++ L T
Sbjct: 447 TCSHSGLVEEGCMIFESMVKDYRIPLEVDHV--TCMIDMFGRGGHLAEAKDLATTYSSLV 504
Query: 307 QDRWDTALCTSMISSYATH---DLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
D + + +++ + +TH +LG + VL + E P+E M LLS+
Sbjct: 505 TDSSNNSSWETLLGACSTHWHTELGREVSK--VLKIAE---PSEEMSFVLLSNL 553
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 170/396 (42%), Gaps = 74/396 (18%)
Query: 177 LSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK 236
+S +V S IA K G + + V M ++D ++WN+++ + R G H+ A+A F +
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ 60
Query: 237 MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN- 295
+R ++ PD ++ + ++S C++L ++ G+++ + + GF + V+++ ID++ KC+
Sbjct: 61 LRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSD 120
Query: 296 --------------------------------RLEDSVRLFTEQDRWDTALCTSMISSYA 323
+ E ++ +F E + MIS +A
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSI-FLPVEVGIQIHALVPKLGFESDA 382
E L LF L +P Y S L+++ S V G +HA++ K G+ S
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 383 VLASTLVHMYAKFGIIDD-------------------------------ALHIFNETKIK 411
++++ Y K G DD AL +F+ K
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
++V+W T++ G NG L F E+++ G+ D AVL AC+ + + G I
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 472 FSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEA 503
+ + G + Y YV V + +K G +KEA
Sbjct: 361 GCL-----IHCGFQGYAYVGNALVNLYAKCGDIKEA 391
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 174/628 (27%), Positives = 293/628 (46%), Gaps = 68/628 (10%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+ L C S V + +H LK GL++ Y+ N L++Y+ + DA VF D +
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+S S+NI + G ++S +L +A +LFD MP R VS+ ++I GYA N S+A+ELF EM+
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 140 GAGMRPSSFTFSILTSLVSS-----PCHAKQ-------VHGRIIRSG------------- 174
G+ + T + + S S C Q + GR+ S
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 175 --------MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH 226
M N+V N ++ Y K GL++ + + + + DI+SW +++ C R
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 227 HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF--------- 277
+ AL ++ +M + P + L+S + KG Q+ K GF
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQAT 345
Query: 278 ---------------------VYNSIVS-SAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
V + I S +A I F K +E + +F + D
Sbjct: 346 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSW 405
Query: 316 TSMISSYATHDLGEDALHLFV-LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+MIS YA + ALHLF + ++P + + S+ S +E G + H +
Sbjct: 406 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN 465
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK---IKDLVSWNTIMMGLAYNGKVSV 431
+ L + ++ MYAK G I+ AL+IF++TK + WN I+ G A +G +
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKL 525
Query: 432 TLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVV 491
LDL+ +L + P+ IT VL AC + V+ G F SM+++ G++P +HY +V
Sbjct: 526 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585
Query: 492 EMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPF 551
++L KAG L+EA ++++ MP + +W ++LS HG++++ E A E+ +P
Sbjct: 586 DLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGG 645
Query: 552 PYLVLAQAYQMMGRWESLVRVRKDMEQK 579
++L+ Y GRWE + VR++M +
Sbjct: 646 CKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 207/457 (45%), Gaps = 49/457 (10%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+T++ C + +++ + +KL L ++ L +Y + DA K+FD++
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+N +WN+ L G K+G + A +LFD + +D+VSW +MI G +AL + EM
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 139 QGAGMRPSS-FTFSILTSLVSSPCHAK--QVHGRIIRSGMD--------------LSN-- 179
GM+PS +L++ S +K Q+HG I++ G D +SN
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 180 --------------VVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG 225
+ N+LIA + K G+V+ + V DI SWN+++ ++
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 226 HHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
+LAL F +M +++ PD T ++ S S+L L++GK+ + N ++
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT 476
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDR--------WDTALCTSMISSYATHDLGEDALHLFV 336
+A ID+++KC +E ++ +F + W+ +C S ATH + AL L+
Sbjct: 477 AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGS-----ATHGHAKLALDLYS 531
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVG-IQIHALVPKLGFESDAVLASTLVHMYAKF 395
I+P +LS+ VE+G ++ G E D +V + K
Sbjct: 532 DLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKA 591
Query: 396 GIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSV 431
G +++A + + +K D++ W ++ +G V +
Sbjct: 592 GRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEI 628
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/565 (27%), Positives = 279/565 (49%), Gaps = 40/565 (7%)
Query: 34 VKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLL- 92
VK H +K G+ +L N+ L Y+ + +DA K+FD++ +N +WNI + G++
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ 114
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
+ G + L GF + LF ++ +F
Sbjct: 115 RDGDTNHRAHL----------------------GFCYLSRILFTDVS-----LDHVSFMG 147
Query: 153 LTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
L L + + K Q+H +++ G++ S+ SL+ YGK GL+ + V +
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLE-SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR 206
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKM--RDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D++ WN+L+ + G + A M D FT S+L+S C +++GKQ
Sbjct: 207 DLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQ 262
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ A FKV + ++ V++A +++++K N L D+ F + +MI +A +
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE 322
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
G +A+ LF L EN++P E + +LSS + F + Q+ A+V K G +A++
Sbjct: 323 GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANS 382
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
L+ Y++ G + +AL F+ + DLVSW +++ LA +G +L +F+ ++++ + PD
Sbjct: 383 LISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPD 441
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
+IT VL AC++G V EG++ F M + ++ +EHYT ++++L +AG + EA D++
Sbjct: 442 KITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVL 501
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
+MP + C IH + ++ AK+++E EP P Y +L+ AY G W
Sbjct: 502 NSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWN 561
Query: 568 SLVRVRKDMEQKC-TKEFIGCSWFG 591
+RK + C + GCSW G
Sbjct: 562 QAALLRKRERRNCYNPKTPGCSWLG 586
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 261/514 (50%), Gaps = 8/514 (1%)
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+GNA LFD MPVRD+ SWN+MISGY +G + +AL L G S S+L++
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL---SNGLRAMDSVTVVSLLSAC 257
Query: 157 VSSPCHAKQV--HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISW 214
+ + V H I+ G++ S + + N LI +Y + G + V M D+ISW
Sbjct: 258 TEAGDFNRGVTIHSYSIKHGLE-SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 215 NSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
NS++ A A++ F +MR + + PD T +L S+ S L D+ + V F +
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 275 VG-FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
G F+ + + +A + +++K ++ + +F D ++IS YA + +A+
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 334 LFVLTLREN-IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
++ + E I + +L + S + G+++H + K G D + ++L MY
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 393 AKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLA 452
K G ++DAL +F + + V WNT++ ++G + LFKE++ EG+ PD IT
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 453 AVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPY 512
+L AC++ VDEG F M+T++G+ P +HY +V+M +AG L+ A+ +++M
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 513 TITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRV 572
+W +LS C +HG++ + + ++ + E EP+ +++L+ Y G+WE + +
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676
Query: 573 RKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
R K ++ G S + N V F + H
Sbjct: 677 RSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 192/420 (45%), Gaps = 41/420 (9%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+LL C N +H++ +K GL + ++ N+ +DLY++ G + D KVFD
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR---- 307
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
M VRD++SWNS+I Y N A+ LF EM+
Sbjct: 308 ---------------------------MYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 140 GAGMRPSSFTFSILTSLVSS-----PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ ++P T L S++S C + V G +R G L ++ +GN+++ MY K+G
Sbjct: 341 LSRIQPDCLTLISLASILSQLGDIRAC--RSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLM 253
LVD + +V + D+ISWN+++ + G A+ + M + E+ +Q T +++
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
CS L +G ++ K G + V ++ D++ KC RLED++ LF + R ++
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
++I+ + H GE A+ LF L E ++P LLS+ S V+ G ++
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
Query: 374 -PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSV 431
G +V MY + G ++ AL ++ D W ++ +G V +
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 638
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 221/472 (46%), Gaps = 23/472 (4%)
Query: 85 NICLKGLLKS-----GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELF-VEM 138
N+C+ L + G + A FD + RDV +WN MISGY G SS+ + F + M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
+G+ P TF + + ++H ++ G + +V + SLI +Y + V
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGF-MWDVYVAASLIHLYSRYKAVGN 203
Query: 199 SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSN 258
+ + M D+ SWN+++ ++G+ + AL +R D T +L+S C+
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTE 259
Query: 259 LRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSM 318
D ++G + ++ K G VS+ IDL+++ RL D ++F D S+
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG- 377
I +Y ++ A+ LF I+P + L S S + + + G
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFK 437
F D + + +V MYAK G++D A +FN D++SWNTI+ G A NG S ++++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 438 ELIREG-MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVV----E 492
+ EG +A ++ T +VL AC+ + +G+K+ + +K G +VV +
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL-----LKNGLYLDVFVVTSLAD 494
Query: 493 MLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIME 544
M K G L++A+ + +P ++ W +++ HG + + KE+++
Sbjct: 495 MYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGEKAVMLFKEMLD 545
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 32/385 (8%)
Query: 150 FSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMY---GKVGLVDYSFSVILTM 206
F T+L S+ C +H R++ S + NV + L+ +Y G V L ++F I
Sbjct: 61 FRYCTNLQSAKC----LHARLVVS-KQIQNVCISAKLVNLYCYLGNVALARHTFDHI--- 112
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYK-MRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
+ D+ +WN ++ RAG+ + F M + L PD T +++ C + D G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---G 169
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
++ K GF+++ V+++ I L+S+ + ++ LF E D +MIS Y
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 326 DLGEDALHLFVLTLRENIRPTEYM-VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
++A LTL +R + + V LLS+ + G+ IH+ K G ES+ +
Sbjct: 230 GNAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
++ L+ +YA+FG + D +F+ ++DL+SWN+I+ N + + LF+E+ +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGE--EHYTY---VVEMLSKAGM 499
PD +TL + LA D I+ S++ F ++ G E T VV M +K G+
Sbjct: 345 QPDCLTL--ISLASILSQLGD--IRACRSVQG-FTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 500 LKEAIDIVETMPYTITLDMWRLILS 524
+ A + +P T + W I+S
Sbjct: 400 VDSARAVFNWLPNTDVIS-WNTIIS 423
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 145/258 (56%), Gaps = 21/258 (8%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTFS 151
K G + +A +F+ +P DV+SWN++ISGYA NGF+S+A+E++ M+ G + + T+
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 152 ILTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+ S +Q +HGR++++G+ L +V + SL MYGK G ++ + S+ + +
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 209 IDIISWNSLMWACHR-AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
++ + WN+L+ ACH GH E A+ F +M D + PD T TL+S CS+ +D+G+
Sbjct: 515 VNSVPWNTLI-ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ- 572
Query: 268 VFAFCFKVGFVYNSIVSS-----AAIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISS 321
+CF++ I S +D++ + +LE +++ + D ++ +++S+
Sbjct: 573 ---WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 322 YATH---DLGEDAL-HLF 335
H DLG+ A HLF
Sbjct: 630 CRVHGNVDLGKIASEHLF 647
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 21/278 (7%)
Query: 251 TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
TL C+NL+ K + A + N +S+ ++L+ + + F
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 311 DTALCTSMISSYATHDLGEDALHLFVL-TLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
D MIS Y + + F L L + P +L + + G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
H L K GF D +A++L+H+Y+++ + +A +F+E ++D+ SWN ++ G +G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
L L L A D +T+ ++L AC + G+ I + +K G E +
Sbjct: 233 KEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIH-----SYSIKHGLESELF 283
Query: 490 V----VEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
V +++ ++ G L++ + + M Y L W I+
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRM-YVRDLISWNSII 320
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 51/206 (24%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H LK GL ++ D+Y G + DAL +F I NS
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS--------------- 517
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
V WN++I+ + +G A+ LF EM G++P TF L S
Sbjct: 518 ----------------VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 157 VSSPCHAKQVHGRIIRSG-----MDLSNVVLGNSL------IAMYGKVGLVDYSFSVILT 205
S H ++ G M ++ + SL + MYG+ G ++ + I +
Sbjct: 562 CS--------HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 613
Query: 206 MK-KIDIISWNSLMWACHRAGHHELA 230
M + D W +L+ AC G+ +L
Sbjct: 614 MSLQPDASIWGALLSACRVHGNVDLG 639
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 271/523 (51%), Gaps = 25/523 (4%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
LK + +A ++FD M VRD VS+N+MI GY +++ +F+E +P T S
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVS 311
Query: 152 ILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
S++ + H AK ++ ++++G L + V N LI +Y K G + + V +
Sbjct: 312 ---SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDMITARDVFNS 367
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
M+ D +SWNS++ ++G A+ F M E D T L+SV + L DL G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
K + + K G + VS+A ID+++KC + DS+++F+ DT ++IS A
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS--ACV 485
Query: 326 DLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPV-------EVGIQIHALVPKLGF 378
G+ A L V T +R +E + +++F + LP+ +G +IH + + G+
Sbjct: 486 RFGDFATGLQVTT---QMRKSEVVPD--MATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
ES+ + + L+ MY+K G ++++ +F +D+V+W ++ G+ L+ F +
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 439 LIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG 498
+ + G+ PD + A++ AC++ VDEG+ F M+T + + P EHY VV++LS++
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 660
Query: 499 MLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQ 558
+ +A + ++ MP +W +L C GD++ E V++ I+E P P ++ +
Sbjct: 661 KISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASN 720
Query: 559 AYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQS 601
AY + +W+ + +RK ++ K + G SW + +V+ F S
Sbjct: 721 AYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSS 763
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 255/532 (47%), Gaps = 38/532 (7%)
Query: 19 STLLDHCLSQKS-VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
S + LS S +N ++ +HA + LGL++ + + +D YS +L VF +S
Sbjct: 7 SPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
P ++V WNS+I ++ NG +ALE + +
Sbjct: 67 ------------------------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGK 96
Query: 138 MQGAGMRPSSFTFSILTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
++ + + P +TF + + A+ V+ +I+ G + S++ +GN+L+ MY ++G
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE-SDLFVGNALVDMYSRMG 155
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
L+ + V M D++SWNSL+ G++E AL +++++++ ++PD FT S+++
Sbjct: 156 LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLP 215
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
NL + +G+ + F K G +V++ + ++ K R D+ R+F E D D+
Sbjct: 216 AFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVS 275
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+MI Y ++ E+++ +F+ L + +P VS +L + + + I+ +
Sbjct: 276 YNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
K GF ++ + + L+ +YAK G + A +FN + KD VSWN+I+ G +G + +
Sbjct: 335 KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 435 LFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
LFK ++ D IT ++ + + G K S + G+ +++M
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMERE 546
+K G + +++ I +M T+ W ++S CV GD V ++ + E
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRFGDFATGLQVTTQMRKSE 504
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 250/531 (47%), Gaps = 45/531 (8%)
Query: 36 IVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSG 95
+V+ L +G + ++GN +D+YS +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMG------------------------------- 155
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
L A Q+FD MPVRD+VSWNS+ISGY+S+G+ +ALE++ E++ + + P SFT S +
Sbjct: 156 LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLP 215
Query: 156 LVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
+ KQ +HG ++S S VV+ N L+AMY K + V M D +
Sbjct: 216 AFGNLLVVKQGQGLHGFALKS-GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSV 274
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
S+N+++ + E ++ F + D + PD T S+++ C +LRDL K ++ +
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSY-ATHDLGEDA 331
K GFV S V + ID+++KC + + +F + DT S+IS Y + DL E A
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLME-A 392
Query: 332 LHLF--VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
+ LF ++ + E Y++ L+S + ++ G +H+ K G D +++ L+
Sbjct: 393 MKLFKMMMIMEEQADHITYLM--LISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MYAK G + D+L IF+ D V+WNT++ G + L + ++ + + PD
Sbjct: 451 DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA 510
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
T L C + G +I + FG + + ++EM SK G L+ + + E
Sbjct: 511 TFLVTLPMCASLAAKRLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAY 560
M + +I + + + +ET A ME+ P + +A Y
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFAD--MEKSGIVPDSVVFIAIIY 618
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 201/416 (48%), Gaps = 8/416 (1%)
Query: 144 RPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI 203
R SS S S S+ +++H +I G+D S+ G LI Y S SV
Sbjct: 4 RVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGK-LIDKYSHFREPASSLSVF 62
Query: 204 LTMKKI-DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDL 262
+ ++ WNS++ A + G AL + K+R++++ PD++T +++ C+ L D
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 263 DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSY 322
+ G V+ +GF + V +A +D++S+ L + ++F E D S+IS Y
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY 182
Query: 323 ATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDA 382
++H E+AL ++ I P + VS +L +F L V+ G +H K G S
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
V+ + LV MY KF DA +F+E ++D VS+NT++ G V ++ +F E + +
Sbjct: 243 VVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ 302
Query: 443 GMAPDRITLAAVLLACNYGSFVDEGI-KIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLK 501
PD +T+++VL AC G D + K ++ + G ++++ +K G +
Sbjct: 303 -FKPDLLTVSSVLRAC--GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 502 EAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP-FPYLVL 556
A D+ +M T+ W I+S + GDL + K +M E QA YL+L
Sbjct: 360 TARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 154/580 (26%), Positives = 284/580 (48%), Gaps = 40/580 (6%)
Query: 31 VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
+ F K +H++ + G+ L +D YS + DA++V +
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS--------------- 284
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
SG+ +DV W S++SG+ N + +A+ F+EM+ G++P++FT+
Sbjct: 285 ---SGE-------------QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 151 SILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL-TM 206
S + SL V S KQ+H + I+ G + S V GN+L+ MY K + S + M
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV-GNALVDMYMKCSASEVEASRVFGAM 387
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGK 266
+++SW +L+ G + +M E+ P+ T S ++ CS LR + +
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
++ A+ + +V ++ +D ++ +++ + + R D TS+++ + ++
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF--NE 505
Query: 327 LGEDALHLFVLTLR--ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
LG+ + L V+ + IR + + +S+ + +E G +H K GF A +
Sbjct: 506 LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASV 565
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
++LV MY+K G ++DA +F E D+VSWN ++ GLA NG +S L F+E+ +
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET 625
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
PD +T +L AC+ G D G++ F M+ + ++P EHY ++V +L +AG L+EA
Sbjct: 626 EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMG 564
+VETM +++ +L C G+L + E +A + + P P Y++LA Y G
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESG 745
Query: 565 RWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQL 604
+ E + R M +K + +G S ++ V++F S +
Sbjct: 746 KPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDV 785
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 195/375 (52%), Gaps = 12/375 (3%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
LK+ + NA +LFD M R V +W MIS + + + AL LF EM +G P+ FTFS
Sbjct: 69 LKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFS 128
Query: 152 ILTSLVSSPC------HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
S+V S + +VHG +I++G + N V+G+SL +Y K G + + +
Sbjct: 129 ---SVVRSCAGLRDISYGGRVHGSVIKTGFE-GNSVVGSSLSDLYSKCGQFKEACELFSS 184
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
++ D ISW ++ + A AL + +M A + P++FT L+ S L L+ G
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFG 243
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATH 325
K + + G N ++ ++ +D +S+ +++ED+VR+ D L TS++S + +
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 326 DLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLA 385
++A+ F+ ++P + S +LS S ++ G QIH+ K+GFE +
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 386 STLVHMYAKFGIID-DALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
+ LV MY K + +A +F ++VSW T+++GL +G V L E+++ +
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 445 APDRITLAAVLLACN 459
P+ +TL+ VL AC+
Sbjct: 424 EPNVVTLSGVLRACS 438
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/595 (23%), Positives = 265/595 (44%), Gaps = 60/595 (10%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S+++ C + +++ VH +K G + +G+ DLYS G +A ++F + +
Sbjct: 128 SSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN 187
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
++ SW + + L+ + + W +AL+ + EM
Sbjct: 188 ADTISWTMMISSLVGARK------------------WR-------------EALQFYSEM 216
Query: 139 QGAGMRPSSFTFSILTSLVS--SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
AG+ P+ FTF L S K +H II G+ L NVVL SL+ Y + +
Sbjct: 217 VKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL-NVVLKTSLVDFYSQFSKM 275
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ + V+ + + D+ W S++ R + A+ F +MR L P+ FT S ++S+C
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE-DSVRLFTEQDRWDTALC 315
S +R LD GKQ+ + KVGF ++ V +A +D++ KC+ E ++ R+F +
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW 395
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
T++I H +D L + ++ + P +S +L + S V ++IHA + +
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
+ + V+ ++LV YA +D A ++ K +D +++ +++ GK + L +
Sbjct: 456 RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSV 515
Query: 436 FKELIREGMAPDRITLAAVLLA-CNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
+ +G+ D+++L + A N G+ E K + G +V+M
Sbjct: 516 INYMYGDGIRMDQLSLPGFISASANLGAL--ETGKHLHCYSVKSGFSGAASVLNSLVDMY 573
Query: 495 SKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIM--EREPQAPFP 552
SK G L++A + E + T + W ++S +G + + +E+ E EP +
Sbjct: 574 SKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDS-VT 631
Query: 553 YLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHY 607
+L+L A GR L G +F + +Y + Q++HY
Sbjct: 632 FLILLSACS-NGRLTDL----------------GLEYFQVMKKIYNIEP-QVEHY 668
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 192/387 (49%), Gaps = 9/387 (2%)
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
+H +I+ G+ L N+ L N+L+++Y K + + + M + +W ++ A ++
Sbjct: 44 HIHCPVIKFGL-LENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKS 102
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
AL+ F +M + P++FT S+++ C+ LRD+ G +V K GF NS+V
Sbjct: 103 QEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVG 162
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
S+ DL+SKC + +++ LF+ DT T MISS +AL + ++ +
Sbjct: 163 SSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP 222
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
P E+ LL + S FL +E G IH+ + G + VL ++LV Y++F ++DA+ +
Sbjct: 223 PNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 405 FNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFV 464
N + +D+ W +++ G N + + F E+ G+ P+ T +A+L C+ +
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 465 DEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLK-EAIDIVETM--PYTITLDMWRL 521
D G +I S + G + + +V+M K + EA + M P ++ W
Sbjct: 342 DFGKQI-HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVS---WTT 397
Query: 522 ILSVCVIHGDLQVIETVAKEIMEREPQ 548
++ V HG +Q + E+++RE +
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVE 424
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 238 RDAELLPDQFTCSTLMSVC-SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNR 296
R EL Q +C ++S C SN + G + K G + N + + + L+ K +
Sbjct: 16 RTNELGNLQKSCIRILSFCESNSSRI--GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDG 73
Query: 297 LEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
+ ++ +LF E T MIS++ AL LF + P E+ S ++ S
Sbjct: 74 IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRS 133
Query: 357 FSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSW 416
+ + G ++H V K GFE ++V+ S+L +Y+K G +A +F+ + D +SW
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW 193
Query: 417 NTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY 460
++ L K L + E+++ G+ P+ T +L A ++
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF 237
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 150/524 (28%), Positives = 257/524 (49%), Gaps = 47/524 (8%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSS-DALELFVEMQGAGM 143
N + ++SG + A ++F GM ++ ++WNS++ G + + +A +LF E+
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP---- 120
Query: 144 RPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI 203
P +F+++I+ S C+ + V+ +S D
Sbjct: 121 EPDTFSYNIMLS-----CYVRNVNFEKAQSFFD--------------------------- 148
Query: 204 LTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLD 263
M D SWN+++ R G E A FY M + ++ + + ++S DL+
Sbjct: 149 -RMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLE 203
Query: 264 KGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISSY 322
K F KV V + +A I + K ++E + +F + + +MIS Y
Sbjct: 204 KASHFF----KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 259
Query: 323 ATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDA 382
+ ED L LF L E IRP +S L S +++G QIH +V K +D
Sbjct: 260 VENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDV 319
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
++L+ MY K G + DA +F K KD+V+WN ++ G A +G L LF+E+I
Sbjct: 320 TALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 443 GMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKE 502
+ PD IT AVLLACN+ V+ G+ F SM ++ V+P +HYT +V++L +AG L+E
Sbjct: 380 KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 439
Query: 503 AIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQM 562
A+ ++ +MP+ ++ +L C +H ++++ E A+++++ Q Y+ LA Y
Sbjct: 440 ALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS 499
Query: 563 MGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
RWE + RVRK M++ + G SW ++N V+ F+S+ H
Sbjct: 500 KNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIH 543
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 162/361 (44%), Gaps = 11/361 (3%)
Query: 47 NTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDG 106
NT T+ + + + D + +A ++FD+I ++ S+NI L +++ A FD
Sbjct: 91 NTITW-NSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDR 149
Query: 107 MPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV 166
MP +D SWN+MI+GYA G A ELF M M + +++ + S C +
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIE-CGDLEK 204
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI--LTMKKIDIISWNSLMWACHRA 224
+ + VV ++I Y K V+ + ++ +T+ K ++++WN+++
Sbjct: 205 ASHFFKVA-PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK-NLVTWNAMISGYVEN 262
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
E L F M + + P+ S+ + CS L L G+Q+ K +
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
++ I ++ KC L D+ +LF + D +MIS YA H + AL LF + IR
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 382
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
P +L + + V +G+ ++V E + +V + + G +++AL
Sbjct: 383 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 442
Query: 404 I 404
+
Sbjct: 443 L 443
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 263/530 (49%), Gaps = 7/530 (1%)
Query: 104 FDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC-- 161
F P V+ IS SNG +AL L + M G M + ++L + +
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL-LEMAMLGPEMGFHGYD-ALLNACLDKRALR 69
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
++VH +I++ L L L+ YGK ++ + V+ M + +++SW +++
Sbjct: 70 DGQRVHAHMIKTRY-LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
+ GH AL F +M ++ P++FT +T+++ C L GKQ+ K + +
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
V S+ +D+++K +++++ +F D CT++I+ YA L E+AL +F E
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
+ P + LL++ S ++ G Q H V + AVL ++L+ MY+K G + A
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 402 LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG-MAPDRITLAAVLLACNY 460
+F+ + +SWN +++G + +G L+LF+ + E + PD +TL AVL C++
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 461 GSFVDEGIKIFFSM-ETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMW 519
G D G+ IF M E+G KPG EHY +V+ML +AG + EA + ++ MP T +
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428
Query: 520 RLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQK 579
+L C +H + + E+V + ++E EP+ Y++L+ Y GRW + VR M QK
Sbjct: 429 GSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQK 488
Query: 580 CTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
+ G SW + ++ F +N H ++ +M+ GYV
Sbjct: 489 AVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 538
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 187/408 (45%), Gaps = 38/408 (9%)
Query: 10 GPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDA 69
GP LL+ CL ++++ + VHAH +K TYL R L Y + DA
Sbjct: 47 GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 106
Query: 70 LKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSS 129
KV D+ MP ++VVSW +MIS Y+ G SS
Sbjct: 107 RKVLDE-------------------------------MPEKNVVSWTAMISRYSQTGHSS 135
Query: 130 DALELFVEMQGAGMRPSSFTF-SILTSLV--SSPCHAKQVHGRIIRSGMDLSNVVLGNSL 186
+AL +F EM + +P+ FTF ++LTS + S KQ+HG I++ D S++ +G+SL
Sbjct: 136 EALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD-SHIFVGSSL 194
Query: 187 IAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQ 246
+ MY K G + + + + + D++S +++ + G E AL F+++ + P+
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 247 FTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
T ++L++ S L LD GKQ + + +++ ++ ID++SKC L + RLF
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314
Query: 307 QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE-NIRPTEYMVSCLLSSFSIFLPVEV 365
+M+ Y+ H LG + L LF L E ++P + +LS S +
Sbjct: 315 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDT 374
Query: 366 GIQIH--ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK 411
G+ I + + G + +V M + G ID+A K
Sbjct: 375 GLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 281/547 (51%), Gaps = 32/547 (5%)
Query: 76 ISHKNSTSWNICLKGLL-----KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSD 130
+SH S N+ L L K G + A Q+FD MP R+VVSW ++I+GY G +
Sbjct: 86 LSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQE 145
Query: 131 ALELFVEMQGAGMRPSSFTFS-ILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAM 189
LF M P+ FT S +LTS P KQVHG ++ G+ S + + N++I+M
Sbjct: 146 GFCLFSSMLSHCF-PNEFTLSSVLTSCRYEP--GKQVHGLALKLGLHCS-IYVANAVISM 201
Query: 190 YGKV--GLVDY-SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQ 246
YG+ G Y +++V +K ++++WNS++ A + A+ F +M + D+
Sbjct: 202 YGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR 261
Query: 247 FTCSTLMSVCSNL---RDLDKGK------QVFAFCFKVGFVYNSIVSSAAIDLFSK-CNR 296
+TL+++CS+L DL + Q+ + K G V + V++A I ++S+
Sbjct: 262 ---ATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLED 318
Query: 297 LEDSVRLFTEQDRW-DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
D +LF E D +I+++A +D E A+HLF +E + P Y S +L
Sbjct: 319 YTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLK 377
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
+ + + + IHA V K GF +D VL ++L+H YAK G +D + +F++ +D+VS
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
WN+++ + +G+V L +F+++ + PD T A+L AC++ V+EG++IF SM
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVI 535
+ P HY V++MLS+A EA ++++ MP +W +L C HG+ ++
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 536 ETVAKEIMER-EPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKN 594
+ A ++ E EP Y+ ++ Y G + K+ME ++ SW + N
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGN 614
Query: 595 HVYTFQS 601
V+ F S
Sbjct: 615 KVHEFAS 621
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S++L C + +HA +K G T L N + Y+ G ++ ++VFDD+
Sbjct: 373 SSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDS 432
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVR-DVVSWNSMISGYASNGFSSDALELFVE 137
++ SWN LK GQ+ + +F M + D ++ +++S + G + L +F
Sbjct: 433 RDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRS 492
Query: 138 M 138
M
Sbjct: 493 M 493
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA 424
+ + H L + + +LA+ L++MYAK G I A +F+ +++VSW ++ G
Sbjct: 79 INLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYV 138
Query: 425 YNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY 460
G LF ++ P+ TL++VL +C Y
Sbjct: 139 QAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/616 (26%), Positives = 286/616 (46%), Gaps = 52/616 (8%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
LL C+S VN ++ + A L + +L + ++L G N + +F N
Sbjct: 43 LLKKCIS---VNQLRQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEEPN 95
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
S+N ++GL + WN AL L+ M+
Sbjct: 96 HYSFNYMIRGLTNT--------------------WND----------HEAALSLYRRMKF 125
Query: 141 AGMRPSSFTFS---ILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
+G++P FT++ I + + + VH + + G++ +V + +SLI MY K G V
Sbjct: 126 SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE-RDVHINHSLIMMYAKCGQVG 184
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCS 257
Y+ + + + D +SWNS++ AG+ + A+ F KM + PD+ T +++ CS
Sbjct: 185 YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACS 244
Query: 258 NLRDLDKGK--QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
+L DL G+ + A K+G ++ + S I ++ KC L+ + R+F + + D
Sbjct: 245 HLGDLRTGRLLEEMAITKKIGL--STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAW 302
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
T+MI+ Y+ + +A LF + + P +S +LS+ +E+G QI +
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
L + + +A+ LV MY K G +++AL +F +K+ +WN ++ A+ G L L
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 436 FKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
F R + P IT VL AC + V +G + F M + FG+ P EHYT ++++LS
Sbjct: 423 FD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIME-REPQAPFPYL 554
+AGML EA + +E P M IL C D+ + E + +ME +E + Y+
Sbjct: 480 RAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 555 VLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF--QSNQLQHYGGKDX 612
+ + M W+ ++R M + + GCSW ++ + F S+ LQ G +D
Sbjct: 540 ISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQ-CGREDS 598
Query: 613 XXXXXXXVWEMETEGY 628
V EM+ E Y
Sbjct: 599 GSLFDLLVEEMKRERY 614
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 47/233 (20%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
ST+L C S ++ K + H +L L Y+ +D+Y G + +AL+VF+ +
Sbjct: 338 STVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV 397
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
KN +WN +MI+ YA G + +AL LF M
Sbjct: 398 KNEATWN-------------------------------AMITAYAHQGHAKEALLLFDRM 426
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHG--RIIRSGMDLSNVVLG----NSLIAMYGK 192
+ PS TF ++S+ HA VH R + +V ++I + +
Sbjct: 427 S---VPPSDITF---IGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSR 480
Query: 193 VGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGH---HELALAHFYKMRDAE 241
G++D ++ + K D I +++ ACH+ E A+ +M++A+
Sbjct: 481 AGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAK 533
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 251/505 (49%), Gaps = 13/505 (2%)
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
L A +F+ + V WNSMI GY+++ AL + EM G P FTF +
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 156 LVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
S VHG ++++G ++ N+ + L+ MY G V+Y V + + +++
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEV-NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVV 174
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
+W SL+ A+ F +M+ + ++ L+ C +D+ GK F
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 273 FKVGF--------VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
+GF +N I++++ ID+++KC L + LF S+I+ Y+
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQ 294
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
+ E+AL +F+ L I P + ++ + I ++G IHA V K GF DA +
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
LV+MYAK G + A F + + KD ++W +++GLA +G + L +F+ + +G
Sbjct: 355 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 445 A-PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
A PD IT VL AC++ V+EG + F M G++P EHY +V++LS+AG +EA
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMM 563
+V+TMP +++W +L+ C IH +L++ + + + E E Y++L+ Y
Sbjct: 475 ERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKA 534
Query: 564 GRWESLVRVRKDMEQKCTKEFIGCS 588
GRW + +R+ M+ K + +G S
Sbjct: 535 GRWADVKLIRESMKSKRVDKVLGHS 559
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 194/443 (43%), Gaps = 61/443 (13%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C + + F VH +K G Y+ L +Y G +N L+VF+DI
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ-- 170
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
WN+ V+W S+ISG+ +N SDA+E F EMQ
Sbjct: 171 ---WNV--------------------------VAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 141 AGMRPSSFTFSILTSLVSSPCHAKQV------HGRIIRSGMDLS-------NVVLGNSLI 187
G++ + +I+ L+ + K + HG + G D NV+L SLI
Sbjct: 202 NGVKANE---TIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 188 AMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQF 247
MY K G + + + M + ++SWNS++ + G E AL F M D + PD+
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKV 318
Query: 248 TC-----STLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
T ++++ CS L G+ + A+ K GFV ++ + A +++++K E + +
Sbjct: 319 TFLSVIRASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKK 373
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFV-LTLRENIRPTEYMVSCLLSSFSIFL 361
F + ++ DT T +I A+H G +AL +F + + N P +L + S
Sbjct: 374 AFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIG 433
Query: 362 PVEVGIQIHALVPKL-GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTI 419
VE G + A + L G E +V + ++ G ++A + +K V+ W +
Sbjct: 434 LVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGAL 493
Query: 420 MMGLAYNGKVSVTLDLFKELIRE 442
+ G + + +T D + ++ E
Sbjct: 494 LNGCDIHENLELT-DRIRSMVAE 515
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 288/577 (49%), Gaps = 42/577 (7%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+T+L C S++F K VH+ +K G + + N + +Y + + DA VF++
Sbjct: 194 ATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETD- 251
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSD-ALELFVE 137
+ VRD V++N +I G A GF D +L +F +
Sbjct: 252 ----------------------------VAVRDQVTFNVVIDGLA--GFKRDESLLVFRK 281
Query: 138 MQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
M A +RP+ TF + S QVHG I++G + +V N+ + MY
Sbjct: 282 MLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLV-SNATMTMYSSFEDFG 340
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCS 257
+ V ++++ D+++WN+++ + ++A + A++ + +M + PD+FT +L++
Sbjct: 341 AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS- 399
Query: 258 NLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTS 317
DLD + V A K G +S+A I +SK ++E + LF R + +
Sbjct: 400 --LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNA 457
Query: 318 MISSYATHDLGEDALHLFVLTLRENIR--PTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
+IS + + + L F L +R P Y +S LLS + +G Q HA V +
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR 517
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDL 435
G + ++ + L++MY++ G I ++L +FN+ KD+VSWN+++ + +G+ ++
Sbjct: 518 HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNT 577
Query: 436 FKELIREG-MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEML 494
+K + EG + PD T +AVL AC++ V+EG++IF SM GV +H++ +V++L
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLL 637
Query: 495 SKAGMLKEAIDIVETMPYTI--TLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFP 552
+AG L EA +V+ TI +D+W + S C HGDL++ + VAK +ME+E P
Sbjct: 638 GRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSV 697
Query: 553 YLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
Y+ L+ Y G W+ R+ + + GCSW
Sbjct: 698 YVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSW 734
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 242/508 (47%), Gaps = 29/508 (5%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
VH + ++ GL ++++ N L LY LG++ K FD+I + SW L K G
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 97 LGNACQLFDGMPVRDVVS-WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
+ A ++FD MP RD V+ WN+MI+G +G+ ++ELF EM G+R F F+ + S
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 156 LV--SSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
+ S KQVH +I++G +++ V+ N+LI MY +V L ++ D+
Sbjct: 199 MCDYGSLDFGKQVHSLVIKAGFFIASSVV-NALITMYFNCQVV---VDACLVFEETDVAV 254
Query: 214 WNSLMWACHRAG----HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+ + + G + +L F KM +A L P T ++M CS G QV
Sbjct: 255 RDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVH 311
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
K G+ ++VS+A + ++S + ++F + D +MISSY LG+
Sbjct: 312 GLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGK 371
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
A+ ++ ++P E+ LL++ L ++V + A + K G S +++ L+
Sbjct: 372 SAMSVYKRMHIIGVKPDEFTFGSLLAT---SLDLDVLEMVQACIIKFGLSSKIEISNALI 428
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA--PD 447
Y+K G I+ A +F + K+L+SWN I+ G +NG L+ F L+ + PD
Sbjct: 429 SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPD 488
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEA 503
TL+ +L C V + S + ++ G+ T + + M S+ G ++ +
Sbjct: 489 AYTLSTLLSIC-----VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGD 531
+++ M + W ++S HG+
Sbjct: 544 LEVFNQMSEKDVVS-WNSLISAYSRHGE 570
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 45/315 (14%)
Query: 211 IISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+++ N + R+G + AL F + R L PDQ++ S ++ +LRD G QV
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD--------------------- 308
+ + G + +S VS+ + L+ + L + F E D
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 309 -----------RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
R D A+ +MI+ E ++ LF + +R ++ + +L S
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SM 199
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNET--KIKDLVS 415
+ ++ G Q+H+LV K GF + + + L+ MY ++ DA +F ET ++D V+
Sbjct: 200 CDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVT 259
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
+N ++ GLA K +L +F++++ + P +T +V+ +C+ + G ++
Sbjct: 260 FNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVH---- 311
Query: 476 TEFGVKPGEEHYTYV 490
+K G E YT V
Sbjct: 312 -GLAIKTGYEKYTLV 325
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 254/518 (49%), Gaps = 40/518 (7%)
Query: 108 PVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVH 167
P +V +N+MIS +S+ ++ L+ M + P TF L S KQ+H
Sbjct: 96 PNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIH 153
Query: 168 GRIIRSG-MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH 226
II SG + L N L NSL+ Y ++G + V M D+ S+N ++ + G
Sbjct: 154 CHIIVSGCLSLGNY-LWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 227 HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS--IVS 284
AL ++KM + PD++T +L+ C +L D+ GK V + + G VY+S I+S
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 285 SAAIDLFSKCNR-------------------------------LEDSVRLFTEQDRWDTA 313
+A +D++ KC +E + +F + + D
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 314 LCTSMISSYATHDLGEDALH--LFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA 371
S++ Y+ + + + +T+ E ++P + L+S + + G +H
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 372 LVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSV 431
LV +L + DA L+S L+ MY K GII+ A +F KD+ W +++ GLA++G
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQ 452
Query: 432 TLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVV 491
L LF + EG+ P+ +TL AVL AC++ V+EG+ +F M+ +FG P EHY +V
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLV 512
Query: 492 EMLSKAGMLKEAIDIVE-TMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP 550
++L +AG ++EA DIV+ MP + MW ILS C D++ E E+++ EP+
Sbjct: 513 DLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKE 572
Query: 551 FPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCS 588
Y++L+ Y +GRW + R+ ME + K+ G S
Sbjct: 573 GGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 177/364 (48%), Gaps = 42/364 (11%)
Query: 84 WNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGM 143
WN +K ++ G G A ++F MP DV S+N MI GYA GFS +AL+L+ +M G+
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 144 RPSSFTFSILTSLV-----SSPCHAKQVHGRIIRSG-MDLSNVVLGNSLIAMYGKV---G 194
P +T +L+ LV S K VHG I R G + SN++L N+L+ MY K G
Sbjct: 229 EPDEYT--VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 195 LVDYSF----------------------------SVILTMKKIDIISWNSLMWACHRAGH 226
L +F +V M K D++SWNSL++ + G
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Query: 227 HELALAH-FYKMRDAELL-PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
+ + FY+M E + PD+ T +L+S +N +L G+ V ++ ++ +S
Sbjct: 347 DQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
SA ID++ KC +E + +F D AL TSMI+ A H G+ AL LF E +
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQI-HALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
P + +L++ S VE G+ + + + K GF+ + +LV + + G +++A
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
Query: 404 IFNE 407
I +
Sbjct: 527 IVQK 530
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 19/300 (6%)
Query: 12 YTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLG--LNTYTYLGNRCLDLYSDLGHINDA 69
YT LS LL C + K VH + G ++ L N LD+Y A
Sbjct: 233 YTVLS----LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 70 LKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSS 129
+ FD + K+ SWN + G ++ G + A +FD MP RD+VSWNS++ GY+ G
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 130 DAL-ELFVEMQ-GAGMRPSSFTFSILTSLVSSPC------HAKQVHGRIIRSGMDLSNVV 181
+ ELF EM ++P T + SL+S H + VHG +IR + +
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVT---MVSLISGAANNGELSHGRWVHGLVIRLQLK-GDAF 404
Query: 182 LGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAE 241
L ++LI MY K G+++ +F V T + D+ W S++ G+ + AL F +M++
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF-KVGFVYNSIVSSAAIDLFSKCNRLEDS 300
+ P+ T +++ CS+ +++G VF K GF + + +DL + R+E++
Sbjct: 465 VTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA 524
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 255/501 (50%), Gaps = 25/501 (4%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G A LF RD+VSWNSMIS ++ NGF+ A LF E+ + S F+ S
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCSKFSLST 499
Query: 153 LTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI-DI 211
+ ++++S C + +++ G S+ K+G + +F + TM + D+
Sbjct: 500 VLAILTS-CDSSD-------------SLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDL 545
Query: 212 ISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
SWNS++ C +GHH +L F M R+ ++ D T +S NL + +G+
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHG 605
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT--SMISSYATHDLG 328
K ++ + + I ++ +C +E +V++F D LC+ +IS+ + + G
Sbjct: 606 LAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS--DPNLCSWNCVISALSQNKAG 663
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
+ LF + P E LLS+ + G+Q H + + GF+++ +++ L
Sbjct: 664 REVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 720
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG-MAPD 447
V MY+ G+++ + +F + + + +WN+++ ++G ++LFKEL M P+
Sbjct: 721 VDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPN 780
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
+ + ++L AC++ F+DEG+ + ME +FGVKP EH ++V+ML +AG L+EA + +
Sbjct: 781 KSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFI 840
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
+ +W +LS C HGD ++ + VA+ + E EP Y+ LA Y +G WE
Sbjct: 841 TGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWE 900
Query: 568 SLVRVRKDMEQKCTKEFIGCS 588
VR+RK +E K+ G S
Sbjct: 901 EAVRLRKMVEDNALKKLPGYS 921
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 219/460 (47%), Gaps = 30/460 (6%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
++G+L ++ LFD + +DV+ WNSMI+ NG A+ LF+EM G S T +
Sbjct: 134 RTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLL 193
Query: 153 LTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
S +SS +++ +H I +G+ + + L N+L+ +Y K + + V M+
Sbjct: 194 AASALSSLHLSRKCSMLHCLAIETGL-VGDSSLCNALMNLYAKGENLSSAECVFTHMEHR 252
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
DI+SWN++M C GH +L +F M + D T S ++S CS++ +L G+ +
Sbjct: 253 DIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLH 312
Query: 270 AFCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
K G+ + VS ++ I ++SKC E + +F E D ++++ +A + +
Sbjct: 313 GLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGM 372
Query: 328 GEDALHLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV-LA 385
E+A + + + I+P V + S G +H ++ +S A+ +
Sbjct: 373 FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI 432
Query: 386 STLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
++++ MY K G+ A +F T +DLVSWN+++ + NG +LFKE++ E +
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YS 491
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID 505
+ +L+ VL I S ++ + G+ + + L K G L A
Sbjct: 492 CSKFSLSTVL-------------AILTSCDSSDSLIFGKSVHCW----LQKLGDLTSAFL 534
Query: 506 IVETMPYTITLDMWRLILSVCVIHG----DLQVIETVAKE 541
+ETM T L W ++S C G L+ + +++E
Sbjct: 535 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSRE 574
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 184/384 (47%), Gaps = 27/384 (7%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K L +A +F M RD+VSWN++++ +NG +L+ F M G+G + TFS
Sbjct: 235 KGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSC 294
Query: 153 LTSLVSSPCH---AKQVHGRIIRSGMDL-SNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+ S SS + +HG +I+SG ++V +GNS+I+MY K G + + +V +
Sbjct: 295 VISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D+IS N+++ G E A +M+ + + PD T ++ S+C +L +G+
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 268 VFAFCFKVGFVYNSI-VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
V + ++ ++ V ++ ID++ KC + LF D SMIS+++ +
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
A +LF +E + +EY SC S S L + SD+++
Sbjct: 475 FTHKAKNLF----KEVV--SEY--SCSKFSLSTVLAILTSCD----------SSDSLIFG 516
Query: 387 TLVHMY-AKFGIIDDA-LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG- 443
VH + K G + A L + ++ +DL SWN+++ G A +G +L F+ + REG
Sbjct: 517 KSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGK 576
Query: 444 MAPDRITLAAVLLACNYGSFVDEG 467
+ D ITL + A V +G
Sbjct: 577 IRHDLITLLGTISASGNLGLVLQG 600
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 175/392 (44%), Gaps = 7/392 (1%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
+ VH ++ G+ L ++ + L+ YG+ G + S + +K+ D+I WNS++ A ++
Sbjct: 107 RSVHCFALKCGL-LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQ 165
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
G + A+ F +M D T S S+L K + + G V +S +
Sbjct: 166 NGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
+A ++L++K L + +FT + D ++++ + +L F
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDA--VLASTLVHMYAKFGIIDDA 401
SC++S+ S + +G +H LV K G+ +A + ++++ MY+K G + A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 402 LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR-EGMAPDRITLAAVLLACNY 460
+F E +D++S N I+ G A NG + ++ + + PD T+ ++ C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 461 GSFVDEGIKIF-FSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMW 519
SF EG + +++ E + E V++M K G+ +A + +T + L W
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSR-ALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSW 463
Query: 520 RLILSVCVIHGDLQVIETVAKEIMEREPQAPF 551
++S +G + + KE++ + F
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKF 495
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 50 TYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPV 109
T L N + +Y I A+KVF IS N SWN
Sbjct: 616 TQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNC----------------------- 652
Query: 110 RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL---VSSPCHAKQV 166
+IS + N + +LF ++ + P+ TF L S + S + Q
Sbjct: 653 --------VISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQA 701
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH 226
H +IR G +N + +L+ MY G+++ V I +WNS++ A G
Sbjct: 702 HCHLIRRGFQ-ANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGM 760
Query: 227 HELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKG 265
E A+ F ++ ++E+ P++ + +L+S CS+ +D+G
Sbjct: 761 GEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
+L SF + E +H K G D +S L+ Y + G + + +F+E K KD
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
++ WN+++ L NG+ + LF E+I +G
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKG 183
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 164/661 (24%), Positives = 310/661 (46%), Gaps = 75/661 (11%)
Query: 8 TQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKL----GLNTYTYLGNRCLDLYSDL 63
T P + + +T+L+ KS+N +K +HAH L+ LN++ + L + S
Sbjct: 2 TLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFN----LSVSSSS 57
Query: 64 GHINDALKVFDDI-SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGY 122
+++ AL VF I S S +N L+ L +S + A LF
Sbjct: 58 INLSYALNVFSSIPSPPESIVFNPFLRDLSRSSE-PRATILF------------------ 98
Query: 123 ASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIRSGMDLSN 179
+ ++ G R F+F IL ++ VS+ ++HG + L +
Sbjct: 99 ------------YQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT-LCD 145
Query: 180 VVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRD 239
+ + MY G ++Y+ +V M D+++WN+++ R G + A F +M+D
Sbjct: 146 PFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD 205
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC--------------------------- 272
+ ++PD+ ++S C ++ + ++ F
Sbjct: 206 SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDM 265
Query: 273 ----FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
F+ V N VS+A + +SKC RL+D+ +F + ++ D T+MIS+Y D
Sbjct: 266 AREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYP 325
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
++AL +F I+P + ++S+ + ++ +H+ + G ES+ + + L
Sbjct: 326 QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNAL 385
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
++MYAK G +D +F + +++VSW++++ L+ +G+ S L LF + +E + P+
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNE 445
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
+T VL C++ V+EG KIF SM E+ + P EHY +V++ +A +L+EA++++E
Sbjct: 446 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
Query: 509 TMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWES 568
+MP + +W ++S C IHG+L++ + AK I+E EP ++++ Y RWE
Sbjct: 506 SMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWED 565
Query: 569 LVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGY 628
+ +R+ ME+K + G S + F +H + V +++ GY
Sbjct: 566 VRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGY 625
Query: 629 V 629
V
Sbjct: 626 V 626
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 263/541 (48%), Gaps = 16/541 (2%)
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
++ +A ++FD MP +D + WN+MISGY N +++++F ++ + S T
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL----INESCTRLDTTTL 224
Query: 156 LVSSPCHAK--------QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
L P A+ Q+H ++G + VL I++Y K G + ++ +
Sbjct: 225 LDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCGKIKMGSALFREFR 283
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
K DI+++N+++ G EL+L+ F ++ L + STL+S+ L
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLF---KELMLSGARLRSSTLVSLVPVSGHLMLIYA 340
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ +C K F+ ++ VS+A ++SK N +E + +LF E +MIS Y + L
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
EDA+ LF + P ++C+LS+ + + +G +H LV FES +++
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
L+ MYAK G I +A +F+ K+ V+WNT++ G +G+ L++F E++ G+ P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
+T VL AC++ V EG +IF SM +G +P +HY +V++L +AG L+ A+ +
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
E M +W +L C IH D + TV++++ E +P +++L+ + +
Sbjct: 581 EAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 568 SLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEG 627
VR+ +++ + G + + + F S H K+ +M G
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Query: 628 Y 628
Y
Sbjct: 701 Y 701
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 224/526 (42%), Gaps = 54/526 (10%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+T LD S++ + HA + G L + SDLG I A +F +
Sbjct: 21 NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR 80
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
DV +N ++ G++ N +L +F +
Sbjct: 81 P-------------------------------DVFLFNVLMRGFSVNESPHSSLSVFAHL 109
Query: 139 QGA-GMRPSSFTFSILTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
+ + ++P+S T++ S S + +HG+ + G D S ++LG++++ MY K
Sbjct: 110 RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD-SELLLGSNIVKMYFKFW 168
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP-DQFTCSTLM 253
V+ + V M + D I WN+++ + + ++ F + + D T ++
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
+ L++L G Q+ + K G + V + I L+SKC +++ LF E + D
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+MI Y ++ E +L LF + R S L+S + + + IH
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGAR---LRSSTLVSLVPVSGHLMLIYAIHGYC 345
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
K F S A +++ L +Y+K I+ A +F+E+ K L SWN ++ G NG +
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 434 DLFKELIREGMAPDRITLAAVLLAC------NYGSFVDEGIKIFFSMETEFGVKPGEEHY 487
LF+E+ + +P+ +T+ +L AC + G +V + ++ S + E +
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR---STDFESSIYVS---- 458
Query: 488 TYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQ 533
T ++ M +K G + EA + + M + W ++S +HG Q
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHGQGQ 503
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H + LK ++ + +YS L I A K+FD+ K+ SWN
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN----------- 389
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+MISGY NG + DA+ LF EMQ + P+ T + + S
Sbjct: 390 --------------------AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 157 ---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
+ + K VH ++RS S++ + +LI MY K G + + + M K + ++
Sbjct: 430 CAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF-AFC 272
WN+++ G + AL FY+M ++ + P T ++ CS+ + +G ++F +
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
+ GF + + +D+ + L+ +++
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 167/645 (25%), Positives = 301/645 (46%), Gaps = 76/645 (11%)
Query: 38 HAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQL 97
H +K G N+ ++LYS G + +A VFD++ +N SWN + +K +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 98 GNACQLFDGMPV-RDVVSWNSMISGYA-SNGFSSDALELFVEM---QGAGMRPSSFTFSI 152
A +LF+ RD++++N+++SG+A ++G S+A+E+F EM + + FT +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 153 LTSL---VSSPCHAKQVHGRIIRSGMD---------------------LSNVVLG----- 183
+ L +++ + +Q+HG ++++G D + N+ G
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 184 ------NSLIAMYGKVGLVDYSFSVILTMKKI-DIISWNSLMWACHRAGHHELALAHFYK 236
N++IA Y + G +D + SV ++ D ISWN+L+ + G+ E AL
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 237 MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNR 296
M + L D+ + +++V S+L+ L GK+V A K G N VSS +D++ KC
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 297 LE-------------------------------DSVRLFTEQDRWDTALCTSMISSYATH 325
++ ++ RLF + + T+M Y
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 326 DLGEDALHLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
+ L L E P ++ +L + S+ +E G +IH + G D L
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
+ V MY+K G ++ A IF+ + +D V +N ++ G A++G + + F+++ G
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGF 490
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
PD IT A+L AC + V EG K F SM + + P HYT ++++ KA L +AI
Sbjct: 491 KPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAI 550
Query: 505 DIVETMPYTITLDMWRL--ILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQM 562
+++E + + D L L+ C + + ++++ V ++++ E Y+ +A AY
Sbjct: 551 ELMEGID-QVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYAS 609
Query: 563 MGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHY 607
GRW+ + R+R M K + F GCSW + + F S+ + HY
Sbjct: 610 SGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHY 654
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 12/291 (4%)
Query: 27 SQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNI 86
S KS+ K VHA LK G + ++ + +D+Y G++ A N S +
Sbjct: 272 SLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASS 331
Query: 87 CLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE-MQGAGMRP 145
+ G G++ A +LFD + +++V W +M GY + LEL + P
Sbjct: 332 MIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTP 391
Query: 146 SSFTF-SIL--TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSV 202
S S+L SL + K++HG +R+G+ L + L + + MY K G V+Y+ +
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI-LMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 203 ILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDL 262
+ + D + +N+++ C GH + HF M + PD+ T L+S C + +
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLV 510
Query: 263 DKGKQVFAFCFKVGFVYNSIVSSA----AIDLFSKCNRLEDSVRLFTEQDR 309
+G++ F + YN + IDL+ K RL+ ++ L D+
Sbjct: 511 LEGEKYFKSMIE---AYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQ 558
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 267/548 (48%), Gaps = 37/548 (6%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTFSIL 153
G+L +A ++FD M R+VVSW SMI GYA F+ DA++LF M + + P+S T +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 154 TSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
S + ++V+ I SG++++++++ ++L+ MY K +D + + +
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
+ N++ R G AL F M D+ + PD+ + + +S CS LR++ GK
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGED 330
+ + GF + +A ID++ KC+R + + R+F S+++ Y + +
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEV--------GIQ-------------- 368
A F +NI ++S L+ +EV G+
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 369 ----------IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNT 418
I+ + K G + D L +TLV M+++ G + A+ IFN +D+ +W
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 419 IMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEF 478
+ +A G ++LF ++I +G+ PD + L AC++G V +G +IF+SM
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 479 GVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETV 538
GV P + HY +V++L +AG+L+EA+ ++E MP +W +L+ C + G++++
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 539 AKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYT 598
A++I P+ Y++L+ Y GRW + +VR M++K ++ G S ++ +
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 599 FQSNQLQH 606
F S H
Sbjct: 722 FTSGDESH 729
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 197/370 (53%), Gaps = 9/370 (2%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI-LTSLVSSPCHAK--QVHGRII 171
+NS+I GYAS+G ++A+ LF+ M +G+ P +TF L++ S Q+HG I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 172 RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELAL 231
+ G ++ + NSL+ Y + G +D + V M + +++SW S++ R + A+
Sbjct: 162 KMGY-AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 232 AHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
F++M RD E+ P+ T ++S C+ L DL+ G++V+AF G N ++ SA +D+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 291 FSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMV 350
+ KCN ++ + RLF E + LC +M S+Y L +AL +F L + +RP +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 351 SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI 410
+SS S + G H V + GFES + + L+ MY K D A IF+
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 411 KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
K +V+WN+I+ G NG+V + F+ + + + ++ ++ GS +E I++
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEV 456
Query: 471 FFSMETEFGV 480
F SM+++ GV
Sbjct: 457 FCSMQSQEGV 466
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 155/302 (51%), Gaps = 19/302 (6%)
Query: 13 TSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKV 72
+++S CS L +++ + K H + L+ G ++ + N +D+Y + A ++
Sbjct: 342 SAISSCSQL-------RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 73 FDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL 132
FD +S+K +WN + G +++G++ A + F+ MP +++VSWN++ISG +A+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 133 ELFVEMQGA-GMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNS 185
E+F MQ G+ T + S+ S+ H AK ++ I ++G+ L +V LG +
Sbjct: 455 EVFCSMQSQEGVNADGVT---MMSIASACGHLGALDLAKWIYYYIEKNGIQL-DVRLGTT 510
Query: 186 LIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPD 245
L+ M+ + G + + S+ ++ D+ +W + + A AG+ E A+ F M + L PD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 246 QFTCSTLMSVCSNLRDLDKGKQVFAFCFKV-GFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
++ CS+ + +GK++F K+ G + +DL + LE++V+L
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 305 TE 306
+
Sbjct: 631 ED 632
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 267/548 (48%), Gaps = 37/548 (6%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTFSIL 153
G+L +A ++FD M R+VVSW SMI GYA F+ DA++LF M + + P+S T +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 154 TSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
S + ++V+ I SG++++++++ ++L+ MY K +D + + +
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
+ N++ R G AL F M D+ + PD+ + + +S CS LR++ GK
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGED 330
+ + GF + +A ID++ KC+R + + R+F S+++ Y + +
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEV--------GIQ-------------- 368
A F +NI ++S L+ +EV G+
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 369 ----------IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNT 418
I+ + K G + D L +TLV M+++ G + A+ IFN +D+ +W
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 419 IMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEF 478
+ +A G ++LF ++I +G+ PD + L AC++G V +G +IF+SM
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 479 GVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETV 538
GV P + HY +V++L +AG+L+EA+ ++E MP +W +L+ C + G++++
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 539 AKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYT 598
A++I P+ Y++L+ Y GRW + +VR M++K ++ G S ++ +
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 599 FQSNQLQH 606
F S H
Sbjct: 722 FTSGDESH 729
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 197/371 (53%), Gaps = 9/371 (2%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI-LTSLVSSPCHAK--QVHGRII 171
+NS+I GYAS+G ++A+ LF+ M +G+ P +TF L++ S Q+HG I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 172 RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELAL 231
+ G ++ + NSL+ Y + G +D + V M + +++SW S++ R + A+
Sbjct: 162 KMGY-AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 232 AHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
F++M RD E+ P+ T ++S C+ L DL+ G++V+AF G N ++ SA +D+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 291 FSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMV 350
+ KCN ++ + RLF E + LC +M S+Y L +AL +F L + +RP +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 351 SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI 410
+SS S + G H V + GFES + + L+ MY K D A IF+
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 411 KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
K +V+WN+I+ G NG+V + F+ + + + ++ ++ GS +E I++
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEV 456
Query: 471 FFSMETEFGVK 481
F SM+++ GV
Sbjct: 457 FCSMQSQEGVN 467
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 155/302 (51%), Gaps = 19/302 (6%)
Query: 13 TSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKV 72
+++S CS L +++ + K H + L+ G ++ + N +D+Y + A ++
Sbjct: 342 SAISSCSQL-------RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 73 FDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL 132
FD +S+K +WN + G +++G++ A + F+ MP +++VSWN++ISG +A+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 133 ELFVEMQGA-GMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNS 185
E+F MQ G+ T + S+ S+ H AK ++ I ++G+ L +V LG +
Sbjct: 455 EVFCSMQSQEGVNADGVT---MMSIASACGHLGALDLAKWIYYYIEKNGIQL-DVRLGTT 510
Query: 186 LIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPD 245
L+ M+ + G + + S+ ++ D+ +W + + A AG+ E A+ F M + L PD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 246 QFTCSTLMSVCSNLRDLDKGKQVFAFCFKV-GFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
++ CS+ + +GK++F K+ G + +DL + LE++V+L
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 305 TE 306
+
Sbjct: 631 ED 632
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 154/642 (23%), Positives = 275/642 (42%), Gaps = 103/642 (16%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
HA LK G Y+ + + YS+ NDA V I
Sbjct: 37 AHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI-------------------- 76
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
P + S++S+I + ++ +F M G+ P S L +
Sbjct: 77 -----------PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV 125
Query: 157 ---VSSPCHAKQVHGRIIRSGMDL------------------------------SNVVLG 183
+S+ KQ+H SG+D+ +VV
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 184 NSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELALAHFYKMRD 239
++L+ Y + G ++ ++ M+ + +I+SWN ++ +R+G+H+ A+ F K+
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 299
PDQ T S+++ + L+ G+ + + K G + + V SA ID++ K +
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 300 SVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVL---------------------- 337
+ LF + + + +C + I+ + + L + AL +F L
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 338 ---------TLRE----NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
RE ++P + +L + + G H ++ + +
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
S L+ MYAK G I+ + +FN K+LV WN++M G + +GK + +F+ L+R +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
PD I+ ++L AC DEG K F M E+G+KP EHY+ +V +L +AG L+EA
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMG 564
D+++ MP+ +W +L+ C + ++ + E A+++ EP+ P Y++L+ Y G
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKG 605
Query: 565 RWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
W + +R ME K+ GCSW +KN VYT + H
Sbjct: 606 MWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSH 647
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/541 (22%), Positives = 217/541 (40%), Gaps = 94/541 (17%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
L C + K +H GL+ ++ +Y G + DA KVFD +S K
Sbjct: 121 NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK 180
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELF 135
+ + + L + G L ++ M ++VSWN ++SG+ +G+ +A+ +F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 136 VEMQGAGMRPSSFTF-SILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
++ G P T S+L S+ S + +HG +I+ G+ L + + +++I MYGK
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL-LKDKCVISAMIDMYGK 299
Query: 193 V-------------------------------GLVDYSFSVILTMK----KIDIISWNSL 217
GLVD + + K +++++SW S+
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 218 MWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF 277
+ C + G AL F +M+ A + P+ T +++ C N+ L G+ F +V
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 278 VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVL 337
+ N V SA ID+++KC R+ S +F + S+++ ++ H ++ + +F
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 338 TLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGI 397
+R ++P D + ++L+ + G+
Sbjct: 480 LMRTRLKP-----------------------------------DFISFTSLLSACGQVGL 504
Query: 398 IDDALHIFN----ETKIKDLVSWNTIMMG-LAYNGKVSVTLDLFKELIREGMAPDRITLA 452
D+ F E IK + + M+ L GK+ DL KE+ E PD
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWG 561
Query: 453 AVLLACNYGSFVDE---GIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
A+L +C + VD + F +E E PG Y + + + GM E I
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPE---NPGT--YVLLSNIYAAKGMWTEVDSIRNK 616
Query: 510 M 510
M
Sbjct: 617 M 617
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S++L + +N +++H + +K GL + + +D+Y GH+ + +F+
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALEL 134
+ N + GL ++G + A ++F+ + +VVSW S+I+G A NG +ALEL
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 135 FVEMQGAGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYG 191
F EMQ AG++P+ T S+L + +++ H + HG +R + L NV +G++LI MY
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL-LDNVHVGSALIDMYA 434
Query: 192 KVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
K G ++ S V M +++ WNSLM G + ++ F + L PD + ++
Sbjct: 435 KCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 252 LMSVCSNLRDLDKGKQVFA-FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
L+S C + D+G + F + G S ++L + +L+++ L E
Sbjct: 495 LLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 187/460 (40%), Gaps = 79/460 (17%)
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
Q H RI++SG ++ + LIA Y + + V+ ++ I S++SL++A +A
Sbjct: 36 QAHARILKSGAQ-NDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
++ F +M L+PD L VC+ L GKQ+ G ++ V
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL------------ 332
+ ++ +C R+ D+ ++F D C++++ +YA E+ +
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 333 ------------------HLFVLTLRENIR-----PTEYMVSCLLSSFSIFLPVEVGIQI 369
H + + + I P + VS +L S + +G I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 370 HALVPKLGFESDAVLASTLVHMYAKF-------------------------------GII 398
H V K G D + S ++ MY K G++
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 399 DDALHIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAV 454
D AL +F +T ++VSW +I+ G A NGK L+LF+E+ G+ P+ +T+ ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 455 LLACNYGSFVDEGIKIF-FSMETEF--GVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
L AC + + G F++ V G + +++M +K G + + + MP
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVG----SALIDMYAKCGRINLSQIVFNMMP 450
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPF 551
T L W +++ +HG + + ++ + +M + F
Sbjct: 451 -TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/597 (26%), Positives = 279/597 (46%), Gaps = 45/597 (7%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
++LL C + + H+ +K L ++GN +D+Y+
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA----------------- 474
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
K G L +A Q+F+ M RD V+WN++I Y + S+A +LF M
Sbjct: 475 --------------KCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 139 QGAGMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
G+ + L S + + H KQVH ++ G+D ++ G+SLI MY K
Sbjct: 521 NLCGIVSDG---ACLASTLKACTHVHGLYQGKQVHCLSVKCGLD-RDLHTGSSLIDMYSK 576
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
G++ + V ++ + ++S N+L+ A + + E A+ F +M + P + T +T+
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSMNALI-AGYSQNNLEEAVVLFQEMLTRGVNPSEITFATI 635
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNS-IVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
+ C L G Q K GF + + + ++ + ++ LF+E
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 312 T-ALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
+ L T M+S ++ + E+AL + + + P + +L S+ + G IH
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKV 429
+L+ L + D + ++TL+ MYAK G + + +F+E + + ++VSWN+++ G A NG
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
L +F + + + PD IT VL AC++ V +G KIF M ++G++ +H
Sbjct: 816 EDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVAC 875
Query: 490 VVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQA 549
+V++L + G L+EA D +E +W +L C IHGD E A++++E EPQ
Sbjct: 876 MVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQN 935
Query: 550 PFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
Y++L+ Y G WE +RK M + K+ G SW ++ + F + H
Sbjct: 936 SSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSH 992
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 228/482 (47%), Gaps = 46/482 (9%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S +L C + +V F + +H +K+GL +Y G +D+Y+ I+DA +VF+ I
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 79 KNSTSWNICLKGLLKSG-----------------------------------QLGNACQL 103
N+ W G +K+G +L +A L
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL 283
Query: 104 FDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSL--VSSP 160
F M DVV+WN MISG+ G + A+E F M+ + ++ + T S+L+++ V++
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 161 CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWA 220
VH I+ G+ SN+ +G+SL++MY K ++ + V +++ + + WN+++
Sbjct: 344 DLGLVVHAEAIKLGL-ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 221 CHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYN 280
G + F M+ + D FT ++L+S C+ DL+ G Q + K N
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 281 SIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLR 340
V +A +D+++KC LED+ ++F D ++I SY + +A LF R
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK---R 519
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVE---VGIQIHALVPKLGFESDAVLASTLVHMYAKFGI 397
N+ +CL S+ V G Q+H L K G + D S+L+ MY+K GI
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 398 IDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
I DA +F+ +VS N ++ G + N + + LF+E++ G+ P IT A ++ A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 458 CN 459
C+
Sbjct: 639 CH 640
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 232/494 (46%), Gaps = 39/494 (7%)
Query: 36 IVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSG 95
+VHA +KLGL + Y+G+ + +YS + A KVF+ + KN WN
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN---------- 397
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
+MI GYA NG S +ELF++M+ +G FTF+ L S
Sbjct: 398 ---------------------AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 156 LVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
++ Q H II+ + N+ +GN+L+ MY K G ++ + + M D +
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKL-AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
+WN+++ + + + A F +M ++ D ++ + C+++ L +GKQV
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
K G + S+ ID++SKC ++D+ ++F+ W ++I+ Y+ ++L E+A+
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAV 614
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDA-VLASTLVHM 391
LF L + P+E + ++ + + +G Q H + K GF S+ L +L+ M
Sbjct: 615 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGM 674
Query: 392 YAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT 450
Y + +A +F+E + K +V W +M G + NG L +KE+ +G+ PD+ T
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 451 LAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
VL C+ S + EG + S+ E +++M +K G +K + + + M
Sbjct: 735 FVTVLRVCSVLSSLREG-RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 511 PYTITLDMWRLILS 524
+ W +++
Sbjct: 794 RRRSNVVSWNSLIN 807
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 204/479 (42%), Gaps = 72/479 (15%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K VH+ L LG+++ LGN +DLY+ ++ A K FD +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE----------------- 122
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
+DV +WNSM+S Y+S G L FV + + P+ FTFSI+
Sbjct: 123 ---------------KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVL 167
Query: 155 SLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
S + + +Q+H +I+ G++ N G +L+ MY K + + V + +
Sbjct: 168 STCARETNVEFGRQIHCSMIKMGLE-RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
+ W L +AG E A+ F +MRD PD T+
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------------------- 267
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
I+ + + +L+D+ LF E D MIS + A
Sbjct: 268 ----------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
+ F + +++ T + +LS+ I +++G+ +HA KLG S+ + S+LV M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
Y+K ++ A +F + K+ V WN ++ G A+NG+ ++LF ++ G D T
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
++L C ++ G + F S+ + + +V+M +K G L++A I E M
Sbjct: 432 TSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 156/348 (44%), Gaps = 38/348 (10%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
K VH + + G+D S LGN+++ +Y K V Y+ ++K D+ +WNS++
Sbjct: 79 GKAVHSKSLILGID-SEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYS 136
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
G L F + + ++ P++FT S ++S C+ +++ G+Q+ K+G NS
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 283 VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLREN 342
A +D+++KC+R+ D+ R+F +T T + S Y L E+A+ +F E
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 343 IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDAL 402
RP D + T+++ Y + G + DA
Sbjct: 257 HRP-----------------------------------DHLAFVTVINTYIRLGKLKDAR 281
Query: 403 HIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGS 462
+F E D+V+WN ++ G G +V ++ F + + + R TL +VL A +
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 463 FVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+D G+ + + + G+ + +V M SK ++ A + E +
Sbjct: 342 NLDLGL-VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 361 LPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIM 420
L + +G +H+ LG +S+ L + +V +YAK + A F+ + KD+ +WN+++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSML 132
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGV 480
+ GK L F L + P++ T + VL C + V+ G +I SM +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----I 187
Query: 481 KPGEEHYTY----VVEMLSKAGMLKEAIDIVETM--PYTITLDMWRLILSVCVIHGDLQV 534
K G E +Y +V+M +K + +A + E + P T+ W + S V G L
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC---WTCLFSGYVKAG-LPE 243
Query: 535 IETVAKEIMEREPQAP--FPYLVLAQAYQMMGR 565
+ E M E P ++ + Y +G+
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 252/494 (51%), Gaps = 14/494 (2%)
Query: 115 WNSMISGYASNGFSSDALELFV---EMQGAGMRPSSFTFSILTSLV-----SSPCHAKQV 166
W+S+I G+ S G + + F+ M+ G+ PS TF L V S+P Q
Sbjct: 70 WDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF---QF 125
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH 226
H I++ G+D S+ + NSLI+ Y GL D++ + + D+++W +++ R G
Sbjct: 126 HAHIVKFGLD-SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 227 HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI-VSS 285
A+ +F +M+ + ++ T +++ + D+ G+ V + G V + + S
Sbjct: 185 ASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGS 244
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP 345
+ +D++ KC+ +D+ ++F E + T++I+ Y + + +F L+ ++ P
Sbjct: 245 SLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
E +S +LS+ + + G ++H + K E + +TL+ +Y K G +++A+ +F
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 406 NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVD 465
K++ +W ++ G A +G DLF ++ ++P+ +T AVL AC +G V+
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Query: 466 EGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSV 525
EG ++F SM+ F ++P +HY +V++ + G+L+EA ++E MP T +W +
Sbjct: 425 EGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGS 484
Query: 526 CVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFI 585
C++H D ++ + A +++ +P Y +LA Y W+ + RVRK M+ + +
Sbjct: 485 CLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSP 544
Query: 586 GCSWFGMKNHVYTF 599
G SW +K + F
Sbjct: 545 GFSWIEVKGKLCEF 558
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 178/368 (48%), Gaps = 35/368 (9%)
Query: 38 HAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQL 97
HAH +K GL++ ++ N + YS SG
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSS-------------------------------SGLF 154
Query: 98 GNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT-FSILTSL 156
A +LFDG +DVV+W +MI G+ NG +S+A+ FVEM+ G+ + T S+L +
Sbjct: 155 DFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 157 --VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISW 214
V + VHG + +G +V +G+SL+ MYGK D + V M ++++W
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTW 274
Query: 215 NSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
+L+ ++ + + F +M +++ P++ T S+++S C+++ L +G++V + K
Sbjct: 275 TALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK 334
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
N+ + IDL+ KC LE+++ +F + T+MI+ +A H DA L
Sbjct: 335 NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDL 394
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH-ALVPKLGFESDAVLASTLVHMYA 393
F L ++ P E +LS+ + VE G ++ ++ + E A + +V ++
Sbjct: 395 FYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFG 454
Query: 394 KFGIIDDA 401
+ G++++A
Sbjct: 455 RKGLLEEA 462
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 55/249 (22%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S++L C +++ + VH + +K + T G +DLY G + +A+ VF+ +
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE 369
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
KN V +W +MI+G+A++G++ DA +LF M
Sbjct: 370 KN-------------------------------VYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGN-----------SLI 187
+ + P+ TF V S C HG ++ G L + G ++
Sbjct: 399 LSSHVSPNEVTFMA----VLSAC----AHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 188 AMYGKVGLVDYSFSVI--LTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPD 245
++G+ GL++ + ++I + M+ +++ W +L +C H + L + R +L P
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVV-WGALFGSC--LLHKDYELGKYAASRVIKLQPS 507
Query: 246 QFTCSTLMS 254
TL++
Sbjct: 508 HSGRYTLLA 516
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 281/546 (51%), Gaps = 37/546 (6%)
Query: 66 INDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASN 125
+ +A K+FD++ ++S SWN + G K+ ++G A LF+ MP R+ VSW++MI+G+ N
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQN 180
Query: 126 GFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV-----HGRIIRSGMDLSNV 180
G A+ LF +M ++ SS +++ L+ + ++ +G ++ DL V
Sbjct: 181 GEVDSAVVLFRKMP---VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL--V 235
Query: 181 VLGNSLIAMYGKVGLVDYSFSVILTMKKI---------------DIISWNSLMWACHRAG 225
N+LI YG+ G V+ + + + + +++SWNS++ A + G
Sbjct: 236 YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVG 295
Query: 226 HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA-FCFKVGFVYNSIVS 284
A F +M+D D + +T++ ++ ++ +F+ + +N +VS
Sbjct: 296 DVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVS 351
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
++ +E + F + T S+I++Y + ++A+ LF+ E +
Sbjct: 352 G-----YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
P + ++ LLS+ + + + +G+Q+H +V K D + + L+ MY++ G I ++ I
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRI 465
Query: 405 FNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
F+E K+K ++++WN ++ G A++G S L+LF + G+ P IT +VL AC +
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGL 525
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
VDE F SM + + ++P EHY+ +V + S G +EA+ I+ +MP+ +W +L
Sbjct: 526 VDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALL 585
Query: 524 SVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKE 583
C I+ ++ + A+ + EP++ PY++L Y MG W+ +VR +ME K K+
Sbjct: 586 DACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKK 645
Query: 584 FIGCSW 589
G SW
Sbjct: 646 ERGSSW 651
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N +D Y + + DA +F ++ ++++ SWN+ + G G + A F+ P + V
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAK---QVHGRI 170
SWNS+I+ Y N +A++LF+ M G +P T + L S + + + Q+H +
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 171 IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHEL 229
+++ + +V + N+LI MY + G + S + MK K ++I+WN+++ G+
Sbjct: 436 VKTV--IPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASE 493
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
AL F M+ + P T ++++ C++ +D+ K F
Sbjct: 494 ALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQF 533
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 158/378 (41%), Gaps = 49/378 (12%)
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG 225
R I ++ N V N++I+ Y K ++ + + M K D+++WN+++ G
Sbjct: 57 AEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCG 116
Query: 226 HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
L K+ D D F+ +T++S + R + + +F + N++ S
Sbjct: 117 GIRF-LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPE----RNAVSWS 171
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTA-LCTSMISSYATHDLGEDALHL----FVLTLR 340
A I F + ++ +V LF + D++ LC + L E A L +++ R
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL-----------GFESDAVLASTLV 389
E++ Y + L+ + VE + +P L F + V ++++
Sbjct: 232 EDL---VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
Y K G + A +F++ K +D +SWNT++ G + ++ LF E+ P+R
Sbjct: 289 KAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNRD 342
Query: 450 TLAAVLLACNYGSFVD-EGIKIFFSMETEFGVKPGEEH---YTYVVEMLSKAGMLKEAID 505
+ ++ Y S + E + +F K E+H + ++ K KEA+D
Sbjct: 343 AHSWNMMVSGYASVGNVELARHYFE-------KTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 506 IVETM--------PYTIT 515
+ M P+T+T
Sbjct: 396 LFIRMNIEGEKPDPHTLT 413
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/603 (26%), Positives = 273/603 (45%), Gaps = 68/603 (11%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+HA + + +L ++ + Y+ AL VFD+I+ +N+ S+N L
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS-ILTS 155
+A LF +SW S+ +SSDA RP S + S +L +
Sbjct: 104 YFDAFSLF--------LSW------IGSSCYSSDA-----------ARPDSISISCVLKA 138
Query: 156 LVSSPCH-------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
L S C A+QVHG +IR G D S+V +GN +I Y K ++ + V M +
Sbjct: 139 L--SGCDDFWLGSLARQVHGFVIRGGFD-SDVFVGNGMITYYTKCDNIESARKVFDEMSE 195
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRD-AELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D++SWNS++ ++G E + M ++ P+ T ++ C DL G +
Sbjct: 196 RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
V + + + +A I ++KC L+ + LF E D+ ++IS Y H L
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGL 315
Query: 328 GEDALHLF---------------------------VLTLRENI----RPTEYMVSCLLSS 356
++A+ LF + + RE I RP +S LL S
Sbjct: 316 VKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPS 375
Query: 357 FSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSW 416
+ ++ G +IHA + G +++ + ++++ YAK G + A +F+ K + L++W
Sbjct: 376 LTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAW 435
Query: 417 NTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMET 476
I+ A +G LF ++ G PD +TL AVL A + D IF SM T
Sbjct: 436 TAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT 495
Query: 477 EFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIE 536
++ ++PG EHY +V +LS+AG L +A++ + MP +W +L+ + GDL++
Sbjct: 496 KYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIAR 555
Query: 537 TVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHV 596
+ E EP+ Y ++A Y GRWE VR M++ K+ G SW + +
Sbjct: 556 FACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGL 615
Query: 597 YTF 599
+F
Sbjct: 616 RSF 618
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 175/424 (41%), Gaps = 66/424 (15%)
Query: 160 PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMW 219
P H Q+H RI+ + N L + LI+ Y + + V + + S+N+L+
Sbjct: 38 PLHVLQLHARIVVFSIKPDNF-LASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLI 96
Query: 220 ACHRAGHHELALAHF--------YKMRDAELLPDQFTCSTLMSVCSNLRDLDKG---KQV 268
A + A + F Y A PD + S ++ S D G +QV
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAAR--PDSISISCVLKALSGCDDFWLGSLARQV 154
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
F + GF + V + I ++KC+ +E + ++F E D SMIS Y+
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 329 EDALHLFVLTLR-ENIRPTEYMV-----SCLLSSFSIFLPVEVGIQIHALVPKLGFESDA 382
ED ++ L + +P V +C SS IF G+++H + + + D
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF-----GLEVHKKMIENHIQMDL 269
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKIKD------------------------------ 412
L + ++ YAK G +D A +F+E KD
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 413 -LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
L +WN ++ GL N ++ F+E+IR G P+ +TL+++L + Y S + G +I
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 472 FSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCV 527
F ++ G ++ YV ++ +K G L A + + +L W I++
Sbjct: 390 -----AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYA 443
Query: 528 IHGD 531
+HGD
Sbjct: 444 VHGD 447
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 236/474 (49%), Gaps = 20/474 (4%)
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL-VDYSFSVILTMKKIDI--------ISWN 215
Q+HG +++SG+ L +V N+LI Y K L D + + +K + N
Sbjct: 36 QLHGYVVKSGLSLIPLV-ANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQN 94
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
L W ++L KM L PD + C+ L D G+ V K
Sbjct: 95 ELPW---------MSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKT 145
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
G+ + V S+ +D+++KC + + ++F E + + + M+ YA E+AL LF
Sbjct: 146 GYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF 205
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKF 395
L EN+ +Y S ++S + +E+G QIH L K F+S + + S+LV +Y+K
Sbjct: 206 KEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKC 265
Query: 396 GIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
G+ + A +FNE +K+L WN ++ A + ++LFK + GM P+ IT VL
Sbjct: 266 GVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVL 325
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTIT 515
AC++ VDEG + +F E ++P ++HY +V+ML +AG L+EA++++ MP T
Sbjct: 326 NACSHAGLVDEG-RYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPT 384
Query: 516 LDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKD 575
+W +L+ C +H + ++ A ++ E P + ++ L+ AY GR+E + RK
Sbjct: 385 ESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKL 444
Query: 576 MEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
+ + K+ G SW +N V+TF + + +H K+ EME GY+
Sbjct: 445 LRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYI 498
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 4/289 (1%)
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
C L+S + R KG Q+ + K G +V++ I+ +SK DS R F +
Sbjct: 19 CDLLLS-SARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ 368
+ + +S+IS +A ++L +L + N+RP ++++ S +I ++G
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
+H L K G+++D + S+LV MYAK G I A +F+E +++V+W+ +M G A G+
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYT 488
L LFKE + E +A + + ++V+ C + ++ G +I + + +
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI-HGLSIKSSFDSSSFVGS 256
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQ-VIE 536
+V + SK G+ + A + +P L +W +L H Q VIE
Sbjct: 257 SLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIE 304
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 179/407 (43%), Gaps = 37/407 (9%)
Query: 18 CSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
C LL ++ ++ +++ H + +K GL+ + N ++ YS D+ + F+D
Sbjct: 19 CDLLLSSARTRSTIKGLQL-HGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFED-- 75
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
P + +W+S+IS +A N +LE +
Sbjct: 76 -----------------------------SPQKSSTTWSSIISCFAQNELPWMSLEFLKK 106
Query: 138 MQGAGMRPSSFTFSILTS--LVSSPCH-AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
M +RP T + S C + VH +++G D ++V +G+SL+ MY K G
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYD-ADVFVGSSLVDMYAKCG 165
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
+ Y+ + M + ++++W+ +M+ + G +E AL F + L + ++ S+++S
Sbjct: 166 EIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVIS 225
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
VC+N L+ G+Q+ K F +S V S+ + L+SKC E + ++F E + +
Sbjct: 226 VCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGI 285
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
+M+ +YA H + + LF ++P +L++ S V+ G +
Sbjct: 286 WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK 345
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIM 420
+ E ++LV M + G + +AL + I S W ++
Sbjct: 346 ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 144/317 (45%), Gaps = 50/317 (15%)
Query: 7 QTQGPYTSLSYCSTLL-------DHCLSQKS--------VNFVKIVHAHFLKLGLNTYTY 51
Q + P+ SL + ++ DH L + + + VH +K G + +
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 52 LGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRD 111
+G+ +D+Y+ G I A K+FD+ MP R+
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDE-------------------------------MPQRN 181
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHG 168
VV+W+ M+ GYA G + +AL LF E + + ++FS + S+ ++ +Q+HG
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG 241
Query: 169 RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHE 228
+ S+ +G+SL+++Y K G+ + ++ V + ++ WN+++ A + H +
Sbjct: 242 -LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQ 300
Query: 229 LALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAI 288
+ F +M+ + + P+ T +++ CS+ +D+G+ F + ++ +
Sbjct: 301 KVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLV 360
Query: 289 DLFSKCNRLEDSVRLFT 305
D+ + RL++++ + T
Sbjct: 361 DMLGRAGRLQEALEVIT 377
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/625 (24%), Positives = 292/625 (46%), Gaps = 77/625 (12%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C + V K++H+ +KLG+++ + N L +Y+ G ++ A K F + ++
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMP-------------------------------- 108
+WN L ++G+ A +L M
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 109 -------VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC 161
DV +W +MISG NG AL++F +M AG+ P++ T I++++ + C
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT--IMSAVSACSC 364
Query: 162 -----HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNS 216
+VH ++ G + +V++GNSL+ MY K G ++ + V ++K D+ +WNS
Sbjct: 365 LKVINQGSEVHSIAVKMGF-IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNS 423
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
++ +AG+ A F +M+DA L P+ T +T++S +++ D+G+
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS--GYIKNGDEGE---------- 471
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFV 336
A+DLF R+E ++ W+ +I+ Y + ++AL LF
Sbjct: 472 ----------AMDLFQ---RMEKDGKVQRNTATWNL-----IIAGYIQNGKKDEALELFR 513
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFG 396
P + LL + + L ++ +IH V + ++ + + L YAK G
Sbjct: 514 KMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSG 573
Query: 397 IIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLL 456
I+ + IF + KD+++WN+++ G +G L LF ++ +G+ P+R TL++++L
Sbjct: 574 DIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIIL 633
Query: 457 ACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITL 516
A VDEG K+F+S+ ++ + P EH + +V + +A L+EA+ ++ M
Sbjct: 634 AHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSET 693
Query: 517 DMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDM 576
+W L+ C IHGD+ + A+ + EP+ +++Q Y + + + K
Sbjct: 694 PIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPR 753
Query: 577 EQKCTKEFIGCSWFGMKNHVYTFQS 601
K+ +G SW ++N ++TF +
Sbjct: 754 RDNLLKKPLGQSWIEVRNLIHTFTT 778
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 219/511 (42%), Gaps = 73/511 (14%)
Query: 9 QGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTY--TYLGNRCLDLYSDLGHI 66
QG S LL+ C+ S++ +I+HA F GL T ++ + L +Y+ G I
Sbjct: 75 QGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETKLLSMYAKCGCI 131
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
DA KVF D M R++ +W++MI Y+
Sbjct: 132 ADARKVF-------------------------------DSMRERNLFTWSAMIGAYSREN 160
Query: 127 FSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC----HAKQVHGRIIRSGMDLSNVVL 182
+ +LF M G+ P F F + ++ C K +H +I+ GM S + +
Sbjct: 161 RWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN-CGDVEAGKVIHSVVIKLGMS-SCLRV 218
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
NS++A+Y K G +D++ M++ D+I+WNS++ A + G HE A+ +M +
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
P T + L+ + L D AA+DL K +
Sbjct: 279 SPGLVTWNILIGGYNQLGKCD----------------------AAMDLMQKMETFGITAD 316
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
+FT W T+MIS + + AL +F + P + +S+ S
Sbjct: 317 VFT----W-----TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMG 422
+ G ++H++ K+GF D ++ ++LV MY+K G ++DA +F+ K KD+ +WN+++ G
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 427
Query: 423 LAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKP 482
G +LF + + P+ IT ++ E + +F ME + V+
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Query: 483 GEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
+ ++ + G EA+++ M ++
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
E D + + L+ MYAK G I DA +F+ + ++L +W+ ++ + + LF+
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 439 LIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG 498
++++G+ PD +L C V+ G K+ S+ + G+ ++ + +K G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 499 MLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP--FPYLVL 556
L A M + ++L+ C + +E V + ME+E +P + +L
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKE--MEKEGISPGLVTWNIL 288
Query: 557 AQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQS 601
Y +G+ ++ + + + ME FG+ V+T+ +
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMET-----------FGITADVFTWTA 322
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 157/619 (25%), Positives = 285/619 (46%), Gaps = 79/619 (12%)
Query: 15 LSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFD 74
L ++LL C+ ++ VHAH + G+ ++ L + + YS N+A + +
Sbjct: 43 LHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE 102
Query: 75 --DISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL 132
DI H + WN +I+ YA N + +
Sbjct: 103 NSDILHP---------------------------------LPWNVLIASYAKNELFEEVI 129
Query: 133 ELFVEMQGAGMRPSSFTF-SILTSLVSS--PCHAKQVHGRIIRSGMDLSNVVLGNSLIAM 189
+ M G+RP +FT+ S+L + + + VHG I S S++ + N+LI+M
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYK-SSLYVCNALISM 188
Query: 190 YGKVGLVDYSFSVILTMKKIDIISWNSL--------MWA--------------------- 220
Y + + + + M + D +SWN++ MW+
Sbjct: 189 YKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITW 248
Query: 221 ------CHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
C + G++ AL +MR+ D + CS + + GK++
Sbjct: 249 NIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIH 308
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT--SMISSYATHDLGEDAL 332
+ V + I ++SKC L ++ +F + + + +LCT S+IS YA + E+A
Sbjct: 309 SSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE--ENSLCTWNSIISGYAQLNKSEEAS 366
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA-LVPKLGFESDAVLASTLVHM 391
HL L +P ++ +L + ++ G + H ++ + F+ +L ++LV +
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
YAK G I A + + +D V++ +++ G G+ V L LFKE+ R G+ PD +T+
Sbjct: 427 YAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
AVL AC++ V EG ++F M+ E+G++P +H++ +V++ +AG L +A DI+ MP
Sbjct: 487 VAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVR 571
Y + W +L+ C IHG+ Q+ + A++++E +P+ P Y+++A Y G W L
Sbjct: 547 YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAE 606
Query: 572 VRKDMEQKCTKEFIGCSWF 590
VR M K+ GC+W
Sbjct: 607 VRTIMRDLGVKKDPGCAWI 625
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 239/471 (50%), Gaps = 7/471 (1%)
Query: 131 ALELFVEMQGAGMRPSSFTFS--ILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIA 188
A++ +Q G+ S T+S I + + H + R + + L N LI
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 189 MYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
MY K L++ + + M + ++ISW +++ A + H+ AL M + P+ +T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
S+++ C+ + D+ + + K G + V SA ID+F+K ED++ +F E
Sbjct: 165 YSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ 368
D + S+I +A + + AL LF R + ++ +L + + +E+G+Q
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
H + K ++ D +L + LV MY K G ++DAL +FN+ K +D+++W+T++ GLA NG
Sbjct: 282 AHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYT 488
L LF+ + G P+ IT+ VL AC++ +++G F SM+ +G+ P EHY
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQ 548
++++L KAG L +A+ ++ M WR +L C + ++ + E AK+++ +P+
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPE 459
Query: 549 APFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
Y +L+ Y +W+S+ +R M + K+ GCSW + ++ F
Sbjct: 460 DAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 198/416 (47%), Gaps = 36/416 (8%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
Q+ G + + S L+ C+S ++V+ ++ H G +L N +++Y +
Sbjct: 53 QSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLL 112
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
NDA QLFD MP R+V+SW +MIS Y+
Sbjct: 113 NDAH-------------------------------QLFDQMPQRNVISWTTMISAYSKCK 141
Query: 127 FSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSL 186
ALEL V M +RP+ +T+S + + + +H II+ G++ S+V + ++L
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-SDVFVRSAL 200
Query: 187 IAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQ 246
I ++ K+G + + SV M D I WNS++ + ++AL F +M+ A + +Q
Sbjct: 201 IDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 247 FTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
T ++++ C+ L L+ G Q A V + + I+++A +D++ KC LED++R+F +
Sbjct: 261 ATLTSVLRACTGLALLELGMQ--AHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 307 QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG 366
D ++MIS A + ++AL LF +P + +L + S +E G
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 367 IQIHALVPKL-GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
+ KL G + ++ + K G +DDA+ + NE + + D V+W T++
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/547 (25%), Positives = 253/547 (46%), Gaps = 36/547 (6%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
G + A +LF +P DVV WN+MI G++ + + L++ M G+ P S TF L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 155 SLVSSPCHA----KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
+ + A K++H +++ G+ SN+ + N+L+ MY GL+D + V K D
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
+ SWN ++ +R +E ++ +M + P T ++S CS ++D D K+V
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTS------------- 317
+ + + + +A ++ ++ C ++ +VR+F D TS
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 318 ------------------MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSI 359
MI Y ++L +F + P E+ + +L++ +
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 360 FLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTI 419
+E+G I + K ++D V+ + L+ MY K G + A +F++ +D +W +
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 420 MMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFG 479
++GLA NG+ + +F ++ + PD IT VL ACN+ VD+ K F M ++
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 480 VKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVA 539
++P HY +V+ML +AG++KEA +I+ MP +W +L +H D + E A
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 540 KEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
K+I+E EP Y +L Y RW+ L VR+ + K+ G S + + F
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 600 QSNQLQH 606
+ H
Sbjct: 621 VAGDKSH 627
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 134/255 (52%), Gaps = 8/255 (3%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C K + K VH + + L N ++ Y+ G ++ A+++F + ++
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
SW +KG ++ G L A FD MPVRD +SW MI GY G +++LE+F EMQ
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 141 AGMRPSSFTFSILTSLVSSPCHAKQVH-GRIIRSGMD----LSNVVLGNSLIAMYGKVGL 195
AGM P FT + S++++ H + G I++ +D ++VV+GN+LI MY K G
Sbjct: 362 AGMIPDEFT---MVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
+ + V M + D +W +++ G + A+ F++M+D + PD T ++S
Sbjct: 419 SEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Query: 256 CSNLRDLDKGKQVFA 270
C++ +D+ ++ FA
Sbjct: 479 CNHSGMVDQARKFFA 493
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 186/427 (43%), Gaps = 78/427 (18%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +H H +K GL + Y+ N + +YS G ++ A VFD
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD-------------------- 194
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
C+ DV SWN MISGY +++EL VEM+ + P+S T ++
Sbjct: 195 ----RRCK-------EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 155 SLVSSPCHA---KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
S S K+VH + + S + L N+L+ Y G +D + + +MK D+
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDV 302
Query: 212 ISWNSLM--------------------------WACH-----RAGHHELALAHFYKMRDA 240
ISW S++ W RAG +L F +M+ A
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
++PD+FT ++++ C++L L+ G+ + + K + +V +A ID++ KC E +
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKA 422
Query: 301 VRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIF 360
++F + D+ D T+M+ A + G++A+ +F +I+P + +LS+ +
Sbjct: 423 QKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS 482
Query: 361 LPVEVGIQIHALVPKLGFESDAVLASTLVH------MYAKFGIIDDALHIFNETKIK-DL 413
V+ Q K+ SD + +LVH M + G++ +A I + + +
Sbjct: 483 GMVD---QARKFFAKM--RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNS 537
Query: 414 VSWNTIM 420
+ W ++
Sbjct: 538 IVWGALL 544
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/575 (25%), Positives = 269/575 (46%), Gaps = 79/575 (13%)
Query: 107 MPV-----RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS--- 158
MP+ R + S +S +A+ S A+ + G+R F +L SL+
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIR---LPFDLLASLLQQCG 57
Query: 159 ---SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL-VD-------------YSFS 201
S K +H + +G N +L N LI MY K G +D YS++
Sbjct: 58 DTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWN 117
Query: 202 -----------------VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP 244
V +M + D++SWN+++ + G+ AL + + R + +
Sbjct: 118 NMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF 177
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
++F+ + L++ C R L +Q GF+ N ++S + ID ++KC ++E + R F
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCF 237
Query: 305 TEQDRWDTALCTSMISSYAT-------------------------------HDLGEDALH 333
E D + T++IS YA G AL
Sbjct: 238 DEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALD 297
Query: 334 LFVLTLRENIRPTEYMVS-CLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
LF + ++P ++ S CL +S SI + G +IH + + +A++ S+L+ MY
Sbjct: 298 LFRKMIALGVKPEQFTFSSCLCASASI-ASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 393 AKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
+K G ++ + +F K D V WNT++ LA +G L + ++I+ + P+R TL
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
+L AC++ V+EG++ F SM + G+ P +EHY ++++L +AG KE + +E MP
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVR 571
+ +W IL VC IHG+ ++ + A E+++ +P++ PY++L+ Y G+WE + +
Sbjct: 477 FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 572 VRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+R M+++ + SW ++ V F + H
Sbjct: 537 LRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 224/479 (46%), Gaps = 42/479 (8%)
Query: 9 QGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLN-TYTYLGNRCLDLYSDLGHIN 67
QG ++LL C KS+ K +H H G T L N + +Y G
Sbjct: 40 QGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPI 99
Query: 68 DALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGF 127
DA KVFD + +N SWN + G +KSG L A +FD MP RDVVSWN+M+ GYA +G
Sbjct: 100 DACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGN 159
Query: 128 SSDALELFVEMQGAGMRPSSFTFS-ILTSLVSSPCHA--KQVHGRIIRSGMDLSNVVLGN 184
+AL + E + +G++ + F+F+ +LT+ V S +Q HG+++ +G LSNVVL
Sbjct: 160 LHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGF-LSNVVLSC 218
Query: 185 SLIAMYGKVGLVDYSFSVI--LTMKKIDI-----------------------------IS 213
S+I Y K G ++ + +T+K I I +S
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
W +L+ R G AL F KM + P+QFT S+ + +++ L GK++ +
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTALCTSMISSYATHDLGEDAL 332
+ N+IV S+ ID++SK LE S R+F D+ D +MIS+ A H LG AL
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLGFESDAVLASTLVHM 391
+ ++ ++P + +L++ S VE G++ ++ + G D + L+ +
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 392 YAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIR---EGMAP 446
+ G + + E + D WN I+ +G + ELI+ E AP
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP 517
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 248/491 (50%), Gaps = 9/491 (1%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
KSG A F + D+ SW S+I+ A +G ++ ++F EMQ GM P S
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 153 LTSLVSS----PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM-K 207
L + + P K HG +IR L + V NSL++MY K L+ + + + +
Sbjct: 337 LINELGKMMLVP-QGKAFHGFVIRHCFSLDSTVC-NSLLSMYCKFELLSVAEKLFCRISE 394
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ + +WN+++ + H + F K+++ + D + ++++S CS++ + GK
Sbjct: 395 EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS 454
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ + K V ++ IDL+ K L + R+F E D + +MI+SY +
Sbjct: 455 LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQ 513
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
E A+ LF + EN +P+ + LL + +E G IH + + E + L++
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA 573
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
L+ MYAK G ++ + +F+ KD V WN ++ G +G V + LF ++ + P
Sbjct: 574 LIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPT 633
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
T A+L AC + V++G K+F M ++ VKP +HY+ +V++LS++G L+EA V
Sbjct: 634 GPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTV 692
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
+MP++ +W +LS C+ HG+ ++ +A+ + +PQ Y++LA Y G+WE
Sbjct: 693 MSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWE 752
Query: 568 SLVRVRKDMEQ 578
R R+ M +
Sbjct: 753 EAERAREMMRE 763
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 170/373 (45%), Gaps = 7/373 (1%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
G+ + ++F + RD+ WNS+I + SNG + +L F M +G P FT ++
Sbjct: 73 GKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVV 132
Query: 155 SLVSSPC--HAKQ-VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
S + H VHG +++ G N +G S + Y K G + + V M D+
Sbjct: 133 SACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDV 192
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL---MSVCSNLRDLDKGKQV 268
++W +++ + G E L + KM A D+ TL CSNL L +G+ +
Sbjct: 193 VAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
F K G + V S+ +SK ++ F E D TS+I+S A
Sbjct: 253 HGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDM 312
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
E++ +F + + P ++SCL++ + V G H V + F D+ + ++L
Sbjct: 313 EESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSL 372
Query: 389 VHMYAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
+ MY KF ++ A +F ++ + +WNT++ G ++LF+++ G+ D
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 448 RITLAAVLLACNY 460
+ +V+ +C++
Sbjct: 433 SASATSVISSCSH 445
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
TLL C++ S+ +++H + + L +D+Y+ GH+ + ++FD + K
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDV----VSWNSMISGYASNGFSSDALELF 135
++ WN+ + G G + +A LFD M DV ++ +++S G +LF
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF 657
Query: 136 VEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSL 186
++M ++P+ +S L L+S + ++ ++ V+ G L
Sbjct: 658 LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLL 708
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 279/577 (48%), Gaps = 47/577 (8%)
Query: 30 SVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLK 89
++N VK +HA ++ L+ ++ + + S N A++VF+ + N ++C
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV---HLC-- 85
Query: 90 GLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT 149
NS+I +A N A +F EMQ G+ +FT
Sbjct: 86 --------------------------NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFT 119
Query: 150 FSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL--VDYSFSVIL 204
+ L S K +H I + G+ S++ + N+LI Y + G V + +
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLS-SDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
M + D +SWNS++ +AG A F +M +L+ + +T++ + R++ K
Sbjct: 179 KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI----SWNTMLDGYARCREMSK 234
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD--RWDTALCTSMISSY 322
++F + N++ S + +SK +E + +F + + T +I+ Y
Sbjct: 235 AFELFEKMPE----RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGY 290
Query: 323 ATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDA 382
A L ++A L + ++ V +L++ + + +G++IH+++ + S+A
Sbjct: 291 AEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNA 350
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
+ + L+ MYAK G + A +FN+ KDLVSWNT++ GL +G ++LF + RE
Sbjct: 351 YVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 443 GMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKE 502
G+ PD++T AVL +CN+ +DEGI F+SME + + P EHY +V++L + G LKE
Sbjct: 411 GIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKE 470
Query: 503 AIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQM 562
AI +V+TMP + +W +L C +H ++ + + V +++ +P P Y +L+ Y
Sbjct: 471 AIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAA 530
Query: 563 MGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
WE + +R M+ ++ G S +++ ++ F
Sbjct: 531 AEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEF 567
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 206/441 (46%), Gaps = 71/441 (16%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGH--INDALKVFDDISH 78
LL C Q + VK++H H KLGL++ Y+ N +D YS G + DA+K+F+ +S
Sbjct: 123 LLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE 182
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
+++ SWN L GL+K+G+L +A +LFD MP RD++SWN+M+ GYA S A ELF +M
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
P T S S +V+G Y K G D
Sbjct: 243 ------PERNTVS-------------------------WSTMVMG------YSKAG--DM 263
Query: 199 SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCS-------- 250
+ ++ K+ + + N + W AG+ E L +++A+ L DQ S
Sbjct: 264 EMARVM-FDKMPLPAKNVVTWTIIIAGYAEKGL-----LKEADRLVDQMVASGLKFDAAA 317
Query: 251 --TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
++++ C+ L G ++ + + N+ V +A +D+++KC L+ + +F +
Sbjct: 318 VISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI- 367
+ D +M+ H G++A+ LF RE IRP + +L S + ++ GI
Sbjct: 378 KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID 437
Query: 368 ------QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
+++ LVP++ LV + + G + +A+ + ++ ++V W ++
Sbjct: 438 YFYSMEKVYDLVPQVEH------YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 491
Query: 421 MGLAYNGKVSVTLDLFKELIR 441
+ +V + ++ L++
Sbjct: 492 GACRMHNEVDIAKEVLDNLVK 512
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 55/226 (24%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
++L C ++ +H+ + L + Y+ N LD+Y+ G++ A VF+DI K
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+ SWN +M+ G +G +A+ELF M+
Sbjct: 380 DLVSWN-------------------------------TMLHGLGVHGHGKEAIELFSRMR 408
Query: 140 GAGMRPSSFTF-SILTSLVSSPCHAKQVHGRIIRSGMD-----------LSNVVLGNSLI 187
G+RP TF ++L S C+ H +I G+D + V L+
Sbjct: 409 REGIRPDKVTFIAVLCS-----CN----HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLV 459
Query: 188 AMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALA 232
+ G+VG + + V+ TM + +++ W +L+ AC H+E+ +A
Sbjct: 460 DLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM--HNEVDIA 503
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 15/272 (5%)
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C+NL + KQ+ A + + ++ I S C + +VR+F + + LC
Sbjct: 29 CANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
S+I ++A + A +F R + + LL + S + V +H + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 376 LGFESDAVLASTLVHMYAKFG--IIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
LG SD + + L+ Y++ G + DA+ +F + +D VSWN+++ GL G++
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
LF E+ + D I+ +L + + ++F M V ++ +V
Sbjct: 206 RLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WSTMVMG 256
Query: 494 LSKAGMLKEAIDIVETMPYTI-TLDMWRLILS 524
SKAG ++ A + + MP + W +I++
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIA 288
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 245/529 (46%), Gaps = 36/529 (6%)
Query: 136 VEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
V++ G +P + T+ L + S K+VH I SG + +V+ N L+ MY K
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF-VPGIVIWNRLLRMYAK 132
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM--------------- 237
G + + V M D+ SWN ++ G E A F +M
Sbjct: 133 CGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGY 192
Query: 238 -----------------RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYN 280
R P+ FT S ++ + ++ + +GK++ + G +
Sbjct: 193 VKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSD 252
Query: 281 SIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLR 340
++ S+ +D++ KC ++++ +F + D TSMI Y + LF +
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
RP EY + +L++ + E+G Q+H + ++GF+ + +S+LV MY K G I+
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 401 ALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY 460
A H+ + DLVSW +++ G A NG+ L F L++ G PD +T VL AC +
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 461 GSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWR 520
V++G++ F+S+ + + +HYT +V++L+++G ++ ++ MP + +W
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 521 LILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKC 580
+L C +G++ + E A+E+ + EP+ P Y+ +A Y G+WE ++RK M++
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 581 TKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
+ G SW +K + F + H +M+ EGYV
Sbjct: 553 VTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYV 601
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 252/492 (51%), Gaps = 21/492 (4%)
Query: 4 FLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDL 63
L + + P S +YC+ L+ C +++ K VH H G + NR L +Y+
Sbjct: 76 LLGRAKKPPAS-TYCN-LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
G + DA KVFD++ +++ SWN+ + G + G L A +LFD M +D SW +M++GY
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 124 SNGFSSDALELFVEMQG-AGMRPSSFTFSI-LTSLVSSPC--HAKQVHGRIIRSGMDLSN 179
+AL L+ MQ RP+ FT SI + + + C K++HG I+R+G+D S+
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD-SD 252
Query: 180 VVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRD 239
VL +SL+ MYGK G +D + ++ + + D++SW S++ ++ + F ++
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 299
+ P+++T + +++ C++L + GKQV + +VGF S SS+ +D+++KC +E
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 300 SVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSI 359
+ + + D TS+I A + ++AL F L L+ +P +LS+ +
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 360 FLPVEVGIQ-IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWN 417
VE G++ +++ K + + LV + A+ G + + +E +K W
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDR----ITLAAVLLACNYGSFVDEGIKIFFS 473
+++ G + G + + + +EL + + P+ +T+A + A G + +EG K+
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAA--GKWEEEG-KMRKR 547
Query: 474 METEFGV--KPG 483
M+ E GV +PG
Sbjct: 548 MQ-EIGVTKRPG 558
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 46/360 (12%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
+Y+ +++ ++ S + + K + K +H H ++ GL++ L + +D+Y
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
G I++A +FD I K DVVSW SMI
Sbjct: 264 GKCGCIDEARNIFDKIVEK-------------------------------DVVSWTSMID 292
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFS-ILTSL--VSSPCHAKQVHGRIIRSGMDL 177
Y + + LF E+ G+ RP+ +TF+ +L + +++ KQVHG + R G D
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 178 SNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM 237
+ +SL+ MY K G ++ + V+ K D++SW SL+ C + G + AL +F +
Sbjct: 353 YSFA-SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411
Query: 238 RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF-AFCFKVGFVYNSIVSSAAIDLFSKCNR 296
+ PD T ++S C++ ++KG + F + K + S + +DL ++ R
Sbjct: 412 LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGR 471
Query: 297 LEDSVRLFTEQDR------WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMV 350
E + +E W + L S+Y DL E+A EN P Y+
Sbjct: 472 FEQLKSVISEMPMKPSKFLWASVL--GGCSTYGNIDLAEEAAQELFKIEPEN--PVTYVT 527
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 255/505 (50%), Gaps = 9/505 (1%)
Query: 92 LKSGQLGNACQLFDGMPV--RDVVSWNSMISGYASNGFS--SDALELFVEMQG--AGMRP 145
++S +L A F+ +P R+ SWN+++SGY+ + SD L L+ M+ G+
Sbjct: 50 IQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDS 109
Query: 146 SSFTFSILTSL-VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
+ F+I + + + +HG +++G+D + V SL+ MY ++G ++ + V
Sbjct: 110 FNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYV-APSLVEMYAQLGTMESAQKVFD 168
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
+ + + W LM + F MRD L D T L+ C N+
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV 228
Query: 265 GKQVFAFCFKVGFVYNS-IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
GK V + F+ S + ++ ID++ KC L+++ +LF + + T++IS +A
Sbjct: 229 GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV 383
+ +A LF LRE+I P + ++ +L S S + G +H + + G E DAV
Sbjct: 289 KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV 348
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
++ + MYA+ G I A +F+ ++++SW++++ NG LD F ++ +
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+ P+ +T ++L AC++ V EG K F SM ++GV P EEHY +V++L +AG + EA
Sbjct: 409 VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA 468
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMM 563
++ MP W +LS C IH ++ + +A++++ EP+ Y++L+ Y
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
Query: 564 GRWESLVRVRKDMEQKCTKEFIGCS 588
G WE + VR+ M K ++ +G S
Sbjct: 529 GMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 203/454 (44%), Gaps = 37/454 (8%)
Query: 36 IVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSG 95
++H +K GL+ Y+ +++Y+ LG + A KVFD+I +NS W + +KG LK
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
+ +LF M RD G + DAL L ++ G + F +
Sbjct: 190 KDPEVFRLFCLM--RDT-------------GLALDALTLICLVKACG---NVFAGKV--- 228
Query: 156 LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN 215
K VHG IR + L S+I MY K L+D + + T +++ W
Sbjct: 229 -------GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
+L+ + A F +M +LP+Q T + ++ CS+L L GK V + +
Sbjct: 282 TLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN 341
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
G +++ ++ ID++++C ++ + +F + +SMI+++ + L E+AL F
Sbjct: 342 GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCF 401
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVG-IQIHALVPKLGFESDAVLASTLVHMYAK 394
+N+ P LLS+ S V+ G Q ++ G + + +V + +
Sbjct: 402 HKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGR 461
Query: 395 FGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
G I +A + +K + S W ++ + +V + ++ ++L+ M P++ ++
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL--SMEPEKSSVYV 519
Query: 454 VLLACNYGSFVDEGI-KIFFSMETEFGVKPGEEH 486
+L + D G+ ++ + + G+K +H
Sbjct: 520 LL----SNIYADAGMWEMVNCVRRKMGIKGYRKH 549
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 266/577 (46%), Gaps = 79/577 (13%)
Query: 31 VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
V+ + +H + K G + T L N + Y + DA KVFD+
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDE--------------- 115
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
MP DV+SWNS++SGY +G + + LF+E+ + + P+ F+F
Sbjct: 116 ----------------MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 151 SILTSLVS----SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
+ + + SP A +H ++++ G++ NVV+GN LI MYGK G +D + V M
Sbjct: 160 TAALAACARLHLSPLGA-CIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGK 266
++ D +SWN+++ +C R G EL L F++M + PD T
Sbjct: 219 EEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT------------------ 256
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
YN + ID F K ++ ++ ++ +++ ++++ Y +
Sbjct: 257 ------------YNEL-----IDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSE 299
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
+A F +R EY +S +L++ + V G IHA KLG +S V+AS
Sbjct: 300 KSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVAS 359
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG-MA 445
L+ MY+K G++ A +F K+L+ WN ++ G A NG + LF +L +E +
Sbjct: 360 ALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLK 419
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSME-TEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
PDR T +L C++ E + +F M E+ +KP EH ++ + + G + +A
Sbjct: 420 PDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAK 479
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIME--REPQAPFPYLVLAQAYQM 562
+++ + WR +L C DL+ +TVA +++E + + Y+V++ Y
Sbjct: 480 QVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAY 539
Query: 563 MGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
RW + ++RK M + + +G SW + ++
Sbjct: 540 HERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 6/239 (2%)
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
SW++++ A R G + A + D E PD L+ V N + +Q+ +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEK-PDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
K GFV N+ +S++ + + + LED+ ++F E D S++S Y ++ +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE-SDAVLASTLVHM 391
LF+ R ++ P E+ + L++ + +G IH+ + KLG E + V+ + L+ M
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT 450
Y K G +DDA+ +F + KD VSWN I+ + NGK+ + L F ++ PD +T
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT 256
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 211/486 (43%), Gaps = 62/486 (12%)
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHA---KQVHGRI 170
SW++++ A G S L VE+ G +P + L + + + +Q+HG +
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 171 IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELA 230
+ G +SN L NSL+ Y ++ + V M D+ISWNSL+ ++G +
Sbjct: 82 TKHGF-VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY-NSIVSSAAID 289
+ F ++ +++ P++F+ + ++ C+ L G + + K+G N +V + ID
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 290 LFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYM 349
++ KC ++D+V +F + DT ++++S + +
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNG----------------------- 237
Query: 350 VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
+E+G+ +P D V + L+ + K G ++A + ++
Sbjct: 238 ------------KLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDMP 281
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIK 469
+ SWNTI+ G + K + F ++ G+ D +L+ VL A + V G
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG-S 340
Query: 470 IFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIH 529
+ + + G+ + +++M SK GMLK A + TMP L +W ++S +
Sbjct: 341 LIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK-NLIVWNEMISGYARN 399
Query: 530 GD-LQVIETVAKEIMER--EPQAPFPYLVLAQAYQ--------MMGRWESLV---RVRKD 575
GD ++ I+ + ER +P F +L L M+G +E ++ R++
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDR-FTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPS 458
Query: 576 MEQKCT 581
+E C+
Sbjct: 459 VEHCCS 464
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 247/477 (51%), Gaps = 10/477 (2%)
Query: 161 CHA----KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL---VDYSFSVILTMKKIDIIS 213
CH KQVH R I+ + S+ +S++A G ++Y+ S+ +
Sbjct: 40 CHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFD 99
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
+N+++ E AL + +M PD FT L+ C+ L+ + +GKQ+ F
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
K+G + V ++ I+++ +C +E S +F + + A +SM+S+ A + + L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 334 LFVLTLRE-NIRPTEY-MVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
LF E N++ E MVS LL+ + + +G+ IH + + E + ++ ++LV M
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTG-ALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
Y K G +D ALHIF + + ++ ++++ ++ GLA +G+ L +F ++I+EG+ PD +
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
+VL AC++ V EG ++F M E V+P EHY +V++L +AG+L+EA++ ++++P
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVR 571
+WR LS C + ++++ + A+E+++ P YL+++ Y W+ + R
Sbjct: 399 IEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVAR 458
Query: 572 VRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGY 628
R ++ K K+ G S +K + F S H K+ W+++ EGY
Sbjct: 459 TRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGY 515
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 160/327 (48%), Gaps = 7/327 (2%)
Query: 100 ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSL 156
A +F G+ +N+MI GY + +AL + EM G P +FT+ L +
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 157 VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNS 216
+ S KQ+HG++ + G++ ++V + NSLI MYG+ G ++ S +V ++ SW+S
Sbjct: 145 LKSIREGKQIHGQVFKLGLE-ADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 217 LMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
++ A G L F M + L ++ + + C+N L+ G + F +
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
N IV ++ +D++ KC L+ ++ +F + ++ + ++MIS A H GE AL +F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG-FESDAVLASTLVHMYAK 394
++E + P + +L++ S V+ G ++ A + K G E A LV + +
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 395 FGIIDDALHIFNETKI-KDLVSWNTIM 420
G++++AL I K+ V W T +
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFL 410
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 37/286 (12%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
LL C KS+ K +H KLGL ++ N +++Y G + + VF+ + K
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-- 138
+ SW+SM+S A G S+ L LF M
Sbjct: 198 A-------------------------------ASWSSMVSARAGMGMWSECLLLFRGMCS 226
Query: 139 -QGAGMRPSSFTFSILTSLVSSPCH-AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
S ++L + + +HG ++R+ +L N+++ SL+ MY K G +
Sbjct: 227 ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL-NIIVQTSLVDMYVKCGCL 285
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
D + + M+K + +++++++ G E AL F KM L PD ++++ C
Sbjct: 286 DKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNAC 345
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAA-IDLFSKCNRLEDSV 301
S+ + +G++VFA K G V + +DL + LE+++
Sbjct: 346 SHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEAL 391
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 24/310 (7%)
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKC------NRLEDSVR 302
C L+ C N+ D+ KQV A K+ Y+S S++++ +KC N + +
Sbjct: 33 CLYLLKRCHNI---DEFKQVHARFIKLSLFYSSSFSASSV--LAKCAHSGWENSMNYAAS 87
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
+F D T +MI Y E+AL + ++ P + CLL + +
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMG 422
+ G QIH V KLG E+D + ++L++MY + G ++ + +F + + K SW++++
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 423 LAYNGKVSVTLDLFKELIRE-GMAPDRITLAAVLLACNYGSFVDEGIKI---FFSMETEF 478
A G S L LF+ + E + + + + LLAC ++ G+ I +E
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 479 GVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGD----LQV 534
+ T +V+M K G L +A+ I + M L + ++S +HG+ L++
Sbjct: 268 NIIV----QTSLVDMYVKCGCLDKALHIFQKMEKRNNL-TYSAMISGLALHGEGESALRM 322
Query: 535 IETVAKEIME 544
+ KE +E
Sbjct: 323 FSKMIKEGLE 332
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/519 (30%), Positives = 270/519 (52%), Gaps = 18/519 (3%)
Query: 83 SWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG 142
S N+ L+ + +A LFD +P RD+ S NS +S + +G +D L LF+++ A
Sbjct: 20 STNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS 79
Query: 143 MRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYS 199
SS TF+ + SL+S P +QVH +I+ G + + + +LI MY K G + S
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAE-TGTISKTALIDMYSKYGHLVDS 138
Query: 200 FSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
V ++++ D++SWN+L+ R G + AL F M + +FT S+++ C++L
Sbjct: 139 VRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASL 198
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSM 318
+ L +GKQV A G ++ +A I +S + ++++++ + D + S+
Sbjct: 199 KILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSL 257
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF 378
IS + ++A F+L R+ RP ++S L+ S + +G QIH + + GF
Sbjct: 258 ISGCIRNRNYKEA---FLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF 312
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
SD+ L + L+ MY K G I A IF K +VSW +++ A NG L++F+E
Sbjct: 313 VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFRE 372
Query: 439 LIRE--GMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
+ E G+ P+ +T V+ AC + V EG + F M+ ++ + PG EHY +++LSK
Sbjct: 373 MCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSK 432
Query: 497 AGMLKEAIDIVETM----PYTITLDMWRLILSVCVIHGDLQVIETVAKEIMERE-PQAPF 551
AG +E +VE M +I +W +LS C ++ DL E VA+ +ME P+
Sbjct: 433 AGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENAS 492
Query: 552 PYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWF 590
Y++++ Y MG+W+ + +R ++ K + G S F
Sbjct: 493 IYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSLF 531
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 42/303 (13%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
VHA +K G T T +D+YS GH+ D+++VF+ + K+ SWN L G L+
Sbjct: 106 VHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR--- 162
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
NG +AL +F M + S FT S +
Sbjct: 163 ----------------------------NGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 157 VSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK-KIDII 212
+S KQVH ++ +G DL VVLG ++I+ Y VGL++ + V ++ D +
Sbjct: 195 CASLKILQQGKQVHAMVVVTGRDL--VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEV 252
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
NSL+ C R +++ A + R P+ S+ ++ CS+ DL GKQ+
Sbjct: 253 MLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVA 307
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
+ GFV +S + + +D++ KC ++ + +F TSMI +YA + G AL
Sbjct: 308 LRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKAL 367
Query: 333 HLF 335
+F
Sbjct: 368 EIF 370
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
Query: 272 CFKVG-FVYNSIVSSAAIDLFSKC----NRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
C ++G F+ V+ + +L +C N + LF E + D + S +SS+
Sbjct: 4 CLRIGRFIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSG 63
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
D L LF+ R + + + + +L + S+ E G Q+HAL+ K G E+ + +
Sbjct: 64 NPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKT 123
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
L+ MY+K+G + D++ +F + KDLVSWN ++ G NGK L +F + RE +
Sbjct: 124 ALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 447 DRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHY---TYVVEMLSKAGMLKEA 503
TL++V+ C + +G ++ + V G + T ++ S G++ EA
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMV-----VVTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 504 IDIVETMPYTITLDMWRLILSVCV 527
+ + ++ M ++S C+
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCI 262
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 245/498 (49%), Gaps = 14/498 (2%)
Query: 113 VSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT---SLVSSPCHAKQVHGR 169
+S N +I G A+ + + PS T+ +L SS A +VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 170 IIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHEL 229
I+ +G D + L LI MY +G VDY+ V +K I WN+L A AGH E
Sbjct: 103 ILDNGSD-QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVC----SNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
L ++KM + D+FT + ++ C + L KGK++ A + G+ + + +
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE--NI 343
+D++++ ++ + +F + ++MI+ YA + +AL F +RE +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
P + +L + + +E G IH + + G +S + S LV MY + G ++
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
+F+ +D+VSWN+++ +G + +F+E++ G +P +T +VL AC++
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
V+EG ++F +M + G+KP EHY +V++L +A L EA +V+ M +W +L
Sbjct: 402 VEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Query: 524 SVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKE 583
C IHG++++ E ++ + EP+ Y++LA Y W+ + RV+K +E + ++
Sbjct: 462 GSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Query: 584 FIGCSWFGMKNHVYTFQS 601
G W ++ +Y+F S
Sbjct: 522 LPGRCWMEVRRKMYSFVS 539
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 180/425 (42%), Gaps = 55/425 (12%)
Query: 25 CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW 84
C + S++ VH H L G + +L + + +YSDLG ++ A KVFD
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK------ 140
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
R + WN++ G + L L+ +M G+
Sbjct: 141 -------------------------RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 145 PSSFTFS-ILTSLVSSPC------HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
FT++ +L + V+S C K++H + R G S+V + +L+ MY + G VD
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS-SHVYIMTTLVDMYARFGCVD 234
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM--RDAELLPDQFTCSTLMSV 255
Y+ V M +++SW++++ + G AL F +M + P+ T +++
Sbjct: 235 YASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C++L L++GK + + + G V SA + ++ +C +LE R+F D
Sbjct: 295 CASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSW 354
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI------ 369
S+ISSY H G+ A+ +F L PT +L + S VE G ++
Sbjct: 355 NSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR 414
Query: 370 -HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNG 427
H + P++ + +V + + +D+A + + + + W +++ +G
Sbjct: 415 DHGIKPQIEH------YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Query: 428 KVSVT 432
V +
Sbjct: 469 NVELA 473
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 231/431 (53%), Gaps = 13/431 (3%)
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAEL 242
N L+ Y K+ ++ + + M + +++SW S++ + G + AL+ F KM D +
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
P+++T +++ CS L + GK + A G N +VSS+ +D++ KCN +E + R
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 303 LFTEQDRWDTALC--TSMISSYATHDLGEDALHLF-----VLTLRENIRPTEYMVSCLLS 355
+F + + TSMI++YA + G +A+ LF LT + R ++M++ ++S
Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT---SDRANQFMLASVIS 244
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
+ S ++ G H LV + G+ES+ V+A++L+ MYAK G + A IF + ++S
Sbjct: 245 ACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVIS 304
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
+ +++M A +G + LF E++ + P+ +TL VL AC++ V+EG++ M
Sbjct: 305 YTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMA 364
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLD--MWRLILSVCVIHGDLQ 533
++GV P HYT VV+ML + G + EA ++ +T+ +W +LS +HG ++
Sbjct: 365 EKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
Query: 534 VIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMK 593
++ +K +++ Q Y+ L+ AY + G WE +R +M++ + CSW K
Sbjct: 425 IVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENK 484
Query: 594 NHVYTFQSNQL 604
+ VY F + L
Sbjct: 485 DSVYVFHAGDL 495
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 213/470 (45%), Gaps = 47/470 (10%)
Query: 4 FLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDL 63
F+ Q + + L + L+ + F ++H LKLG + T+ N + Y L
Sbjct: 18 FVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKL 77
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
IN A K+FD++ N SW S+ISGY
Sbjct: 78 KEINTARKLFDEMCEPNVVSW-------------------------------TSVISGYN 106
Query: 124 SNGFSSDALELFVEM-QGAGMRPSSFTFSILTSLVSSPCHA---KQVHGRIIRSGMDLSN 179
G +AL +F +M + + P+ +TF+ + S+ + K +H R+ SG+ N
Sbjct: 107 DMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR-RN 165
Query: 180 VVLGNSLIAMYGKVGLVDYSFSVILTMKKI--DIISWNSLM--WACHRAGHHELALAHFY 235
+V+ +SL+ MYGK V+ + V +M +++SW S++ +A + GH + L +
Sbjct: 166 IVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF 225
Query: 236 KMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
+QF ++++S CS+L L GK + G+ N++V+++ +D+++KC
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
L + ++F TSMI + A H LGE A+ LF + I P + +L
Sbjct: 286 SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Query: 356 SFSIFLPVEVGIQIHALVP-KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI---K 411
+ S V G++ +L+ K G D+ + +V M +FG +D+A + ++ +
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
+ W ++ +G+V + + K LI+ + ++T A + L+ Y
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQ---SNQQVTSAYIALSNAYA 452
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 250/494 (50%), Gaps = 18/494 (3%)
Query: 103 LFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGM-RPSSFTFSILTSLVSSPC 161
+F+ +P WN +I GY++ + + + + M G+ RP +TF ++ + S+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 162 HAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
+ VHG ++R G D +VV+G S + YGK + + V M + + +SW +L+
Sbjct: 125 QVRVGSSVHGLVLRIGFD-KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCS--TLMSVCSNLRDLDKGKQVFAFCFKVG 276
A ++G E A + F +L+P++ S L+ DL K++F K
Sbjct: 184 VAYVKSGELEEAKSMF------DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK-- 235
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFV 336
+ I ++ ID ++K + + LF E D +++I YA + +A +F
Sbjct: 236 --RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA-LVPKLGFESDAVLASTLVHMYAKF 395
+N++P E+++ L+S+ S E+ ++ + L ++ S + L+ M AK
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKC 353
Query: 396 GIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
G +D A +F E +DLVS+ ++M G+A +G S + LF++++ EG+ PD + +L
Sbjct: 354 GHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTIT 515
C V+EG++ F M ++ + +HY+ +V +LS+ G LKEA +++++MP+
Sbjct: 414 KVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAH 473
Query: 516 LDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKD 575
W +L C +HG+ ++ E VA+ + E EPQ+ Y++L+ Y + RW + +R
Sbjct: 474 ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDK 533
Query: 576 MEQKCTKEFIGCSW 589
M + + G SW
Sbjct: 534 MNENGITKICGRSW 547
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 179/415 (43%), Gaps = 48/415 (11%)
Query: 25 CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW 84
C + V VH L++G + +G +D Y + A KVF ++ +N+ SW
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
+ +KSG+L A +FD MP R++ SWN+++ G +G +A +LF EM
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK---- 235
Query: 145 PSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
+++ S+I Y K G + + +
Sbjct: 236 ---------------------------------RDIISYTSMIDGYAKGGDMVSARDLFE 262
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
+ +D+ +W++L+ + G A F +M + PD+F LMS CS + +
Sbjct: 263 EARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFEL 322
Query: 265 GKQVFAFCFKVGFVYNS-IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
++V ++ + ++S V A ID+ +KC ++ + +LF E + D SM+ A
Sbjct: 323 CEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMA 382
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV 383
H G +A+ LF + E I P E + +L VE G++ L+ K ++
Sbjct: 383 IHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRK----KYSI 438
Query: 384 LAST-----LVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNGKVSVT 432
LAS +V++ ++ G + +A + + S W +++ G + +G +
Sbjct: 439 LASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 162/372 (43%), Gaps = 17/372 (4%)
Query: 145 PSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
PS + L L S H Q+H RIIR G++ ++ + + + YS SV
Sbjct: 8 PSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFE 67
Query: 205 TMKKIDIISWNSLMWA-CHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLD 263
+ WN L+ ++ E MR PD++T +M VCSN +
Sbjct: 68 RVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVR 127
Query: 264 KGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
G V ++GF + +V ++ +D + KC L + ++F E + T+++ +Y
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV 383
E+A +F L N+ +V L+ S + ++ +PK D +
Sbjct: 188 KSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLV----NAKKLFDEMPK----RDII 239
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
++++ YAK G + A +F E + D+ +W+ +++G A NG+ + +F E+ +
Sbjct: 240 SYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN 299
Query: 444 MAPDRITLAAVLLACNY-GSF-VDEGIKIFFSMETEFGVKPGEEHYTY--VVEMLSKAGM 499
+ PD + ++ AC+ G F + E + + + HY +++M +K G
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR----MNKFSSHYVVPALIDMNAKCGH 355
Query: 500 LKEAIDIVETMP 511
+ A + E MP
Sbjct: 356 MDRAAKLFEEMP 367
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 170/705 (24%), Positives = 299/705 (42%), Gaps = 147/705 (20%)
Query: 8 TQGPYTSLS-----------------------YCSTLLDHCLSQKSVNFVKIVHAHFLKL 44
+Q PYTS+S Y LL CL+ + + VHA L
Sbjct: 26 SQCPYTSISSPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQC---RQVHAQVL-- 80
Query: 45 GLNTYTY----LGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNA 100
L+ + + L + +Y+ LG + DA VF+ +S
Sbjct: 81 -LSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSL---------------------- 117
Query: 101 CQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSP 160
+ + D+ WNS++ S+G +ALEL+ M+ G+ + + L+
Sbjct: 118 ------VLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGY----ILPLILRA 167
Query: 161 CH-------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
C + H ++I+ G+ N+ + N L+ +Y K G + ++++ + M + +S
Sbjct: 168 CRYLGRFGLCRAFHTQVIQIGLK-ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMS 226
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS------------------- 254
WN ++ + E A+ F M+ E PD+ T ++++S
Sbjct: 227 WNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Query: 255 ----------------VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
VC+ L L ++V + K GF +A I ++ K +++
Sbjct: 287 MSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVK 346
Query: 299 DSVRLF------------------TEQDRWDTALC---------------------TSMI 319
D+ LF + + D AL TS+I
Sbjct: 347 DAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVI 406
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
G+D+L F + + C+LS + + +G +IH V +
Sbjct: 407 KGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMS 466
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
+ ++ + LV+MYAK G++ + +F + KDL+SWN+I+ G +G L +F +
Sbjct: 467 ENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Query: 440 IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGM 499
I G PD I L AVL AC++ V++G +IF+SM FG++P +EHY +V++L + G
Sbjct: 527 ISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGF 586
Query: 500 LKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQA 559
LKEA +IV+ MP + + +L+ C +H ++ + E +A ++ EP+ Y++L+
Sbjct: 587 LKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNI 646
Query: 560 YQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQL 604
Y GRWE VR ++K K+ G SW +K Y F S +
Sbjct: 647 YSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSI 691
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 2 YTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYS 61
Y L + G S + C ++++ + VH + +K G Y N + +Y
Sbjct: 281 YFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYG 340
Query: 62 DLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMP--------VRDVV 113
G + DA +F I +K SWN + + +G+L A LF + +VV
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSS-PCH--AKQVHGRI 170
+W S+I G G D+LE F +MQ + + +S T + S+ + P +++HG +
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 171 IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELA 230
IR+ M N+++ N+L+ MY K GL+ V ++ D+ISWNS++ G E A
Sbjct: 461 IRTSMS-ENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKA 519
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
L+ F +M + PD ++S CS+ ++KG+++F
Sbjct: 520 LSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIF 558
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 157/610 (25%), Positives = 276/610 (45%), Gaps = 72/610 (11%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
LL C V +I+HA +K G + + +Y + + DALKV D+
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDE----- 91
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
MP R + S N+ +SG NGF DA +F + +
Sbjct: 92 --------------------------MPERGIASVNAAVSGLLENGFCRDAFRMFGDARV 125
Query: 141 AGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSF 200
+G +S T + + Q+H ++SG ++ V +G SL++MY + G +
Sbjct: 126 SGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEM-EVYVGTSLVSMYSRCGEWVLAA 184
Query: 201 SVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRD-AELLPDQFTCSTLMSVCSNL 259
+ + ++++N+ + G L + F MR + P+ T ++ C++L
Sbjct: 185 RMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASL 244
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDTALCTSM 318
+L G+Q+ K F + ++V +A ID++SKC + + +FTE +D + S+
Sbjct: 245 LNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSV 304
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS------------------IF 360
IS + E A+ LF E ++P + L+S FS +
Sbjct: 305 ISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVM 364
Query: 361 LP-----------------VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
+P ++ G +IH V K E D + ++L+ MY K G+ A
Sbjct: 365 VPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARR 424
Query: 404 IFN--ETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
IF+ E K KD V WN ++ G +G+ +++F+ L E + P T AVL AC++
Sbjct: 425 IFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHC 484
Query: 462 SFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRL 521
V++G +IF M+ E+G KP EH ++++L ++G L+EA ++++ M + L
Sbjct: 485 GNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSL 544
Query: 522 ILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCT 581
L C H D + E A ++ E EP+ P P+++L+ Y + RWE + +R+ ++QK
Sbjct: 545 -LGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQL 603
Query: 582 KEFIGCSWFG 591
+ G S G
Sbjct: 604 VKLPGLSLSG 613
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 21/297 (7%)
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
P++FT L+ C+ L D+ +G+ + A K GF + ++A + ++ K ++ D++++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 304 FTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPV 363
E A + +S + DA +F V+ +L +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DI 145
Query: 364 EVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGL 423
E G+Q+H L K GFE + + ++LV MY++ G A +F + K +V++N + GL
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 424 AYNGKVSVTLDLFKELIRE--GMAPDRITLAAVLLAC------NYGSFVDEGI-KIFFSM 474
NG +++ +F L+R+ P+ +T + AC YG + + K F
Sbjct: 206 MENGVMNLVPSVFN-LMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 475 ETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGD 531
ET G T +++M SK K A + + T L W ++S +I+G
Sbjct: 265 ETMVG--------TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 242/479 (50%), Gaps = 6/479 (1%)
Query: 157 VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLI---AMYGKVGLVDYSFSVILTMKK-IDII 212
VSS +Q+H IR G+ +S+ LG LI + Y+ V ++K I++
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELL-PDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
WN+L+ G+ A + + +MR + L+ PD T L+ + + D+ G+ + +
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
+ GF V ++ + L++ C + + ++F + D S+I+ +A + E+A
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
L L+ + I+P + + LLS+ + + +G ++H + K+G + ++ L+ +
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL-IREGMAPDRIT 450
YA+ G +++A +F+E K+ VSW ++++GLA NG ++LFK + EG+ P IT
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 451 LAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+L AC++ V EG + F M E+ ++P EH+ +V++L++AG +K+A + +++M
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 511 PYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLV 570
P + +WR +L C +HGD + E +I++ EP Y++L+ Y RW +
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQ 446
Query: 571 RVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
++RK M + K+ G S + N V+ F H + +EGYV
Sbjct: 447 KIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 140/273 (51%), Gaps = 15/273 (5%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGM-RPSSFTFSILTSLVSSPCHAK---QV 166
+V WN++I GYA G S A L+ EM+ +G+ P + T+ L V++ + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH 226
H +IRSG S + + NSL+ +Y G V ++ V M + D+++WNS++ G
Sbjct: 144 HSVVIRSGFG-SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 227 HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSA 286
E ALA + +M + PD FT +L+S C+ + L GK+V + KVG N S+
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 287 AIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPT 346
+DL+++C R+E++ LF E ++ TS+I A + G++A+ LF + + T
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF-----KYMEST 317
Query: 347 EYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
E ++ C ++ I H + K GFE
Sbjct: 318 EGLLPCEITFVGILYACS-----HCGMVKEGFE 345
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
L+ + V + +H+ ++ G + Y+ N L LY++ G + A KVF
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVF------- 179
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
D MP +D+V+WNS+I+G+A NG +AL L+ EM
Sbjct: 180 ------------------------DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 141 AGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
G++P FT L S + + K+VH +I+ G+ N+ N L+ +Y + G V+
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT-RNLHSSNVLLDLYARCGRVE 274
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQFTCSTLMSVC 256
+ ++ M + +SW SL+ G + A+ F M E LLP + T ++ C
Sbjct: 275 EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 334
Query: 257 SNLRDLDKGKQVF 269
S+ + +G + F
Sbjct: 335 SHCGMVKEGFEYF 347
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 38/240 (15%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+LL C ++ K VH + +K+GL + N LDLY+ G + +A +FD++ K
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
NS SW S+I G A NGF +A+ELF M+
Sbjct: 287 NSVSW-------------------------------TSLIVGLAVNGFGKEAIELFKYME 315
Query: 140 GA-GMRPSSFTFSILTSLVSSPCHAKQ--VHGRIIRSGMDLSNVVLG-NSLIAMYGKVGL 195
G+ P TF + S K+ + R +R + + ++ + + G
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 196 VDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
V ++ I +M + +++ W +L+ AC H + LA F +++ +L P+ L+S
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGAC--TVHGDSDLAEFARIQILQLEPNHSGDYVLLS 433
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 238/476 (50%), Gaps = 36/476 (7%)
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
H +H +IIR+ D V+ LI + + VDY++ V + ++ + +++
Sbjct: 44 HVPSIHAKIIRTFHDQDAFVVF-ELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGF 102
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF---- 277
+G ++ +++M +LPD + ++++ C DL +++ A K+GF
Sbjct: 103 VSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSR 158
Query: 278 --------VY-------------------NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
+Y + + ++ I+ +S+C +++++ LF +
Sbjct: 159 SVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK 218
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
DT T+MI + AL LF EN+ E+ C+LS+ S +E+G +H
Sbjct: 219 DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVH 278
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVS 430
+ V E + + L++MY++ G I++A +F + KD++S+NT++ GLA +G
Sbjct: 279 SFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASV 338
Query: 431 VTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV 490
++ F++++ G P+++TL A+L AC++G +D G+++F SM+ F V+P EHY +
Sbjct: 339 EAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCI 398
Query: 491 VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP 550
V++L + G L+EA +E +P M +LS C IHG++++ E +AK + E E
Sbjct: 399 VDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDS 458
Query: 551 FPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
Y++L+ Y G+W+ +R+ M ++ GCS + N ++ F + H
Sbjct: 459 GTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAH 514
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 5/272 (1%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+HA LKLG + +G + +++Y G + +A K+FD++ ++ + + + + G
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+ A +LF + ++D V W +MI G N + ALELF EMQ + + FT + S
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 157 VSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
S + VH + M+LSN V GN+LI MY + G ++ + V M+ D+IS
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFV-GNALINMYSRCGDINEARRVFRVMRDKDVIS 323
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
+N+++ G A+ F M + P+Q T L++ CS+ LD G +VF
Sbjct: 324 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMK 383
Query: 274 KVGFVYNSIVSSAAI-DLFSKCNRLEDSVRLF 304
+V V I I DL + RLE++ R
Sbjct: 384 RVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFI 415
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/498 (29%), Positives = 245/498 (49%), Gaps = 12/498 (2%)
Query: 99 NACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTF-SILT-- 154
+A +LFD M RDV+SW+ +I Y + L+LF EM A P T S+L
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 155 SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISW 214
+++ + VHG IR G DL++V + NSLI MY K VD +F V +I+SW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 215 NSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
NS++ ++ AL F+ M + D+ T +L+ VC K + +
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
G+ N + S+ ID ++ C+ ++D+ + D C++MIS A ++A+ +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE-SDAVLASTLVHMYA 393
F +R+ P V LL++ S+ + H + + +D + +++V YA
Sbjct: 417 FC-HMRDT--PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473
Query: 394 KFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
K G I+ A F++ K+++SW I+ A NG L LF E+ ++G P+ +T A
Sbjct: 474 KCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLA 533
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
L ACN+G V +G+ IF SM E KP +HY+ +V+MLS+AG + A+++++ +P
Sbjct: 534 ALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPED 592
Query: 514 IT--LDMWRLILSVCVIH-GDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLV 570
+ W ILS C L + V E++E EP YL+ + + WE +
Sbjct: 593 VKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVA 652
Query: 571 RVRKDMEQKCTKEFIGCS 588
+R+ ++++ + G S
Sbjct: 653 MMRRLVKERKVRVVAGYS 670
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 228/455 (50%), Gaps = 35/455 (7%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
+K G L + + FD M RD VSWN ++ G GF + L F +++ G P++ T
Sbjct: 72 MKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL- 130
Query: 152 ILTSLVSSPCHA-----KQVHGRIIRSGM-DLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
LV C + +++HG +IRSG +S+V NS++ MY + + +
Sbjct: 131 ---VLVIHACRSLWFDGEKIHGYVIRSGFCGISSV--QNSILCMYADSDSLS-ARKLFDE 184
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDK 264
M + D+ISW+ ++ + ++ + L F +M +A+ PD T ++++ C+ + D+D
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDV 244
Query: 265 GKQVFAFCFKVGF-VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA 323
G+ V F + GF + + V ++ ID++SK ++ + R+F E + S+++ +
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 324 THDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIF---LPVEVGIQIHALVPKLGFES 380
+ ++AL +F L ++E + E V LL F LP + IH ++ + G+ES
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK---SIHGVIIRRGYES 361
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELI 440
+ V S+L+ Y ++DDA + + KD+VS +T++ GLA+ G+ + +F +
Sbjct: 362 NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM- 420
Query: 441 REGMAPDRITLAAVLLACNYGSFVD-----EGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
R+ P+ IT+ ++L AC+ + + GI I S+ + G T +V+ +
Sbjct: 421 RD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVG----TSIVDAYA 473
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
K G ++ A + + + W +I+S I+G
Sbjct: 474 KCGAIEMARRTFDQITEKNIIS-WTVIISAYAING 507
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 116/273 (42%), Gaps = 37/273 (13%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +H ++ G + + +D Y+ ++DA V D +++K+
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKD-------------- 393
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
VVS ++MISG A G S +A+ +F M+ P++ T L
Sbjct: 394 -----------------VVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLL 433
Query: 155 SLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
+ S +K HG IR + ++++ +G S++ Y K G ++ + + + +I
Sbjct: 434 NACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNI 493
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
ISW ++ A G + ALA F +M+ P+ T +S C++ + KG +F
Sbjct: 494 ISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKS 553
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
+ + S +D+ S+ ++ +V L
Sbjct: 554 MVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELI 586
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 59/237 (24%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLK--LGLNTYTYLGNRCLD 58
++ ++ T T +S LL+ C + K H ++ L +N + +G +D
Sbjct: 416 IFCHMRDTPNAITVIS----LLNACSVSADLRTSKWAHGIAIRRSLAINDIS-VGTSIVD 470
Query: 59 LYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSM 118
Y+ G I A + FD I+ KN ++SW +
Sbjct: 471 AYAKCGAIEMARRTFDQITEKN-------------------------------IISWTVI 499
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLS 178
IS YA NG AL LF EM+ G P++ T+ L +L S C+ HG +++ G+ +
Sbjct: 500 ISAYAINGLPDKALALFDEMKQKGYTPNAVTY--LAAL--SACN----HGGLVKKGLMIF 551
Query: 179 NVVLG----------NSLIAMYGKVGLVDYSFSVILTMK---KIDIISWNSLMWACH 222
++ + ++ M + G +D + +I + K +W +++ C
Sbjct: 552 KSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCR 608
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 246/502 (49%), Gaps = 36/502 (7%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
AK +H I++ G+ + L N+L+ +YGK G ++ V M D I+W S++ A +
Sbjct: 22 AKALHAHIVKLGI-VQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALN 80
Query: 223 RAGHHELALAHFYKMRDAELL-PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
+A L+ F + + L PD F S L+ C+NL +D G+QV + +
Sbjct: 81 QANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDE 140
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
+V S+ +D+++KC L + +F +T T+M+S YA E+AL LF + +
Sbjct: 141 VVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 342 NIRPTEYMVSCL------LSSFSIFLPVE--------------------------VGIQI 369
N+ ++S L +FS+F + G Q+
Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV 260
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
H LV LGF+S +++ L+ MYAK + A IF+ + +D+VSW ++++G+A +G+
Sbjct: 261 HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
L L+ +++ G+ P+ +T ++ AC++ FV++G ++F SM ++G++P +HYT
Sbjct: 321 EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 490 VVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMER-EPQ 548
++++L ++G+L EA +++ TMP+ W +LS C G Q+ +A ++ + +
Sbjct: 381 LLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK 440
Query: 549 APFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYG 608
P Y++L+ Y W + R+ + + ++ G S ++ F + + H
Sbjct: 441 DPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPL 500
Query: 609 GKDXXXXXXXXVWEMETE-GYV 629
+D EM GYV
Sbjct: 501 KEDIFRLLKKLEEEMRIRNGYV 522
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 9/257 (3%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S L+ C + S++ + VH HF+ + + +D+Y+ G +N A VFD I
Sbjct: 109 SALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRV 168
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
KN+ SW + G KSG+ A +LF +PV+++ SW ++ISG+ +G +A +F EM
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 139 QGAGMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
+ R +L+S+V + + +QVHG +I G D S V + N+LI MY K
Sbjct: 229 RRE--RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD-SCVFISNALIDMYAK 285
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
V + + M+ D++SW SL+ + G E ALA + M + P++ T L
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 253 MSVCSNLRDLDKGKQVF 269
+ CS++ ++KG+++F
Sbjct: 346 IYACSHVGFVEKGRELF 362
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 190/457 (41%), Gaps = 70/457 (15%)
Query: 22 LDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNS 81
L C +++ K +HAH +KLG+ L N +++Y G + AL+VFD++ H
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH--- 66
Query: 82 TSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDAL-ELFVEMQG 140
RD ++W S+++ S L
Sbjct: 67 ----------------------------RDHIAWASVLTALNQANLSGKTLSVFSSVGSS 98
Query: 141 AGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
+G+RP F FS L + S H +QVH I S ++ V+ +SL+ MY K GL++
Sbjct: 99 SGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY-ANDEVVKSSLVDMYAKCGLLN 157
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELAL-------------------------- 231
+ +V +++ + ISW +++ ++G E AL
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 232 -----AHFYKMRDAEL-LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
+ F +MR + + D S+++ C+NL G+QV +GF +S+
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISN 277
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP 345
A ID+++KC+ + + +F+ D TS+I A H E AL L+ + ++P
Sbjct: 278 ALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKP 337
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQI-HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
E L+ + S VE G ++ ++ G + L+ + + G++D+A ++
Sbjct: 338 NEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397
Query: 405 FNETKI-KDLVSWNTIMMGLAYNGKVSVTLDLFKELI 440
+ D +W ++ G+ + + + L+
Sbjct: 398 IHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 243/483 (50%), Gaps = 44/483 (9%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV--DYSFSVILTMKKIDIISWNSLMWAC 221
KQ+HG ++R G+D S +L LI K+G+ Y+ VI ++ + W +++
Sbjct: 66 KQIHGHVLRKGLDQSCYIL-TKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG---FV 278
G + A+A + MR E+ P FT S L+ C ++DL+ G+Q A F++ FV
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYA--------------- 323
Y V + ID++ KC ++ + ++F E D T +I++YA
Sbjct: 185 Y---VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 324 -THDL---------------GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI 367
T D+ ++AL F + IR E V+ +S+ + +
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301
Query: 368 QIHALVPKLGFESD--AVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAY 425
+ + K G+ V+ S L+ MY+K G +++A+++F K++ +++++++GLA
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 426 NGKVSVTLDLFKELIREG-MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGE 484
+G+ L LF ++ + + P+ +T L+AC++ VD+G ++F SM FGV+P
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 485 EHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIME 544
+HYT +V++L + G L+EA+++++TM +W +L C IH + ++ E A+ + E
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE 481
Query: 545 REPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKN-HVYTFQSNQ 603
EP Y++L+ Y G W ++RVRK +++K K+ SW KN ++ F
Sbjct: 482 LEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGN 541
Query: 604 LQH 606
L H
Sbjct: 542 LNH 544
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 159/309 (51%), Gaps = 7/309 (2%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
MY +++ + S ++ S LL C + K +N + HA +L + Y+GN +D+Y
Sbjct: 136 MYGCMRKEEITPVSFTF-SALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMY 194
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
I+ A KVFD++ ++ SW + + G + A +LF+ +P +D+V+W +M++
Sbjct: 195 VKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVT 254
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRI---IRSGMDL 177
G+A N +ALE F M+ +G+R T + S + +K + +SG
Sbjct: 255 GFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSP 314
Query: 178 SN-VVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHF-Y 235
S+ VV+G++LI MY K G V+ + +V ++M ++ +++S++ G + AL F Y
Sbjct: 315 SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHY 374
Query: 236 KMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV-GFVYNSIVSSAAIDLFSKC 294
+ E+ P+ T + CS+ +D+G+QVF ++ G + +DL +
Sbjct: 375 MVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRT 434
Query: 295 NRLEDSVRL 303
RL++++ L
Sbjct: 435 GRLQEALEL 443
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 175/430 (40%), Gaps = 75/430 (17%)
Query: 22 LDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHIND--ALKVFDDISHK 79
LD C++ +N +K +H H L+ GL+ Y+ + + + LG D A +V + + +
Sbjct: 56 LDDCIN---LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N W ++I GYA G +A+ ++ M+
Sbjct: 113 NPFLW-------------------------------TAVIRGYAIEGKFDEAIAMYGCMR 141
Query: 140 GAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+ P SFTFS L + +Q H + R V +GN++I MY K +
Sbjct: 142 KEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL-RGFCFVYVGNTMIDMYVKCESI 200
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHEL--------------------------- 229
D + V M + D+ISW L+ A R G+ E
Sbjct: 201 DCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNA 260
Query: 230 ----ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS--IV 283
AL +F +M + + D+ T + +S C+ L + K G+ + ++
Sbjct: 261 KPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVI 320
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF-VLTLREN 342
SA ID++SKC +E++V +F + + +SMI ATH ++ALHLF + +
Sbjct: 321 GSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTE 380
Query: 343 IRPTEYMVSCLLSSFSIFLPVEVGIQI-HALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
I+P L + S V+ G Q+ ++ G + + +V + + G + +A
Sbjct: 381 IKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440
Query: 402 LHIFNETKIK 411
L + ++
Sbjct: 441 LELIKTMSVE 450
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 226/433 (52%), Gaps = 2/433 (0%)
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCS 257
Y+ + M + DI+ +NS+ R + + F ++ + +LPD +T +L+ C+
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 258 NLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC-T 316
+ L++G+Q+ K+G N V I+++++C + DS R ++ +C
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV-DSARCVFDRIVEPCVVCYN 199
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
+MI+ YA + +AL LF + ++P E + +LSS ++ +++G IH K
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
F + + L+ M+AK G +DDA+ IF + + KD +W+ +++ A +GK ++ +F
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
+ + E + PD IT +L AC++ V+EG K F M ++FG+ P +HY +V++LS+
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 497 AGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVL 556
AG L++A + ++ +P + T +WR++L+ C H +L + E V++ I E + Y++L
Sbjct: 380 AGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVIL 439
Query: 557 AQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXX 616
+ Y +WE + +RK M+ + + GCS + N V+ F S
Sbjct: 440 SNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRAL 499
Query: 617 XXXVWEMETEGYV 629
V E++ GYV
Sbjct: 500 DEMVKELKLSGYV 512
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 164/330 (49%), Gaps = 6/330 (1%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N C + +S + A LF+ M D+V +NSM GY+ + LFVE+ G+
Sbjct: 68 NFCTESPTESS-MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL 126
Query: 145 PSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
P ++TF L ++ + +Q+H ++ G+D NV + +LI MY + VD +
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLD-DNVYVCPTLINMYTECEDVDSARC 185
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
V + + ++ +N+++ R AL+ F +M+ L P++ T +++S C+ L
Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGS 245
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISS 321
LD GK + + K F V++A ID+F+KC L+D+V +F + DT ++MI +
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305
Query: 322 YATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLGFES 380
YA H E ++ +F EN++P E LL++ S VE G + +V K G
Sbjct: 306 YANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKI 410
++V + ++ G ++DA ++ I
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDAYEFIDKLPI 395
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 278/544 (51%), Gaps = 51/544 (9%)
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
L K G++ A +LFDG+P RDVV+W +I+GY G +A ELF + R + T+
Sbjct: 56 LCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTW 112
Query: 151 SILTSLVSSPCHAKQVH-GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
T++VS +KQ+ ++ M NVV N++I Y + G +D + + M +
Sbjct: 113 ---TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+I+SWNS++ A + G + A+ F +M +++ + + ++ + +D+ +++F
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLF 225
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFT---EQD--RWDTALC--------- 315
C N I +A I +++ NR++++ +LF E+D W+T +
Sbjct: 226 D-CMPE---RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMN 281
Query: 316 -----------------TSMISSYATHDLGEDALHLFVLTLRE-NIRPTEYMVSCLLSSF 357
T+MI+ Y + E+AL++F LR+ +++P +LS+
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI--KDLVS 415
S + G QIH L+ K + + ++ S L++MY+K G + A +F+ + +DL+S
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
WN+++ A++G ++++ ++ + G P +T +L AC++ V++G++ F +
Sbjct: 402 WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVI 535
+ + EEHYT +V++ +AG LK+ + + ++ + ILS C +H ++ +
Sbjct: 462 RDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIA 521
Query: 536 ETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW--FGMK 593
+ V K+++E Y++++ Y G+ E +R M++K K+ GCSW G +
Sbjct: 522 KEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQ 581
Query: 594 NHVY 597
NH++
Sbjct: 582 NHLF 585
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 184/395 (46%), Gaps = 11/395 (2%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N +D Y+ G I+ AL++FD++ +N SWN +K L++ G++ A LF+ MP RDVV
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRS 173
SW +M+ G A NG +A LF M P S + + + +
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCM------PERNIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 174 GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAH 233
M + N++I + + ++ + + M + ++ISW +++ +E AL
Sbjct: 258 VMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNV 317
Query: 234 FYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFS 292
F KM RD + P+ T +++S CS+L L +G+Q+ K N IV+SA ++++S
Sbjct: 318 FSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYS 377
Query: 293 KCNRLEDSVRLFTEQ--DRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMV 350
K L + ++F + D SMI+ YA H G++A+ ++ + +P+
Sbjct: 378 KSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Query: 351 SCLLSSFSIFLPVEVGIQ-IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
LL + S VE G++ LV + LV + + G + D + N
Sbjct: 438 LNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDD 497
Query: 410 IKDLVS-WNTIMMGLAYNGKVSVTLDLFKELIREG 443
+ S + I+ + +VS+ ++ K+++ G
Sbjct: 498 ARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG 532
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/588 (24%), Positives = 268/588 (45%), Gaps = 48/588 (8%)
Query: 51 YLGNRCLDLYSDLGHIND--ALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMP 108
+L + LD Y D+ + + + +D+ +S + ++ + +A ++FD +P
Sbjct: 43 FLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKL-MRAYASLKDVASARKVFDEIP 101
Query: 109 VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHA----- 163
R+V+ N MI Y +NGF + +++F M G +RP +TF + L + C
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCV--LKACSCSGTIVIG 159
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
+++HG + G+ S + +GN L++MYGK G + + V+ M + D++SWNSL+ +
Sbjct: 160 RKIHGSATKVGLS-STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL--RDLDKGKQVFAFCFKVGFVYNS 281
+ AL +M ++ D T ++L+ SN ++ K +F FK+G S
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF---FKMG--KKS 273
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
+VS W+ MI Y + + +A+ L+ +
Sbjct: 274 LVS-------------------------WNV-----MIGVYMKNAMPVEAVELYSRMEAD 303
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
P ++ +L + + +G +IH + + + +L + L+ MYAK G ++ A
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 402 LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
+F K +D+VSW ++ ++G+ + LF +L G+ PD I L AC++
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 462 SFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRL 521
++EG F M + + P EH +V++L +AG +KEA ++ M +W
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 522 ILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCT 581
+L C +H D + A ++ + P+ Y++L+ Y GRWE + +R M+ K
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 582 KEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
K+ G S + ++TF H + V +M+ GYV
Sbjct: 544 KKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 250/501 (49%), Gaps = 6/501 (1%)
Query: 100 ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSS 159
A +LFD M R++ N ++ + G S E+++ M+ G+ + T+ + S
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 160 P---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNS 216
KQ+H +++SG ++SN+ + N L+ Y G + S + + D+ISWNS
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
++ C G +L F KM+ P + ++ CS D+ GKQ+ + K+G
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMG 345
Query: 277 FVYNSI-VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
F +S+ V SA ID++ KCN +E+S L+ + C S+++S + +D + +F
Sbjct: 346 FDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMF 405
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLP--VEVGIQIHALVPKLGFESDAVLASTLVHMYA 393
L + E E +S +L + S+ LP + +H K G+ +D ++ +L+ Y
Sbjct: 406 GLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYT 465
Query: 394 KFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
K G + + +F+E ++ +I+ G A NG + + + +E+ R + PD +T+ +
Sbjct: 466 KSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILS 525
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
VL C++ V+EG IF S+E+++G+ PG + Y +V++L +AG++++A ++
Sbjct: 526 VLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGD 585
Query: 514 ITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVR 573
W +L C IH + + A+ +M EP+ Y+ +++ Y +G +E ++R
Sbjct: 586 ADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIR 645
Query: 574 KDMEQKCTKEFIGCSWFGMKN 594
+ + IG S +KN
Sbjct: 646 EIAASRELMREIGYSSVVVKN 666
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 184/372 (49%), Gaps = 6/372 (1%)
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
L+KSG L +A + FD M VRDVV++N +ISG + G S A+EL+ EM G+R S+ TF
Sbjct: 56 LIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTF 115
Query: 151 SILTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
+ S+ S + QVH R+I G N+ + ++L+ +Y + LVD + + M
Sbjct: 116 PSVLSVCSDELFCREGIQVHCRVISLGFG-CNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
++ N L+ + G + + +M + + T ++ CS+ R + +GKQ
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 268 VFAFCFKVGF-VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
+ + K G+ + N V++ +D +S C L S+R F D S++S A +
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV-LA 385
D+L LF RP+ L+ S ++ G QIH V K+GF+ ++ +
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 386 STLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
S L+ MY K I+++ ++ +L N++M L + G +++F +I EG
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTG 414
Query: 446 PDRITLAAVLLA 457
D +TL+ VL A
Sbjct: 415 IDEVTLSTVLKA 426
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 3/246 (1%)
Query: 288 IDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTE 347
ID K L + F E D +IS + + A+ L+ + +R +
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 348 YMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE 407
+LS S L GIQ+H V LGF + + S LV +YA ++D AL +F+E
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 408 TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEG 467
++L N ++ G+ +++ + EG+A + +T ++ C++ V EG
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 468 IKIFFSMETEFGVKPGEEHYTYV-VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVC 526
K S+ + G V V+ S G L ++ +P + W I+SVC
Sbjct: 233 -KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS-WNSIVSVC 290
Query: 527 VIHGDL 532
+G +
Sbjct: 291 ADYGSV 296
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 127/298 (42%), Gaps = 18/298 (6%)
Query: 70 LKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSS 129
LK+ D+S + S I + G K + N+ L+ +P ++ NS+++ G +
Sbjct: 342 LKMGFDVSSLHVQSALIDMYG--KCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITK 399
Query: 130 DALELFVEMQGAGMRPSSFTFSIL-----TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGN 184
D +E+F M G T S + SL S VH I+SG ++V +
Sbjct: 400 DIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGY-AADVAVSC 458
Query: 185 SLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP 244
SLI Y K G + S V + +I S++ R G + +M L+P
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIP 518
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVF-AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
D+ T +++S CS+ +++G+ +F + K G + + +DL + +E + RL
Sbjct: 519 DEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERL 578
Query: 304 FTE-QDRWDTALCTSMISSYATH---DLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
+ + D +S++ S H +G A + + N+ P + V +S F
Sbjct: 579 LLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLM-----NLEPENFAVYIQVSKF 631
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 228/467 (48%), Gaps = 6/467 (1%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
A V+GR M N + N LI Y + G + + V M + +WN+++
Sbjct: 13 AVAVYGR-----MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLI 67
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
+ +E L+ F +M PD++T ++ S + LR + G+Q+ + K G + +
Sbjct: 68 QFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLV 127
Query: 283 VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLREN 342
V+S+ ++ + +L+D + + ++I A + E L+L+ +
Sbjct: 128 VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 187
Query: 343 IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDAL 402
RP + +LSS S G QIHA K+G S + S+L+ MY+K G + DA
Sbjct: 188 CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAA 247
Query: 403 HIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE-GMAPDRITLAAVLLACNYG 461
F+E + +D V W++++ ++G+ ++LF + + M + + +L AC++
Sbjct: 248 KAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS 307
Query: 462 SFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRL 521
D+G+++F M ++G KPG +HYT VV++L +AG L +A I+ +MP + +W+
Sbjct: 308 GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 367
Query: 522 ILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCT 581
+LS C IH + ++ + V KEI++ +P Y++LA + RW + VRK M K
Sbjct: 368 LLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNV 427
Query: 582 KEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGY 628
K+ G SWF K V+ F+ K+ EM+ +GY
Sbjct: 428 KKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 474
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 207/391 (52%), Gaps = 7/391 (1%)
Query: 57 LDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWN 116
+ +YS LG A+ V+ + KN S NI + G +++G L NA ++FD MP R + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 117 SMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRS 173
+MI+G F+ + L LF EM G G P +T + ++ + S +Q+HG I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 174 GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAH 233
G++L ++V+ +SL MY + G + VI +M ++++WN+L+ + G E L
Sbjct: 121 GLEL-DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 234 FYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK 293
+ M+ + P++ T T++S CS+L +G+Q+ A K+G V S+ I ++SK
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 294 CNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF-VLTLRENIRPTEYMVSC 352
C L D+ + F+E++ D + +SMIS+Y H G++A+ LF + + N+ E
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 353 LLSSFSIFLPVEVGIQI-HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK 411
LL + S + G+++ +V K GF+ + +V + + G +D A I IK
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 412 -DLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
D+V W T++ + + +FKE+++
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 241/497 (48%), Gaps = 5/497 (1%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K +LG+A LF M + VSWN+MI Y+ +G +A+ +F M + S T
Sbjct: 198 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVT--- 254
Query: 153 LTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
+ +L+S+ + +H +++ GM ++++ + SL+ Y + G + + + + K+ I+
Sbjct: 255 IINLLSAHVSHEPLHCLVVKCGM-VNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIV 313
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
S++ G ++A+ +F K R + D ++ C +D G + +
Sbjct: 314 GLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYA 373
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
K G ++V + I ++SK + +E + LF + S+IS A
Sbjct: 374 IKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAF 433
Query: 333 HLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
+F + L + P ++ LL+ S + +G ++H + FE++ + + L+ M
Sbjct: 434 EVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDM 493
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
YAK G A +F K +WN+++ G + +G L + E+ +G+ PD IT
Sbjct: 494 YAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 553
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
VL ACN+G FVDEG F +M EFG+ P +HY +V +L +A + EA+ ++ M
Sbjct: 554 LGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD 613
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVR 571
+W +LS C+IH +L+V E VA+++ + + Y++++ Y W+ +VR
Sbjct: 614 IKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVR 673
Query: 572 VRKDMEQKCTKEFIGCS 588
VR M+ ++G S
Sbjct: 674 VRNMMKDNGYDGYLGVS 690
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 229/500 (45%), Gaps = 54/500 (10%)
Query: 34 VKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLK 93
V+ V H K GL+ + Y+ L+LY LK
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLY-------------------------------LK 97
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
G + +A LFD MP RD V WN++I GY+ NG+ DA +LF+ M G PS+ T L
Sbjct: 98 KGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNL 157
Query: 154 TSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
+ VHG +SG++L + V N+LI+ Y K + + + MK
Sbjct: 158 LPFCGQCGFVSQGRSVHGVAAKSGLELDSQV-KNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
+SWN+++ A ++G E A+ F M + + T L+S + L
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLH------C 270
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGED 330
K G V + V ++ + +S+C L + RL+ + TS++S YA +
Sbjct: 271 LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDI 330
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVH 390
A+ F T + ++ + +L +++G+ +H K G + ++ + L+
Sbjct: 331 AVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLIT 390
Query: 391 MYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE-LIREGMAPDRI 449
MY+KF ++ L +F + + L+SWN+++ G +G+ S ++F + ++ G+ PD I
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 450 TLAAVLLACNYGSFVDEGIKIF-FSMETEFGVKPGEEHY--TYVVEMLSKAGMLKEAIDI 506
T+A++L C+ ++ G ++ +++ F E++ T +++M +K G +A +
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGNEVQAESV 506
Query: 507 VETM--PYTITLDMWRLILS 524
+++ P T T W ++S
Sbjct: 507 FKSIKAPCTAT---WNSMIS 523
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 22/443 (4%)
Query: 110 RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL-----TSLVSSPCHAK 164
RD+ ++S++ SS + +F ++ + + P+ FT SI TS S +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
QV + +SG+D V + SL+ +Y K G V + + M + D + WN+L+ R
Sbjct: 71 QVQTHLTKSGLD-RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
G+ A F M P T L+ C + +G+ V K G +S V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
+A I +SKC L + LF E T +MI +Y+ L E+A+ +F +N+
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
+ + LLS+ P +H LV K G +D + ++LV Y++ G + A +
Sbjct: 250 ISPVTIINLLSAHVSHEP------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 405 FNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFV 464
+ K +V +I+ A G + + + F + + M D + L +L C S +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 465 DEGIKIFFSMETEFGVKPGEEHYTYVVE----MLSKAGMLKEAIDIVETMPYTITLDMWR 520
D G+ + + +K G T VV M SK ++ + + E + T L W
Sbjct: 364 DIGMSLH-----GYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQET-PLISWN 417
Query: 521 LILSVCVIHGDLQVIETVAKEIM 543
++S CV G V ++M
Sbjct: 418 SVISGCVQSGRASTAFEVFHQMM 440
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 34/252 (13%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C ++ +H + +K GL T T + N + +YS + L +F+ +
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
SWN + G ++SG+ A ++F M M++G
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQM----------MLTG------------------- 443
Query: 141 AGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
G+ P + T + L + S C K++HG +R+ + N V +LI MY K G
Sbjct: 444 -GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVC-TALIDMYAKCGNEV 501
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCS 257
+ SV ++K +WNS++ +G AL+ + +MR+ L PD+ T ++S C+
Sbjct: 502 QAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACN 561
Query: 258 NLRDLDKGKQVF 269
+ +D+GK F
Sbjct: 562 HGGFVDEGKICF 573
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 244/482 (50%), Gaps = 10/482 (2%)
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRI 170
S+N+++S YA + + G P FTF + S KQ+HG +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 171 IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELA 230
+ G ++ + NSL+ YG G + V M D++SW ++ R G ++ A
Sbjct: 133 TKMGF-YDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
L F KM D E P+ T ++ + L GK + K + + +A ID+
Sbjct: 192 LDTFSKM-DVE--PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 291 FSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF-VLTLRENIRPTEYM 349
+ KC +L D++R+F E ++ D SMIS + ++A+ LF ++ I+P ++
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 350 VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
++ +LS+ + V+ G +H + G + D + + +V MYAK G I+ AL IFN +
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIK 469
K++ +WN ++ GLA +G +L F+E+++ G P+ +T A L AC + VDEG +
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 470 IFFSMET-EFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVI 528
F M++ E+ + P EHY ++++L +AG+L EA+++V+ MP + + ILS C
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 529 HGDL-QVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGC 587
G L ++ + + ++ E + Y++L+ + RW+ + R+R+ M+ K + G
Sbjct: 489 RGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGS 548
Query: 588 SW 589
S+
Sbjct: 549 SY 550
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 192/421 (45%), Gaps = 65/421 (15%)
Query: 73 FDDISHKNSTS--WNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSD 130
+DDI +NS + +C G+ NAC++F MPVRDVVSW +I+G+ G +
Sbjct: 138 YDDIYVQNSLVHFYGVC-------GESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 131 ALELFVEMQGAGMRPSSFTF-SILTSLVSSPCHA--KQVHGRIIRSGMDLSNVVLGNSLI 187
AL+ F +M + P+ T+ +L S C + K +HG I++ L ++ GN+LI
Sbjct: 191 ALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA-SLISLETGNALI 246
Query: 188 AMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQ 246
MY K + + V ++K D +SWNS++ + A+ F M+ + + PD
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 247 FTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
++++S C++L +D G+ V + G +++ + +A +D+++KC +E ++ +F
Sbjct: 307 HILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 307 QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG 366
+ +++ A H G ++L F E MV
Sbjct: 367 IRSKNVFTWNALLGGLAIHGHGLESLRYF-----------EEMV---------------- 399
Query: 367 IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD------LVSWNTIM 420
KLGF+ + V ++ G++D+ F++ K ++ L + ++
Sbjct: 400 --------KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC-NYGSFVD---EGIKIFFSMET 476
L G + L+L K + + PD A+L AC N G+ ++ E + F +E
Sbjct: 452 DLLCRAGLLDEALELVKAM---PVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEF 508
Query: 477 E 477
E
Sbjct: 509 E 509
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 42/233 (18%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
+++ ++ + G +++L C S +V+ + VH + L G+ T++G +D+Y
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
+ G+I AL++F+ I KN +WN L GL
Sbjct: 352 AKCGYIETALEIFNGIRSKNVFTWNALLGGL----------------------------- 382
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV-HGRIIRSGMDLSN 179
A +G ++L F EM G +P+ TF + +++ CH V GR M
Sbjct: 383 --AIHGHGLESLRYFEEMVKLGFKPNLVTF---LAALNACCHTGLVDEGRRYFHKMKSRE 437
Query: 180 VVLGNSL------IAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAG 225
L L I + + GL+D + ++ M K D+ +++ AC G
Sbjct: 438 YNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRG 490
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 240/497 (48%), Gaps = 6/497 (1%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSS---PCHAKQVHGRII 171
WN + A S+++ L+ M +G P +F+F + +S P +Q+H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 172 RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS--WNSLMWACHRAGHHEL 229
+ G + VL +LI+MY K GLV + V + +S +N+L+
Sbjct: 81 KGGCETEPFVL-TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAID 289
A F +M++ + D T L+ +C+ L G+ + C K G V ++ I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 290 LFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYM 349
++ KC +E RLF E ++IS Y+ + L D L L+ + P +
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 350 VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
+ +LSS + ++G ++ LV GF + +++ + MYA+ G + A +F+
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIK 469
+K LVSW ++ +G + L LF ++I+ G+ PD VL AC++ D+G++
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 470 IFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIH 529
+F +M+ E+ ++PG EHY+ +V++L +AG L EA++ +E+MP +W +L C IH
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 530 GDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
++ + E +++E EP Y++++ Y E + R+R M ++ ++ G S+
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499
Query: 590 FGMKNHVYTFQSNQLQH 606
K V+ F + H
Sbjct: 500 VEHKGRVHLFLAGDRSH 516
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 204/461 (44%), Gaps = 42/461 (9%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H H K G T ++ + +Y G + DA KVF++ + S+ ++C
Sbjct: 75 LHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEE--NPQSSQLSVC--------- 123
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+N++ISGY +N +DA +F M+ G+ S T L L
Sbjct: 124 ------------------YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPL 165
Query: 157 VSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
+ P + + +HG+ ++ G+D S V + NS I MY K G V+ + M +I+
Sbjct: 166 CTVPEYLWLGRSLHGQCVKGGLD-SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLIT 224
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
WN+++ + G L + +M+ + + PD FT +++S C++L G +V
Sbjct: 225 WNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVE 284
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
GFV N VS+A+I ++++C L + +F T+MI Y H +GE L
Sbjct: 285 SNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLM 344
Query: 334 LFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI-HALVPKLGFESDAVLASTLVHMY 392
LF ++ IRP + +LS+ S + G+++ A+ + E S LV +
Sbjct: 345 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 404
Query: 393 AKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
+ G +D+A+ ++ D W ++ + V + F ++I P+ I
Sbjct: 405 GRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGY 462
Query: 452 AAVLLACNYGSFVDEGI-KIFFSM-ETEFGVKPGEEHYTYV 490
++ S EGI +I M E F KPG Y+YV
Sbjct: 463 YVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG---YSYV 500
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 267/555 (48%), Gaps = 13/555 (2%)
Query: 61 SDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWN 116
++LG + A V I+ K + T N L K G L ++ ++F+ + ++ VSW
Sbjct: 213 AELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT 272
Query: 117 SMISGYASNGFSSDALELFVEMQGAGMRPSSFT-FSILTS--LVSSPCHAKQVHGRIIRS 173
+MIS Y FS AL F EM +G+ P+ T +S+L+S L+ K VHG +R
Sbjct: 273 AMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR 332
Query: 174 GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAH 233
+D + L +L+ +Y + G + +V+ + +I++WNSL+ G AL
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGL 392
Query: 234 FYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK 293
F +M + PD FT ++ +S C N + GKQ+ + V + V ++ ID++SK
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSK 451
Query: 294 CNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCL 353
++ + +F + SM+ ++ + +A+ LF + E +
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAV 511
Query: 354 LSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDL 413
+ + S +E G +H + G + D + L+ MYAK G ++ A +F + +
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSI 570
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFS 473
VSW++++ +G++ + F +++ G P+ + VL AC + V+EG K +F+
Sbjct: 571 VSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFN 629
Query: 474 METEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQ 533
+ FGV P EH+ +++LS++G LKEA ++ MP+ +W +++ C IH +
Sbjct: 630 LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMD 689
Query: 534 VIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMK 593
+I+ + ++ + Y +L+ Y G WE R+R M+ K+ G S +
Sbjct: 690 IIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Query: 594 NHVYTF---QSNQLQ 605
V+ F + N++Q
Sbjct: 750 QKVFRFGAGEENRIQ 764
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 200/386 (51%), Gaps = 8/386 (2%)
Query: 86 ICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRP 145
+C+ G ++G L +A ++FDGMPVRD+V+W++++S NG AL +F M G+ P
Sbjct: 143 LCMYG--QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP 200
Query: 146 SSFT-FSILTSLVSSPCH--AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSV 202
+ T S++ C A+ VHG+I R DL L NSL+ MY K G + S +
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET-LCNSLLTMYSKCGDLLSSERI 259
Query: 203 ILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDL 262
+ K + +SW +++ + +R E AL F +M + + P+ T +++S C + +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 263 DKGKQVFAFCFKVGFVYN-SIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISS 321
+GK V F + N +S A ++L+++C +L D + + S+IS
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 322 YATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESD 381
YA + AL LF + + I+P + ++ +S+ V +G QIH V + SD
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SD 438
Query: 382 AVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
+ ++L+ MY+K G +D A +FN+ K + +V+WN+++ G + NG + LF +
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 442 EGMAPDRITLAAVLLACNYGSFVDEG 467
+ + +T AV+ AC+ +++G
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKG 524
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 177/373 (47%), Gaps = 6/373 (1%)
Query: 103 LFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSLVSSPC 161
+F+ P D + +I A++L+ + + S F F S+L + S
Sbjct: 56 VFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSRE 115
Query: 162 H---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
H +VHGRII+ G+D + V+ SL+ MYG+ G + + V M D+++W++L+
Sbjct: 116 HLSVGGKVHGRIIKGGVD-DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLV 174
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV 278
+C G AL F M D + PD T +++ C+ L L + V + F
Sbjct: 175 SSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD 234
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLT 338
+ + ++ + ++SKC L S R+F + + + T+MISSY + E AL F
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 339 LRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESD-AVLASTLVHMYAKFGI 397
++ I P + +LSS + + G +H + + + L+ LV +YA+ G
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 398 IDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
+ D + +++V+WN+++ A+ G V L LF++++ + + PD TLA+ + A
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 458 CNYGSFVDEGIKI 470
C V G +I
Sbjct: 415 CENAGLVPLGKQI 427
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 227/438 (51%), Gaps = 1/438 (0%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
K+V+G ++ +G + ++ N ++ M+ K G++ + + + + ++ S+ S++
Sbjct: 143 KRVYGFMMSNGFEPEQYMM-NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN 201
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
G++ A F M + + T + ++ + L + GKQ+ K+G V N+ V
Sbjct: 202 FGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV 261
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
S ID++SKC +ED+ F T ++I+ YA H E+AL L +
Sbjct: 262 SCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV 321
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
++ +S ++ + +E+ Q HA + + GFES+ V + LV Y+K+G +D A +
Sbjct: 322 SIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARY 381
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
+F++ K+++SWN +M G A +G+ + + LF+++I +AP+ +T AVL AC Y
Sbjct: 382 VFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGL 441
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
++G +IF SM G+KP HY ++E+L + G+L EAI + P T++MW +L
Sbjct: 442 SEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALL 501
Query: 524 SVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKE 583
+ C + +L++ VA+++ P+ Y+V+ Y MG+ V + +E K
Sbjct: 502 NACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSM 561
Query: 584 FIGCSWFGMKNHVYTFQS 601
C+W + + ++F S
Sbjct: 562 MPACTWVEVGDQTHSFLS 579
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 199/435 (45%), Gaps = 39/435 (8%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
L++ C+ KS+ VK V+ + G Y+ NR L ++ G I DA +
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARR-------- 179
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
LFD +P R++ S+ S+ISG+ + G +A ELF M
Sbjct: 180 -----------------------LFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMW 216
Query: 140 GAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+ TF+++ ++ + S KQ+H ++ G+ + N + LI MY K G +
Sbjct: 217 EELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV-VDNTFVSCGLIDMYSKCGDI 275
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+ + M + ++WN+++ G+ E AL Y MRD+ + DQFT S ++ +
Sbjct: 276 EDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIS 335
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
+ L L+ KQ A + GF + ++A +D +SK R++ + +F + R +
Sbjct: 336 TKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWN 395
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
+++ YA H G DA+ LF + N+ P +LS+ + E G +I + ++
Sbjct: 396 ALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEV 455
Query: 377 -GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNGKVSVTLD 434
G + A+ + ++ + + G++D+A+ +K V+ W ++ + +
Sbjct: 456 HGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRV 515
Query: 435 LFKELIREGMAPDRI 449
+ ++L GM P+++
Sbjct: 516 VAEKLY--GMGPEKL 528
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 247/504 (49%), Gaps = 9/504 (1%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA-GMRPS-SFTF 150
K G+L A ++FD MP RD+V+WN+MISG++ + +D + LF++M+ G+ P+ S
Sbjct: 150 KCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV 209
Query: 151 SILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+ +L + K VHG R G +++V+ ++ +Y K + Y+ V K
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGFS-NDLVVKTGILDVYAKSKCIIYARRVFDLDFK 268
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKM--RDAELLPDQFTCSTLMSVCSNLRDLDKGK 266
+ ++W++++ + A F++M D + ++ C+ DL G+
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
V + K GF+ + V + I ++K L D+ R F+E D S+I+ +
Sbjct: 329 CVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNC 388
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
E++ LF IRP + +L++ S + G H G+ + + +
Sbjct: 389 RPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN 448
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
L+ MY K G +D A +F+ +D+VSWNT++ G +G L LF + G+ P
Sbjct: 449 ALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNP 508
Query: 447 DRITLAAVLLACNYGSFVDEGIKIFFSM-ETEFGVKPGEEHYTYVVEMLSKAGMLKEAID 505
D +TL A+L AC++ VDEG ++F SM +F V P +HY + ++L++AG L EA D
Sbjct: 509 DEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYD 568
Query: 506 IVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGR 565
V MP+ + + +LS C + + ++ V+K+ M+ + ++L+ Y R
Sbjct: 569 FVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKK-MQSLGETTESLVLLSNTYSAAER 627
Query: 566 WESLVRVRKDMEQKCTKEFIGCSW 589
WE R+R +++ + G SW
Sbjct: 628 WEDAARIRMIQKKRGLLKTPGYSW 651
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 245/524 (46%), Gaps = 51/524 (9%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLK--LGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
+LL+ C+ +++ +++H H LK L L++ T L N LY+ + A VFD+I
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIP 62
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
H P + ++W+ MI YASN F+ AL+L+ +
Sbjct: 63 H-----------------------------PRINPIAWDLMIRAYASNDFAEKALDLYYK 93
Query: 138 MQGAGMRPSSFTFSILTSLVSSPCHAKQV--HGRIIRSGMDLS----NVVLGNSLIAMYG 191
M +G+RP+ +T+ V C + G++I S ++ S ++ + +L+ Y
Sbjct: 94 MLNSGVRPTKYTY----PFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYA 149
Query: 192 KVGLVDYSFSVILTMKKIDIISWNSLM--WACHRAGHHELALAHFYKMRDAE-LLPDQFT 248
K G ++ + V M K D+++WN+++ ++ H + L F MR + L P+ T
Sbjct: 150 KCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL--FLDMRRIDGLSPNLST 207
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
+ L +GK V +C ++GF + +V + +D+++K + + R+F
Sbjct: 208 IVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDF 267
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFV-LTLRENIR-PTEYMVSCLLSSFSIFLPVEVG 366
+ + ++MI Y +++ ++A +F + + +N+ T + +L + F + G
Sbjct: 268 KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGG 327
Query: 367 IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYN 426
+H K GF D + +T++ YAK+G + DA F+E +KD++S+N+++ G N
Sbjct: 328 RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVN 387
Query: 427 GKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEH 486
+ + LF E+ G+ PD TL VL AC++ + + G G
Sbjct: 388 CRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC-HGYCVVHGYAVNTSI 446
Query: 487 YTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
+++M +K G L A + +TM + + W +L IHG
Sbjct: 447 CNALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIHG 489
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N++ N + K G+L A ++FD M RD+VSWN+M+ G+ +G +AL LF MQ
Sbjct: 443 NTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ 502
Query: 140 GAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYS 199
G+ P T + S S H ++ G L N +
Sbjct: 503 ETGVNPDEVTLLAILSACS--------HSGLVDEGKQLFN--------------SMSRGD 540
Query: 200 FSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
F+VI +ID +N + RAG+ + A KM PD TL+S C
Sbjct: 541 FNVI---PRID--HYNCMTDLLARAGYLDEAYDFVNKM---PFEPDIRVLGTLLSACWTY 592
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR 309
++ + G +V +G S+V + + +S R ED+ R+ Q +
Sbjct: 593 KNAELGNEVSKKMQSLGETTESLVLLS--NTYSAAERWEDAARIRMIQKK 640
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 40/554 (7%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTF 150
L+ G++ A LF M +D+VSWN +I+GYASN A +LF + G + P S T
Sbjct: 274 LRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTI 333
Query: 151 -SILT--SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
SIL + ++ K++H I+R L + +GN+LI+ Y + G ++ M
Sbjct: 334 ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS 393
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
DIISWN+++ A + L + + + + D T +L+ C N++ + K K+
Sbjct: 394 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE 453
Query: 268 VFAFCFKVGFVYNS---IVSSAAIDLFSKCNRLE-------------------------- 298
V + K G +++ + +A +D ++KC +E
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 299 ------DSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSC 352
D+ LFTE D + M+ YA +A+ +F +RP +
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMN 573
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
LL + + + Q H + + G D L TL+ +YAK G + A +F +D
Sbjct: 574 LLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRD 632
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF 472
LV + ++ G A +G+ L ++ + + PD + + +L AC + + +G++I+
Sbjct: 633 LVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYD 692
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDL 532
S+ T G+KP E Y V+++++ G L +A V MP ++W +L C + +
Sbjct: 693 SIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRM 752
Query: 533 QVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGM 592
+ +VA +++ E +++++ Y +WE ++ +R M++K K+ GCSW +
Sbjct: 753 DLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV 812
Query: 593 KNHVYTFQSNQLQH 606
F S H
Sbjct: 813 DGQRNVFVSGDCSH 826
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 168/333 (50%), Gaps = 23/333 (6%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGL---NTYTYLGNRCLDLYSDLGHINDALKVFDDI 76
+LL C++ + + VK VH + +K GL LGN LD Y+ G++ A K+F +
Sbjct: 437 SLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGL 496
Query: 77 SHKNS-TSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELF 135
S + + S+N L G + SG +A LF M D+ +W+ M+ YA + ++A+ +F
Sbjct: 497 SERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVF 556
Query: 136 VEMQGAGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
E+Q GMRP++ T L + ++S +Q HG IIR G L ++ L +L+ +Y K
Sbjct: 557 REIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG--LGDIRLKGTLLDVYAK 614
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
G + +++SV + + D++ + +++ G + AL + M ++ + PD +T+
Sbjct: 615 CGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTM 674
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSA-AIDLFSKCNRLEDSVRLFTE----- 306
++ C + + G Q++ V + ++ A A+DL ++ RL+D+ T+
Sbjct: 675 LTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEP 734
Query: 307 -QDRWDTAL--CTSMISSYATHDLGED-ALHLF 335
+ W T L CT +Y DLG A HL
Sbjct: 735 NANIWGTLLRACT----TYNRMDLGHSVANHLL 763
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 123/250 (49%), Gaps = 30/250 (12%)
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
++ C+++ DL G+ + FK+G + S VS + +++++KC R++D ++F + D D
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 312 TALCTSMISSYATHDLGEDALHLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEV----- 365
+ +++ + G + + F + + +P+ +F+I LP+ V
Sbjct: 87 PVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSV-------TFAIVLPLCVRLGDS 138
Query: 366 --GIQIHALVPKLGFESDAVLASTLVHMYAKFG-IIDDALHIFNETKIKDLVSWNTIMMG 422
G +H+ + K G E D ++ + LV MYAKFG I DA F+ KD+VSWN I+ G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 423 LAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKP 482
+ N ++ F +++E P+ T+A VL C SM+ +
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA-------------SMDKNIACRS 245
Query: 483 GEEHYTYVVE 492
G + ++YVV+
Sbjct: 246 GRQIHSYVVQ 255
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 178/382 (46%), Gaps = 23/382 (6%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTFS 151
K ++ + ++F M D V WN +++G S + + F M A +PSS TF+
Sbjct: 68 KCRRMDDCQKMFRQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFA 126
Query: 152 ILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV-DYSFSVILTMK 207
I+ L + + K +H II++G++ + ++GN+L++MY K G + +++ +
Sbjct: 127 IVLPLCVRLGDSYNGKSMHSYIIKAGLE-KDTLVGNALVSMYAKFGFIFPDAYTAFDGIA 185
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD---LDK 264
D++SWN+++ A F M P+ T + ++ VC+++
Sbjct: 186 DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 265 GKQVFAFCFKVG------FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSM 318
G+Q+ ++ + FV NS+VS + + R+E++ LFT D +
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVS-----FYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 319 ISSYATHDLGEDALHLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG 377
I+ YA++ A LF L + ++ P + +L + + G +IH+ + +
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 378 FE-SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
+ D + + L+ YA+FG A F+ KD++SWN I+ A + K L+L
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 437 KELIREGMAPDRITLAAVLLAC 458
L+ E + D +T+ ++L C
Sbjct: 421 HHLLNEAITLDSVTILSLLKFC 442
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 15/312 (4%)
Query: 157 VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN- 215
VS + +HG + + G ++ + S++ MY K +D + M +D + WN
Sbjct: 34 VSDLTSGRALHGCVFKLG-HIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNI 92
Query: 216 ---SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
L +C R HF E P T + ++ +C L D GK + ++
Sbjct: 93 VLTGLSVSCGRETMRFFKAMHFAD----EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYI 148
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRL-EDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
K G +++V +A + +++K + D+ F D ++I+ ++ +++ DA
Sbjct: 149 IKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADA 208
Query: 332 LHLFVLTLRENIRPTEYMVSCLL---SSFSIFLPVEVGIQIHA-LVPKLGFESDAVLAST 387
F L L+E P ++ +L +S + G QIH+ +V + ++ + ++
Sbjct: 209 FRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNS 268
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG-MAP 446
LV Y + G I++A +F KDLVSWN ++ G A N + LF L+ +G ++P
Sbjct: 269 LVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP 328
Query: 447 DRITLAAVLLAC 458
D +T+ ++L C
Sbjct: 329 DSVTIISILPVC 340
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 185/448 (41%), Gaps = 83/448 (18%)
Query: 15 LSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFD 74
L C+ L D S K ++ + H++ L+ T +GN + Y+ G + A F
Sbjct: 337 LPVCAQLTD-LASGKEIHSYILRHSYLLE-----DTSVGNALISFYARFGDTSAAYWAFS 390
Query: 75 DISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDA--- 131
+S K+ SWN L S + + +++ + + D+
Sbjct: 391 LMSTKDIISWNAILDAFADSPKQ---------------FQFLNLLHHLLNEAITLDSVTI 435
Query: 132 ---LELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGM--DLSNVVLGNSL 186
L+ + +QG G K+VHG +++G+ D LGN+L
Sbjct: 436 LSLLKFCINVQGIG-------------------KVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 187 IAMYGKVGLVDYSFSVILTM-KKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL-- 243
+ Y K G V+Y+ + L + ++ ++S+NSL+ +G H+ A F +M +L
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTW 536
Query: 244 -----------------------------PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
P+ T L+ VC+ L L +Q + +
Sbjct: 537 SLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR 596
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
G + + + +D+++KC L+ + +F R D + T+M++ YA H G++AL +
Sbjct: 597 -GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMI 655
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL-GFESDAVLASTLVHMYA 393
+ NI+P ++ +L++ ++ G+QI+ + + G + + V + A
Sbjct: 656 YSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIA 715
Query: 394 KFGIIDDALHIFNETKIKDLVS-WNTIM 420
+ G +DDA + ++ + W T++
Sbjct: 716 RGGRLDDAYSFVTQMPVEPNANIWGTLL 743
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 251/534 (47%), Gaps = 74/534 (13%)
Query: 29 KSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICL 88
K ++ K +H K GL+ + N + Y G+ + A ++F D + SW
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD-----AGSW---- 279
Query: 89 KGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSF 148
D+VSWN++I A + AL+LFV M G P+
Sbjct: 280 ----------------------DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQG 317
Query: 149 TF-SIL--TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
T+ S+L +SLV +Q+HG +I++G + + +VLGN+LI Y K G ++ S
Sbjct: 318 TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE-TGIVLGNALIDFYAKCGNLEDSRLCFDY 376
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
++ +I+ WN+L+ + + L+ F +M P ++T ST + C + +
Sbjct: 377 IRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTEL 431
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED-------------------------- 299
+Q+ + ++G+ N V S+ + ++K + D
Sbjct: 432 QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSR 491
Query: 300 ------SVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCL 353
SV+L + ++ DT I++ + D E+ + LF L+ NIRP +Y +
Sbjct: 492 RGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSI 551
Query: 354 LSSFSIFLPVEVGIQIHALVPKLGFE-SDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
LS S + +G IH L+ K F +D + + L+ MY K G I + +F ET+ K+
Sbjct: 552 LSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKN 611
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF 472
L++W ++ L +G L+ FKE + G PDR++ ++L AC +G V EG+ +F
Sbjct: 612 LITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQ 671
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVC 526
M+ ++GV+P +HY V++L++ G LKEA ++ MP+ +WR L C
Sbjct: 672 KMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 177/370 (47%), Gaps = 8/370 (2%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G++ A ++FD MP R+ VS+N++I GY+ G A +F EM+ G P+ T S
Sbjct: 61 KLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSG 120
Query: 153 LTSLVSSPCHA-KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
L S S A Q+HG ++ G+ +++ +G L+ +YG++ L++ + V M +
Sbjct: 121 LLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV---CSNLRDLDKGKQV 268
+WN +M GH + R+ + T S+ + V S ++DLD KQ+
Sbjct: 181 ETWNHMM---SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQL 237
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
K G V ++ I + KC + R+F + WD ++I + A +
Sbjct: 238 HCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENP 297
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
AL LFV P + +L S+ + G QIH ++ K G E+ VL + L
Sbjct: 298 LKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNAL 357
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+ YAK G ++D+ F+ + K++V WN ++ G A N + L LF ++++ G P
Sbjct: 358 IDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTE 416
Query: 449 ITLAAVLLAC 458
T + L +C
Sbjct: 417 YTFSTALKSC 426
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 224/487 (45%), Gaps = 58/487 (11%)
Query: 86 ICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM--QGAGM 143
+CL G L ++ Q+F+ MP + + +WN M+S GF + + F E+ GA +
Sbjct: 156 LCLYGRLDLLEMAE--QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASL 213
Query: 144 RPSSFTFSIL--TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
SSF +L S V +KQ+H + G+D V+ NSLI+ YGK G +
Sbjct: 214 TESSF-LGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV-NSLISAYGKCGNTHMAER 271
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
+ DI+SWN+++ A ++ + AL F M + P+Q T +++ V S ++
Sbjct: 272 MFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQL 331
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC-TSMIS 320
L G+Q+ K G ++ +A ID ++KC LEDS RL + R +C +++S
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLS 390
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES 380
YA D G L LF+ L+ RPTEY S L S + E+ Q+H+++ ++G+E
Sbjct: 391 GYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCV---TELQ-QLHSVIVRMGYED 445
Query: 381 DAVLASTLVHMYAKFGIIDDAL--------------------------------HIFNET 408
+ + S+L+ YAK +++DAL + +
Sbjct: 446 NDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTL 505
Query: 409 KIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGI 468
+ D VSWN + + + ++LFK +++ + PD+ T ++L C+ + G
Sbjct: 506 EQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGS 565
Query: 469 KIF-FSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
I +T+F T+V ++M K G ++ + + E L W ++
Sbjct: 566 SIHGLITKTDFSCAD-----TFVCNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTALI 619
Query: 524 SVCVIHG 530
S IHG
Sbjct: 620 SCLGIHG 626
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 9/308 (2%)
Query: 4 FLKQTQGPYTSLSYC-STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSD 62
FL+ Q + Y ST L C V ++ +H+ +++G Y+ + + Y+
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 63 LGHINDALKVFDDISHKNST-SWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISG 121
+NDAL + D S S NI + GQ + +L + D VSWN I+
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 122 YASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLS 178
+ + + + +ELF M + +RP +TF + SL S C +HG I ++ +
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA 579
Query: 179 NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMR 238
+ + N LI MYGK G + V ++ ++I+W +L+ G+ + AL F +
Sbjct: 580 DTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
PD+ + ++++ C + + +G +F G A+DL ++ L+
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLK 699
Query: 299 DSVRLFTE 306
++ L E
Sbjct: 700 EAEHLIRE 707
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 151/328 (46%), Gaps = 4/328 (1%)
Query: 177 LSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK 236
L V + N++I++Y K+G V + V M + + +S+N+++ + G + A F +
Sbjct: 46 LQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 237 MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG-FVYNSIVSSAAIDLFSKCN 295
MR LP+Q T S L+S C++L D+ G Q+ K G F+ ++ V + + L+ + +
Sbjct: 106 MRYFGYLPNQSTVSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
LE + ++F + M+S ++ + F +R TE +L
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
S +++ Q+H K G + + + ++L+ Y K G A +F + D+VS
Sbjct: 224 GVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
WN I+ A + L LF + G +P++ T +VL + + G +I M
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI-HGML 342
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+ G + G +++ +K G L+++
Sbjct: 343 IKNGCETGIVLGNALIDFYAKCGNLEDS 370
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 238/485 (49%), Gaps = 10/485 (2%)
Query: 154 TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
T L+ + AK +H I + L+N L ++ + + L + L K D ++
Sbjct: 135 TDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVT 194
Query: 214 WNSLM----WAC-----HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
+SL+ WA R G AL + M + + P F+ S + C +L+DL
Sbjct: 195 DSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRV 254
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
G+ + A K + +V + + L+ + +D+ ++F + S+IS +
Sbjct: 255 GRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 314
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
+ +LF E I + ++ +L + S + G +IHA + K + D L
Sbjct: 315 KVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPL 374
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
++L+ MY K G ++ + +F+ KDL SWN ++ A NG + ++LF+ +I G+
Sbjct: 375 LNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
APD IT A+L C+ + G+ +F M+TEF V P EHY +V++L +AG +KEA+
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAV 494
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMG 564
++ETMP+ + +W +L+ C +HG++ V E AKE+ EP P Y++++ Y
Sbjct: 495 KVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAK 554
Query: 565 RWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWE-M 623
W+++ ++R+ M+Q+ K+ GCSW +K+ + F + + D + E +
Sbjct: 555 MWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAI 614
Query: 624 ETEGY 628
E GY
Sbjct: 615 EKSGY 619
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 183/428 (42%), Gaps = 37/428 (8%)
Query: 19 STLLDHCLSQKSVNF-VKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
+ LL C+S KS++ +KI L L ++ + L+S ++ A K+FDD++
Sbjct: 135 TDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVT 194
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
+ + + W +M GY+ NG DAL ++V+
Sbjct: 195 DSSLLTEKV----------------------------WAAMAIGYSRNGSPRDALIVYVD 226
Query: 138 MQGAGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
M + + P +F+ S+ + + +H +I++ + VV N L+ +Y + G
Sbjct: 227 MLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVY-NVLLKLYMESG 285
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
L D + V M + ++++WNSL+ + F KM++ + T +T++
Sbjct: 286 LFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILP 345
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
CS + L GK++ A K + + ++ +D++ KC +E S R+F D A
Sbjct: 346 ACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS 405
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
M++ YA + E+ ++LF + + P LLS S E G+ + +
Sbjct: 406 WNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM- 464
Query: 375 KLGFESDAVLA--STLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNGKVSV 431
K F L + LV + + G I +A+ + K S W +++ +G VSV
Sbjct: 465 KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSV 524
Query: 432 TLDLFKEL 439
KEL
Sbjct: 525 GEIAAKEL 532
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 160/313 (51%), Gaps = 25/313 (7%)
Query: 84 WNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGM 143
+N+ LK ++SG +A ++FDGM R+VV+WNS+IS + + LF +MQ +
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI 333
Query: 144 RPSSFTFSILTSL------VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
F+++ LT++ V++ K++H +I++S + +V L NSL+ MYGK G V+
Sbjct: 334 ---GFSWATLTTILPACSRVAALLTGKEIHAQILKS-KEKPDVPLLNSLMDMYGKCGEVE 389
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCS 257
YS V M D+ SWN ++ G+ E + F M ++ + PD T L+S CS
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 258 NLRDLDKGKQVFAFCFKVGFVYNSIVSSAA--IDLFSKCNRLEDSVRLF-TEQDRWDTAL 314
+ + G +F K F + + A +D+ + +++++V++ T + ++
Sbjct: 450 DTGLTEYGLSLFER-MKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 315 CTSMISSYATH---DLGE-DALHLFVLTLRENIRPTEY-MVSCLLSSFSIFLPVEVGIQI 369
S+++S H +GE A LFVL E P Y MVS + + ++ V+ +I
Sbjct: 509 WGSLLNSCRLHGNVSVGEIAAKELFVL---EPHNPGNYVMVSNIYADAKMWDNVD---KI 562
Query: 370 HALVPKLGFESDA 382
++ + G + +A
Sbjct: 563 REMMKQRGVKKEA 575
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 1 MYTFLKQTQGPYTSLSYCS--TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLD 58
M+ ++ Q S+ + T+L C ++ K +HA LK L N +D
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 59 LYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGM----PVRDVVS 114
+Y G + + +VFD + K+ SWNI L +G + LF+ M D ++
Sbjct: 381 MYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGIT 440
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSG 174
+ +++SG + G + L LF M+ F + +L C
Sbjct: 441 FVALLSGCSDTGLTEYGLSLFERMKTE--------FRVSPALEHYAC------------- 479
Query: 175 MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGH 226
L+ + G+ G + + VI TM K W SL+ +C G+
Sbjct: 480 -----------LVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 196/368 (53%), Gaps = 2/368 (0%)
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
WN++M + R A+ + M + +LPD+++ ++ + D GK++ +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
++GFV + S I L+ K E++ ++F E ++I +A+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 334 LFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV--PKLGFESDAVLASTLVHM 391
+FV R + P ++ + + +S + + Q+H V K +SD ++ ++L+ M
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
Y K G +D A HIF E + +++VSW+++++G A NG L+ F+++ G+ P++IT
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
VL AC +G V+EG F M++EF ++PG HY +V++LS+ G LKEA +VE MP
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVR 571
+ +W ++ C GD+++ E VA ++E EP Y+VLA Y + G W+ + R
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 572 VRKDMEQK 579
VRK M+ K
Sbjct: 445 VRKLMKTK 452
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 125/220 (56%), Gaps = 7/220 (3%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K+G+ NA ++FD P R + SWN++I G G +++A+E+FV+M+ +G+ P FT
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVS 223
Query: 153 LTSL---VSSPCHAKQVHGRIIRSGM-DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+T+ + A Q+H ++++ + S++++ NSLI MYGK G +D + + M++
Sbjct: 224 VTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ 283
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
+++SW+S++ G+ AL F +MR+ + P++ T ++S C + +++GK
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
Query: 269 FAFCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSVRLFTE 306
FA K F +S +DL S+ +L+++ ++ E
Sbjct: 344 FAM-MKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEE 382
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 290 LFSKCNRLEDSVRLFTE------QDRWDTA-LCTSMISSYATHDLGEDALHLFVLTLREN 342
L S C L R+ + D++ A L +++ SY H+ DA+ +++ +R
Sbjct: 53 LLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRST 112
Query: 343 IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDAL 402
+ P Y + ++ + +G ++H++ +LGF D S + +Y K G ++A
Sbjct: 113 VLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENAR 172
Query: 403 HIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
+F+E + L SWN I+ GL + G+ + +++F ++ R G+ PD T+ +V +C
Sbjct: 173 KVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC 228
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 152/339 (44%), Gaps = 12/339 (3%)
Query: 102 QLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL---VS 158
++ D P+ WN+++ Y + DA+++++ M + + P ++ I+ +
Sbjct: 74 RILDQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 159 SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
K++H +R G + + + I +Y K G + + V + + SWN+++
Sbjct: 132 DFTLGKELHSVAVRLGF-VGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAII 190
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV 278
+ AG A+ F M+ + L PD FT ++ + C L DL Q+ +
Sbjct: 191 GGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTE 250
Query: 279 YNS--IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFV 336
S ++ ++ ID++ KC R++ + +F E + + +SMI YA + +AL F
Sbjct: 251 EKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFR 310
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLA--STLVHMYAK 394
+RP + +LS+ VE G A++ K FE + L+ +V + ++
Sbjct: 311 QMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM-KSEFELEPGLSHYGCIVDLLSR 369
Query: 395 FGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVT 432
G + +A + E +K +++ W +M G G V +
Sbjct: 370 DGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 20/150 (13%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G++ A +F+ M R+VVSW+SMI GYA+NG + +ALE F +M+ G+RP+ TF
Sbjct: 267 KCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF-- 324
Query: 153 LTSLVSSPCHAKQVHGRIIRSG-----MDLSNVVLGNSL------IAMYGKVGLVDYSFS 201
V S C VHG ++ G M S L L + + + G + +
Sbjct: 325 --VGVLSAC----VHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 202 VILTMK-KIDIISWNSLMWACHRAGHHELA 230
V+ M K +++ W LM C + G E+A
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 247/508 (48%), Gaps = 13/508 (2%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSS---PCHAKQVH 167
DV SWNS+I+ A +G S++AL F M+ + P+ +F SS KQ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHH 227
+ G S++ + ++LI MY G ++ + V + K +I+SW S++ G+
Sbjct: 100 QQAFVFGYQ-SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 228 ELALAHFYKM------RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
A++ F + D + D +++S CS + + + +F K GF
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 282 IVSSAAIDLFSKCNRLEDSV--RLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTL 339
V + +D ++K +V ++F + D S++S YA + +A +F +
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 340 RENIRP-TEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGII 398
+ + +S +L + S + +G IH V ++G E D ++ ++++ MY K G +
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 399 DDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
+ A F+ K K++ SW ++ G +G + L+LF +I G+ P+ IT +VL AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 459 NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDM 518
++ EG + F +M+ FGV+PG EHY +V++L +AG L++A D+++ M +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 519 WRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQ 578
W +L+ C IH ++++ E + E + Y++L+ Y GRW+ + RVR M+
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 579 KCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ + G S + V+ F +H
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 11/332 (3%)
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
K D+ SWNS++ R+G AL F MR L P + + + CS+L D+ GKQ
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
F G+ + VSSA I ++S C +LED+ ++F E + + TSMI Y +
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 328 GEDALHLFVLTLRENIRPTEYM------VSCLLSSFSIFLPVEVGIQIHALVPKLGFESD 381
DA+ LF L + + M + ++S+ S + IH+ V K GF+
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 382 AVLASTLVHMYAKFGI--IDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
+ +TL+ YAK G + A IF++ KD VS+N+IM A +G + ++F+ L
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 440 IREGMAP-DRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG 498
++ + + ITL+ VLLA ++ + G K G++ T +++M K G
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 499 MLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
++ A + M + W +++ +HG
Sbjct: 337 RVETARKAFDRMKNK-NVRSWTAMIAGYGMHG 367
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 159/340 (46%), Gaps = 15/340 (4%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-------QGAGMRPSS 147
G+L +A ++FD +P R++VSW SMI GY NG + DA+ LF ++ A S
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 148 FTFSILTSLVSSPCHA--KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL--VDYSFSVI 203
S++++ P + +H +I+ G D V +GN+L+ Y K G V + +
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFD-RGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 204 LTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP-DQFTCSTLMSVCSNLRDL 262
+ D +S+NS+M ++G A F ++ +++ + T ST++ S+ L
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 263 DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSY 322
GK + ++G + IV ++ ID++ KC R+E + + F + T+MI+ Y
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 323 ATHDLGEDALHLFVLTLRENIRPTEY-MVSCLLSSFSIFLPVEVGIQIHALVPKLGFESD 381
H AL LF + +RP VS L + L VE +A+ + G E
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 382 AVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
+V + + G + A + K+K D + W++++
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 45/205 (21%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K +H +++GL +G +D+Y G + A K FD + +KN SW
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW---------- 356
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SIL 153
+MI+GY +G ++ ALELF M +G+RP+ TF S+L
Sbjct: 357 ---------------------TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 154 TSLVSSPCHAK------QVHGRI-IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
+ + H + + GR + G++ ++ + G+ G + ++ +I M
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC-----MVDLLGRAGFLQKAYDLIQRM 450
Query: 207 K-KIDIISWNSLMWACHRAGHHELA 230
K K D I W+SL+ AC + ELA
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELA 475
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 308 DRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI 367
D+ D S+I+ A +AL F + ++ PT C + + S + G
Sbjct: 37 DKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGK 96
Query: 368 QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNG 427
Q H G++SD ++S L+ MY+ G ++DA +F+E +++VSW +++ G NG
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 428 KVSVTLDLFKELI------REGMAPDRITLAAVLLACN 459
+ LFK+L+ + M D + L +V+ AC+
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 231/479 (48%), Gaps = 37/479 (7%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH- 222
KQ H +I +G++ N+ + I G + Y++SV + N+++ A
Sbjct: 32 KQSHCYMIITGLNRDNLNVA-KFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSL 90
Query: 223 --RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYN 280
H +A+ + K+ PD FT ++ + + D+ G+Q+ GF +
Sbjct: 91 LDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 281 SIVSSAAIDLFSKCNRLEDSVRLFTEQ-----DRWDTALC-------------------- 315
V + I ++ C L D+ ++F E + W+ L
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210
Query: 316 --------TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI 367
T +IS YA +A+ +F L EN+ P E + +LS+ + +E+G
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 368 QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNG 427
+I + V G L + ++ MYAK G I AL +F +++V+W TI+ GLA +G
Sbjct: 271 RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 428 KVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHY 487
+ L +F +++ G+ P+ +T A+L AC++ +VD G ++F SM +++G+ P EHY
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 488 TYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREP 547
++++L +AG L+EA +++++MP+ +W +L+ +H DL++ E E+++ EP
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEP 450
Query: 548 QAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
Y++LA Y +GRW+ +R M+ K+ G S ++N VY F S L H
Sbjct: 451 NNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTH 509
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 158/310 (50%), Gaps = 11/310 (3%)
Query: 33 FVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLL 92
F + +H + G ++ ++ + +Y G + DA K+FD++ K+ WN L G
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 93 KSGQLGNACQLFDGMP--VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT- 149
K G++ A L + MP VR+ VSW +ISGYA +G +S+A+E+F M + P T
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 150 FSILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
++L++ + S +++ + GM+ + V L N++I MY K G + + V +
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRA-VSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ ++++W +++ GH ALA F +M A + P+ T ++S CS++ +D GK+
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 268 VF-AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISSYATH 325
+F + K G N IDL + +L ++ + + + A+ S++++ H
Sbjct: 373 LFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
Query: 326 ---DLGEDAL 332
+LGE AL
Sbjct: 433 HDLELGERAL 442
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 44/255 (17%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+L C S+ + + ++ G+N L N +D+Y+ G+I AL VF+ ++ +
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 314
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N +W + GL A++G ++AL +F M
Sbjct: 315 NVVTWTTIIAGL-------------------------------ATHGHGAEALAMFNRMV 343
Query: 140 GAGMRPSSFTFSILTSLVSSPCHAKQVH-GRIIRSGMDLS-----NVVLGNSLIAMYGKV 193
AG+RP+ TF +++S+ H V G+ + + M N+ +I + G+
Sbjct: 344 KAGVRPNDVTF---IAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400
Query: 194 GLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
G + + VI +M K + W SL+ A + HH+L L +L P+ L
Sbjct: 401 GKLREADEVIKSMPFKANAAIWGSLLAASNV--HHDLELGERALSELIKLEPNNSGNYML 458
Query: 253 MS-VCSNLRDLDKGK 266
++ + SNL D+ +
Sbjct: 459 LANLYSNLGRWDESR 473
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 226/449 (50%), Gaps = 14/449 (3%)
Query: 69 ALKVFDD--ISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
ALK FDD I N+ + ++ G L A ++FD MP ++ V+W +MI GY G
Sbjct: 108 ALKCFDDQVIYFGNNL-----ISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 127 FSSDALELFVEMQGAGMR-PSSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLSNVVL 182
+A LF + G+R + F L +L S +QVHG +++ G + N+++
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG--VGNLIV 220
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
+SL+ Y + G + + M++ D+ISW +++ AC R GH A+ F M +
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
LP++FT +++ CS + L G+QV + K + V ++ +D+++KC + D +
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
+F +T TS+I+++A GE+A+ LF + R ++ V +L +
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMG 422
+ +G ++HA + K E + + STLV +Y K G DA ++ + +D+VSW ++ G
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 423 LAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKP 482
+ G S LD KE+I+EG+ P+ T ++ L AC + G I S+ +
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALS 519
Query: 483 GEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
+ ++ M +K G + EA + ++MP
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 175/369 (47%), Gaps = 4/369 (1%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-S 151
+ G+L +A + FD M +DV+SW ++IS + G A+ +F+ M P+ FT S
Sbjct: 230 QCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCS 289
Query: 152 ILTSLVSSPC--HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
IL + +QVH +++ M ++V +G SL+ MY K G + V M
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+ ++W S++ A R G E A++ F M+ L+ + T +++ C ++ L GK++
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELH 408
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
A K N + S + L+ KC D+ + + D T+MIS ++
Sbjct: 409 AQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
+AL ++E + P + S L + + + +G IH++ K S+ + S L+
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
HMYAK G + +A +F+ K+LVSW ++MG A NG L L + EG D
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDY 588
Query: 450 TLAAVLLAC 458
A +L C
Sbjct: 589 IFATILSTC 597
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 165/340 (48%), Gaps = 35/340 (10%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
++L C +K++ F + VH+ +K + T ++G +D+Y+ G I+D KVFD +S++
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N+ V+W S+I+ +A GF +A+ LF M+
Sbjct: 349 NT-------------------------------VTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 140 GAGMRPSSFT-FSILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV 196
+ ++ T SIL + V + K++H +II++ ++ NV +G++L+ +Y K G
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIE-KNVYIGSTLVWLYCKCGES 436
Query: 197 DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+F+V+ + D++SW +++ C GH AL +M + P+ FT S+ + C
Sbjct: 437 RDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
+N L G+ + + K + N V SA I +++KC + ++ R+F +
Sbjct: 497 ANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWK 556
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
+MI YA + +AL L E +Y+ + +LS+
Sbjct: 557 AMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 38/258 (14%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
++L C S ++ K +HA +K + Y+G+ + LY G DA V
Sbjct: 390 SILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQ---- 445
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+P RDVVSW +MISG +S G S+AL+ EM
Sbjct: 446 ---------------------------LPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 140 GAGMRPSSFTFSILTSLVSSPCHAKQVHGR----IIRSGMDLSNVVLGNSLIAMYGKVGL 195
G+ P+ FT+S ++L + + GR I + LSNV +G++LI MY K G
Sbjct: 479 QEGVEPNPFTYS--SALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
V +F V +M + +++SW +++ R G AL Y+M D + +T++S
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 256 CSNLRDLDKGKQVFAFCF 273
C ++ +LD+ + A C+
Sbjct: 597 CGDI-ELDEAVESSATCY 613
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 242/501 (48%), Gaps = 18/501 (3%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-S 151
K G+L A QLF + RDVVSW++MI+ Y G +A+ LF +M ++P++ T S
Sbjct: 347 KCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTS 406
Query: 152 ILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
+L V++ K +H I++ ++ S + ++I+MY K G + +
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIE-SELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D +++N+L + G A + M+ + PD T ++ C+ D +G V+
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISSYATHDLG 328
K GF V+ A I++F+KC+ L ++ LF + T M++ Y H
Sbjct: 526 GQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQA 585
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
E+A+ F E +P ++ + + + VG+ +H+ + + GF S + ++L
Sbjct: 586 EEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSL 645
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
V MYAK G+I+ + F E K +VSWNT++ A +G S + LF + + PD
Sbjct: 646 VDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDS 705
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
++ +VL AC + V+EG +IF M ++ EHY +V++L KAG+ EA++++
Sbjct: 706 VSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMR 765
Query: 509 TMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWES 568
M ++ +W +L+ +H +L + ++++ EP P Y + +G +
Sbjct: 766 RMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY----SQDRRLGEVNN 821
Query: 569 LVRVRKDMEQKCTKEFIGCSW 589
+ R++K CSW
Sbjct: 822 VSRIKK---------VPACSW 833
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 228/479 (47%), Gaps = 22/479 (4%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K+ L +A Q+FD M V+DVV+WN+M+SG A NG SS AL LF +M+ + +
Sbjct: 147 KARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYN 206
Query: 153 LTSLVSSPCHA---KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
L VS + + +HG +I+ G + + LI MY + + SV + +
Sbjct: 207 LIPAVSKLEKSDVCRCLHGLVIKKGFIFA---FSSGLIDMYCNCADLYAAESVFEEVWRK 263
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D SW ++M A G E L F MR+ ++ ++ ++ + + + DL KG +
Sbjct: 264 DESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIH 323
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
+ + G + + V+++ + ++SKC LE + +LF + D ++MI+SY +
Sbjct: 324 DYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHD 383
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
+A+ LF +R +I+P ++ +L + +G IH K ES+ A+ ++
Sbjct: 384 EAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVI 443
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
MYAK G AL F IKD V++N + G G + D++K + G+ PD
Sbjct: 444 SMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSR 503
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAID 505
T+ +L C + S G ++ + +K G + +V + M +K L AI
Sbjct: 504 TMVGMLQTCAFCSDYARGSCVYGQI-----IKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 506 IVETMPYTITLDMWRLILSVCVIHGDLQVIETVAK----EIMEREPQA-PFPYLVLAQA 559
+ + + + W ++++ ++HG Q E VA ++ + +P A F +V A A
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHG--QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 200/438 (45%), Gaps = 18/438 (4%)
Query: 88 LKGLLKSGQLGNACQLFDGM--------PVRD--VVSWNSMISGYASNGFSSDALELFVE 137
+ GL QL NA LF VRD VV WNSMI GY G +AL F
Sbjct: 30 VSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGY 89
Query: 138 M-QGAGMRPSSFTFSILTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
M + G+ P ++F+ + K+ +H I G++ S+V +G +L+ MY K
Sbjct: 90 MSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLE-SDVYIGTALVEMYCKA 148
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLM 253
+ + V M D+++WN+++ + G AL F+ MR + D + L+
Sbjct: 149 RDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLI 208
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
S L D + + K GF++ SS ID++ C L + +F E R D +
Sbjct: 209 PAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDES 266
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+M+++YA + E+ L LF L ++R + + L + + + GI IH
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
+ G D +A++L+ MY+K G ++ A +F + +D+VSW+ ++ G+ +
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
LF++++R + P+ +TL +VL C G K + ++ E T V+ M
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCA-GVAASRLGKSIHCYAIKADIESELETATAVISM 445
Query: 494 LSKAGMLKEAIDIVETMP 511
+K G A+ E +P
Sbjct: 446 YAKCGRFSPALKAFERLP 463
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 177/412 (42%), Gaps = 46/412 (11%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+++L C + K +H + +K + + + +Y+ G + ALK F+ +
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
K++ + +N++ GY G ++ A +++ M
Sbjct: 465 KDAVA-------------------------------FNALAQGYTQIGDANKAFDVYKNM 493
Query: 139 QGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+ G+ P S T + + S V+G+II+ G D S + ++LI M+ K
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFD-SECHVAHALINMFTK--- 549
Query: 196 VDYSFSVILTMKKI----DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
D + I+ K +SWN +M G E A+A F +M+ + P+ T
Sbjct: 550 CDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVN 609
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
++ + L L G V + + GF + V ++ +D+++KC +E S + F E
Sbjct: 610 IVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKY 669
Query: 312 TALCTSMISSYATHDLGEDALHLFVLTLREN-IRPTEYMVSCLLSSFSIFLPVEVGIQI- 369
+M+S+YA H L A+ LF L+++EN ++P +LS+ VE G +I
Sbjct: 670 IVSWNTMLSAYAAHGLASCAVSLF-LSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIF 728
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIM 420
+ + E++ + +V + K G+ +A+ + ++K V W ++
Sbjct: 729 EEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
QVHG +I SG+ N LI Y D S + +++ ++ WNS++ RA
Sbjct: 23 QVHGSLIVSGLKPHN-----QLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 225 GHHELALAHF-YKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
G H AL F Y + + PD+++ + + C+ D KG ++ ++G + +
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
+A ++++ K L + ++F + D +M+S A + AL LF +
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
+ L+ + S +V +H LV K GF +S L+ MY + A
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAES 255
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
+F E KD SW T+M A+NG L+LF +L+R
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF-DLMR 292
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/595 (24%), Positives = 275/595 (46%), Gaps = 77/595 (12%)
Query: 14 SLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVF 73
++ +C +LL+ C K++ + +H F+K G++T +Y + L L+ + I+DAL
Sbjct: 4 AIHHCLSLLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGK-LILHCAIS-ISDALPY- 57
Query: 74 DDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALE 133
A +L P D +N+++ GY+ + +++
Sbjct: 58 --------------------------ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVA 91
Query: 134 LFVEMQGAG-MRPSSFTFSILTSLVSSPCHAK---QVHGRIIRSGMDLSNVVLGNSLIAM 189
+FVEM G + P SF+F+ + V + + Q+H + ++ G++ S++ +G +LI M
Sbjct: 92 VFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLE-SHLFVGTTLIGM 150
Query: 190 YGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTC 249
YG G V+++ V M + ++++WN+++ AC R A F KM
Sbjct: 151 YGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKM------------ 198
Query: 250 STLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR 309
V N + + + K LE + R+F+E
Sbjct: 199 ---------------------------LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPH 231
Query: 310 WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
D ++MI A + ++ F R + P E ++ +LS+ S E G +
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD-LVSWNTIMMGLAYNGK 428
H V K G+ + + L+ MY++ G + A +F + K +VSW +++ GLA +G+
Sbjct: 292 HGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ 351
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYT 488
+ LF E+ G+ PD I+ ++L AC++ ++EG F M+ + ++P EHY
Sbjct: 352 GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 411
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQ 548
+V++ ++G L++A D + MP T +WR +L C HG++++ E V + + E +P
Sbjct: 412 CMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPN 471
Query: 549 APFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQ 603
++L+ AY G+W+ + +RK M + K+ S + +Y F + +
Sbjct: 472 NSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGE 526
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 186/359 (51%)
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ 307
T + L+ C ++ KGK++ A F VGF N + + L++ L+ + LF
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 308 DRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI 367
D +MIS Y L ++ L ++ + I P +Y + + + S +E G
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 368 QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNG 427
+ HA++ K +S+ ++ S LV MY K D +F++ +++++W +++ G Y+G
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 428 KVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHY 487
KVS L F+++ EG P+ +T VL ACN+G VD+G + F+SM+ ++G++P +HY
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 488 TYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREP 547
+V+ L +AG L+EA + V P +W +L C IHG+++++E A + +E +P
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP 409
Query: 548 QAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
Y+V A Y G E+ +VR+ ME K+ G S ++ V+ F + H
Sbjct: 410 TNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSH 468
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 3/271 (1%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
K++H ++ G L N L L+ +Y G + + + ++K D+I WN+++
Sbjct: 127 GKRIHAQMFVVGFAL-NEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYV 185
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
+ G + L +Y MR ++PDQ+T +++ CS L L+ GK+ A K N I
Sbjct: 186 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 245
Query: 283 VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLREN 342
V SA +D++ KC+ D R+F + + TS+IS Y H + L F E
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG 305
Query: 343 IRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
RP +L++ + V+ G + +++ G E + + +V + G + +A
Sbjct: 306 CRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
Query: 402 LHIFNETKIKDLVS-WNTIMMGLAYNGKVSV 431
++ K+ W +++ +G V +
Sbjct: 366 YEFVMKSPCKEHPPVWGSLLGACRIHGNVKL 396
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 36/286 (12%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+ LL C +K K +HA +G YL + L LY+
Sbjct: 112 AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA----------------- 154
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
SG L A LF + +RD++ WN+MISGY G + L ++ +M
Sbjct: 155 --------------LSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM 200
Query: 139 QGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+ + P +TF+ + S + H K+ H +I+ + SN+++ ++L+ MY K
Sbjct: 201 RQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIK-SNIIVDSALVDMYFKCSS 259
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
V + ++I+W SL+ G L F KM++ P+ T +++
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Query: 256 CSNLRDLDKG-KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
C++ +DKG + ++ G +A +D + RL+++
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
K + ++FD + R+V++W S+ISGY +G S+ L+ F +M+ G RP+ TF
Sbjct: 255 FKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFL 314
Query: 152 ILTSLVSSPCHAKQVHGRIIRSG--------MDLSNVVLGNSLIAM---YGKVGLVDYSF 200
+ V + C+ HG ++ G D G AM G+ G + ++
Sbjct: 315 V----VLTACN----HGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAY 366
Query: 201 SVILTMK-KIDIISWNSLMWACHRAGH---HELALAHFYKM 237
++ K W SL+ AC G+ ELA F ++
Sbjct: 367 EFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLEL 407
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 231/474 (48%), Gaps = 7/474 (1%)
Query: 100 ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSLVS 158
A +F+ + ++ +N+MI GY+ + A +F +++ G+ F+F + L S
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 159 SPCHA--KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM-KKIDIISWN 215
C + + +HG +RSG + L N+LI Y G + + V M + +D ++++
Sbjct: 138 ELCVSIGEGLHGIALRSGF-MVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFS 196
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
+LM + LAL F MR +E++ + T + +S S+L DL + C K+
Sbjct: 197 TLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKI 256
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
G + + +A I ++ K + + R+F R D MI YA L E+ + L
Sbjct: 257 GLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLL 316
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKF 395
E ++P LLSS + VG + L+ + DA+L + LV MYAK
Sbjct: 317 RQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKV 376
Query: 396 GIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG--MAPDRITLAA 453
G+++ A+ IFN K KD+ SW ++ G +G + LF ++ E + P+ IT
Sbjct: 377 GLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLV 436
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
VL AC++G V EGI+ F M + P EHY VV++L +AG L+EA +++ +P T
Sbjct: 437 VLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPIT 496
Query: 514 ITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
WR +L+ C ++G+ + E+V + E P ++LA + + G E
Sbjct: 497 SDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE 550
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 168/367 (45%), Gaps = 5/367 (1%)
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
++HG ++++G+D + + S + + V + Y+ S+ + ++ +N+++ +
Sbjct: 46 RIHGYMVKTGLDKDDFAV--SKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSIS 103
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
E A + F ++R L D+F+ T + CS + G+ + + GF+ + +
Sbjct: 104 DEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLR 163
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRW-DTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
+A I + C ++ D+ ++F E + D +++++ Y AL LF + + +
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
+ LS+ S + H L K+G + D L + L+ MY K G I A
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
IF+ KD+V+WN ++ A G + + L +++ E M P+ T +L +C Y
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA 343
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
G + +E E + T +V+M +K G+L++A++I M + W ++
Sbjct: 344 AFVGRTVADLLEEE-RIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK-DVKSWTAMI 401
Query: 524 SVCVIHG 530
S HG
Sbjct: 402 SGYGAHG 408
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 40/409 (9%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
T L C + V+ + +H L+ G +T L N + Y G I+DA KVFD+
Sbjct: 130 TTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDE---- 185
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVR-DVVSWNSMISGYASNGFSSDALELFVEM 138
MP D V+++++++GY + AL+LF M
Sbjct: 186 ---------------------------MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIM 218
Query: 139 QGAGMRPSSFTFSILTSLVS---SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+ + + + T S +S A+ H I+ G+DL ++ L +LI MYGK G
Sbjct: 219 RKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL-DLHLITALIGMYGKTGG 277
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
+ + + + D+++WN ++ + G E + +M+ ++ P+ T L+S
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C+ G+ V + ++I+ +A +D+++K LE +V +F D
Sbjct: 338 CAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSW 397
Query: 316 TSMISSYATHDLGEDALHLFVLTLREN--IRPTEYMVSCLLSSFSIFLPVEVGIQ-IHAL 372
T+MIS Y H L +A+ LF EN +RP E +L++ S V GI+ +
Sbjct: 398 TAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRM 457
Query: 373 VPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI-KDLVSWNTIM 420
V F +V + + G +++A + I D +W ++
Sbjct: 458 VEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALL 506
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 31/260 (11%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K+G + +A ++FD +DVV+WN MI YA G + + L +M+ M+P+S TF
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTF-- 331
Query: 153 LTSLVSSPCHAKQVH-GRIIRSGMDLSNV----VLGNSLIAMYGKVGLVDYSFSVILTMK 207
L+SS +++ GR + ++ + +LG +L+ MY KVGL++ + + MK
Sbjct: 332 -VGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRD--AELLPDQFTCSTLMSVCSN------- 258
D+ SW +++ G A+ F KM + ++ P++ T +++ CS+
Sbjct: 391 DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEG 450
Query: 259 LRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF------TEQDRWDT 312
+R + + ++F KV Y +V DL + +LE++ L ++ W
Sbjct: 451 IRCFKRMVEAYSFTPKVEH-YGCVV-----DLLGRAGQLEEAYELIRNLPITSDSTAWRA 504
Query: 313 ALCTSMISSYATHDLGEDAL 332
L + Y DLGE +
Sbjct: 505 LLAACRV--YGNADLGESVM 522
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 2/210 (0%)
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
C L++ + RD + ++ + K G + S + FS + + +F
Sbjct: 28 CQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVS 86
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ 368
+ + +MI Y+ D E A +F + + + L S S L V +G
Sbjct: 87 NTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEG 146
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNG 427
+H + + GF L + L+H Y G I DA +F+E + D V+++T+M G
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVS 206
Query: 428 KVSVTLDLFKELIREGMAPDRITLAAVLLA 457
K ++ LDLF+ + + + + TL + L A
Sbjct: 207 KKALALDLFRIMRKSEVVVNVSTLLSFLSA 236
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 256/519 (49%), Gaps = 11/519 (2%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI-- 152
G++ A ++FD +P R V +NSMI Y+ + L L+ +M ++P S TF++
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 153 ---LTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
L+ LV A V + + G ++V + +S++ +Y K G +D + + M K
Sbjct: 124 KACLSGLVLEKGEA--VWCKAVDFGYK-NDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR 180
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
D+I W +++ +AG A+ + +M++ D+ L+ +L D G+ V
Sbjct: 181 DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC-TSMISSYATHDLG 328
+ ++ G N +V ++ +D+++K +E + R+F+ + TA+ S+IS +A + L
Sbjct: 241 GYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM-MFKTAVSWGSLISGFAQNGLA 299
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
A V +P + +L + S ++ G +H + K D V A+ L
Sbjct: 300 NKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATAL 358
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+ MY+K G + + IF KDLV WNT++ +G + LF ++ + PD
Sbjct: 359 MDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDH 418
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
T A++L A ++ V++G F M ++ ++P E+HY ++++L++AG ++EA+D++
Sbjct: 419 ATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
Query: 509 TMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWES 568
+ L +W +LS C+ H +L V + A +I++ P + +++ + +W+
Sbjct: 479 SEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKE 538
Query: 569 LVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHY 607
+ +VRK M ++ G S + + TF L H+
Sbjct: 539 VAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHH 577
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 173/369 (46%), Gaps = 9/369 (2%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGM-RPSSFTF 150
+K G++ A LF M RDV+ W +M++G+A G S A+E + EMQ G R
Sbjct: 162 MKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVML 221
Query: 151 SILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+L + + + VHG + R+G+ + NVV+ SL+ MY KVG ++ + V M
Sbjct: 222 GLLQASGDLGDTKMGRSVHGYLYRTGLPM-NVVVETSLVDMYAKVGFIEVASRVFSRMMF 280
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
+SW SL+ + G A +M+ PD T ++ CS + L G+ V
Sbjct: 281 KTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLV 340
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
+ K V + + ++A +D++SKC L S +F R D +MIS Y H G
Sbjct: 341 HCYILK-RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNG 399
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLGFESDAVLAST 387
++ + LF+ NI P + LLS+ S VE G ++ K +
Sbjct: 400 QEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC 459
Query: 388 LVHMYAKFGIIDDALHIFNETKIKD-LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
L+ + A+ G +++AL + N K+ + L W ++ G + +SV D+ I + + P
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVG-DIAANKILQ-LNP 517
Query: 447 DRITLAAVL 455
D I + ++
Sbjct: 518 DSIGIQTLV 526
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 209/466 (44%), Gaps = 28/466 (6%)
Query: 145 PSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
P F L S+ H Q+H +I +G L+ + LIA G++G + Y+ V
Sbjct: 17 PKRIKF--LQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFD 74
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
+ + + +NS++ R + + L + +M ++ PD T + + C + L+K
Sbjct: 75 ELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEK 134
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
G+ V+ G+ + V S+ ++L+ KC +++++ LF + + D T+M++ +A
Sbjct: 135 GEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQ 194
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
A+ + E ++ LL + ++G +H + + G + V+
Sbjct: 195 AGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVV 254
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
++LV MYAK G I+ A +F+ K VSW +++ G A NG + + E+ G
Sbjct: 255 ETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGF 314
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
PD +TL VL+AC+ + G + + + T +++M SK G L +
Sbjct: 315 QPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD--RVTATALMDMYSKCGALSSSR 372
Query: 505 DIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMER--EP-QAPFPYLVLAQAYQ 561
+I E + L W ++S IHG+ Q + ++ ++ E EP A F L+ A ++
Sbjct: 373 EIFEHVGRK-DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHS 431
Query: 562 MMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHY 607
+ +EQ G WF + + Y Q ++ +HY
Sbjct: 432 GL------------VEQ-------GQHWFSVMINKYKIQPSE-KHY 457
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 236/499 (47%), Gaps = 33/499 (6%)
Query: 164 KQVHGRIIRSGMDLSNVVLGN--SLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
KQ+H R++++G+ + + S + Y+ V + D WN ++
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF---V 278
+ E +L + +M + + +T +L+ CSNL ++ Q+ A K+G+ V
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 279 Y--NSIVSSAAID--------LFSKCNRLEDS-----VRLFTEQDRWDTALC-------- 315
Y NS+++S A+ LF + +D ++ + + + D AL
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 316 -----TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
T+MIS Y D+ ++AL LF ++ P ++ LS+ + +E G IH
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVS 430
+ + K D+VL L+ MYAK G +++AL +F K K + +W ++ G AY+G
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 330
Query: 431 VTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV 490
+ F E+ + G+ P+ IT AVL AC+Y V+EG IF+SME ++ +KP EHY +
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Query: 491 VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP 550
V++L +AG+L EA ++ MP +W +L C IH ++++ E + + ++ +P
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450
Query: 551 FPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGK 610
Y+ A + M +W+ R+ M+++ + GCS ++ + F + H +
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 510
Query: 611 DXXXXXXXXVWEMETEGYV 629
++E GYV
Sbjct: 511 KIQSKWRIMRRKLEENGYV 529
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 152/312 (48%), Gaps = 10/312 (3%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
+Y + + P+ + ++ S LL C + + +HA KLG Y N ++ Y
Sbjct: 102 LYQRMLCSSAPHNAYTFPS-LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSY 160
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
+ G+ A +FD I + SWN +KG +K+G++ A LF M ++ +SW +MIS
Sbjct: 161 AVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMIS 220
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNV 180
GY + +AL+LF EMQ + + P + + + S + +Q G+ I S ++ + +
Sbjct: 221 GYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ--GKWIHSYLNKTRI 278
Query: 181 ----VLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK 236
VLG LI MY K G ++ + V +KK + +W +L+ GH A++ F +
Sbjct: 279 RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFME 338
Query: 237 MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS--SAAIDLFSKC 294
M+ + P+ T + +++ CS +++GK +F + + + + +DL +
Sbjct: 339 MQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRA 397
Query: 295 NRLEDSVRLFTE 306
L+++ R E
Sbjct: 398 GLLDEAKRFIQE 409
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 163/358 (45%), Gaps = 45/358 (12%)
Query: 103 LFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSS 159
+FDG D WN MI G++ + +L L+ M + +++TF L S +S+
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 160 PCHAKQVHGRIIRSGMD----------LSNVVLG--------------------NSLIAM 189
Q+H +I + G + S V G NS+I
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 190 YGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTC 249
Y K G +D + ++ M + + ISW +++ +A ++ AL F++M+++++ PD +
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 250 STLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR 309
+ +S C+ L L++GK + ++ K +S++ ID+++KC +E+++ +F +
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 310 WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
T++IS YA H G +A+ F+ + I+P + +L++ S VE G I
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 370 HALVPKLGFESDAVLASTLVH------MYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
E D L T+ H + + G++D+A E +K + V W ++
Sbjct: 371 F-----YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 230/454 (50%), Gaps = 44/454 (9%)
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
L+ + V + ++D+IS +++ + H A F ++ + P++FT T++
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
+ RD+ GKQ+ + K+G N V SA ++ + K + L D+ R F + +
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 315 CTSMISSY-ATHDL------------------------------GEDALHLFVLTLRENI 343
T++IS Y H+ E+A++ FV LRE +
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 344 R-PTEYMVSCLLSSFSIFLPVEVGIQIHALVPK-LGFESDAVLASTLVHMYAKFGIIDDA 401
P E C +++ S G IHA K LG + + ++L+ Y+K G ++D+
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 402 LHIFN--ETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE-GMAPDRITLAAVLLAC 458
L FN E + +++VSWN+++ G A+NG+ + +F++++++ + P+ +T+ VL AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 459 NYGSFVDEGIKIFFSMETEFGVKPGE---EHYTYVVEMLSKAGMLKEAIDIVETMPYTIT 515
N+ + EG F ++ P EHY +V+MLS++G KEA +++++MP
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 516 LDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKD 575
+ W+ +L C IH + ++ + A +I+E +P+ Y++L+ AY M W+++ +R+
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 576 MEQKCTKEFIGCSWFGMKNHVYTF----QSNQLQ 605
M++ K F GCSW +++ + F ++N+L+
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRVFVNADKNNELK 494
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
T++ + + V K +H + LK+GL + ++G+ L+ Y L + DA + FDD
Sbjct: 98 TVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDP 157
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N S + G LK + A LF MP R VV+WN++I G++ G + +A+ FV+M
Sbjct: 158 NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 140 GAGMR-PSSFTFSILTSLVS---SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
G+ P+ TF + +S S K +H I+ NV + NSLI+ Y K G
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 196 VDYSFSVI--LTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTL 252
++ S L ++ +I+SWNS++W G E A+A F KM +D L P+ T +
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGV 337
Query: 253 MSVCSNLRDLDKGKQVF 269
+ C++ + +G F
Sbjct: 338 LFACNHAGLIQEGYMYF 354
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 141/298 (47%), Gaps = 40/298 (13%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
+ S + NA ++FD +P DV+S ++I + +A + F + G+RP+ FTF
Sbjct: 38 IDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFG 97
Query: 152 --ILTSLVSSPCH-AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLV------------ 196
I +S S KQ+H ++ G+ SNV +G++++ Y K+ +
Sbjct: 98 TVIGSSTTSRDVKLGKQLHCYALKMGL-ASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 197 -------------------DYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM 237
+ + S+ M + +++WN+++ + G +E A+ F M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 238 -RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK-VGFVYNSIVSSAAIDLFSKCN 295
R+ ++P++ T ++ SN+ GK + A K +G +N V ++ I +SKC
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 296 RLEDSVRLFT--EQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE-NIRPTEYMV 350
+EDS+ F E+++ + SMI YA + GE+A+ +F +++ N+RP +
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTI 334
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 241/487 (49%), Gaps = 13/487 (2%)
Query: 102 QLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSS----FTFSILTSLV 157
++FD M RD VS+ S+I+ +G +A++L EM G P S ++ T +
Sbjct: 103 KVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMG 162
Query: 158 SSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSL 217
SS A+ H ++ +V+L +L+ MY K +F V M+ + +SW ++
Sbjct: 163 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 218 MWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG----KQVFAFCF 273
+ C ++E+ + F M+ L P++ T L+SV +L+ G K++ F F
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVT---LLSVLPACVELNYGSSLVKEIHGFSF 279
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
+ G + +++A + ++ +C + S LF D + +SMIS YA + ++
Sbjct: 280 RHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMN 339
Query: 334 LFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYA 393
L +E I + ++S+ + + +H+ + K GF S +L + L+ MYA
Sbjct: 340 LLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYA 399
Query: 394 KFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
K G + A +F E KDLVSW++++ +G S L++FK +I+ G D + A
Sbjct: 400 KCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLA 459
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
+L ACN+ V+E I F+ ++ + EHY + +L + G + +A ++ MP
Sbjct: 460 ILSACNHAGLVEEAQTI-FTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMK 518
Query: 514 ITLDMWRLILSVCVIHGDLQVI-ETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRV 572
+ +W +LS C HG L V + +A E+M+ EP P Y++L++ + G + + V
Sbjct: 519 PSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEV 578
Query: 573 RKDMEQK 579
R+ M+++
Sbjct: 579 RRVMQRR 585
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 6/346 (1%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT-F 150
LK A +FD M V++ VSW +MISG +N ++LF MQ +RP+ T
Sbjct: 196 LKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLL 255
Query: 151 SILTSLVS---SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
S+L + V K++HG R G ++ L + + MY + G V S + T K
Sbjct: 256 SVLPACVELNYGSSLVKEIHGFSFRHGCH-ADERLTAAFMTMYCRCGNVSLSRVLFETSK 314
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D++ W+S++ G + +MR + + T ++S C+N L
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
V + K GF+ + ++ +A ID+++KC L + +F E D +SMI++Y H
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGH 434
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
G +AL +F ++ + +LS+ + VE I K +
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYAC 494
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNGKVSVT 432
+++ +FG IDDA + +K W++++ +G++ V
Sbjct: 495 YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 169/350 (48%), Gaps = 13/350 (3%)
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAK-------QVHGRII 171
+ G S+ F +AL L+ +++ + + FT +IL S++ + + Q+H +
Sbjct: 17 LKGLVSDQFYDEALRLY-KLKIHSLGTNGFT-AILPSVIKACAFQQEPFLLGAQLHCLCL 74
Query: 172 RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELAL 231
++G D VV NSLI+MY K V M D +S+ S++ +C + G A+
Sbjct: 75 KAGADCDTVV-SNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 232 AHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG--FVYNSIVSSAAID 289
+M +P ++L+++C+ + K ++F V + ++S+A +D
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 290 LFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEY- 348
++ K + + +F + + + T+MIS + E + LF REN+RP
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 349 MVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNET 408
++S L + + + +IH + G +D L + + MY + G + + +F +
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETS 313
Query: 409 KIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
K++D+V W++++ G A G S ++L ++ +EG+ + +TL A++ AC
Sbjct: 314 KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSAC 363
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
G Q+ C K G +++VS++ I +++K +R ++F E DT S+I+S
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLS-SFSIFLPVEVGIQIHALVPKLGFESDAV 383
L +A+ L P +V+ LL+ + +V HALV ++V
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 384 LAST-LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
L ST LV MY KF A H+F++ ++K+ VSW ++ G N + +DLF+ + RE
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 443 GMAPDRITLAAVLLAC---NYGSFVDEGIKIF 471
+ P+R+TL +VL AC NYGS + + I F
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGF 277
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
++ C + ++F VH+ LK G ++ LGN +D+Y+ G ++ A +VF +++ K
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
+ SW +SMI+ Y +G S+ALE+F M
Sbjct: 418 DLVSW-------------------------------SSMINAYGLHGHGSEALEIFKGMI 446
Query: 140 GAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGN--SLIAMYGKVGLVD 197
G F + S + ++ ++G V L + I + G+ G +D
Sbjct: 447 KGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKID 506
Query: 198 YSFSVILTMK-KIDIISWNSLMWACHRAGHHELA 230
+F V + M K W+SL+ AC G ++A
Sbjct: 507 DAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 261/523 (49%), Gaps = 44/523 (8%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G + A +FD M +DVV+WN +ISGY G DA+ + M+ ++ T +
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 153 LTSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
L S + + K+V IR + S++VL ++++ MY K G + + V + +
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFE-SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD--LDKGKQ 267
D+I WN+L+ A +G AL FY M+ + P+ T + + + S LR+ +D+ K
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI--ILSLLRNGQVDEAKD 497
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+F G + N I W T+M++ +
Sbjct: 498 MFLQMQSSGIIPNLI--------------------------SW-----TTMMNGMVQNGC 526
Query: 328 GEDALHLFVLTLREN-IRPTEYMVSCLLSSFSIFLPVEVGIQIHA-LVPKLGFESDAVLA 385
E+A+ LF+ ++E+ +RP + ++ LS+ + + +G IH ++ L S +
Sbjct: 527 SEEAI-LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIE 585
Query: 386 STLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
++LV MYAK G I+ A +F +L N ++ A G + + L++ L G+
Sbjct: 586 TSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLK 645
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID 505
PD IT+ VL ACN+ +++ I+IF + ++ +KP EHY +V++L+ AG ++A+
Sbjct: 646 PDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALR 705
Query: 506 IVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGR 565
++E MP+ M + +++ C ++++ ++++++E EP+ Y+ ++ AY + G
Sbjct: 706 LIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGS 765
Query: 566 WESLVRVRKDMEQKCTKEFIGCSWFGMKNH--VYTFQSNQLQH 606
W+ +V++R+ M+ K K+ GCSW + V+ F +N H
Sbjct: 766 WDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTH 808
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 235/497 (47%), Gaps = 42/497 (8%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C+ ++ ++ K +HA LK G D Y+ +I L +F
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNG------------DFYARNEYIETKLVIF------- 116
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
K L A LF + VR+V SW ++I G AL FVEM
Sbjct: 117 ----------YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 141 AGMRPSSFTFSILTSLVSSPCHA-------KQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
+ P +F + V C A + VHG +++SG++ V + +SL MYGK
Sbjct: 167 NEIFPDNF----VVPNVCKACGALKWSRFGRGVHGYVVKSGLE-DCVFVASSLADMYGKC 221
Query: 194 GLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLM 253
G++D + V + + ++WN+LM + G +E A+ F MR + P + T ST +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
S +N+ +++GKQ A G ++I+ ++ ++ + K +E + +F D
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+IS Y L EDA+++ L E ++ ++ L+S+ + +++G ++
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
+ FESD VLAST++ MYAK G I DA +F+ T KDL+ WNT++ A +G L
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
LF + EG+ P+ IT ++L+ VDE +F M++ G+ P +T ++
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNG 520
Query: 494 LSKAGMLKEAIDIVETM 510
+ + G +EAI + M
Sbjct: 521 MVQNGCSEEAILFLRKM 537
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 155/357 (43%), Gaps = 64/357 (17%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+TL+ +++ K V + ++ + L + +D+Y+ G I DA KVFD
Sbjct: 379 ATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE 438
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDV-------------------------- 112
K+ WN L +SG G A +LF GM + V
Sbjct: 439 KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDM 498
Query: 113 -------------VSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS- 158
+SW +M++G NG S +A+ +MQ +G+RP++F+ ++ S +
Sbjct: 499 FLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH 558
Query: 159 -SPCH-AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNS 216
+ H + +HG IIR+ S V + SL+ MY K G ++ + V + ++ N+
Sbjct: 559 LASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNA 618
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
++ A G+ + A+A + + L PD T + ++S C++ D+++ ++F
Sbjct: 619 MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT------ 672
Query: 277 FVYNSIVSSAA-----------IDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISS 321
IVS + +DL + E ++RL E + D + S+++S
Sbjct: 673 ----DIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVAS 725
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 198/453 (43%), Gaps = 53/453 (11%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
+ QG + ST L + V K HA + G+ LG L+ Y +G I
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNA---CQLFDGMPVR-DVVSWNSMISGY 122
A VFD + K+ +WN+ + G ++ G + +A CQL ++ D V+ +++S
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 123 ASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLV-------SSPCHAKQVHGRIIRSGM 175
A ++ L+L E+Q +R S + +L S V S AK+V + +
Sbjct: 386 A----RTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Query: 176 DLSNVVL---------GNSLIAMYG---------------------KVGLVDYSFSVILT 205
L N +L G +L YG + G VD + + L
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 206 MKK----IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
M+ ++ISW ++M + G E A+ KM+++ L P+ F+ + +S C++L
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 262 LDKGKQVFAFCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI 319
L G+ + + + ++S+VS ++ +D+++KC + + ++F + + L +MI
Sbjct: 562 LHIGRTIHGYIIR-NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMI 620
Query: 320 SSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA-LVPKLGF 378
S+YA + ++A+ L+ ++P ++ +LS+ + + I+I +V K
Sbjct: 621 SAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSM 680
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIK 411
+ +V + A G + AL + E K
Sbjct: 681 KPCLEHYGLMVDLLASAGETEKALRLIEEMPFK 713
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 238/492 (48%), Gaps = 33/492 (6%)
Query: 142 GMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
G+R F V S K+++ II G+ S+ ++ ++ K+ +DY+
Sbjct: 5 GIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMV-TKMVDFCDKIEDMDYATR 63
Query: 202 VILTMKKIDIISWNSLMWA-CHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLR 260
+ + ++ +NS++ A H + + ++ + +R + LPD+FT + C++L
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 261 DLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS 320
GKQV K G ++ + +A ID++ K + L D+ ++F E D S++S
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVS------CLLSSFSIF-------------- 360
YA + A LF L L + I M+S C + + F
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 361 ----LP-------VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
LP +E+G IH + GF + + L+ MY+K G+I A+ +F + +
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIK 469
KD++SW+T++ G AY+G ++ F E+ R + P+ IT +L AC++ EG++
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 470 IFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIH 529
F M ++ ++P EHY ++++L++AG L+ A++I +TMP +W +LS C
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTP 423
Query: 530 GDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
G+L V ++E EP+ Y++LA Y +G+WE + R+RK + + K+ G S
Sbjct: 424 GNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSL 483
Query: 590 FGMKNHVYTFQS 601
+ N V F S
Sbjct: 484 IEVNNIVQEFVS 495
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 6/309 (1%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+ C S S K VH H K G + N +D+Y + DA KVFD++ ++
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
SWN L G + GQ+ A LF M + +VSW +MISGY G +A++ F EMQ
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 141 AGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
AG+ P + S+L S + S K +H R G L + N+LI MY K G++
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVIS 293
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCS 257
+ + M+ D+ISW++++ G+ A+ F +M+ A++ P+ T L+S CS
Sbjct: 294 QAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 258 NLRDLDKGKQVFAFCFKVGFVYNSIVSSAA-IDLFSKCNRLEDSVRLF-TEQDRWDTALC 315
++ +G + F + + I ID+ ++ +LE +V + T + D+ +
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413
Query: 316 TSMISSYAT 324
S++SS T
Sbjct: 414 GSLLSSCRT 422
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 167/386 (43%), Gaps = 41/386 (10%)
Query: 100 ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR-PSSFTFSILTSLVS 158
A +LF+ + +V +NS+I Y N D + ++ ++ P FTF + +
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 159 S--PCH-AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN 215
S C+ KQVHG + + G +VV N+LI MY K + + V M + D+ISWN
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRF-HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWN 179
Query: 216 SLMWACHRAGHHELALAHFYKMRD-------------------------------AELLP 244
SL+ R G + A F+ M D A + P
Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
D+ + +++ C+ L L+ GK + + + GF+ + V +A I+++SKC + +++LF
Sbjct: 240 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 305 TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
+ + D ++MIS YA H A+ F R ++P LLS+ S +
Sbjct: 300 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 365 VGIQIHALVPK-LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMG 422
G++ ++ + E L+ + A+ G ++ A+ I +K D W +++
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
Query: 423 LAYNGKVSVTL---DLFKELIREGMA 445
G + V L D EL E M
Sbjct: 420 CRTPGNLDVALVAMDHLVELEPEDMG 445
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 186/358 (51%), Gaps = 2/358 (0%)
Query: 245 DQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
D + S+ + C RD G K GF+ + + S+ + L+ +E++ ++F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 305 TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
E + T+MIS +A + L L+ + P +Y + LLS+ + +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA 424
G +H +G +S ++++L+ MY K G + DA IF++ KD+VSWN+++ G A
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 425 YNGKVSVTLDLFKELI-REGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPG 483
+G ++LF+ ++ + G PD IT VL +C + V EG K FF++ E G+KP
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK-FFNLMAEHGLKPE 357
Query: 484 EEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIM 543
HY+ +V++L + G+L+EA++++E MP +W +L C +HGD+ A+E +
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Query: 544 EREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQS 601
EP ++ LA Y +G W+ VRK M+ K K GCSW + N+V+ F++
Sbjct: 418 MLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKA 475
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 164/349 (46%), Gaps = 15/349 (4%)
Query: 125 NGFSSDALELFVEMQGAGMRPSSFTFSI--LTSLVSSPCHAKQ-------VHGRIIRSGM 175
NG SS E+ +E + ++ ++F L+S V S C + H ++ G
Sbjct: 93 NGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRS-CGLNRDFRTGSGFHCLALKGGF 151
Query: 176 DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFY 235
+S+V LG+SL+ +Y G V+ ++ V M + +++SW +++ + ++ L +
Sbjct: 152 -ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYS 210
Query: 236 KMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
KMR + P+ +T + L+S C+ L +G+ V +G +S++ I ++ KC
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTL-RENIRPTEYMVSCLL 354
L+D+ R+F + D SMI+ YA H L A+ LF L + + +P +L
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 355 SSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DL 413
SS V+ G + L+ + G + + S LV + +FG++ +AL + +K +
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKE--LIREGMAPDRITLAAVLLACNY 460
V W +++ +G V + +E ++ A + LA + + Y
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGY 439
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
SG++ NA ++F+ MP R+VVSW +MISG+A L+L+ +M+ + P+ +TF+ L
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 154 TSLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
S + + VH + + G+ S + + NSLI+MY K G + +F + D
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLK-SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD 286
Query: 211 IISWNSLMWACHRAGHHELALAHF-YKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
++SWNS++ + G A+ F M + PD T ++S C + + +G++ F
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
+ G S +DL + L++++ L
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALEL 380
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 54/238 (22%)
Query: 1 MYTFLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
+Y+ ++++ ++ + LL C ++ + VH L +GL +Y ++ N + +Y
Sbjct: 208 LYSKMRKSTSDPNDYTF-TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMY 266
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
G + DA ++FD S+K+ SW NSMI+
Sbjct: 267 CKCGDLKDAFRIFDQFSNKDVVSW-------------------------------NSMIA 295
Query: 121 GYASNGFSSDALELF-VEMQGAGMRPSSFTF-SILTSLVSSPCHAKQVHGRIIRSGMDLS 178
GYA +G + A+ELF + M +G +P + T+ +L+S C H +++ G
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS-----CR----HAGLVKEGRKFF 346
Query: 179 NVVLGNS----------LIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAG 225
N++ + L+ + G+ GL+ + +I M K + + W SL+++C G
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 210/418 (50%), Gaps = 10/418 (2%)
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID--IISWNSLMW 219
H +VH +I + +N+ + + L+ +Y G + + V M K D +WNSL+
Sbjct: 110 HGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLIS 168
Query: 220 ACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY 279
G +E A+A +++M + + PD+FT ++ C + + G+ + K GF Y
Sbjct: 169 GYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY 228
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTL 339
+ V +A + +++KC + + +F D SM++ Y H L +AL +F L +
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
+ I P + +S +L+ L + G Q+H V + G E + +A+ L+ +Y+K G +
Sbjct: 289 QNGIEPDKVAISSVLAR---VLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLG 345
Query: 400 DALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACN 459
A IF++ +D VSWN I ++ + K S L F+++ R PD IT +VL C
Sbjct: 346 QACFIFDQMLERDTVSWNAI---ISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCA 402
Query: 460 YGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID-IVETMPYTITLDM 518
V++G ++F M E+G+ P EHY +V + +AGM++EA IV+ M +
Sbjct: 403 NTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTV 462
Query: 519 WRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDM 576
W +L C +HG+ + E A+ + E EP + +L + Y R E + RVR+ M
Sbjct: 463 WGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 15/287 (5%)
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
P+ F ++L+ C +LR +D G +V N +SS + L++ C E + +
Sbjct: 92 PEIF--ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEV 149
Query: 304 FTEQDRWDTA--LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
F + D++ S+IS YA EDA+ L+ + ++P + +L +
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG 209
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMM 421
V++G IH + K GF D + + LV MYAK G I A ++F+ KD VSWN+++
Sbjct: 210 SVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLT 269
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL---LACNYGSFVDEGIKIFFSMETEF 478
G ++G + LD+F+ +++ G+ PD++ +++VL L+ +G + G I ME E
Sbjct: 270 GYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQL-HGWVIRRGMEWEL 328
Query: 479 GVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSV 525
V ++ + SK G L +A I + M T+ W I+S
Sbjct: 329 SVA------NALIVLYSKRGQLGQACFIFDQMLERDTVS-WNAIISA 368
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G + A +FD +P +D VSWNSM++GY +G +AL++F M G+ P S
Sbjct: 242 KCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISS 301
Query: 153 LTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
+ + V S H +Q+HG +IR GM+ + + N+LI +Y K G + + + M + D +
Sbjct: 302 VLARVLSFKHGRQLHGWVIRRGMEWE-LSVANALIVLYSKRGQLGQACFIFDQMLERDTV 360
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
SWN+++ A + + L +F +M A PD T +++S+C+N ++ G+++F+
Sbjct: 361 SWNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
Query: 273 FKVGFVYNSIVSSAA-IDLFSKCNRLEDSVRLFTEQ 307
K + + A ++L+ + +E++ + ++
Sbjct: 418 SKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQE 453
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 173/387 (44%), Gaps = 40/387 (10%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
++LL+ C S ++++ VH L + ++ + LY+ G+ A +VFD +S
Sbjct: 96 ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK 155
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
++S+ + +WNS+ISGYA G DA+ L+ +M
Sbjct: 156 RDSSPF-----------------------------AWNSLISGYAELGQYEDAMALYFQM 186
Query: 139 QGAGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
G++P FTF + + S + +H +++ G VL N+L+ MY K G
Sbjct: 187 AEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVL-NALVVMYAKCGD 245
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
+ + +V + D +SWNS++ G AL F M + PD+ S SV
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS---SV 302
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
+ + G+Q+ + + G + V++A I L+SK +L + +F + DT
Sbjct: 303 LARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSW 362
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
++IS+ H + L F R N +P +LS + VE G ++ +L+ K
Sbjct: 363 NAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 376 -LGFESDAVLASTLVHMYAKFGIIDDA 401
G + + +V++Y + G++++A
Sbjct: 420 EYGIDPKMEHYACMVNLYGRAGMMEEA 446
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 233/520 (44%), Gaps = 39/520 (7%)
Query: 145 PSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSN--VVLGNSLIAMYGKVGLVDYSFSV 202
P ++L S Q+H I+R + L VL L Y G + +S ++
Sbjct: 27 PPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLAL 86
Query: 203 ILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDL 262
D+ + + + G + A + ++ +E+ P++FT S+L+ CS
Sbjct: 87 FHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST---- 142
Query: 263 DKGKQVFAFCFKVGF------------VY------------------NSIVSSAA-IDLF 291
GK + K G VY S+VSS A I +
Sbjct: 143 KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 202
Query: 292 SKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE-NIRPTEYMV 350
+K +E + LF D MI YA H DAL LF L E +P E V
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 351 SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI 410
LS+ S +E G IH V + + + L+ MY+K G +++A+ +FN+T
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 411 KDLVSWNTIMMGLAYNGKVSVTLDLFKELIR-EGMAPDRITLAAVLLACNYGSFVDEGIK 469
KD+V+WN ++ G A +G L LF E+ G+ P IT L AC + V+EGI+
Sbjct: 323 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
Query: 470 IFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIH 529
IF SM E+G+KP EHY +V +L +AG LK A + ++ M +W +L C +H
Sbjct: 383 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 442
Query: 530 GDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
GD + + +A+ ++ + Y++L+ Y +G +E + +VR M++K + G S
Sbjct: 443 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 502
Query: 590 FGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
++N V+ F++ +H K+ +++ GYV
Sbjct: 503 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 542
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S+LL C ++ K++H H LK GL Y+ +D+Y+ G + A KVFD +
Sbjct: 134 SSLLKSCSTKSG----KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
++ S + K G + A LFD M RD+VSWN MI GYA +GF +DAL LF ++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGR----IIRSGMDLSNVVLGNSLIAMYGKVG 194
G +P +++ +L + GR ++S NV + LI MY K G
Sbjct: 250 LAEG-KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 195 LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRD-AELLPDQFTCSTLM 253
++ + V + DI++WN+++ G+ + AL F +M+ L P T +
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 254 SVCSNLRDLDKGKQVF 269
C++ +++G ++F
Sbjct: 369 QACAHAGLVNEGIRIF 384
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 241/489 (49%), Gaps = 13/489 (2%)
Query: 152 ILTSLVSS--PCHAKQVHGRIIRSGMDLSNVVLGN--SLIAMYGKVGLVDYSFSVILTMK 207
+L+ +VSS H +Q+H ++R+ + ++ V + S +A+ ++YS V
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLP-DQFTCSTLMSVCSNLRDLDKGK 266
+ N+++ A + F +R LP + + S + C DL G
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
Q+ F GF+ +S++ + +DL+S C D+ ++F E + DT + S Y +
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 327 LGEDALHLFVLTLRE---NIRPTEYMVSCLLS--SFSIFLPVEVGIQIHALVPKLGFESD 381
D L LF + ++P V+CLL+ + + ++ G Q+H + + G
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDG--VTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 382 AVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
L++TLV MY++ G +D A +F + +++VSW ++ GLA NG ++ F E+++
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 442 EGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMET-EFGVKPGEEHYTYVVEMLSKAGML 500
G++P+ TL +L AC++ V EG+ F M + EF +KP HY VV++L +A +L
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 501 KEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAY 560
+A ++++M +WR +L C +HGD+++ E V ++E + + Y++L Y
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 561 QMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXV 620
+G+WE + +R M++K GCS ++ V+ F + + H ++
Sbjct: 432 STVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEIN 491
Query: 621 WEMETEGYV 629
+++ GYV
Sbjct: 492 QQLKIAGYV 500
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 163/364 (44%), Gaps = 27/364 (7%)
Query: 99 NACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG---AGMRPSSFTFSILTS 155
+AC++FD +P RD VSWN + S Y N + D L LF +M+ ++P T +
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 156 LVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
++ KQVH I +G+ + L N+L++MY + G +D ++ V M++ +++
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLS-GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVV 284
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF--- 269
SW +L+ G + A+ F +M + P++ T + L+S CS+ + +G F
Sbjct: 285 SWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
Query: 270 ---AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISSYATH 325
F K + V +DL + L+ + L + + D+ + +++ + H
Sbjct: 345 RSGEFKIKPNLHHYGCV----VDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVH 400
Query: 326 ---DLGEDAL-HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESD 381
+LGE + HL L E +Y++ LL+++S E ++ +L+ + +
Sbjct: 401 GDVELGERVISHLIELKAEE---AGDYVL--LLNTYSTVGKWEKVTELRSLMKEKRIHTK 455
Query: 382 AVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
++ + I+DD H E K L N + Y +++ L +
Sbjct: 456 PGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEE 515
Query: 442 EGMA 445
+G A
Sbjct: 516 KGYA 519
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 50/267 (18%)
Query: 18 CSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
C L C + +++F K VH + GL+ L N + +YS
Sbjct: 220 CLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYS---------------- 263
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
+ G + A Q+F GM R+VVSW ++ISG A NGF +A+E F E
Sbjct: 264 ---------------RCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 138 MQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRI-----IRSG--MDLSNVVLGNSLIAMY 190
M G+ P T LT L+S+ H+ V + +RSG N+ ++ +
Sbjct: 309 MLKFGISPEEQT---LTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL 365
Query: 191 GKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELA---LAHFYKMRDAE----- 241
G+ L+D ++S+I +M+ K D W +L+ AC G EL ++H +++ E
Sbjct: 366 GRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYV 425
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQV 268
LL + ++ + LR L K K++
Sbjct: 426 LLLNTYSTVGKWEKVTELRSLMKEKRI 452
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/618 (24%), Positives = 278/618 (44%), Gaps = 81/618 (13%)
Query: 2 YTFLKQTQGPYTSLSYCS-TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
++ L+ G + + Y S +LL C+ + +HAH + GL + L + + Y
Sbjct: 69 FSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY 128
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
S +++A + ++ ++ +P WN +I
Sbjct: 129 SAFNLLDEAQTITEN-------------------------SEILHPLP------WNVLIG 157
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHA--KQVHGRIIRSGMDLS 178
Y N +++ ++ M G+R FT+ V C A +GR++ +++S
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPS----VIKACAALLDFAYGRVVHGSIEVS 213
Query: 179 ----NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM---------------- 218
N+ + N+LI+MY + G VD + + M + D +SWN+++
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 219 --------------W-----ACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
W C AG++ AL MR+ + + CS++
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 260 RDLDKGKQVFAFCFKVGFVYNSI--VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTS 317
L GK + + I V ++ I ++S+C+ L + +F + + + S
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 318 MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA-LVPKL 376
+IS +A ++ E+ L L P ++ +L F+ ++ G + H ++ +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
++ +L ++LV MYAK G I A +F+ + +D V++ +++ G GK V L F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
K++ R G+ PD +T+ AVL AC++ + V EG +F ME FG++ EHY+ +V++ +
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 497 AGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVA-KEIMEREPQAPFPYLV 555
AG L +A DI T+PY + M +L C+IHG+ + E A K ++E +P+ Y++
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 556 LAQAYQMMGRWESLVRVR 573
LA Y + G W LV V+
Sbjct: 634 LADMYAVTGSWSKLVTVK 651
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/618 (24%), Positives = 278/618 (44%), Gaps = 81/618 (13%)
Query: 2 YTFLKQTQGPYTSLSYCS-TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY 60
++ L+ G + + Y S +LL C+ + +HAH + GL + L + + Y
Sbjct: 69 FSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY 128
Query: 61 SDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMIS 120
S +++A + ++ ++ +P WN +I
Sbjct: 129 SAFNLLDEAQTITEN-------------------------SEILHPLP------WNVLIG 157
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHA--KQVHGRIIRSGMDLS 178
Y N +++ ++ M G+R FT+ V C A +GR++ +++S
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPS----VIKACAALLDFAYGRVVHGSIEVS 213
Query: 179 ----NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM---------------- 218
N+ + N+LI+MY + G VD + + M + D +SWN+++
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 219 --------------W-----ACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
W C AG++ AL MR+ + + CS++
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 260 RDLDKGKQVFAFCFKVGFVYNSI--VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTS 317
L GK + + I V ++ I ++S+C+ L + +F + + + S
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 318 MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHA-LVPKL 376
+IS +A ++ E+ L L P ++ +L F+ ++ G + H ++ +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
++ +L ++LV MYAK G I A +F+ + +D V++ +++ G GK V L F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
K++ R G+ PD +T+ AVL AC++ + V EG +F ME FG++ EHY+ +V++ +
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 497 AGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVA-KEIMEREPQAPFPYLV 555
AG L +A DI T+PY + M +L C+IHG+ + E A K ++E +P+ Y++
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 556 LAQAYQMMGRWESLVRVR 573
LA Y + G W LV V+
Sbjct: 634 LADMYAVTGSWSKLVTVK 651
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 221/457 (48%), Gaps = 34/457 (7%)
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRA 224
++H ++R + SN++L + I++ G + DY+ V ++ +++ +N+++
Sbjct: 22 EIHAHLLRHFLHGSNLLLAH-FISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLV 80
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
G +L+ F M+ + D++T + L+ CS+L DL GK V + GF +
Sbjct: 81 GPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDR-----WD---TALC--------------------- 315
++L++ R+ D+ ++F E W+ C
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 316 --TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
SMISS + +AL LF + + P E V +L + ++ G IH+
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 374 PKLGFESDAV-LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVT 432
G D + + + LV Y K G ++ A IF + + +++VSWNT++ G A NGK
Sbjct: 261 ESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFG 320
Query: 433 LDLFKELIREG-MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVV 491
+DLF +I EG +AP+ T VL C+Y V+ G ++F M F ++ EHY +V
Sbjct: 321 IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMV 380
Query: 492 EMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPF 551
+++S++G + EA ++ MP MW +LS C HGD+++ E A E+++ EP
Sbjct: 381 DLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSG 440
Query: 552 PYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCS 588
Y++L+ Y GRW+ + +VR M++ ++ G S
Sbjct: 441 NYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 158/325 (48%), Gaps = 6/325 (1%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
+++G + + LL C S + F K VH ++ G + + ++LY+ G +
Sbjct: 94 KSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRM 153
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNG 126
DA KVFD++S +N WN+ ++G SG + LF M R +VSWNSMIS + G
Sbjct: 154 GDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCG 213
Query: 127 FSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLG 183
+ALELF EM G P T + + +S K +H SG+ + +G
Sbjct: 214 RDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVG 273
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAEL 242
N+L+ Y K G ++ + ++ M++ +++SWN+L+ G E + F M + ++
Sbjct: 274 NALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKV 333
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF-KVGFVYNSIVSSAAIDLFSKCNRLEDSV 301
P++ T +++ CS +++G+++F + + A +DL S+ R+ ++
Sbjct: 334 APNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAF 393
Query: 302 RLFTEQD-RWDTALCTSMISSYATH 325
+ + A+ S++S+ +H
Sbjct: 394 KFLKNMPVNANAAMWGSLLSACRSH 418
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 163/387 (42%), Gaps = 40/387 (10%)
Query: 95 GQLGN---ACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
G L N A ++F + +V+ +N+MI Y+ G ++L F M+ G+ +T++
Sbjct: 47 GSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYA 106
Query: 152 ILTSLVSSPCH---AKQVHGRIIRSG------------------------------MDLS 178
L SS K VHG +IR+G M
Sbjct: 107 PLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSER 166
Query: 179 NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMR 238
NVV+ N +I + G V+ + M + I+SWNS++ + + G AL F +M
Sbjct: 167 NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI 226
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI-VSSAAIDLFSKCNRL 297
D PD+ T T++ + ++L LD GK + + G + I V +A +D + K L
Sbjct: 227 DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDL 286
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE-NIRPTEYMVSCLLSS 356
E + +F + R + ++IS A + GE + LF + E + P E +L+
Sbjct: 287 EAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLAC 346
Query: 357 FSIFLPVEVGIQIHAL-VPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLV 414
S VE G ++ L + + E+ +V + ++ G I +A + +
Sbjct: 347 CSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAA 406
Query: 415 SWNTIMMGLAYNGKVSVTLDLFKELIR 441
W +++ +G V + EL++
Sbjct: 407 MWGSLLSACRSHGDVKLAEVAAMELVK 433
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 209/413 (50%), Gaps = 3/413 (0%)
Query: 178 SNVVLGNSLIAMYGKVG-LVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK 236
SNVVL + L+ Y K+ L S SV M +I SWN ++ R+G ++ F +
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 237 M-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
M R++ + PD FT ++ CS R+ G + C K+GF + VSSA + ++
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
+L + +LF + D+ L T+M Y L +F ++ LL
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
+ ++ G +H + L + + MY K I+D A +F +D++S
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
W+++++G +G V ++ LF E+++EG+ P+ +T VL AC +G V++ ++F +
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSW-LYFRLM 362
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVI 535
E+ + P +HY V + +S+AG+L+EA +E MP + +LS C ++G+++V
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 536 ETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCS 588
E VA+E+++ +P+ Y+ LA Y GR++ +R+ M++K + GCS
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 159/351 (45%), Gaps = 18/351 (5%)
Query: 102 QLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTFSILTSLVSSP 160
+F MP R++ SWN +I ++ +GF+S +++LF+ M + + +RP FT ++ S+
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 161 CHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSL 217
AK +H ++ G S++ + ++L+ MY +G + ++ + M D + + ++
Sbjct: 148 REAKSGDLIHVLCLKLGFS-SSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAM 206
Query: 218 MWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF 277
+ G L LA F +M + D +L+ C L L GK V +C +
Sbjct: 207 FGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCS 266
Query: 278 VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVL 337
+ +A D++ KC+ L+ + +F R D +S+I Y + LF
Sbjct: 267 CLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDE 326
Query: 338 TLRENIRPTEYMVSCLLSSFSIFLPVEVG------IQIHALVPKLGFESDAVLASTLVHM 391
L+E I P +LS+ + VE +Q + +VP+L +++
Sbjct: 327 MLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHY------ASVADC 380
Query: 392 YAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
++ G++++A + +K D ++ G G V V + +ELI+
Sbjct: 381 MSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ 431
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 139/316 (43%), Gaps = 39/316 (12%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
+L C + + ++H LKLG ++ ++ + + +Y D+G + A K+FDD+
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM---- 195
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
PVRD V + +M GY G + L +F EM
Sbjct: 196 ---------------------------PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGY 228
Query: 141 AGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
+G S S+L + + + H K VHG IR L + LGN++ MY K ++D
Sbjct: 229 SGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL-GLNLGNAITDMYVKCSILD 287
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCS 257
Y+ +V + M + D+ISW+SL+ G ++ F +M + P+ T ++S C+
Sbjct: 288 YAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA 347
Query: 258 NLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD-RWDTALCT 316
+ ++K F + V ++ D S+ LE++ + + + D A+
Sbjct: 348 HGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMG 407
Query: 317 SMISS---YATHDLGE 329
+++S Y ++GE
Sbjct: 408 AVLSGCKVYGNVEVGE 423
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 236/516 (45%), Gaps = 53/516 (10%)
Query: 165 QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL----VDYSFSVILTMKKIDIISWNSLMWA 220
Q+H I+SG + + + ++ L +DY+ + M + + SWN+++
Sbjct: 41 QIHAVFIKSGQ-MRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRG 99
Query: 221 CHRAGHHE--LALAHFYKMRDAELL-PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF 277
+ + +A+ FY+M E + P++FT +++ C+ + +GKQ+ K GF
Sbjct: 100 FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 278 VYNSIVSSAAIDLFSKCNRLEDSVRLF------------TEQDRWDTALC---------- 315
+ V S + ++ C ++D+ LF T++ + D +
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 316 -----------------------TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSC 352
+MIS Y+ + +DA+ +F + +IRP +
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
+L + S +E+G +H G D VL S L+ MY+K GII+ A+H+F ++
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF 472
+++W+ ++ G A +G+ +D F ++ + G+ P + +L AC++G V+EG + F
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDL 532
M + G++P EHY +V++L ++G+L EA + + MP +W+ +L C + G++
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 533 QVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGM 592
++ + VA +M+ P Y+ L+ Y G W + +R M++K ++ GCS +
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
Query: 593 KNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGY 628
++ F H K+ ++ GY
Sbjct: 520 DGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 18/268 (6%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVF-DDISH 78
++L C + K +H LK G ++ + + +Y G + DA +F +I
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 79 KNSTS-------------WNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASN 125
K+ WN+ + G ++ G A LFD M R VVSWN+MISGY+ N
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 126 GFSSDALELFVEMQGAGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIRSGMDLSNVVL 182
GF DA+E+F EM+ +RP+ T S+L ++ + S + +H SG+ + + VL
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD-VL 311
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
G++LI MY K G+++ + V + + ++I+W++++ G A+ F KMR A +
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
P L++ CS+ +++G++ F+
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFS 399
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 237/520 (45%), Gaps = 39/520 (7%)
Query: 145 PSSFTFSILT--SLVSSPCHA----KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
PSS + S T L+ + C KQ+H +I++G+ V L ++Y
Sbjct: 17 PSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNY 76
Query: 199 SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM--RDAELLPDQFTCSTLMSVC 256
++ V + + WN+++ R+ E+A++ F M + P + T ++
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL-------------------------- 290
L G+Q+ K G +S + + + +
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 291 -----FSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP 345
F+KC ++ + LF E + + SMIS + + +DAL +F ++++P
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
+ + LL++ + E G IH + + FE ++++ + L+ MY K G I++ L++F
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 406 NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVD 465
K L WN++++GLA NG +DLF EL R G+ PD ++ VL AC + V
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 466 EGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSV 525
+ F M+ ++ ++P +HYT +V +L AG+L+EA +++ MP +W +LS
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 526 CVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFI 585
C G++++ + AK + + +P Y++L+ AY G +E V R M+++ ++ +
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEV 496
Query: 586 GCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMET 625
GCS + V+ F S H + W++ T
Sbjct: 497 GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVST 536
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 212/468 (45%), Gaps = 23/468 (4%)
Query: 8 TQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLY-SDLGHI 66
+ G + +Y + C + + + K +HA +K GL + T +R L + +
Sbjct: 18 SSGSLSGNTYLRLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFCCASPSDM 74
Query: 67 NDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGM--------PVRDVVSWNSM 118
N A VF I+HKN WN ++G +S A +F M P R +++ S+
Sbjct: 75 NYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSV 132
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL-VSSPCHAKQVHGRIIRSGMDL 177
Y G + D +L + G+ SF + + + V+ C + I GM
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGC---LIEAWRIFLGMIG 189
Query: 178 SNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM 237
+VV NS+I + K GL+D + ++ M + + +SWNS++ R G + AL F +M
Sbjct: 190 FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 238 RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRL 297
++ ++ PD FT +L++ C+ L ++G+ + + + F NSIV +A ID++ KC +
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
E+ + +F + + SMI A + E A+ LF R + P +L++
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 358 SIFLPVEVGIQIHALVP-KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI-KDLVS 415
+ V + L+ K E + +V++ G++++A + + +D V
Sbjct: 370 AHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI 429
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
W++++ G V + K L + + PD T VLL+ Y S+
Sbjct: 430 WSSLLSACRKIGNVEMAKRAAKCLKK--LDPDE-TCGYVLLSNAYASY 474
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 235/502 (46%), Gaps = 49/502 (9%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
G L A +LFD +P DV N ++ G A + + L+ EM+ G+ P +TF+ +
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 155 SLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
S + HG+++R G L N + N+LI + G + + + K
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVL-NEYVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
++W+S+ + G + A+ F +M DQ + +++ C +++D +++F
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELFD- 233
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
FTE+D +MIS Y ++A
Sbjct: 234 -------------------------------RFTEKD---VVTWNAMISGYVNCGYPKEA 259
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST---- 387
L +F P + LLS+ ++ +E G ++H + + S ++ T
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWN 319
Query: 388 -LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
L+ MYAK G ID A+ +F K +DL +WNT+++GLA + ++++F+E+ R + P
Sbjct: 320 ALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWP 378
Query: 447 DRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
+ +T V+LAC++ VDEG K F M + ++P +HY +V+ML +AG L+EA
Sbjct: 379 NEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMF 438
Query: 507 VETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRW 566
VE+M +WR +L C I+G++++ + ++++ Y++L+ Y G+W
Sbjct: 439 VESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQW 498
Query: 567 ESLVRVRKDMEQKCTKEFIGCS 588
+ + +VRK + K+ G S
Sbjct: 499 DGVQKVRKMFDDTRVKKPTGVS 520
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 166/300 (55%), Gaps = 24/300 (8%)
Query: 60 YSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMI 119
Y+ G I++A+++FD++ +K+ +WN+ + G LK ++ +A +LFD +DVV+WN+MI
Sbjct: 188 YAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMI 247
Query: 120 SGYASNGFSSDALELFVEMQGAGMRPSSFT-FSILT--SLVSSPCHAKQVHGRIIRSGMD 176
SGY + G+ +AL +F EM+ AG P T S+L+ +++ K++H I+ +
Sbjct: 248 SGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASV 307
Query: 177 LSNVVLG----NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM--WACHRAGHHELA 230
S++ +G N+LI MY K G +D + V +K D+ +WN+L+ A H H E +
Sbjct: 308 SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH---HAEGS 364
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS-SAAID 289
+ F +M+ ++ P++ T ++ CS+ +D+G++ F+ + + +I +D
Sbjct: 365 IEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVD 424
Query: 290 LFSKCNRLEDSVRLFTEQDR-------WDTALCTSMISSYATHDLGEDALHLFVLTLREN 342
+ + +LE++ +F E + W T L I Y +LG+ A + +L++R++
Sbjct: 425 MLGRAGQLEEAF-MFVESMKIEPNAIVWRTLLGACKI--YGNVELGKYA-NEKLLSMRKD 480
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 160/390 (41%), Gaps = 58/390 (14%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLI--AMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
KQ+H ++ +G+ +SN+ + LI A G + Y+ + + K D+ N ++
Sbjct: 29 KQIHASMVVNGL-MSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV---GFV 278
++ E ++ + +M + PD++T + ++ CS L G FAF KV GFV
Sbjct: 88 AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNG---FAFHGKVVRHGFV 144
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF-VL 337
N V +A I + C L + LF + + +SM S YA ++A+ LF +
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 338 TLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGI 397
++ + + CL K
Sbjct: 205 PYKDQVAWNVMITGCL----------------------------------------KCKE 224
Query: 398 IDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
+D A +F+ KD+V+WN ++ G G L +FKE+ G PD +T+ ++L A
Sbjct: 225 MDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 458 CNYGSFVDEG----IKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
C ++ G I I + + G + +++M +K G + AI++ +
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-D 343
Query: 514 ITLDMWRLILSVCVIH---GDLQVIETVAK 540
L W ++ +H G +++ E + +
Sbjct: 344 RDLSTWNTLIVGLALHHAEGSIEMFEEMQR 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/476 (20%), Positives = 184/476 (38%), Gaps = 105/476 (22%)
Query: 29 KSVNFVKIVHAHFLKLGL-NTYTYLGNRCLDL-YSDLGHINDALKVFDDISHKNSTSWNI 86
K++ +K +HA + GL + + +G S G + A K+FD+I
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEI---------- 72
Query: 87 CLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPS 146
P DV N ++ G A + + L+ EM+ G+ P
Sbjct: 73 ---------------------PKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPD 111
Query: 147 SFTFSILTSLVSS---PCHAKQVHGRIIRSGMDLSNVV-------------LG------- 183
+TF+ + S + HG+++R G L+ V LG
Sbjct: 112 RYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFD 171
Query: 184 ----------NSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR---------- 223
+S+ + Y K G +D + + M D ++WN ++ C +
Sbjct: 172 DSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSAREL 231
Query: 224 ---------------------AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDL 262
G+ + AL F +MRDA PD T +L+S C+ L DL
Sbjct: 232 FDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 263 DKGKQVFAFCFKVGFVYNSI-----VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTS 317
+ GK++ + + V +SI + +A ID+++KC ++ ++ +F D + +
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNT 351
Query: 318 MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL- 376
+I A H E ++ +F R + P E ++ + S V+ G + +L+ +
Sbjct: 352 LIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMY 410
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSV 431
E + +V M + G +++A KI+ + + W T++ G V +
Sbjct: 411 NIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 29/300 (9%)
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYN-----SIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
C N+R L KQ+ A G + N ++ SA++ S L+ + +LF E +
Sbjct: 22 CKNIRTL---KQIHASMVVNGLMSNLSVVGELIYSASL---SVPGALKYAHKLFDEIPKP 75
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
D ++C ++ A E + L+ + + P Y + +L + S G H
Sbjct: 76 DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFH 135
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVS 430
V + GF + + + L+ +A G + A +F+++ V+W+++ G A GK+
Sbjct: 136 GKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKID 195
Query: 431 VTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV 490
+ LF E+ + D++ ++ C +D ++F TE V + +
Sbjct: 196 EAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRF-TEKDVVT----WNAM 246
Query: 491 VEMLSKAGMLKEAIDIVETM------PYTITLDMWRLILSVCVIHGDLQVIETVAKEIME 544
+ G KEA+ I + M P +T+ +LS C + GDL+ + + I+E
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTI---LSLLSACAVLGDLETGKRLHIYILE 303
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 238/507 (46%), Gaps = 47/507 (9%)
Query: 124 SNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH--AKQVHGRIIRSGMDLSNVV 181
SN +S+ L+ V + + P+ + L ++SP K++H II++G ++
Sbjct: 16 SNHYSTFPLKQNV----SSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQ-PDLN 70
Query: 182 LGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAE 241
+ L+ ++ K G + Y+ V + K + ++N ++ + G + L +M +
Sbjct: 71 ISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSG 130
Query: 242 LLPDQFTCSTLMSVCSNLRD----LDKG--KQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
D +T S ++ SN R L + + V A K + ++ +A +D + K
Sbjct: 131 EKADGYTLSMVLKA-SNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSG 189
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLT----------------- 338
+LE + +F + CTSMIS Y EDA +F T
Sbjct: 190 KLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSR 249
Query: 339 ---------------LRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV 383
R P + ++ + S+ EVG Q+HA + K G +
Sbjct: 250 SGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIK 309
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
+ S+L+ MYAK G I+DA +F++ + K++ SW +++ G NG L+LF +
Sbjct: 310 MGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+ P+ +T L AC++ VD+G +IF SM+ ++ +KP EHY +V+++ +AG L +A
Sbjct: 370 IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKA 429
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIME-REPQAPFPYLVLAQAYQM 562
+ MP D+W +LS C +HG++++ A E+ + + P YL L+ Y
Sbjct: 430 FEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYAS 489
Query: 563 MGRWESLVRVRKDMEQKCTKEFIGCSW 589
+W+++ ++R+ M+++ + IG SW
Sbjct: 490 NDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 135/239 (56%), Gaps = 5/239 (2%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
++VHA +K + L +D Y G + A VF+ + +N + G +
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSD-ALELFVEMQGAGMRPSSFTFSIL 153
G + +A ++F+ V+D+V +N+M+ G++ +G ++ ++++++ MQ AG P+ TF+ +
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 154 T---SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
S+++S +QVH +I++SG+ +++ +G+SL+ MY K G ++ + V M++ +
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGV-YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKN 338
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+ SW S++ + G+ E AL F +M++ + P+ T +S CS+ +DKG ++F
Sbjct: 339 VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIF 397
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 42/304 (13%)
Query: 85 NICLKGL---LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA 141
NI +K L LK G L A Q+FD +P + ++N MISGY +G + L L M +
Sbjct: 70 NISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYS 129
Query: 142 GMRPSSFTFSIL--------TSLVSSPCHAKQVHGRIIRSGMDL---------------- 177
G + +T S++ ++++ + VH RII+ ++L
Sbjct: 130 GEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSG 189
Query: 178 --------------SNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
NVV S+I+ Y G V+ + + T K DI+ +N+++ R
Sbjct: 190 KLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSR 249
Query: 224 AGH-HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
+G + ++ + M+ A P+ T ++++ CS L + G+QV A K G +
Sbjct: 250 SGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIK 309
Query: 283 VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLREN 342
+ S+ +D+++KC + D+ R+F + + TSMI Y + E+AL LF
Sbjct: 310 MGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 343 IRPT 346
I P
Sbjct: 370 IEPN 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 46/219 (21%)
Query: 18 CSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
CS L H + Q+ VHA +K G+ T+ +G+ LD+Y+ G INDA +VFD +
Sbjct: 283 CSVLTSHEVGQQ-------VHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ 335
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMP----VRDVVSWNSMISGYASNGFSSDALE 133
KN SW + G K+G A +LF M + V++ +S + +G E
Sbjct: 336 EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYE 395
Query: 134 LFVEMQ-GAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
+F MQ M+P ++ + L+ G+
Sbjct: 396 IFESMQRDYSMKPKMEHYACIVDLM---------------------------------GR 422
Query: 193 VGLVDYSFSVILTM-KKIDIISWNSLMWACHRAGHHELA 230
G ++ +F M ++ D W +L+ +C+ G+ ELA
Sbjct: 423 AGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/541 (26%), Positives = 248/541 (45%), Gaps = 21/541 (3%)
Query: 76 ISHKNSTSWNICLKGLLKSGQ---LGNACQLFDGMPVRD-VVSWNSMISGYASNGFSSDA 131
+ H T+ I K L+ S +G A +LFD P RD NSMI Y D+
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 132 LELFVEMQGAG-MRPSSFTFSILTSLVS-SPC--HAKQVHGRIIRSGMDLSNVVLGNSLI 187
L+ +++ P +FTF+ LT S S C Q+H +I R G +++ + ++
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGF-CADMYVSTGVV 120
Query: 188 AMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQF 247
MY K G + + + M +SW +L+ R G +LA F +M + D
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVV 177
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS-SAAIDLFSKCNRLEDSVRLFTE 306
+ +M D+ +++F + ++++ + I + ++ + +LF
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFD-----EMTHKTVITWTTMIHGYCNIKDIDAARKLFDA 232
Query: 307 QDRWDTALCTSMISSYATHDLGEDALHLFV-LTLRENIRPTEYMVSCLLSSFSIFLPVEV 365
+ +MI Y + ++ + LF + ++ P + + +L + S + +
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 366 GIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAY 425
G H V + + + + ++ MY+K G I+ A IF+E K + SWN ++ G A
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 426 NGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEE 485
NG LDLF ++ E PD IT+ AV+ ACN+G V+EG K F M E G+ E
Sbjct: 353 NGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIE 410
Query: 486 HYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMER 545
HY +V++L +AG LKEA D++ MP+ + LS C + D++ E + K+ +E
Sbjct: 411 HYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVEL 470
Query: 546 EPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQ 605
EPQ Y++L Y RW+ V+ M + K+ +GCS + V F S
Sbjct: 471 EPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTT 530
Query: 606 H 606
H
Sbjct: 531 H 531
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 160/367 (43%), Gaps = 40/367 (10%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H+ + G Y+ +D+Y+ G + A FD++ H++ SW + G ++ G+
Sbjct: 100 LHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGE 159
Query: 97 LGNACQLFDGMP-VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
L A +LFD MP V+DVV +N+M+ G+ +G + A LF EM
Sbjct: 160 LDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM----------------- 202
Query: 156 LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN 215
H V+ ++I Y + +D + + M + +++SWN
Sbjct: 203 ----------TH----------KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWN 242
Query: 216 SLMWACHRAGHHELALAHFYKMR-DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
+++ + + + F +M+ L PD T +++ S+ L G+ F +
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
V +A +D++SKC +E + R+F E A +MI YA + AL L
Sbjct: 303 KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDL 362
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK 394
FV + E +P E + ++++ + VE G + ++ ++G + +V + +
Sbjct: 363 FVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGR 421
Query: 395 FGIIDDA 401
G + +A
Sbjct: 422 AGSLKEA 428
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N +D + G + A ++FD+++HK +W + G + A +LFD MP R++V
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 114 SWNSMISGYASNGFSSDALELFVEMQG-AGMRPSSFT-FSILTSLVSSPCHA--KQVHGR 169
SWN+MI GY N + + LF EMQ + P T S+L ++ + + + H
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 170 IIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHEL 229
+ R +D V + +++ MY K G ++ + + M + + SWN+++ G+
Sbjct: 300 VQRKKLD-KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARA 358
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAID 289
AL F M E PD+ T +++ C++ +++G++ F ++G +D
Sbjct: 359 ALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVD 417
Query: 290 LFSKCNRLEDSVRLFT 305
L + L+++ L T
Sbjct: 418 LLGRAGSLKEAEDLIT 433
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 207/416 (49%), Gaps = 4/416 (0%)
Query: 92 LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTF 150
K G++G A ++FD + RD+V W +MI+G A N +AL LF M + P+S
Sbjct: 260 FKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVIL 319
Query: 151 SILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
+ + + V + K+VH +++S + + + LI +Y K G + V K
Sbjct: 320 TTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK 379
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ + ISW +LM G + AL M+ PD T +T++ VC+ LR + +GK+
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ + K F+ N + ++ + ++SKC E +RLF ++ + T+MI Y +
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCD 499
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
+ +F L L RP + +L+ S +++G ++H + K FES +++
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAR 559
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
++ MY K G + A F+ +K ++W I+ N ++ F++++ G P+
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPN 619
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
T AVL C+ FVDE + F M + ++P EEHY+ V+E+L++ G ++EA
Sbjct: 620 TFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 213/466 (45%), Gaps = 46/466 (9%)
Query: 4 FLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDL 63
+L+Q P + ++ S LL+ C+ +KS+ K VH H GL + +L + + +Y+
Sbjct: 101 YLEQRGIPVNATTF-SALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTAC 159
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
G + DA KVFD+ STS N V SWN+++ G
Sbjct: 160 GSVKDAQKVFDE-----STSSN--------------------------VYSWNALLRGTV 188
Query: 124 SNGFS--SDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ---VHGRIIRSGMDLS 178
+G D L F EM+ G+ + ++ S + + +Q H I++G+ +
Sbjct: 189 ISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL-FN 247
Query: 179 NVVLGNSLIAMY---GKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFY 235
+V L SL+ MY GKVGL F I+ DI+ W +++ AL F
Sbjct: 248 SVFLKTSLVDMYFKCGKVGLARRVFDEIVER---DIVVWGAMIAGLAHNKRQWEALGLFR 304
Query: 236 KM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV-GFVYNSIVSSAAIDLFSK 293
M + ++ P+ +T++ V +++ L GK+V A K +V V S IDL+ K
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 294 CNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCL 353
C + R+F + + T+++S YA + + AL V +E RP ++ +
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 354 LSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDL 413
L + ++ G +IH K F + L ++L+ MY+K G+ + + +F+ + +++
Sbjct: 425 LPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACN 459
+W ++ N + +++F+ ++ PD +T+ VL C+
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 192/406 (47%), Gaps = 12/406 (2%)
Query: 135 FVEMQGAGMRPSSFTFSILTSLV--SSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
++E +G + ++F+ ++L + V S H KQVH I +G++ SN L L+ MY
Sbjct: 101 YLEQRGIPVNATTFS-ALLEACVRRKSLLHGKQVHVHIRINGLE-SNEFLRTKLVHMYTA 158
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAG--HHELALAHFYKMRDAELLPDQFTCS 250
G V + V ++ SWN+L+ +G ++ L+ F +MR+ + + ++ S
Sbjct: 159 CGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLS 218
Query: 251 TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
+ + L +G + A K G + + ++ +D++ KC ++ + R+F E
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 311 DTALCTSMISSYATHDLGEDALHLF-VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
D + +MI+ A + +AL LF + E I P +++ +L +++G ++
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 370 HALVPK-LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
HA V K + + S L+ +Y K G + +F +K ++ +SW +M G A NG+
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF-FSMETEFGVKPGEEHY 487
L + +EG PD +T+A VL C + +G +I ++++ F P
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLV 456
Query: 488 TYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQ 533
T ++ M SK G+ + I + + + + W ++ V + DL+
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRLEQR-NVKAWTAMIDCYVENCDLR 501
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 14/322 (4%)
Query: 142 GMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSF- 200
G+R + S+ TSL P H G +S + S ++ A K +F
Sbjct: 8 GIRDLPASLSVTTSLNHRP-HRSDKDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFP 66
Query: 201 -SVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
S+ L K II + ++A R + E+AL + + + T S L+ C
Sbjct: 67 SSLPLHSKNPYIIHRDIQIFA--RQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRR 124
Query: 260 RDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR-----WDTAL 314
+ L GKQV G N + + + +++ C ++D+ ++F E W+ L
Sbjct: 125 KSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALL 184
Query: 315 CTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP 374
++IS + +D L F + Y +S + SF+ + G++ HAL
Sbjct: 185 RGTVISGKKRY---QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAI 241
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLD 434
K G + L ++LV MY K G + A +F+E +D+V W ++ GLA+N + L
Sbjct: 242 KNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALG 301
Query: 435 LFKELI-REGMAPDRITLAAVL 455
LF+ +I E + P+ + L +L
Sbjct: 302 LFRTMISEEKIYPNSVILTTIL 323
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 102 QLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC 161
+LFD + R+V +W +MI Y N +E+F M + RP S T + ++ S
Sbjct: 474 RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLK 533
Query: 162 H---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG---LVDYSFSVILTMKKIDIISWN 215
K++HG I++ + S + +I MYGK G ++SF + + +W
Sbjct: 534 ALKLGKELHGHILKKEFE-SIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSL---TWT 589
Query: 216 SLMWACHRAGHHEL---ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
+++ A G +EL A+ F +M P+ FT + ++S+CS +D+ + F
Sbjct: 590 AIIEA---YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Query: 273 FKVGFVYNSIVS----SAAIDLFSKCNRLEDSVRL 303
++ YN S S I+L ++C R+E++ RL
Sbjct: 647 LRM---YNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 231/516 (44%), Gaps = 77/516 (14%)
Query: 87 CLKGL-LKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRP 145
CL GL LK G LG + Q+FD MP RD VS+NSMI GY G A ELF M
Sbjct: 161 CLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP------ 214
Query: 146 SSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG-LVDYSFSVIL 204
M++ N++ NS+I+ Y + VD + +
Sbjct: 215 -----------------------------MEMKNLISWNSMISGYAQTSDGVDIASKLFA 245
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
M + D+ISWNS++ + G E A F +++P RD+
Sbjct: 246 DMPEKDLISWNSMIDGYVKHGRIEDAKGLF------DVMPR--------------RDV-- 283
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
+ + ID ++K + + LF + D SM++ Y
Sbjct: 284 -----------------VTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Query: 325 HDLGEDALHLFVLTLRE-NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAV 383
+ +AL +F +E ++ P + + +L + + + I +H + + F
Sbjct: 327 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK 386
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
L L+ MY+K G I A+ +F + K + WN ++ GLA +G D+ ++ R
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS 446
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+ PD IT VL AC++ V EG+ F M + ++P +HY +V++LS++G ++ A
Sbjct: 447 LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Query: 504 IDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMM 563
+++E MP +WR L+ C H + + E VAK ++ + P Y++L+ Y
Sbjct: 507 KNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASF 566
Query: 564 GRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
G W+ + RVR M+++ ++ GCSW + V+ F
Sbjct: 567 GMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 207/440 (47%), Gaps = 29/440 (6%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H K GL + +L N + LY G + + ++FD + ++S S+N + G +K G
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 97 LGNACQLFDGMP--VRDVVSWNSMISGYASNGFSSD-ALELFVEMQGAGMRPSSFTFSIL 153
+ +A +LFD MP +++++SWNSMISGYA D A +LF +M P S
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM------PEKDLISWN 256
Query: 154 TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
+ + H + + + M +VV ++I Y K+G V ++ ++ M D+++
Sbjct: 257 SMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 214 WNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
+NS+M + +H AL F M +++ LLPD T ++ + L L K + +
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
+ F + A ID++SKC ++ ++ +F + +MI A H LGE A
Sbjct: 377 VEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAF 436
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI-------QIHALVPKLGFESDAVLA 385
+ + R +++P + +L++ S V+ G+ + H + P+L
Sbjct: 437 DMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH------Y 490
Query: 386 STLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELI-REG 443
+V + ++ G I+ A ++ E ++ + V W T + +++ + + K LI + G
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAG 550
Query: 444 MAPDRITLAAVLLACNYGSF 463
P + VLL+ Y SF
Sbjct: 551 YNPS----SYVLLSNMYASF 566
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 27/328 (8%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N +D Y G I DA +FD + ++ +W + G K G + +A LFD MP RDVV
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 114 SWNSMISGYASNGFSSDALELFVEMQG-AGMRPSSFTFSILTSLVSS---PCHAKQVHGR 169
++NSM++GY N + +ALE+F +M+ + + P T I+ ++ A +H
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 170 IIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHEL 229
I+ L LG +LI MY K G + ++ V ++ I WN+++ G E
Sbjct: 376 IVEKQFYLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS----- 284
A ++ L PD T +++ CS+ + +G CF++ + I
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG----LLCFELMRRKHKIEPRLQHY 490
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDR------WDTALCTSMISSYATHDLGE-DALHLFVL 337
+D+ S+ +E + L E W T L + S + + GE A HL
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFL--TACSHHKEFETGELVAKHLI-- 546
Query: 338 TLRENIRPTEY-MVSCLLSSFSIFLPVE 364
L+ P+ Y ++S + +SF ++ V
Sbjct: 547 -LQAGYNPSSYVLLSNMYASFGMWKDVR 573
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 166/375 (44%), Gaps = 30/375 (8%)
Query: 147 SFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYG---KVGLVDYSFSVI 203
S T +L S +S Q+HGR+I++G+ + N L ++ + + L D++ V
Sbjct: 13 SSTIHVLGSCKTSD-DVNQIHGRLIKTGI-IKNSNLTTRIVLAFASSRRPYLADFARCVF 70
Query: 204 -------LTMKKI-DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
+ ++ D WN+++ + AL M + + D+F+ S ++
Sbjct: 71 HEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKA 130
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
CS L + G Q+ F K G + + + I L+ KC L S ++F + D+
Sbjct: 131 CSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY 190
Query: 316 TSMISSYATHDLGEDALHLFVLTLRE--NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
SMI Y L A LF L E N+ M+S + V++ ++ A +
Sbjct: 191 NSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD---GVDIASKLFADM 247
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
P E D + ++++ Y K G I+DA +F+ +D+V+W T++ G A G V
Sbjct: 248 P----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAK 303
Query: 434 DLFKELIREGMAPDRITLAAVLLACNY--GSFVDEGIKIFFSMETEFGVKPGEEHYTYVV 491
LF ++ P R +A + Y + E ++IF ME E + P + V+
Sbjct: 304 TLFDQM------PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 357
Query: 492 EMLSKAGMLKEAIDI 506
+++ G L +AID+
Sbjct: 358 PAIAQLGRLSKAIDM 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 36/301 (11%)
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNR--LEDSVRL-- 303
+ S+ + V + + D Q+ K G + NS +++ + F+ R L D R
Sbjct: 11 SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70
Query: 304 -------FTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
F+ + D L ++I S++ AL L L L + ++ +S +L +
Sbjct: 71 HEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKA 130
Query: 357 FSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSW 416
S V+ G+QIH + K G SD L + L+ +Y K G + + +F+ +D VS+
Sbjct: 131 CSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY 190
Query: 417 NTIMMGLAYNGKVSVTLDLFKELIRE--------------GMAPDRITLAAVLLA----- 457
N+++ G G + +LF + E D + +A+ L A
Sbjct: 191 NSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 458 --CNYGSFVDEGIKIFFSMETE--FGVKPGEEHYTY--VVEMLSKAGMLKEAIDIVETMP 511
++ S +D +K + + F V P + T+ +++ +K G + A + + MP
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 512 Y 512
+
Sbjct: 311 H 311
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 239/516 (46%), Gaps = 13/516 (2%)
Query: 15 LSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFD 74
L C +LD + ++ +H +K G + L +D+Y ++DA +VFD
Sbjct: 169 LKSCGLILD-------LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 75 DISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALEL 134
+I + + SWN+ ++ L+ G A +F M +V N +S S ALE+
Sbjct: 222 EIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEV 281
Query: 135 FVEMQGAGMRPSSFTFSILTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYG 191
+ ++ S +++++ V C + R+ ++ S ++ Y
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRS-KDLKSWTSAMSGYA 340
Query: 192 KVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
GL + + M + +I+SWN+++ A + AL MR D T
Sbjct: 341 MSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVW 400
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW- 310
+++VCS + D+ GKQ F ++ G+ N IV++A +D++ KC L+ + F +
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR 460
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
D ++++ A E AL F ++ +P++Y ++ LL+ + + +G IH
Sbjct: 461 DEVSWNALLTGVARVGRSEQALSFFE-GMQVEAKPSKYTLATLLAGCANIPALNLGKAIH 519
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVS 430
+ + G++ D V+ +V MY+K D A+ +F E +DL+ WN+I+ G NG+
Sbjct: 520 GFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSK 579
Query: 431 VTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV 490
+LF L EG+ PD +T +L AC V+ G + F SM T++ + P EHY +
Sbjct: 580 EVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCM 639
Query: 491 VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVC 526
+E+ K G L + + + MP+ + M I C
Sbjct: 640 IELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDAC 675
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 224/481 (46%), Gaps = 39/481 (8%)
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMR 144
N ++ K G + +A +LF+ MP RD SWN++I+ A NG S + +F M G+R
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 145 PSSFTFS-ILTS--LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
+ +F+ +L S L+ +Q+H +++ G NV L S++ +YGK ++ +
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYS-GNVDLETSIVDVYGKCRVMSDARR 218
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
V + +SWN ++ G ++ A+ F+KM + + P T S++M CS
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISS 321
L+ GK + A K+ V +++VS++ D++ KC+RLE + R+F + D TS +S
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 322 YATHDLGEDALHLFVLTLRENIRPTEYMVSC----------------------------- 352
YA L +A LF L NI M+
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 353 --LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE-TK 409
+L+ S V++G Q H + + G++++ ++A+ L+ MY K G + A F + ++
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE 458
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIK 469
++D VSWN ++ G+A G+ L F+ + E P + TLA +L C ++ G K
Sbjct: 459 LRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLG-K 516
Query: 470 IFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIH 529
G K +V+M SK AI++ + T L +W I+ C +
Sbjct: 517 AIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA-TRDLILWNSIIRGCCRN 575
Query: 530 G 530
G
Sbjct: 576 G 576
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 144/298 (48%), Gaps = 7/298 (2%)
Query: 145 PSSFTFSILTSLVSSPCHAKQ--VHGRIIRSGM----DLSNVVLGNSLIAMYGKVGLVDY 198
P ++ + L S C +K V R ++S + L + L N I YGK G VD
Sbjct: 56 PEPVSYWLYERLFRS-CSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDD 114
Query: 199 SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSN 258
+ + M + D SWN+++ AC + G + F +M + + + + ++ C
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL 174
Query: 259 LRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSM 318
+ DL +Q+ K G+ N + ++ +D++ KC + D+ R+F E +
Sbjct: 175 ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF 378
+ Y ++A+ +F L N+RP + VS ++ + S L +EVG IHA+ KL
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSV 294
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
+D V+++++ MY K ++ A +F++T+ KDL SW + M G A +G +LF
Sbjct: 295 VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELF 352
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 384 LASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
L + + Y K G +DDA +F E +D SWN ++ A NG +F+ + R+G
Sbjct: 98 LLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG 157
Query: 444 MAPDRITLAAVLLAC 458
+ + A VL +C
Sbjct: 158 VRATETSFAGVLKSC 172
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 253/561 (45%), Gaps = 72/561 (12%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
+++HAH + G+ T + + + Y + G + DA KVFD+
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDE------------------- 76
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
MP RD+ MI A NG+ ++L+ F EM G++ +F I+
Sbjct: 77 ------------MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAF---IVP 121
Query: 155 SLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
SL+ + + K +H +++ + S+ + +SLI MY K G V + V + +
Sbjct: 122 SLLKASRNLLDREFGKMIHCLVLKFSYE-SDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D++ +N+++ + AL M+ + PD T + L+S S++R+ +K ++
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLG 328
G+ + D TS+IS +
Sbjct: 241 LELMCLDGY-------------------------------KPDVVSWTSIISGLVHNFQN 269
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
E A F L + P + LL + + ++ G +IH G E + S L
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+ MY K G I +A+ +F +T K V++N+++ A +G ++LF ++ G D
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDH 389
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
+T A+L AC++ D G +F M+ ++ + P EHY +V++L +AG L EA ++++
Sbjct: 390 LTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 509 TMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWES 568
M L +W +L+ C HG++++ AK + E EP+ L+L Y G WES
Sbjct: 450 AMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWES 509
Query: 569 LVRVRKDMEQKCTKEFIGCSW 589
+VR++K +++K + F+G SW
Sbjct: 510 VVRMKKMIKKKRFRRFLGSSW 530
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 159/367 (43%), Gaps = 41/367 (11%)
Query: 161 CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWA 220
C + +H ++ SG+ + L+ Y + G V + V M K DI ++ A
Sbjct: 33 CRGRVLHAHLVTSGIARLTRIAAK-LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 221 CHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYN 280
C R G+++ +L F +M L D F +L+ NL D + GK + K + +
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 281 SIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLR 340
+ + S+ ID++SK + ++ ++F++ D + +MIS YA + ++AL+L
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
I+P + L+S FS E +I L+ G++
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKP-------------------- 251
Query: 401 ALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNY 460
D+VSW +I+ GL +N + D FK+++ G+ P+ T+ +L AC
Sbjct: 252 -----------DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Query: 461 GSFVDEGIKIFFSMETEFGVKPGEEHYTYV----VEMLSKAGMLKEAIDIVETMPYTITL 516
+++ G +I + V G E + +V ++M K G + EA+ + P T+
Sbjct: 301 LAYMKHGKEIH-----GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355
Query: 517 DMWRLIL 523
+I
Sbjct: 356 TFNSMIF 362
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 118/225 (52%), Gaps = 6/225 (2%)
Query: 237 MRDAELLPDQFTCSTLMS----VCSNLRD--LDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
M+ ++P F ++ S + +N RD +G+ + A G + +++ +
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 291 FSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMV 350
+ +C ++ D+ ++F E + D + C MI + A + +++L F ++ ++ ++V
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 351 SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI 410
LL + L E G IH LV K +ESDA + S+L+ MY+KFG + +A +F++
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 411 KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
+DLV +N ++ G A N + L+L K++ G+ PD IT A++
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALI 225
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 122/279 (43%), Gaps = 43/279 (15%)
Query: 33 FVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLL 92
F K++H LK + ++ + +D+YS G + +A KVF D+ ++ +N + G
Sbjct: 135 FGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYA 194
Query: 93 KSGQLGNACQLFDGMPV----RDVVSWNSMISGYAS----------------NGFSSD-- 130
+ Q A L M + DV++WN++ISG++ +G+ D
Sbjct: 195 NNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVV 254
Query: 131 -----------------ALELFVEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRI 170
A + F +M G+ P+S T L ++ H K++HG
Sbjct: 255 SWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYS 314
Query: 171 IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELA 230
+ +G++ V ++L+ MYGK G + + + K +++NS+++ G + A
Sbjct: 315 VVTGLEDHGFVR-SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKA 373
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+ F +M D T + +++ CS+ D G+ +F
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 234/511 (45%), Gaps = 47/511 (9%)
Query: 103 LFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSS 159
+F R+ N++I G N ++ F+ M G++P TF + S +
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 160 PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL----TMKKIDIISWN 215
+ +H +++ +D + V SL+ MY K G + ++F V +KK I+ WN
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVR-LSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
L+ RA +A F M + + + STL+ + +L++ KQ+F
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFEL---- 252
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
++VS W T++I+ ++ E A+ +
Sbjct: 253 -MPEKNVVS-------------------------W-----TTLINGFSQTGDYETAISTY 281
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKF 395
L + ++P EY ++ +LS+ S + GI+IH + G + D + + LV MYAK
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 396 GIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
G +D A +F+ KD++SW ++ G A +G+ + F++++ G PD + AVL
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTIT 515
AC S VD G+ F SM ++ ++P +HY VV++L +AG L EA ++VE MP
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 516 LDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKD 575
L W + C H + E+V++ ++E +P+ Y+ L + + G + + + R
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLS 521
Query: 576 MEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
++++ + +G S+ + + F + H
Sbjct: 522 LQKRIKERSLGWSYIELDGQLNKFSAGDYSH 552
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Query: 69 ALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFS 128
A +F + +NS SW+ +KG + SG+L A QLF+ MP ++VVSW ++I+G++ G
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 129 SDALELFVEMQGAGMRPSSFTFSILTSLVSSP---CHAKQVHGRIIRSGMDLSNVVLGNS 185
A+ + EM G++P+ +T + + S S ++HG I+ +G+ L + G +
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAI-GTA 333
Query: 186 LIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM--WACHRAGHHELALAHFYKMRDAELL 243
L+ MY K G +D + +V M DI+SW +++ WA H G A+ F +M +
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVH--GRFHQAIQCFRQMMYSGEK 391
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVF 269
PD+ +++ C N ++D G F
Sbjct: 392 PDEVVFLAVLTACLNSSEVDLGLNFF 417
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 143/365 (39%), Gaps = 72/365 (19%)
Query: 232 AHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLF 291
A Y D + PD+ +L+ C + L + V A + G V +S V++ +
Sbjct: 15 AKIYFPADRQASPDESHFISLIHACKDTASL---RHVHAQILRRG-VLSSRVAAQLVSCS 70
Query: 292 SKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVS 351
S + S+ +F + + + ++I + E ++ F+L LR ++P
Sbjct: 71 SLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFP 130
Query: 352 CLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNET--- 408
+L S S +G +HA K + D+ + +LV MYAK G + A +F E+
Sbjct: 131 FVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDR 190
Query: 409 -----------------KIKDL---------------VSWNTIMMGLAYNGKVSVTLDLF 436
+ KD+ SW+T++ G +G+++ LF
Sbjct: 191 IKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLF 250
Query: 437 K-------------------------------ELIREGMAPDRITLAAVLLACNYGSFVD 465
+ E++ +G+ P+ T+AAVL AC+ +
Sbjct: 251 ELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALG 310
Query: 466 EGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSV 525
GI+I + + G+K T +V+M +K G L A + M + L W ++
Sbjct: 311 SGIRIHGYI-LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS-WTAMIQG 368
Query: 526 CVIHG 530
+HG
Sbjct: 369 WAVHG 373
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 223/460 (48%), Gaps = 18/460 (3%)
Query: 164 KQVHGRIIRSGM--DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
KQ+H +R+ + + + L ++ + V+Y+F V +++ WN+L+ AC
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 222 -HRAGHHELALAHFYKMRD-AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY 279
H E A + KM + E PD+ T ++ C+ + +GKQV K GF
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTL 339
+ V++ I L+ C L+ + ++F E SMI + + AL LF +
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF-REM 243
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK---LGFESDAVLASTLVHMYAKFG 396
+ + P Y + +LS+ + + +G HA + + + D ++ ++L+ MY K G
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 397 IIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELI--REGMAPDRITLAAV 454
+ A +F + +DL SWN +++G A +G+ ++ F ++ RE + P+ +T +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 455 LLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTI 514
L+ACN+ FV++G + F M ++ ++P EHY +V+++++AG + EAID+V +MP
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 515 TLDMWRLILSVCVIHG-DLQVIETVAKEIM-------EREPQAPFPYLVLAQAYQMMGRW 566
+WR +L C G +++ E +A+ I+ Y++L++ Y RW
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 567 ESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ VRK M + ++ GCS + + F + H
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSH 523
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 39/242 (16%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K VH +K G Y+ N + LY G ++ A KVFD+
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE------------------- 211
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SIL 153
MP R +VSWNSMI G AL+LF EMQ + P +T S+L
Sbjct: 212 ------------MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVL 258
Query: 154 TSL--VSSPCHAKQVHGRIIRS-GMDLS-NVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
++ + S H ++R +D++ +V++ NSLI MY K G + + V M+K
Sbjct: 259 SACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR 318
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAE--LLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D+ SWN+++ G E A+ F +M D + P+ T L+ C++ ++KG+Q
Sbjct: 319 DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Query: 268 VF 269
F
Sbjct: 379 YF 380
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM--QGAGMRPSSFTF 150
K G L A Q+F GM RD+ SWN+MI G+A++G + +A+ F M + +RP+S TF
Sbjct: 301 KCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTF 360
Query: 151 SILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
L+ + H +Q ++R + ++ + + G + + +++
Sbjct: 361 ---VGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 205 TMK-KIDIISWNSLMWACHRAG 225
+M K D + W SL+ AC + G
Sbjct: 418 SMPMKPDAVIWRSLLDACCKKG 439
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 192/372 (51%), Gaps = 1/372 (0%)
Query: 259 LRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSM 318
+ D+ G+ + + + GF V ++ + L++ C + + ++F + D S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 319 ISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF 378
I+ +A + E+AL L+ + I+P + + LLS+ + + +G ++H + K+G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 379 ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
+ ++ L+ +YA+ G +++A +F+E K+ VSW ++++GLA NG ++LFK
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 439 L-IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKA 497
+ EG+ P IT +L AC++ V EG + F M E+ ++P EH+ +V++L++A
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 498 GMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLA 557
G +K+A + +++MP + +WR +L C +HGD + E +I++ EP Y++L+
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 558 QAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXX 617
Y RW + ++RK M + K+ G S + N V+ F H
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 618 XXVWEMETEGYV 629
+ +EGYV
Sbjct: 361 EMTGRLRSEGYV 372
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 11/217 (5%)
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
+ +H +IRSG S + + NSL+ +Y G V ++ V M + D+++WNS++
Sbjct: 7 GETIHSVVIRSGFG-SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
G E ALA + +M + PD FT +L+S C+ + L GK+V + KVG N
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 283 VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLREN 342
S+ +DL+++C R+E++ LF E ++ TS+I A + G++A+ LF +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF-----KY 180
Query: 343 IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFE 379
+ TE ++ C ++ I H + K GFE
Sbjct: 181 MESTEGLLPCEITFVGILYACS-----HCGMVKEGFE 212
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 36/243 (14%)
Query: 31 VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
V + +H+ ++ G + Y+ N L LY++ G + A KVF
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVF----------------- 46
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
D MP +D+V+WNS+I+G+A NG +AL L+ EM G++P FT
Sbjct: 47 --------------DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 151 SILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
L S + + K+VH +I+ G+ N+ N L+ +Y + G V+ + ++ M
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLT-RNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQFTCSTLMSVCSNLRDLDKGK 266
+ +SW SL+ G + A+ F M E LLP + T ++ CS+ + +G
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 267 QVF 269
+ F
Sbjct: 212 EYF 214
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 38/240 (15%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+LL C ++ K VH + +K+GL + N LDLY+ G + +A +FD++ K
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
NS SW S+I G A NGF +A+ELF M+
Sbjct: 154 NSVSW-------------------------------TSLIVGLAVNGFGKEAIELFKYME 182
Query: 140 GA-GMRPSSFTFSILTSLVSSPCHAKQ--VHGRIIRSGMDLSNVVLG-NSLIAMYGKVGL 195
G+ P TF + S K+ + R +R + + ++ + + G
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 196 VDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
V ++ I +M + +++ W +L+ AC H + LA F +++ +L P+ L+S
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGAC--TVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 223/480 (46%), Gaps = 3/480 (0%)
Query: 152 ILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
+L + S P K++H ++R+G N +L L+ +G + Y+ V M K I
Sbjct: 16 LLRASSSKPKQLKKIHAIVLRTGFSEKNSLL-TQLLENLVVIGDMCYARQVFDEMHKPRI 74
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
WN+L R +L + KMRD + PD+FT ++ S L D G + A
Sbjct: 75 FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAH 134
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
K GF IV++ + ++ K L + LF D + ++ A
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
L F + ++ + V +LS+ +E+G +I+ K + + ++ + + M
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDM 254
Query: 392 YAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
+ K G + A +F E K +++VSW+T+++G A NG L LF + EG+ P+ +T
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTF 314
Query: 452 AAVLLACNYGSFVDEGIKIFFSM--ETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
VL AC++ V+EG + F M + ++P +EHY +V++L ++G+L+EA + ++
Sbjct: 315 LGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKK 374
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESL 569
MP +W +L C +H D+ + + VA ++E P +++L+ Y G+W+ +
Sbjct: 375 MPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCV 434
Query: 570 VRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
+VR M + TK+ S + ++ F H K + ++ GYV
Sbjct: 435 DKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYV 494
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 11/356 (3%)
Query: 77 SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFV 136
S KNS + L+ L+ G + A Q+FD M + WN++ GY N ++L L+
Sbjct: 40 SEKNSLLTQL-LENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYK 98
Query: 137 EMQGAGMRPSSFTFSILTSLVSS----PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
+M+ G+RP FT+ + +S C +H +++ G +V L+ MY K
Sbjct: 99 KMRDLGVRPDEFTYPFVVKAISQLGDFSC-GFALHAHVVKYGFGCLGIV-ATELVMMYMK 156
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
G + + + +M+ D+++WN+ + C + G+ +AL +F KM + D FT ++
Sbjct: 157 FGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSM 216
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDT 312
+S C L L+ G++++ K N IV +A +D+ KC E + LF E + +
Sbjct: 217 LSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNV 276
Query: 313 ALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHAL 372
++MI YA + +AL LF E +RP +LS+ S V G + +L
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336
Query: 373 VPK---LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLA 424
+ + E + +V + + G++++A + ++ D W ++ A
Sbjct: 337 MVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 206/424 (48%), Gaps = 14/424 (3%)
Query: 214 WNSLMWACHRAGHHELALAHFYKM------RDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
WN+++ + H LA + + M A D TCS + C+ Q
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 268 VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDL 327
+ + G +S++ + +D +SK L + +LF E D A ++I+ + +
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
+A+ L+ E IR +E V L + S V+ G I G+ +D V+ S
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH-----GYSNDNVIVSN 245
Query: 388 L-VHMYAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
+ MY+K G +D A +F + T K +V+WNT++ G A +G+ L++F +L G+
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID 505
PD ++ A L AC + V+ G+ +F +M + GV+ +HY VV++LS+AG L+EA D
Sbjct: 306 PDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHD 364
Query: 506 IVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGR 565
I+ +M +W+ +L I+ D+++ E ++EI E +++L+ Y GR
Sbjct: 365 IICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGR 424
Query: 566 WESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXXXXXVWEMET 625
W+ + RVR DME K K+ G S+ K ++ F ++ H ++ +++
Sbjct: 425 WKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRE 484
Query: 626 EGYV 629
+GYV
Sbjct: 485 DGYV 488
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 9/217 (4%)
Query: 88 LKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSS 147
L K+G L +A +LFD MPVRDV SWN++I+G S +S+A+EL+ M+ G+R S
Sbjct: 151 LDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSE 210
Query: 148 FTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI--LT 205
T S K+ G I G NV++ N+ I MY K G VD ++ V T
Sbjct: 211 VTVVAALGACSHLGDVKE--GENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFT 268
Query: 206 MKKIDIISWNSLM--WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLD 263
KK +++WN+++ +A H H L + F K+ D + PD + ++ C + ++
Sbjct: 269 GKK-SVVTWNTMITGFAVHGEAHRALEI--FDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 264 KGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
G VF G N +DL S+ RL ++
Sbjct: 326 YGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREA 362
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 182/417 (43%), Gaps = 52/417 (12%)
Query: 17 YCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDI 76
Y T++ C+S + +K + +HFL G ++L +R L+ A+ F D+
Sbjct: 5 YMETMIQKCVS---FSQIKQLQSHFLTAGHFQSSFLRSRLLERC--------AISPFGDL 53
Query: 77 SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFV 136
S A Q+F +P WN++I G+A + S A +
Sbjct: 54 SF---------------------AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYR 92
Query: 137 EM------QGAGMRPSSFTFSI-LTSLVSSPCHA--KQVHGRIIRSGMDLSNVVLGNSLI 187
M A R + T S L + + C + Q+H +I R G+ ++ +L +L+
Sbjct: 93 SMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLS-ADSLLCTTLL 151
Query: 188 AMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQF 247
Y K G + ++ + M D+ SWN+L+ A+ + +M + +
Sbjct: 152 DAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEV 211
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY-NSIVSSAAIDLFSKCNRLEDSVRLFTE 306
T + CS+L D+ +G+ +F G+ N IVS+AAID++SKC ++ + ++F E
Sbjct: 212 TVVAALGACSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVF-E 265
Query: 307 QDRWDTALCT--SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
Q ++ T +MI+ +A H AL +F I+P + L++ VE
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF-NETKIKDLVSWNTIM 420
G+ + + G E + +V + ++ G + +A I + + I D V W +++
Sbjct: 326 YGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 215/445 (48%), Gaps = 3/445 (0%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
+ +H ++++S + + +G+ L+ Y ++G + + M + D++SWNSL+
Sbjct: 51 RLLHCKVVKS-VSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSG 109
Query: 224 AGHHELALAHFYKMRDAEL--LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
G+ +M +E+ P++ T +++S C ++G+ + K G +
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE 341
V +A I+ + K L S +LF + + +MI + + L E L F ++ R
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRV 229
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
P + +L S V + IH L+ GF + + + L+ +Y+K G ++D+
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 402 LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
+F+E D ++W ++ A +G + F+ ++ G++PD +T +L AC++
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 462 SFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRL 521
V+EG F +M + + P +HY+ +V++L ++G+L++A +++ MP + +W
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 522 ILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCT 581
+L C ++ D Q+ A+ + E EP+ Y++L+ Y G W+ R+R M+QK
Sbjct: 410 LLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469
Query: 582 KEFIGCSWFGMKNHVYTFQSNQLQH 606
GCS+ N ++ F H
Sbjct: 470 VRASGCSYIEHGNKIHKFVVGDWSH 494
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 190/415 (45%), Gaps = 40/415 (9%)
Query: 4 FLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDL 63
FL Q+ ++ + S+L+ S S+ +++H +K + ++G++ + Y L
Sbjct: 20 FLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRL 79
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
GH A K+FD++ ++ SWN S+ISGY+
Sbjct: 80 GHDVCAEKLFDEMPERDLVSWN-------------------------------SLISGYS 108
Query: 124 SNGFSSDALELFVEM--QGAGMRPSSFTF-SILTSLV--SSPCHAKQVHGRIIRSGMDLS 178
G+ E+ M G RP+ TF S++++ V S + +HG +++ G+ L
Sbjct: 109 GRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV-LE 167
Query: 179 NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMR 238
V + N+ I YGK G + S + + +++SWN+++ + G E LA+F R
Sbjct: 168 EVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR 227
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
PDQ T ++ C ++ + + + GF N +++A +DL+SK RLE
Sbjct: 228 RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLE 287
Query: 299 DSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
DS +F E D+ T+M+++YATH G DA+ F L + I P + LL++ S
Sbjct: 288 DSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS 347
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLA--STLVHMYAKFGIIDDALHIFNETKIK 411
VE G + K + D L S +V + + G++ DA + E ++
Sbjct: 348 HSGLVEEGKHYFETMSKR-YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPME 401
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 350 VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
VS L+++ + +E+ +H V K + LV Y + G A +F+E
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKELI--REGMAPDRITLAAVLLACNYGSFVDEG 467
+DLVSWN+++ G + G + ++ ++ G P+ +T +++ AC YG +EG
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 468 IKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+ + +FGV + + K G L + + E +
Sbjct: 154 -RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL 195
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 232/474 (48%), Gaps = 43/474 (9%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIA---MYGKVGLVDYSFSVILTMKKI----------- 209
KQ+H +R+G+D + +L L+ +Y + + S K+
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPH 64
Query: 210 -DIISWNSLMWACHRAGHH----------------ELALAHFYKMRDAELLPDQFTCSTL 252
I+ +N L + R HH L L H R D F C+TL
Sbjct: 65 ESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSG-FESDSFCCTTL 123
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGF-VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD 311
++ + L L ++VF K V+N++++ + + ++ ++ LF R +
Sbjct: 124 ITAYAKLGALCCARRVFDEMSKRDVPVWNAMITG-----YQRRGDMKAAMELFDSMPRKN 178
Query: 312 TALCTSMISSYATHDLGEDALHLFVLTLRE-NIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
T++IS ++ + +AL +F+ ++ +++P V +L + + +E+G ++
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNGKV 429
+ GF + + + + MY+K G+ID A +F E ++L SWN+++ LA +GK
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
L LF +++REG PD +T +LLAC +G V +G ++F SME + P EHY
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 490 VVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQA 549
++++L + G L+EA D+++TMP +W +L C HG++++ E ++ + + EP
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 550 PFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWF---GMKNHVYTFQ 600
P ++++ Y +W+ ++R+RK M+++ + G S+F G+ H +T +
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVE 472
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 144/276 (52%), Gaps = 7/276 (2%)
Query: 34 VKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLK 93
++++H+ F + G + ++ + Y+ LG + A +VFD++S ++ WN + G +
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ-GAGMRPSSFT-FS 151
G + A +LFD MP ++V SW ++ISG++ NG S+AL++F+ M+ ++P+ T S
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 152 ILTSLVS--SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM-KK 208
+L + + +++ G +G N+ + N+ I MY K G++D + + + +
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ 279
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
++ SWNS++ + G H+ AL F +M PD T L+ C + + KG+++
Sbjct: 280 RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQEL 339
Query: 269 FAFCFKVGFVYNSIVS-SAAIDLFSKCNRLEDSVRL 303
F +V + + IDL + +L+++ L
Sbjct: 340 FKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 375
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 195/450 (43%), Gaps = 94/450 (20%)
Query: 31 VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
+N +K +HAH L+ G++ L R L L +L + A K+FD H+NS ++
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLL-LIPNLVY---ARKLFD--HHQNSCTF------ 48
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
+N +I Y + +++ L+ + G+RPS TF
Sbjct: 49 -----------------------LYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTF 85
Query: 151 SILTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
+ + + +S A+ +H + RSG + S+ +LI Y K+G + + V M
Sbjct: 86 NFIFAASASFSSARPLRLLHSQFFRSGFE-SDSFCCTTLITAYAKLGALCCARRVFDEMS 144
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKM------------------------------ 237
K D+ WN+++ R G + A+ F M
Sbjct: 145 KRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLC 204
Query: 238 --RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
+D + P+ T +++ C+NL +L+ G+++ + + GF N V +A I+++SKC
Sbjct: 205 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCG 264
Query: 296 RLEDSVRLFTEQDRWDTALCT--SMISSYATHDLGEDALHLFVLTLRENIRPTE-----Y 348
++ + RLF E LC+ SMI S ATH ++AL LF LRE +P
Sbjct: 265 MIDVAKRLFEELGN-QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGL 323
Query: 349 MVSC-----LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
+++C ++ +F +E ++H + PKL ++ + + G + +A
Sbjct: 324 LLACVHGGMVVKGQELFKSME---EVHKISPKLEH------YGCMIDLLGRVGKLQEAYD 374
Query: 404 IFNETKIK-DLVSWNTIMMGLAYNGKVSVT 432
+ +K D V W T++ +++G V +
Sbjct: 375 LIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 214/475 (45%), Gaps = 45/475 (9%)
Query: 107 MPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL---TSLVSSPCHA 163
M +V +N++ G+ + +LEL+V M + PSS+T+S L +S S +
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGES 890
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
Q H I + G +V + +LI Y G + + V M + D I+W +++ A R
Sbjct: 891 LQAH--IWKFGFGF-HVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
M A L +Q + N
Sbjct: 948 V----------LDMDSANSLANQMS-----------------------------EKNEAT 968
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
S+ I+ + LE + LF + D T+MI Y+ + +A+ +F + E I
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
P E +S ++S+ + +E+G ++H + GF D + S LV MY+K G ++ AL
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
+F K+L WN+I+ GLA +G L +F ++ E + P+ +T +V AC +
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
VDEG +I+ SM ++ + EHY +V + SKAG++ EA++++ M + +W +L
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 524 SVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQ 578
C IH +L + E ++M EP Y +L Y RW + +R M +
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRE 1263
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 42/310 (13%)
Query: 33 FVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW-------- 84
F + + AH K G + + +D YS G I +A KVFD++ ++ +W
Sbjct: 887 FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR 946
Query: 85 -----------------------NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISG 121
N + G + G L A LF+ MPV+D++SW +MI G
Sbjct: 947 RVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKG 1006
Query: 122 YASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGM 175
Y+ N +A+ +F +M G+ P T S +++S+ H K+VH +++G
Sbjct: 1007 YSQNKRYREAIAVFYKMMEEGIIPDEVTMS---TVISACAHLGVLEIGKEVHMYTLQNGF 1063
Query: 176 DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFY 235
L +V +G++L+ MY K G ++ + V + K ++ WNS++ G + AL F
Sbjct: 1064 VL-DVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFA 1122
Query: 236 KMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF-AFCFKVGFVYNSIVSSAAIDLFSKC 294
KM + P+ T ++ + C++ +D+G++++ + V N + LFSK
Sbjct: 1123 KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKA 1182
Query: 295 NRLEDSVRLF 304
+ +++ L
Sbjct: 1183 GLIYEALELI 1192
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
ST++ C + K VH + L+ G Y+G+ +D+YS G + AL VF ++
Sbjct: 1036 STVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK 1095
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
KN WN ++GL A++GF+ +AL++F +M
Sbjct: 1096 KNLFCWNSIIEGL-------------------------------AAHGFAQEALKMFAKM 1124
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVH--GRIIRSGMD----LSNVVLGNSLIAMYGK 192
+ ++P++ TF S+ ++ HA V RI RS +D +SNV ++ ++ K
Sbjct: 1125 EMESVKPNAVTF---VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSK 1181
Query: 193 VGLVDYSFSVILTMK-KIDIISWNSLMWAC 221
GL+ + +I M+ + + + W +L+ C
Sbjct: 1182 AGLIYEALELIGNMEFEPNAVIWGALLDGC 1211
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 128/324 (39%), Gaps = 80/324 (24%)
Query: 296 RLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
RL+ +V T+ + + ++ + T +L L+V LR+++ P+ Y S L+
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 879
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS 415
+ S G + A + K GF + +TL+ Y+ G I +A +F+E +D ++
Sbjct: 880 ASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIA 937
Query: 416 WNTIM----------------------------------MGLAYNGKVSVTLDLFKEL-- 439
W T++ MGL G + LF ++
Sbjct: 938 WTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGL---GNLEQAESLFNQMPV 994
Query: 440 ------------------IREGMA-----------PDRITLAAVLLACNYGSFVDEGIKI 470
RE +A PD +T++ V+ AC + ++ G ++
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 1054
Query: 471 -FFSMETEF--GVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCV 527
++++ F V G + +V+M SK G L+ A+ + +P L W I+
Sbjct: 1055 HMYTLQNGFVLDVYIG----SALVDMYSKCGSLERALLVFFNLPKK-NLFCWNSIIEGLA 1109
Query: 528 IHGDLQ-VIETVAKEIMER-EPQA 549
HG Q ++ AK ME +P A
Sbjct: 1110 AHGFAQEALKMFAKMEMESVKPNA 1133
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 231/470 (49%), Gaps = 34/470 (7%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAM-YGKVGLVDYSFSVILTMKKIDIISWNSLMWACH 222
+Q+H ++ G + ++G+ + A+ +DY+ ++ +K + + NS++ A
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 223 RAGHHELALAHFYKMRDA--ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYN 280
++ E + + ++ + +L PD +T + L+ C+ LR + G QV + GF +
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 281 SIVSSAAIDLFSK----------------------------CNRLEDSV---RLFTEQDR 309
V + I L+++ C R D V +LF
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
Query: 310 WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
D +MIS YA +AL++F L E ++ + +LS+ + ++ G
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKV 429
H+ + + + LA+TLV +YAK G ++ A+ +F + K++ +W++ + GLA NG
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
L+LF + ++G+ P+ +T +VL C+ FVDEG + F SM EFG++P EHY
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGC 382
Query: 490 VVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQA 549
+V++ ++AG L++A+ I++ MP +W +L ++ +L++ +K+++E E
Sbjct: 383 LVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETAN 442
Query: 550 PFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
Y++L+ Y W+++ VR+ M+ K ++ GCS + V+ F
Sbjct: 443 HGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEF 492
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 139/274 (50%), Gaps = 5/274 (1%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
VH ++ G + ++ + LY++LG ++ KVF+ I + + + G
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT-FSILTS 155
+ A +LF+GMP RD ++WN+MISGYA G S +AL +F MQ G++ + S+L++
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 156 L--VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
+ + + H I R+ + ++ V L +L+ +Y K G ++ + V M++ ++ +
Sbjct: 250 CTQLGALDQGRWAHSYIERNKIKIT-VRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF-AFC 272
W+S + G E L F M+ + P+ T +++ CS + +D+G++ F +
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
+ G +DL+++ RLED+V + +
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ 402
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 182/345 (52%), Gaps = 17/345 (4%)
Query: 262 LDKGKQVFAFCFKVGFVYNS-IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMIS 320
L G+ V K+GF+Y S ++ + + ++K L + ++F E + +MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 321 SYATH-DLGE-DALHLFVLTLR-----ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
Y +H D G +A VL R +RPT+ + C+LS+ S +E+G +H +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 374 PKLGF--ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSV 431
KLGF E D + + LV MY+K G +++A +F K+K++ +W ++ GLA NG+ +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 432 TLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVV 491
T +L + G+ P+ IT ++L A + V+EGI++F SM+T FGV P EHY +V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 492 EMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPF 551
++L KAG ++EA + MP + R + + C I+G+ + E + K ++E E +
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 552 -------PYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
Y+ L+ G+W + ++RK+M+++ K G S+
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSF 471
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 18/255 (7%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYAS-----NGFSSDALELFVEMQ--GAGMRP 145
K+G L A ++FD MP R V+WN+MI GY S N + A+ LF G+G+RP
Sbjct: 159 KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRP 218
Query: 146 SSFTFSILTSLVSSPCH---AKQVHGRIIRSGMDLS-NVVLGNSLIAMYGKVGLVDYSFS 201
+ T + S +S VHG I + G +V +G +L+ MY K G ++ +FS
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFS 278
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
V MK ++ +W S+ G +M ++ + P++ T ++L+S ++
Sbjct: 279 VFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 262 LDKGKQVFAFCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSM 318
+++G ++F K F ++ +DL K R++++ + + D L S+
Sbjct: 339 VEEGIELFK-SMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Query: 319 ISS---YATHDLGED 330
++ Y +GE+
Sbjct: 398 CNACSIYGETVMGEE 412
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 43/195 (22%)
Query: 36 IVHAHFLKLGLNTYT--YLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLK 93
+VH + KLG ++G +D+YS G +N+A VF+ + KN
Sbjct: 241 LVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN------------- 287
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
V +W SM +G A NG ++ L M +G++P+ TF
Sbjct: 288 ------------------VFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITF--- 326
Query: 154 TSLVSSPCHAKQVHGRI-----IRSGMDLSNVVLG-NSLIAMYGKVGLVDYSFSVILTMK 207
TSL+S+ H V I +++ ++ V+ ++ + GK G + ++ IL M
Sbjct: 327 TSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
Query: 208 -KIDIISWNSLMWAC 221
K D I SL AC
Sbjct: 387 IKPDAILLRSLCNAC 401
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 248/522 (47%), Gaps = 42/522 (8%)
Query: 102 QLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSL--VS 158
++ G D SW ++ + + + ++++++M +G+ PSS S+L + +
Sbjct: 59 RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME 118
Query: 159 SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
+ K +H + +++G+ V + L+ +Y ++G ++ + + + + +SWNSL+
Sbjct: 119 NMVDGKPIHAQALKNGL-CGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCST------LMSVCS--------------- 257
+G + A F K+ + + + S+ + + CS
Sbjct: 178 HGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI 237
Query: 258 ------NLRDLDKGKQVF-AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
N R++ + F A K G + +++S ++K ++ + LF +
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISG-----YTKLGDVQSAEELFRLMSKK 292
Query: 311 DTALCTSMISSYATHDLGEDALHLFVLTLREN--IRPTEYMVSCLLSSFSIFLPVEVGIQ 368
D + +MI+ Y + +DAL LF L N I+P E +S ++S+ S G
Sbjct: 293 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGK 428
+ + + + G + D +L+++L+ +Y K G A +F+ KD VS++ ++MG NG
Sbjct: 353 VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGM 412
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYT 488
+ LF +I + + P+ +T +L A ++ V EG K F SM+ + ++P +HY
Sbjct: 413 ATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYG 471
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQ 548
+V+ML +AG L+EA +++++MP +W +L +H +++ E ++ E
Sbjct: 472 IMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETD 531
Query: 549 APFPYLV-LAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
P YL LA Y +GRW+ VR +++K + +GCSW
Sbjct: 532 -PTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSW 572
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 201/415 (48%), Gaps = 11/415 (2%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+++L C +++ K +HA LK GL Y+ + LYS LG+I A K FDDI+
Sbjct: 108 TSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE 167
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
KN+ SWN L G L+SG+L A ++FD +P +D VSWN +IS YA G +A LF M
Sbjct: 168 KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVH-GRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
P+S+ L+ + +++ R M N V ++I+ Y K+G V
Sbjct: 228 PLKS--PASWNI-----LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQ 280
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM--RDAELLPDQFTCSTLMSV 255
+ + M K D + +++++ + G + AL F +M R++ + PD+ T S+++S
Sbjct: 281 SAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSA 340
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
S L + G V ++ + G + ++S++ IDL+ K + ++F+ ++ DT
Sbjct: 341 NSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSY 400
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
++MI + + +A LF + + I P + LLS++S V+ G + +
Sbjct: 401 SAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD 460
Query: 376 LGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNGKV 429
E A +V M + G +++A + ++ W +++ + V
Sbjct: 461 HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNV 515
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 230/482 (47%), Gaps = 39/482 (8%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAM------YGK-VGLVDYSFSVILTMKKIDIISWNS 216
K +HG ++R+ + +S+V + + L+A+ + K L+ Y++ + ++ ++ +N
Sbjct: 29 KIIHGFLLRTHL-ISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNL 87
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
L+ A + +M + + PD T L+ S + + G+Q + + G
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 277 F-----VYNSIVS--------SAAIDLFS------------------KCNRLEDSVRLFT 305
F V NS+V +AA +F KC +E++ +F
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 306 EQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEV 365
E + + MI+ YA ++ E A+ LF RE + E ++ ++SS + +E
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 366 GIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAY 425
G + + V K + +L + LV M+ + G I+ A+H+F D +SW++I+ GLA
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 426 NGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEE 485
+G + F ++I G P +T AVL AC++G V++G++I+ +M+ + G++P E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 486 HYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMER 545
HY +V+ML +AG L EA + + M + +L C I+ + +V E V +++
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 546 EPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQ 605
+P+ Y++L+ Y G+W+ + +R M++K K+ G S + + F Q
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQ 507
Query: 606 HY 607
+
Sbjct: 508 KH 509
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 129/238 (54%), Gaps = 10/238 (4%)
Query: 38 HAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQL 97
H+ ++ G Y+ N + +Y++ G I A ++F + ++ SW + G K G +
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 98 GNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLV 157
NA ++FD MP R++ +W+ MI+GYA N A++LF M+ G+ + +++ S++
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE---TVMVSVI 256
Query: 158 SSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
SS H ++ + +++S M + N++LG +L+ M+ + G ++ + V + + D
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+SW+S++ GH A+ +F +M +P T + ++S CS+ ++KG +++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 213/434 (49%), Gaps = 11/434 (2%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC-- 221
KQ+H +II G+ L + L+ + V L Y+ S++ + + +N+L+ +
Sbjct: 26 KQIHAQIITIGLSHHTYPL-SKLLHLSSTVCL-SYALSILRQIPNPSVFLYNTLISSIVS 83
Query: 222 -HRAGHHELALAHFYKM---RDAELLPDQFTCSTLMSVCS-NLRDLDKGKQVFAFCFKV- 275
H + LA + + ++ R + P++FT +L + + G+ + A K
Sbjct: 84 NHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFL 143
Query: 276 -GFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
++ V +A + ++ C +L ++ LF D A +++++YA + + +
Sbjct: 144 EPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEV 203
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK 394
+L +R +RP E + L+ S + G+ H V K + + ++L+ +Y+K
Sbjct: 204 LLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSK 263
Query: 395 FGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAV 454
G + A +F+E +D+ +N ++ GLA +G ++L+K LI +G+ PD T
Sbjct: 264 CGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVT 323
Query: 455 LLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTI 514
+ AC++ VDEG++IF SM+ +G++P EHY +V++L ++G L+EA + ++ MP
Sbjct: 324 ISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKP 383
Query: 515 TLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRK 574
+WR L HGD + E K ++ E + Y++L+ Y + RW + + R+
Sbjct: 384 NATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRE 443
Query: 575 DMEQKCTKEFIGCS 588
M+ + G S
Sbjct: 444 LMKDHRVNKSPGIS 457
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 22/258 (8%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYA-SNGFSSD--ALELFVEMQGAGMRPSSFTFS 151
G+L A LF+ + D+ +WN++++ YA S SD L LF+ MQ +RP+ +
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELS-- 218
Query: 152 ILTSLVSSPCHAKQ------VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
L +L+ S + + H ++++ + L N +G SLI +Y K G + ++ V
Sbjct: 219 -LVALIKSCANLGEFVRGVWAHVYVLKNNLTL-NQFVGTSLIDLYSKCGCLSFARKVFDE 276
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
M + D+ +N+++ G + + + + L+PD T +S CS+ +D+G
Sbjct: 277 MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Query: 266 KQVFAFCFKVGFVYNSIVSSAA-IDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISSYA 323
Q+F V + + +DL + RLE++ + + + L S + S
Sbjct: 337 LQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQ 396
Query: 324 TH---DLGEDAL-HLFVL 337
TH + GE AL HL L
Sbjct: 397 THGDFERGEIALKHLLGL 414
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 56/219 (25%)
Query: 33 FVKIV--HAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKG 90
FV+ V H + LK L ++G +DLYS G ++ A KVFD+
Sbjct: 232 FVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDE--------------- 276
Query: 91 LLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
M RDV +N+MI G A +GF + +EL+ + G+ P S TF
Sbjct: 277 ----------------MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATF 320
Query: 151 SILTSLVSSPCHAKQVHGRIIRSGMDLSN---VVLG--------NSLIAMYGKVGLVDYS 199
+ S S H ++ G+ + N V G L+ + G+ G ++ +
Sbjct: 321 VVTISACS--------HSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 200 FSVILTMK-KIDIISWNSLMWACHRAG---HHELALAHF 234
I M K + W S + + G E+AL H
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHL 411
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 212/447 (47%), Gaps = 5/447 (1%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
+QVH +I +G S +L LI + + Y+ + L++ D +NS++ + +
Sbjct: 26 QQVHAHLIVTGYGRSRSLL-TKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
+A++ +M + + P +T ++++ C++L L GK V GF ++ V
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI 343
+A + +SKC +E + ++F S++S + + L ++A+ +F
Sbjct: 145 QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGF 204
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
P LLS+ + V +G +H + G + + L + L+++Y++ G + A
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE-GMAPDRITLAAVLLACNYGS 462
+F++ K ++ +W ++ +G ++LF ++ + G P+ +T AVL AC +
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324
Query: 463 FVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT---ITLDMW 519
V+EG ++ M + + PG EH+ +V+ML +AG L EA + + T +W
Sbjct: 325 LVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALW 384
Query: 520 RLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQK 579
+L C +H + + +AK ++ EP P +++L+ Y + G+ + + +R M +
Sbjct: 385 TAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRN 444
Query: 580 CTKEFIGCSWFGMKNHVYTFQSNQLQH 606
++ +G S ++N Y F H
Sbjct: 445 NLRKQVGYSVIEVENKTYMFSMGDESH 471
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 131/248 (52%), Gaps = 13/248 (5%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-S 151
K G + A Q+FD MP + +V+WNS++SG+ NG + +A+++F +M+ +G P S TF S
Sbjct: 154 KCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVS 213
Query: 152 ILTSLVSSPCHA--KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
+L++ + + VH II G+DL NV LG +LI +Y + G V + V MK+
Sbjct: 214 LLSACAQTGAVSLGSWVHQYIISEGLDL-NVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMR-DAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
++ +W +++ A G+ + A+ F KM D +P+ T ++S C++ +++G+ V
Sbjct: 273 NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV 332
Query: 269 FAFCFKVGFVYNSIVSSAA-IDLFSKCNRLEDSVRLFTEQDRWDT----ALCTSMISSYA 323
+ K + + +D+ + L+++ + + D AL T+M+ +
Sbjct: 333 YKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACK 392
Query: 324 TH---DLG 328
H DLG
Sbjct: 393 MHRNYDLG 400
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 165/359 (45%), Gaps = 22/359 (6%)
Query: 103 LFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSL--VSS 159
LF +P+ D +NS+I + + + M + + PS++TF S++ S +S+
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 160 PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMW 219
K VH + SG L V +L+ Y K G ++ + V M + I++WNSL+
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQA-ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 220 ACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY 279
+ G + A+ FY+MR++ PD T +L+S C+ + G V + G
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTL 339
N + +A I+L+S+C + + +F + + A T+MIS+Y TH G+ A+ LF +
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN-KM 300
Query: 340 RENIRPTEYMVS--CLLSSFSIFLPVEVGIQIHALVPK-----LGFESDAVLASTLVHMY 392
++ P V+ +LS+ + VE G ++ + K G E +V M
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC----MVDML 356
Query: 393 AKFGIIDDA---LHIFNET-KIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
+ G +D+A +H + T K W ++ + + +++ K LI + PD
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI--ALEPD 413
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 45/223 (20%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+LL C +V+ VH + + GL+ LG ++LYS G + A +VFD +
Sbjct: 213 SLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ 139
N +W +MIS Y ++G+ A+ELF +M+
Sbjct: 273 NVAAW-------------------------------TAMISAYGTHGYGQQAVELFNKME 301
Query: 140 -GAGMRPSSFTFSILTSLVSSPCHA------KQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
G P++ TF +++S+ HA + V+ R+ +S + V ++ M G+
Sbjct: 302 DDCGPIPNNVTF---VAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 193 VGLVDYSFSVI----LTMKKIDIISWNSLMWACHRAGHHELAL 231
G +D ++ I T K W +++ AC +++L +
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGV 401
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 223/492 (45%), Gaps = 36/492 (7%)
Query: 151 SILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSL-IAMYGKVGLVDYSFSVILTMKKI 209
SIL S ++H +I G+ + +L + G VDY++ + +
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
WN ++ + + E +++ + +M LLPD T LM S L + G +
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 270 AFCFKVG-----FVYNSIVS--------------------------SAAIDLFSKCNRLE 298
K G F+ N+++ ++ +D ++K +
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 299 DSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLR-ENIRPTEYMVSCLLSSF 357
+ +F E D +SMI Y AL +F +R + + E + ++ +
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK--DLVS 415
+ + G +H + + +L ++L+ MYAK G I DA +F +K D +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 416 WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSME 475
WN I+ GLA +G + +L LF ++ + PD IT +L AC++G V E F S++
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 476 TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVI 535
E G +P EHY +V++LS+AG++K+A D + MP T M +L+ C+ HG+L++
Sbjct: 372 -ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 536 ETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNH 595
ETV K+++E +P Y+ LA Y + ++ + +R+ ME+K K+ G S +
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGT 490
Query: 596 VYTFQSNQLQHY 607
+ F ++ H+
Sbjct: 491 RHRFIAHDKTHF 502
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 11/278 (3%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+H +K GL ++ N + +Y A K+FD++ HKN +WN L KSG
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGD 189
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+ +A +FD M RDVV+W+SMI GY G + ALE+F +M G S + S+
Sbjct: 190 VVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG--SSKANEVTMVSV 247
Query: 157 VSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL--TMKK 208
+ + H K VH I+ + L+ V+L SLI MY K G + ++SV ++K+
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLT-VILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D + WN+++ G +L F+KMR++++ PD+ T L++ CS+ + +
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHF 366
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
F + G S + +D+ S+ ++D+ +E
Sbjct: 367 FKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISE 404
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 25 CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTS- 83
C ++N K VH + L + L L +D+Y+ G I DA VF S K + +
Sbjct: 251 CAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 84 -WNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEM 138
WN + GL G + + QLF M D +++ +++ + G +A F +
Sbjct: 311 MWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLG 183
+ +G P S ++ + ++S K H I + + +LG
Sbjct: 371 KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 415
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 237/509 (46%), Gaps = 44/509 (8%)
Query: 163 AKQVHGRIIRSGMDLS-NVVLGNSLIAMYGKVGLVDYSFSVI--LTMKKIDIISWNSLMW 219
K++H + SG+ + L N+L Y G + + + + + + D + W +L+
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 220 ACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY 279
+ R G ++ F +MR + D + L VC+ L DL +Q K+G +
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQD---------------RWD------------- 311
+ V +A +D++ KC + + R+F E + +W+
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 312 ---TALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSC-LLSSFSIFLPVEVGI 367
T M++ Y + L L + ++ C +LS+ + + VG
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 368 QIHALVPK----LGFES---DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIM 420
+H K +G E+ D ++ + LV MYAK G ID ++++F + +++V+WN +
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGV 480
GLA +GK + +D+F ++IRE + PD +T AVL AC++ VDEG + F S+ +G+
Sbjct: 325 SGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGL 382
Query: 481 KPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAK 540
+P +HY +V++L +AG+++EA ++ MP + +L C +HG +++ E + +
Sbjct: 383 EPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKR 442
Query: 541 EIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQ 600
E+++ P ++++ Y GR + +R + ++ ++ G S + + V+ F
Sbjct: 443 ELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFS 502
Query: 601 SNQLQHYGGKDXXXXXXXXVWEMETEGYV 629
S H K+ + + + GYV
Sbjct: 503 SGDRSHPRTKEIYLKLNEVIERIRSAGYV 531
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 162/342 (47%), Gaps = 22/342 (6%)
Query: 25 CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW 84
C + + F + H +K+G+ T + N +D+Y G +++ ++F+++ K+ SW
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 85 NICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ---GA 141
+ L ++K L ++F MP R+ V+W M++GY GF+ + LEL EM G
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 142 GMRPSSFTFSILTSLVSSPCHA------KQVHGRIIRSGMDLS------NVVLGNSLIAM 189
G+ F L S++S+ + + VH ++ M + +V++G +L+ M
Sbjct: 241 GL-----NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDM 295
Query: 190 YGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTC 249
Y K G +D S +V M+K ++++WN+L G + + F +M E+ PD T
Sbjct: 296 YAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTF 354
Query: 250 STLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD- 308
+ ++S CS+ +D+G + F G + +DL + +E++ L E
Sbjct: 355 TAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPV 414
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMV 350
+ + S++ S + H E A + ++ + TEY +
Sbjct: 415 PPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQI 456
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 184/402 (45%), Gaps = 57/402 (14%)
Query: 94 SGQLGNACQLFDGMPV--RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
SG++ A +LFD +P+ +D V W +++S ++ G ++++LFVEM+ + +
Sbjct: 56 SGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVV 115
Query: 152 ILTSLVSS---PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
L + + A+Q HG ++ G+ L++V + N+L+ MYGK GLV + +++
Sbjct: 116 CLFGVCAKLEDLGFAQQGHGVAVKMGV-LTSVKVCNALMDMYGKCGLVSEVKRIFEELEE 174
Query: 209 IDIISW--------------------------NSLMWACHRAGHHELALAHFYKMRDAEL 242
++SW N++ W AG+ L + EL
Sbjct: 175 KSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGY----LGAGFTREVLEL 230
Query: 243 LPDQ-FTCS---------TLMSVCSNLRDLDKGKQVFAFCFKVGFV------YNSI-VSS 285
L + F C +++S C+ +L G+ V + K + Y+ + V +
Sbjct: 231 LAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGT 290
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP 345
A +D+++KC ++ S+ +F + + ++ S A H G + +F +RE ++P
Sbjct: 291 ALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKP 349
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
+ + +LS+ S V+ G + + G E + +V + + G+I++A +
Sbjct: 350 DDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILM 409
Query: 406 NETKI-KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
E + + V +++ + +GKV + + +ELI+ M+P
Sbjct: 410 REMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ--MSP 449
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 206/419 (49%), Gaps = 10/419 (2%)
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFY---KMRDAELLPDQFTCSTLMS 254
Y+ S+ +++ + +++++ C R+ L L +F K + ++ P T L+
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 255 VCSNLRDLDKGKQVFAFCFKVG-FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
C GKQ+ + K G F+ +S V + + ++ + L D+ ++F E + D
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+++ Y LG + L +F L + + P E+ V+ L++ + + G IH V
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 374 PKLGF-ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVT 432
K + ESD + + LV MYAK G I+ A+ +F + +++ SW ++ G A G
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 433 LDLFKELIRE-GMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVV 491
+ + L RE G+ PD + L VL AC +G F++EG + +ME + + P EHY+ +V
Sbjct: 305 MTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIV 364
Query: 492 EMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREP---- 547
+++ +AG L +A++++E MP +W +L+ C H ++++ E K +++ E
Sbjct: 365 DLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVE 424
Query: 548 QAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
+ + L+ Y + R +VR +EQ+ ++ G S + +V F S + H
Sbjct: 425 EEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSH 483
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 99 NACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL-- 156
+A ++FD +P DVV W+ +++GY G S+ LE+F EM G+ P FS+ T+L
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDE--FSVTTALTA 227
Query: 157 ---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS 213
V + K +H + + S+V +G +L+ MY K G ++ + V + + ++ S
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS 287
Query: 214 WNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA-F 271
W +L+ G+ + A+ ++ R+ + PD +++ C++ L++G+ +
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA-LCTSMISSYATH---DL 327
+ S +DL + RL+D++ L + A + ++++ TH +L
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 328 GEDALHLFVLTLRENIRPTE 347
GE A+ + + N+ E
Sbjct: 408 GELAVKNLLDLEKGNVEEEE 427
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 205/421 (48%), Gaps = 14/421 (3%)
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFY---KMRDAELLPDQFTCSTLMS 254
Y+ S+ +++ + +++++ C R+ L L +F K + ++ P T L+
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 255 VCSNLRDLDKGKQVFAFCFKVG-FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA 313
C GKQ+ + K G F+ + V + + ++ + L D+ ++F E + D
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+++ Y LG + L +F L I P E+ V+ L++ + + G IH V
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 374 PKLGF-ESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLA---YNGKV 429
K + ESD + + LV MYAK G I+ A+ +F + +++ SW ++ G A Y K
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
+ LD + +G+ PD + L VL AC +G F++EG + +ME +G+ P EHY+
Sbjct: 305 TTCLDRIER--EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSC 362
Query: 490 VVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREP-- 547
+V+++ +AG L +A+D++E MP +W +L+ C H ++++ E + +++ E
Sbjct: 363 IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGN 422
Query: 548 --QAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQ 605
+ + L+ Y + R +VR +EQ+ ++ G S + V F S +
Sbjct: 423 VEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVS 482
Query: 606 H 606
H
Sbjct: 483 H 483
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
L +A ++FD +P DVV W+ +++GY G S+ LE+F EM G+ P FS+ T+L
Sbjct: 168 LFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDE--FSVTTAL 225
Query: 157 -----VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
V + K +H + + S+V +G +L+ MY K G ++ + V + + ++
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNV 285
Query: 212 ISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
SW +L+ G+ + A ++ R+ + PD +++ C++ L++G+ +
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 271 -FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA-LCTSMISSYATH--- 325
+ G S +DL + RL+D++ L + A + ++++ TH
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 326 DLGEDALHLFVLTLRENIRPTE 347
+LGE A+ + + N+ E
Sbjct: 406 ELGELAVQNLLDLEKGNVEEEE 427
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 213/456 (46%), Gaps = 9/456 (1%)
Query: 152 ILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
I L SS H Q+HG+I S + + ++ + L+ + D +F+ L + D
Sbjct: 18 IFLKLCSSIKHLLQIHGQIHLSSLQNDSFII-SELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 212 I--SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+WN L + ++ + +M+ + P++ T L+ C++ L G+Q+
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
K GF ++ V + I L+ C + D+ ++F E + S++++ +
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLN 196
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
F + + P E + LLS+ L + G +H+ V E + L + LV
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALV 254
Query: 390 HMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG-MAPDR 448
MYAK G ++ A +F K++ +W+ +++GLA G L LF ++++E + P+
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
+T VL AC++ VD+G K F ME +KP HY +V++L +AG L EA D ++
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 509 TMPYTITLDMWRLILSVCVIHGDLQ---VIETVAKEIMEREPQAPFPYLVLAQAYQMMGR 565
MP+ +WR +LS C IH D + E V K ++E EP+ +++A +
Sbjct: 375 KMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARM 434
Query: 566 WESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQS 601
W VR+ M++ K+ G S + + F S
Sbjct: 435 WAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFS 470
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 177/415 (42%), Gaps = 61/415 (14%)
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSS---PCHAKQVHGRI 170
+WN + GY+S+ +++ ++ EM+ G++P+ TF L +S +Q+ +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 171 IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELA 230
++ G D +V +GN+LI +YG + V M + +++SWNS+M A G L
Sbjct: 140 LKHGFDF-DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
F +M PD+ T L+S C +L GK V + N + +A +D+
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 291 FSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRE-NIRPTEYM 349
++K LE + +F + ++MI A + E+AL LF ++E ++RP
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP---- 312
Query: 350 VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNET- 408
++ FL V + G++DD F+E
Sbjct: 313 ------NYVTFLGVLCAC-------------------------SHTGLVDDGYKYFHEME 341
Query: 409 ---KIKD-LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACN-YGSF 463
KIK ++ + ++ L G+++ D K++ E PD + +L AC+ +
Sbjct: 342 KIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFE---PDAVVWRTLLSACSIHHDE 398
Query: 464 VDEGI-----KIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
DEGI K +E + + G + V ++A M EA ++ M T
Sbjct: 399 DDEGIGEKVKKRLIELEPK---RSG--NLVIVANRFAEARMWAEAAEVRRVMKET 448
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
LL C S + + + LK G + Y+GN + LY +DA KVFD+++
Sbjct: 119 LLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTE-- 176
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
R+VVSWNS+++ NG + E F EM G
Sbjct: 177 -----------------------------RNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 141 AGMRPSSFTFSILTSLVSSPCH-AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYS 199
P T +L S K VH +++ ++L N LG +L+ MY K G ++Y+
Sbjct: 208 KRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELEL-NCRLGTALVDMYAKSGGLEYA 266
Query: 200 FSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK-MRDAELLPDQFTCSTLMSVCSN 258
V M ++ +W++++ + G E AL F K M+++ + P+ T ++ CS+
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 259 LRDLDKGKQVFAFCFKVGFVYNSIVS-SAAIDLFSKCNRLEDS 300
+D G + F K+ + ++ A +D+ + RL ++
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEA 369
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 192/399 (48%), Gaps = 41/399 (10%)
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
DI+ WN+++ +G+ E+ M +A L DQ C +MS
Sbjct: 89 DIVLWNTMI-----SGYIEMG-----NMLEARSLFDQMPCRDVMS--------------- 123
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
+N+++ ++ +E R+F + + +I YA +
Sbjct: 124 ---------WNTVLEG-----YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVS 169
Query: 330 DALHLFVLTLRE-NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES-DAVLAST 387
+ L F + E ++ P + ++ +LS+ + + G +H LG+ D + +
Sbjct: 170 EVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNA 229
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
L+ MY K G I+ A+ +F K +DL+SWNT++ GLA +G + L+LF E+ G++PD
Sbjct: 230 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPD 289
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
++T VL AC + V++G+ F SM T+F + P EH VV++LS+AG L +A++ +
Sbjct: 290 KVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFI 349
Query: 508 ETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWE 567
MP +W +L ++ + + E +E+++ EP+ P +++L+ Y GR++
Sbjct: 350 NKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFD 409
Query: 568 SLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
R++ M K+ G SW + + F S+ +H
Sbjct: 410 DAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKH 448
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 13/296 (4%)
Query: 52 LGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRD 111
L N + Y ++G++ +A +FD + ++ SWN L+G G + ++FD MP R+
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAG-MRPSSFTFSILTSLVSSPC---HAKQVH 167
V SWN +I GYA NG S+ L F M G + P+ T +++ S + K VH
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHH 227
G + +V + N+LI MYGK G ++ + V +K+ D+ISWN+++ GH
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 228 ELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV-SSA 286
AL F++M+++ + PD+ T ++ C ++ ++ G F F + I
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 287 AIDLFSKCNRLEDSVRLFTEQDR------WDTALCTSMISSYATHDLGEDALHLFV 336
+DL S+ L +V + W T L S + Y D+GE AL +
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKV--YKKVDIGEVALEELI 385
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 174/412 (42%), Gaps = 50/412 (12%)
Query: 36 IVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSG 95
I HA LN G CL +G I A KVF ++ KN W + G L +
Sbjct: 19 ITHAKCSTESLNQMFLFGMLCL-----MGVIASANKVFCEMVEKNVVLWTSMINGYLLNK 73
Query: 96 QLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS 155
L +A + FD P RD+V WN+MISGY G +A LF +M
Sbjct: 74 DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM----------------- 116
Query: 156 LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWN 215
PC +V+ N+++ Y +G ++ V M + ++ SWN
Sbjct: 117 ----PCR----------------DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 216 SLMWACHRAGHHELALAHFYKMRD-AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
L+ + G L F +M D ++P+ T + ++S C+ L D GK V +
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGET 216
Query: 275 VGFVYNSI---VSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
+G YN + V +A ID++ KC +E ++ +F R D +MI+ A H G +A
Sbjct: 217 LG--YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLGFESDAVLASTLVH 390
L+LF I P + +L + VE G+ +++ + +V
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVD 334
Query: 391 MYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
+ ++ G + A+ N+ +K D V W T++ KV + +ELI+
Sbjct: 335 LLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIK 386
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 110/238 (46%), Gaps = 26/238 (10%)
Query: 302 RLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
++F E + L TSMI+ Y + A F L+ +I M+S
Sbjct: 49 KVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY-------- 100
Query: 362 PVEVG--IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTI 419
+E+G ++ +L ++ D + +T++ YA G ++ +F++ +++ SWN +
Sbjct: 101 -IEMGNMLEARSLFDQMPCR-DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGL 158
Query: 420 MMGLAYNGKVSVTLDLFKELIREG-MAPDRITLAAVLLAC------NYGSFVDEGIKIFF 472
+ G A NG+VS L FK ++ EG + P+ T+ VL AC ++G +V + +
Sbjct: 159 IKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLG 218
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHG 530
+ + VK +++M K G ++ A+++ + + L W +++ HG
Sbjct: 219 YNKVDVNVK------NALIDMYGKCGAIEIAMEVFKGIKRR-DLISWNTMINGLAAHG 269
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 173/347 (49%), Gaps = 10/347 (2%)
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSV 301
LL D FT +TL+ V S + +D Q+F + V +++ ID K + +
Sbjct: 148 LLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL----IDGLVKAREIVRAR 203
Query: 302 RLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
LF D S+IS YA + +A+ LF + ++P + LS+ +
Sbjct: 204 ELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSG 263
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMM 421
+ G IH + D+ LA+ LV YAK G ID A+ IF K L +WN ++
Sbjct: 264 DWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMIT 323
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVK 481
GLA +G +T+D F++++ G+ PD +T +VL+ C++ VDE +F M + + V
Sbjct: 324 GLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN 383
Query: 482 PGEEHYTYVVEMLSKAGMLKEAIDIVETMPY----TITLDMWRLILSVCVIHGDLQVIET 537
+HY + ++L +AG+++EA +++E MP L W +L C IHG++++ E
Sbjct: 384 REMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
Query: 538 VAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRK--DMEQKCTK 582
A + P+ Y V+ + Y RWE +V+VR+ D ++K K
Sbjct: 444 AANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKK 490
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 135/250 (54%), Gaps = 6/250 (2%)
Query: 25 CLSQKS--VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNST 82
C ++K+ + VK +H L+ GL + + N + +YS + I+ AL++FD+ ++
Sbjct: 125 CAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVV 184
Query: 83 SWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAG 142
++N+ + GL+K+ ++ A +LFD MP+RD+VSWNS+ISGYA +A++LF EM G
Sbjct: 185 TYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALG 244
Query: 143 MRPSSFTF-SILTSLVSSP--CHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYS 199
++P + S L++ S K +H R + + + L L+ Y K G +D +
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS-FLATGLVDFYAKCGFIDTA 303
Query: 200 FSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNL 259
+ + +WN+++ G+ EL + +F KM + + PD T +++ CS+
Sbjct: 304 MEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHS 363
Query: 260 RDLDKGKQVF 269
+D+ + +F
Sbjct: 364 GLVDEARNLF 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 45/253 (17%)
Query: 133 ELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ---------VHGRIIRSGMDLSNVVLG 183
FVEM+ + P TF V C AK+ +H + +R G+ LS++
Sbjct: 101 RFFVEMRRRSVPPDFHTFP----FVFKACAAKKNGDLTLVKTLHCQALRFGL-LSDLFTL 155
Query: 184 NSLIAMYGKVGLVD--------------YSFSVIL-----------------TMKKIDII 212
N+LI +Y + +D +++V++ +M D++
Sbjct: 156 NTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLV 215
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
SWNSL+ + H A+ F +M L PD + +S C+ D KGK + +
Sbjct: 216 SWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYT 275
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDAL 332
+ +S +++ +D ++KC ++ ++ +F +MI+ A H GE +
Sbjct: 276 KRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 333 HLFVLTLRENIRP 345
F + I+P
Sbjct: 336 DYFRKMVSSGIKP 348
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 186/404 (46%), Gaps = 38/404 (9%)
Query: 234 FYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK 293
+ +MR+ + PD T L+ N L G++ A G + V ++ ++++S
Sbjct: 50 YLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSS 109
Query: 294 CNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENI---------- 343
C L + R+F + D S++++YA L +DA LF N+
Sbjct: 110 CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGY 169
Query: 344 --------------------------RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG 377
RP E+ +S +LS+ +E G +HA + K
Sbjct: 170 VMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYH 229
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFNE-TKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
E D VL + L+ MYAK G ++ A +FN KD+ +++ ++ LA G LF
Sbjct: 230 VEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLF 289
Query: 437 KELI-REGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLS 495
E+ + + P+ +T +L AC + ++EG F M EFG+ P +HY +V++
Sbjct: 290 SEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYG 349
Query: 496 KAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLV 555
++G++KEA + +MP + +W +LS + GD++ E K ++E +P Y++
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 409
Query: 556 LAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTF 599
L+ Y GRW + +R +ME K + GCS+ ++ V+ F
Sbjct: 410 LSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 128/242 (52%), Gaps = 11/242 (4%)
Query: 38 HAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQL 97
HA L GL+ ++ L++YS G + A +VFDD K+ +WN + K+G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 98 GNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQ-----GAGMRPSSFTFSI 152
+A +LFD MP R+V+SW+ +I+GY G +AL+LF EMQ A +RP+ FT S
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 153 LTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM-KK 208
+ S + + K VH I + +++ ++VLG +LI MY K G ++ + V + K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEI-DIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D+ ++++++ G + F +M ++ + P+ T ++ C + +++GK
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 268 VF 269
F
Sbjct: 324 YF 325
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 156/371 (42%), Gaps = 45/371 (12%)
Query: 115 WNSMISGYASNGFSSD---ALELFVEMQGAGMRPSSFTFSILTSLVSSPCH---AKQVHG 168
WN +I N S + +++ M+ + P TF L +P H ++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 169 RIIRSGMDLSNVVLG------------------------------NSLIAMYGKVGLVDY 198
+I+ G+D V NS++ Y K GL+D
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 199 SFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMR-----DAELLPDQFTCSTLM 253
+ + M + ++ISW+ L+ G ++ AL F +M+ +A + P++FT ST++
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 254 SVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-QDRWDT 312
S C L L++GK V A+ K + ++ +A ID+++KC LE + R+F + D
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 313 ALCTSMISSYATHDLGEDALHLFV-LTLRENIRPTEY-MVSCLLSSFSIFLPVEVGIQIH 370
++MI A + L ++ LF +T +NI P V L + L E
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKV 429
++ + G +V +Y + G+I +A ++ D++ W +++ G G +
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 430 SVTLDLFKELI 440
K LI
Sbjct: 387 KTCEGALKRLI 397
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 184/363 (50%)
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
PD FT + + C ++ + K ++ + GF+ ++IV+++ + +S +E + ++
Sbjct: 105 PDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKV 164
Query: 304 FTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPV 363
F E D MI ++ L AL ++ E + Y + LLSS + +
Sbjct: 165 FDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSAL 224
Query: 364 EVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGL 423
+G+ +H + + ES +++ L+ MYAK G +++A+ +FN + +D+++WN++++G
Sbjct: 225 NMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGY 284
Query: 424 AYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPG 483
+G + F++++ G+ P+ IT +LL C++ V EG++ F M ++F + P
Sbjct: 285 GVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPN 344
Query: 484 EEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIM 543
+HY +V++ +AG L+ +++++ +WR +L C IH +L++ E K+++
Sbjct: 345 VKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLV 404
Query: 544 EREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQ 603
+ E Y+++ Y ++ +RK + + G SW + + V+ F +
Sbjct: 405 QLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDD 464
Query: 604 LQH 606
H
Sbjct: 465 KMH 467
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 13/253 (5%)
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
+G + A ++FD MPVRD+VSWN MI ++ G + AL ++ M G+ S+T L
Sbjct: 155 NGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYT---L 211
Query: 154 TSLVSSPCHAKQVHGRII--RSGMDL---SNVVLGNSLIAMYGKVGLVDYSFSVILTMKK 208
+L+SS H ++ ++ R D+ S V + N+LI MY K G ++ + V M+K
Sbjct: 212 VALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRK 271
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D+++WNS++ GH A++ F KM + + P+ T L+ CS+ + +G +
Sbjct: 272 RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEH 331
Query: 269 FAF-CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL-FTEQDRWDTALCTSMISSYATH- 325
F + N +DL+ + +LE+S+ + + D L +++ S H
Sbjct: 332 FEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHR 391
Query: 326 --DLGEDALHLFV 336
+LGE A+ V
Sbjct: 392 NLELGEVAMKKLV 404
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 7/170 (4%)
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
RP + + L S + ++IH V + GF DA++A++LV Y+ G ++ A
Sbjct: 104 RPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASK 163
Query: 404 IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
+F+E ++DLVSWN ++ ++ G + L ++K + EG+ D TL A+L +C + S
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 464 VDEGI---KIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
++ G+ +I + E V +++M +K G L+ AI + M
Sbjct: 224 LNMGVMLHRIACDIRCESCVFVSNA----LIDMYAKCGSLENAIGVFNGM 269
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 93 KSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
K G L NA +F+GM RDV++WNSMI GY +G +A+ F +M +G+RP++ TF
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 153 LTSLVSSPCHAKQ--VHGRIIRSGMDLS-NVVLGNSLIAMYGKVGLVDYSFSVILTMK-K 208
L S K+ H I+ S L+ NV ++ +YG+ G ++ S +I
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCH 374
Query: 209 IDIISWNSLMWAC--HR 223
D + W +L+ +C HR
Sbjct: 375 EDPVLWRTLLGSCKIHR 391
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 185/413 (44%), Gaps = 34/413 (8%)
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLP-DQFTCSTLMSVCSNLRDLDKGKQVF 269
+IS + + G+HE AL F +M + LP D S + C+ G V
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSY------- 322
A K F+ N V A +D++ KC + + +LF E + + + +MIS Y
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 323 --------------------------ATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
T D A+ + + +P + L+S+
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 357 FSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSW 416
S + +IH+ + E L S LV Y + G I +F+ + +D+V+W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 417 NTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMET 476
++++ A +G L F+E+ + PD I VL AC++ DE + F M+
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 477 EFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIE 536
++G++ ++HY+ +V++LS+ G +EA +++ MP T W +L C +G++++ E
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 537 TVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
A+E++ EP+ P Y++L + Y +GR E R+R M++ K G SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 151/328 (46%), Gaps = 21/328 (6%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
VHAH +K + ++G LD+Y ++ A K+FD+I +N+ WN + G+
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 97 LGNACQLFDGMPV-RDVVSWNSMISGY-ASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
+ A +L++ M V + S+N++I G + S A+E + +M +P+ T L
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLIT---LL 186
Query: 155 SLVSSPCHA-------KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
+LVS+ C A K++H R+ ++ + L + L+ YG+ G + Y V +M+
Sbjct: 187 ALVSA-CSAIGAFRLIKEIHSYAFRNLIE-PHPQLKSGLVEAYGRCGSIVYVQLVFDSME 244
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
D+++W+SL+ A G E AL F +M A++ PD ++ CS+ D+
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 268 VFA-FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMI----SSY 322
F G + S +D+ S+ R E++ ++ TA + +Y
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 323 ATHDLGEDALHLFVLTLRENIRPTEYMV 350
+L E A ++ EN P Y++
Sbjct: 365 GEIELAEIAARELLMVEPEN--PANYVL 390
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 122/306 (39%), Gaps = 20/306 (6%)
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLL--SSFSIFLPVEVGIQIHALV 373
T +SSYA E AL+LF+ P + V L S + F PV +G +HA
Sbjct: 16 TKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV-LGGSVHAHS 74
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTL 433
K F S+ + L+ MY K + A +F+E ++ V WN ++ + GKV +
Sbjct: 75 VKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAV 134
Query: 434 DLFKELIREGMAPDRITLAAV---LLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV 490
+L++ + + P+ + A+ L+ GS+ I+ + M EF KP +
Sbjct: 135 ELYEAM---DVMPNESSFNAIIKGLVGTEDGSY--RAIEFYRKM-IEFRFKPNLITLLAL 188
Query: 491 VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAP 550
V S G + +I + +L + +G I V E +
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 551 FPYLVLAQAYQMMGRWESLVRVRKDME-QKCTKEFI-------GCSWFGMKNHVYTFQSN 602
+ L AY + G ES ++ ++ME K T + I CS G+ + +
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 603 QLQHYG 608
YG
Sbjct: 309 MQGDYG 314
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 218/493 (44%), Gaps = 67/493 (13%)
Query: 153 LTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYG---KVGLVDYSFSVILTMKKI 209
T S +Q H ++++G+ + + L+A + V Y+ S++ +
Sbjct: 45 FTERAKSLTEIQQAHAFMLKTGL-FHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSP 103
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
+ + NS++ A + E+AL F +M + PD+++ + ++ C+ ++G+Q+
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLE------------------------------D 299
K G V + V + ++++ + E D
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVD 223
Query: 300 SVR-LFTEQDRWDTALCTSMISSYATHDLGEDALHLF-VLTLRENI-------------- 343
R LF E + + MIS YA L ++A +F + +R+ +
Sbjct: 224 EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283
Query: 344 -----------------RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
+P + + +LS+ + + G +H + K G E + LA+
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT 343
Query: 387 TLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
LV MY+K G ID AL +F T +D+ +WN+I+ L+ +G L++F E++ EG P
Sbjct: 344 ALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKP 403
Query: 447 DRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
+ IT VL ACN+ +D+ K+F M + + V+P EHY +V++L + G ++EA ++
Sbjct: 404 NGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEEL 463
Query: 507 VETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRW 566
V +P + +L C G L+ E +A ++E + Y ++ Y GRW
Sbjct: 464 VNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRW 523
Query: 567 ESLVRVRKDMEQK 579
E ++ R++M +
Sbjct: 524 EKVIDGRRNMRAE 536
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 135/258 (52%), Gaps = 6/258 (2%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV 113
N L Y + G +++A +FD++ +N SWN + G +G + A ++FD MPVRDVV
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV 269
Query: 114 SWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTF-SILTSLVS--SPCHAKQVHGR 169
SWN+M++ YA G ++ LE+F +M + +P FT S+L++ S S + VH
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVY 329
Query: 170 IIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHEL 229
I + G+++ L +L+ MY K G +D + V K D+ +WNS++ G +
Sbjct: 330 IDKHGIEIEG-FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS-SAAI 288
AL F +M P+ T ++S C+++ LD+ +++F V V +I +
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 289 DLFSKCNRLEDSVRLFTE 306
DL + ++E++ L E
Sbjct: 449 DLLGRMGKIEEAEELVNE 466
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 146/348 (41%), Gaps = 70/348 (20%)
Query: 1 MYTFLKQTQGPYTSLSYCST-LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDL 59
+ F + GP Y T +L C + + +H F+K GL T ++ N +++
Sbjct: 125 LTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNV 184
Query: 60 YSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMI 119
Y G+ A KV D MPVRD VSWNS++
Sbjct: 185 YGRSGYFEIARKVLDR-------------------------------MPVRDAVSWNSLL 213
Query: 120 SGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSN 179
S Y G +A LF EM+ N
Sbjct: 214 SAYLEKGLVDEARALFDEMEE-------------------------------------RN 236
Query: 180 VVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-R 238
V N +I+ Y GLV + V +M D++SWN+++ A G + L F KM
Sbjct: 237 VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
D+ PD FT +++S C++L L +G+ V + K G +++A +D++SKC +++
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 299 DSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPT 346
++ +F + D + S+IS + H LG+DAL +F + E +P
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 167/331 (50%), Gaps = 4/331 (1%)
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTL 339
N + +A + +++ + ++V LF + D +++++ + L +A+ LF +
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 340 RE-NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGII 398
E +IRP E V C+LS+ + +++ IHA + SD ++++LV +Y K G +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 399 DDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIR---EGMAPDRITLAAVL 455
++A +F K L +WN+++ A +G+ + +F+E+++ + PD IT +L
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTIT 515
AC +G V +G F M FG++P EHY ++++L +AG EA++++ TM
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKAD 431
Query: 516 LDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKD 575
+W +L+ C IHG L + E K ++ P ++A Y MG WE R RK
Sbjct: 432 EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 576 MEQKCTKEFIGCSWFGMKNHVYTFQSNQLQH 606
++ + + G S + N V+ F S H
Sbjct: 492 IKHQNAYKPPGWSRIEIDNEVHQFYSLDKSH 522
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 14/310 (4%)
Query: 36 IVHAHFLKLGLNTYTYLGNRCLDLY-SDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
+VH H K G + Y + L Y S + HI A ++FD++S +N SW L G +S
Sbjct: 147 LVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARS 206
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTFSIL 153
G + NA LF+ MP RDV SWN++++ NG +A+ LF M +RP+ T +
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 154 TSLVSSPCH---AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
S + AK +H R + S+V + NSL+ +YGK G ++ + SV K
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLS-SDVFVSNSLVDLYGKCGNLEEASSVFKMASKKS 325
Query: 211 IISWNSLMWACHRAGHHELALAHF---YKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQ 267
+ +WNS++ G E A+A F K+ ++ PD T L++ C++ + KG+
Sbjct: 326 LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG 385
Query: 268 VFAF-CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF-TEQDRWDTALCTSMISSYATH 325
F + G IDL + R ++++ + T + + D A+ S++++ H
Sbjct: 386 YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
Query: 326 ---DLGEDAL 332
DL E A+
Sbjct: 446 GHLDLAEVAV 455
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 188/437 (43%), Gaps = 37/437 (8%)
Query: 29 KSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYS-DLGHINDALKVFDDISHKNSTSWNIC 87
+ +N +K V + + GL+ +L + L + L +++ A +FD S N+ +
Sbjct: 35 RHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAV 94
Query: 88 LKGLLKSGQL--GNACQLFDGMPVRDVVSWNSMI-------SGYASNGFSS--------- 129
L S L +A F M R V N I + Y S+ FS+
Sbjct: 95 LTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFK 154
Query: 130 DALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAM 189
L+V +Q A +L S SS H R + M NVV ++++
Sbjct: 155 SGFHLYVVVQTA----------LLHSYASSVSHITL--ARQLFDEMSERNVVSWTAMLSG 202
Query: 190 YGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKM-RDAELLPDQFT 248
Y + G + + ++ M + D+ SWN+++ AC + G A++ F +M + + P++ T
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
++S C+ L K + AF ++ + VS++ +DL+ KC LE++ +F
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLREN---IRPTEYMVSCLLSSFSIFLPVEV 365
+ SMI+ +A H E+A+ +F ++ N I+P LL++ + V
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 366 GIQIHALVP-KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGL 423
G L+ + G E L+ + + G D+AL + + K+K D W +++
Sbjct: 383 GRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNAC 442
Query: 424 AYNGKVSVTLDLFKELI 440
+G + + K L+
Sbjct: 443 KIHGHLDLAEVAVKNLV 459
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 19/275 (6%)
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL--FSKCNRL 297
AE L +QF + +V S R L+ KQV +F G ++ + + CN L
Sbjct: 19 AEQLLNQF----ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCN-L 73
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYAT----HDLGEDALHLFVLTLRENI-RPTEYMVSC 352
+ +F +T L +++++Y++ H A F L + ++ RP ++
Sbjct: 74 SYARFIFDRFSFPNTHLYAAVLTAYSSSLPLH--ASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK-FGIIDDALHIFNETKIK 411
+L S +H + K GF V+ + L+H YA I A +F+E +
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
++VSW ++ G A +G +S + LF+++ D + A+L AC E + +F
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPER----DVPSWNAILAACTQNGLFLEAVSLF 247
Query: 472 FSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
M E ++P E V+ ++ G L+ A I
Sbjct: 248 RRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGI 282
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 239/517 (46%), Gaps = 57/517 (11%)
Query: 116 NSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH--------AKQVH 167
+++I + S G AL L+ G+R F L+ C K +H
Sbjct: 15 SNLIKNHISRGSPIQALVLY-----GGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLH 69
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHH 227
I+ G+ S+V++G+SLI+MYGK G V + V M + ++ +WN+++ G
Sbjct: 70 SESIKFGV-CSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 228 ELALAHFY-------------------------KMRDA-ELLPDQF----TCSTLMSVCS 257
LA F K R+ E +P + S ++ V
Sbjct: 129 VLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYV 188
Query: 258 NLRDLDKGKQVFA-FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCT 316
N R ++ ++ F K FV++ ++S + + + ++ +F D +
Sbjct: 189 NNRKMEDARKFFEDIPEKNAFVWSLMMSG-----YFRIGDVHEARAIFYRVFARDLVIWN 243
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
++I+ YA + +DA+ F E P VS +LS+ + ++VG ++H+L+
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR 303
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
G E + +++ L+ MYAK G +++A +F ++ + N+++ LA +GK L++F
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMF 363
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
+ + PD IT AVL AC +G F+ EG+KIF M+T+ VKP +H+ ++ +L +
Sbjct: 364 STMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGR 422
Query: 497 AGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPY--- 553
+G LKEA +V+ M + +L C +H D ++ E V K I+E Y
Sbjct: 423 SGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSEN 481
Query: 554 --LVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCS 588
++ Y RW++ +R +ME++ ++ G S
Sbjct: 482 HLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 180/380 (47%), Gaps = 9/380 (2%)
Query: 35 KIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
K++H+ +K G+ + +G+ + +Y G + A KVFD++ +N +WN + G + +
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSN 125
Query: 95 GQLGNACQLFDGMPV-RDVVSWNSMISGYASNGFSSDALELFVEM--QGAGMRPSSFTFS 151
G A LF+ + V R+ V+W MI GY A ELF M + ++ S
Sbjct: 126 GDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLG 185
Query: 152 ILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI 211
+ + + K R + N + + +++ Y ++G V + ++ + D+
Sbjct: 186 VYVN------NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL 239
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAF 271
+ WN+L+ + G+ + A+ F+ M+ PD T S+++S C+ LD G++V +
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 272 CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDA 331
G N VS+A ID+++KC LE++ +F A C SMIS A H G++A
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEA 359
Query: 332 LHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHM 391
L +F +++P E +L++ + G++I + + + + L+H+
Sbjct: 360 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHL 419
Query: 392 YAKFGIIDDALHIFNETKIK 411
+ G + +A + E +K
Sbjct: 420 LGRSGKLKEAYRLVKEMHVK 439
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 116/313 (37%), Gaps = 79/313 (25%)
Query: 4 FLKQTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDL 63
F Q +G S++L C ++ + VH+ G+ ++ N +D+Y+
Sbjct: 263 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 64 GHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYA 123
G + +A VF+ IS VR V NSMIS A
Sbjct: 323 GDLENATSVFESIS-------------------------------VRSVACCNSMISCLA 351
Query: 124 SNGFSSDALELFVEMQGAGMRPSSFTF-SILTSLVSSPCHAKQVHGRIIRSGMDLSNVVL 182
+G +ALE+F M+ ++P TF ++LT+ VHG + G+ +
Sbjct: 352 IHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC---------VHGGFLMEGLKI----- 397
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKM-RDA 240
FS + T K ++ + L+ R+G L Y++ ++
Sbjct: 398 -----------------FSEMKTQDVKPNVKHFGCLIHLLGRSGK----LKEAYRLVKEM 436
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
+ P+ L+ C D + +QV G + NS +S+ N L
Sbjct: 437 HVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNS---------YSE-NHLASI 486
Query: 301 VRLFTEQDRWDTA 313
L+ +RW TA
Sbjct: 487 SNLYAHTERWQTA 499
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 197/378 (52%), Gaps = 15/378 (3%)
Query: 235 YKMRDAELLPDQFTCSTLMSVCSNLR--DLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFS 292
++ R + D F+ + V S + LD G+Q+ A K+GF + ++ + +S
Sbjct: 53 HRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYS 111
Query: 293 KCNRLEDSVRLFTEQ-DRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVS 351
++ + ++F E ++ + L T+MIS+Y ++ +A+ LF E I +V+
Sbjct: 112 SVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVT 171
Query: 352 CLLSSFSIFLPVEVGIQIHA--LVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
LS+ + V++G +I++ + K D L ++L++MY K G + A +F+E+
Sbjct: 172 VALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESM 231
Query: 410 IKDLVSWNTIMMGLAYNGKVSVTLDLFKEL--IREG----MAPDRITLAAVLLACNYGSF 463
KD+ ++ +++ G A NG+ +L+LFK++ I + + P+ +T VL+AC++
Sbjct: 232 RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGL 291
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLIL 523
V+EG + F SM ++ +KP E H+ +V++ ++G LK+A + + MP +WR +L
Sbjct: 292 VEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLL 351
Query: 524 SVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKE 583
C +HG++++ E V + I E + Y+ L+ Y G W+ ++R + + +
Sbjct: 352 GACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RR 408
Query: 584 FIGCSWFGMKNHVYTFQS 601
G SW + + + F S
Sbjct: 409 MPGKSWIELGSIINEFVS 426
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 144/312 (46%), Gaps = 16/312 (5%)
Query: 148 FTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI-LTM 206
F + ++ +S +Q+H + + G + + + + SL+ Y VG VDY+ V T
Sbjct: 69 FAIKVSSAQKASSLDGRQIHALVRKLGFN-AVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGK 266
+K +I+ W +++ A + A+ F +M ++ D + +S C++L + G+
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 267 QVFAFCFKVG--FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYAT 324
++++ K + + ++ ++++ K E + +LF E R D TSMI YA
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYAL 247
Query: 325 HDLGEDALHLF--VLTLREN----IRPTEYMVSCLLSSFSIFLPVEVGIQ-IHALVPKLG 377
+ +++L LF + T+ ++ I P + +L + S VE G + +++
Sbjct: 248 NGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYN 307
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLF 436
+ +V ++ + G + DA N+ IK + V W T++ + +G V +L
Sbjct: 308 LKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNV----ELG 363
Query: 437 KELIREGMAPDR 448
+E+ R DR
Sbjct: 364 EEVQRRIFELDR 375
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 133/312 (42%), Gaps = 51/312 (16%)
Query: 37 VHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQ 96
+HA KLG N + + YS +G ++ A +VFD+ K
Sbjct: 87 IHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK----------------- 129
Query: 97 LGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+++V W +MIS Y N S +A+ELF M+ + ++ S
Sbjct: 130 -------------QNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSA 176
Query: 157 ---VSSPCHAKQVHGRIIRSGMDLS-NVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
+ + ++++ R I+ L+ ++ L NSL+ MY K G + + + + D+
Sbjct: 177 CADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVT 236
Query: 213 SWNSLMWACHRAGHHELALAHFYKMR------DAELLPDQFTCSTLMSVCSNLRDLDKGK 266
++ S+++ G + +L F KM+ D + P+ T ++ CS+ +++GK
Sbjct: 237 TYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296
Query: 267 QVFAFCFKVGFVYNSIVSSA----AIDLFSKCNRLEDSVRLFTEQD-RWDTALCTSMISS 321
+ F YN A +DLF + L+D+ + + +T + +++ +
Sbjct: 297 RHFKSMI---MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 322 YATH---DLGED 330
+ H +LGE+
Sbjct: 354 CSLHGNVELGEE 365
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 202/430 (46%), Gaps = 35/430 (8%)
Query: 212 ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK--GKQVF 269
+SW S + R G A F M A + P+ T L+S C + + G +
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 270 AFCFKVGFVYNSI-VSSAAIDLFSKCNR-------------------------------L 297
+ K+G N + V +A I ++SK R +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
+++ ++F + D T+MI+ + E+AL F ++P + L++
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWN 417
+ + G+ +H V F+++ ++++L+ +Y + G ++ A +F + + +VSWN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
++++G A NG +L F+++ +G PD +T L AC++ V+EG++ F M+ +
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVI-E 536
+ + P EHY +V++ S+AG L++A+ +V++MP + +L+ C HG+ V+ E
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 537 TVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHV 596
+ K + + ++ Y++L+ Y G+WE ++R+ M+ K+ G S + + +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 597 YTFQSNQLQH 606
+ F + H
Sbjct: 457 HVFMAGDNAH 466
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 152/275 (55%), Gaps = 10/275 (3%)
Query: 36 IVHAHFLKLGLN-TYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKS 94
++H + KLGL+ + +G + +YS G A VFD + KNS +WN + G ++S
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT 154
GQ+ NA ++FD MP RD++SW +MI+G+ G+ +AL F EMQ +G++P +I+
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD--YVAIIA 211
Query: 155 SLVSSPCHAKQVHG----RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
+L + G R + S +NV + NSLI +Y + G V+++ V M+K
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
++SWNS++ G+ +L +F KM++ PD T + ++ CS++ +++G + F
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 271 FCFKVGFVYNSIVS--SAAIDLFSKCNRLEDSVRL 303
K + + + +DL+S+ RLED+++L
Sbjct: 332 I-MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 146/338 (43%), Gaps = 39/338 (11%)
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS-----LVSSPCHAKQV 166
VSW S I+ NG ++A + F +M AG+ P+ TF L S S +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGL------------------------------- 195
HG + G+D ++V++G ++I MY K G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 196 VDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSV 255
VD + + M + D+ISW +++ + G+ E AL F +M+ + + PD ++
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 256 CSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC 315
C+NL L G V + F N VS++ IDL+ +C +E + ++F ++
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 316 TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPK 375
S+I +A + ++L F + +P + L++ S VE G++ ++ K
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM-K 334
Query: 376 LGFESDAVLA--STLVHMYAKFGIIDDALHIFNETKIK 411
+ + LV +Y++ G ++DAL + +K
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 188/399 (47%), Gaps = 36/399 (9%)
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
+N+L+ + G ++ +LA F M + + P+ T +L+ + + G +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFT---------------------EQDRW-- 310
K GF+++ V ++ + + + LE S ++F E D
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 311 --------DTALCTSMISSYATHDLGEDALHLF---VLTLRENIRPTEYMVSCLLSSFSI 359
D T++I+ ++ L AL +F + R I P E +LSS +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 360 FLP--VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWN 417
F + +G QIH V L + L+ MY K G ++ AL IF++ + K + +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
I+ LA NG+ L++F+ + + P+ ITL A+L AC VD GI++F S+ +E
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIET 537
+ + P EHY VV+++ +AG+L +A + ++++P+ + +L C IH + ++ T
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 538 VAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVRKDM 576
V K+++ +PQ Y+ L+ + W ++RK M
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAM 452
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 146/293 (49%), Gaps = 10/293 (3%)
Query: 20 TLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+L+ S SV++ +H LK G ++ + Y ++G + + K+FDDI +
Sbjct: 91 SLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNP 150
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM- 138
+ N L ++G++ A + F MPV DVVSW ++I+G++ G + AL +F EM
Sbjct: 151 CVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMI 210
Query: 139 --QGAGMRPSSFTF-SILTSLVSSPCH----AKQVHGRIIRSGMDLSNVVLGNSLIAMYG 191
+ A + P+ TF S+L+S + KQ+HG ++ + + LG +L+ MYG
Sbjct: 211 QNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI-ILTTTLGTALLDMYG 269
Query: 192 KVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
K G ++ + ++ ++ + +WN+++ A G + AL F M+ + + P+ T
Sbjct: 270 KAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLA 329
Query: 252 LMSVCSNLRDLDKGKQVF-AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
+++ C+ + +D G Q+F + C + + S +DL + L D+
Sbjct: 330 ILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANF 382
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 318 MISSYATHDLGEDALHLFVLTLR-ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
MI Y + E+AL L +I+P ++ + L++ + + +H+L+
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLF 436
G E +A+L+S LV +YAK G I + +F K D+ WN ++ G A +G + + +F
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
E+ E ++PD IT +L C++ ++EG + F M F ++P EHY +V++L +
Sbjct: 255 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 314
Query: 497 AGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVL 556
AG +KEA +++E+MP + +WR +LS + + ++ E + + + + Y++L
Sbjct: 315 AGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSG---DYVLL 371
Query: 557 AQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQSNQLQHYGGKDXXXXX 616
+ Y +WES +VR+ M ++ ++ G SW ++ F++ H K
Sbjct: 372 SNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVL 431
Query: 617 XXXVWEMETEGYV 629
+ + +++G+V
Sbjct: 432 EGLIQKTKSQGFV 444
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 18/327 (5%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKV---FDDIS 77
+L+ C + + V HA KLG TY L + Y A ++ F +S
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS 95
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
+ N+ ++ L+K G+ G A ++ ++V++WN MI GY N +AL+
Sbjct: 96 -PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKN 154
Query: 138 MQG-AGMRPSSFTFSILTSLVSSPC-----HAKQVHGRIIRSGMDLSNVVLGNSLIAMYG 191
M ++P+ F+F+ +SL + HAK VH +I SG++L N +L ++L+ +Y
Sbjct: 155 MLSFTDIKPNKFSFA--SSLAACARLGDLHHAKWVHSLMIDSGIEL-NAILSSALVDVYA 211
Query: 192 KVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
K G + S V ++K+ D+ WN+++ G A+ F +M + PD T
Sbjct: 212 KCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLG 271
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS-SAAIDLFSKCNRLEDSVRLFTEQD-R 309
L++ CS+ L++GK+ F + + + A +DL + R++++ L
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 310 WDTALCTSMISS---YATHDLGEDALH 333
D + S++SS Y +LGE A+
Sbjct: 332 PDVVIWRSLLSSSRTYKNPELGEIAIQ 358
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 131/276 (47%), Gaps = 6/276 (2%)
Query: 151 SILTSLVSS--PCHAKQVHGRIIRSGMDLSNVVLG-NSLIAMYGKVGLVDYSFSVILTMK 207
S+L S V++ C+ + R++ + LS V N +I K+G + V+
Sbjct: 66 SLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNAS 125
Query: 208 KIDIISWNSLMWACHRAGHHELALAHFYKMRD-AELLPDQFTCSTLMSVCSNLRDLDKGK 266
++I+WN ++ R +E AL M ++ P++F+ ++ ++ C+ L DL K
Sbjct: 126 DQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAK 185
Query: 267 QVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHD 326
V + G N+I+SSA +D+++KC + S +F R D ++ +MI+ +ATH
Sbjct: 186 WVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHG 245
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVP-KLGFESDAVLA 385
L +A+ +F E++ P LL++ S +E G + L+ + +
Sbjct: 246 LATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY 305
Query: 386 STLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
+V + + G + +A + I+ D+V W +++
Sbjct: 306 GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 39/400 (9%)
Query: 228 ELALAHFYKMRDAELLP-DQFTCSTLMSVCSNLR--DLDKGKQVFAFCFKVGFVYNSIVS 284
+L HF + L P D FT L+ SN R L G + K+GF + V
Sbjct: 102 QLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQ 161
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDR------------------WDTALC----------- 315
+A + ++ + D+ ++F E ++ ALC
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 316 --TSMISSYATHDLGEDALHLFVLTLR-ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHAL 372
T++I YA D ++A+ LF + + I+P E + +L + +++ +HA
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 373 VPKLGF-ESDAVLASTLVHMYAKFGIIDDALHIFNETK--IKDLVSWNTIMMGLAYNGKV 429
V K GF D + ++L+ YAK G I A F E K+LVSW T++ A +G
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 430 SVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF-SMETEFGVKPGEEHYT 488
+ +FK++ R G+ P+R+T+ +VL AC++G +E FF +M E+ + P +HY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 489 YVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQ 548
+V+ML + G L+EA I +P +WR++L C ++ D ++ E V +++ME E
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERS 461
Query: 549 APFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCS 588
Y++++ + GR+ R RK M+ + + G S
Sbjct: 462 HGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 6/222 (2%)
Query: 43 KLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQ 102
KLG ++ Y+ + +Y G++ DA KVFD++ +N +WN+ + GL G A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 103 LFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGA-GMRPSSFTFSILTSLVSSPC 161
+ MP R VVSW ++I GYA +A+ LF M ++P+ T + V +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 162 HAK---QVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK--KIDIISWNS 216
K VH + + G ++ + NSLI Y K G + +F + + + +++SW +
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSN 258
++ A G + A++ F M L P++ T ++++ CS+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH 372
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 204/473 (43%), Gaps = 37/473 (7%)
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
H QVH R+I SG + + L+ + G Y+ S+ ++ K + N + A
Sbjct: 37 HLFQVHARLITSG-NFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAY 93
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
+ + AL ++ + +PD +T +L+S +D GK K G
Sbjct: 94 LVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVL 153
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISS-------YATHDLGED---- 330
V ++ + +++ C L+ + +LF E + D S+I+ A H L ++
Sbjct: 154 PVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDK 213
Query: 331 --------------------ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
++ LF +R + E + LL++ ++ G +H
Sbjct: 214 NIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVH 273
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVS 430
A + + S V+ + L+ MY K + A IF+ I++ V+WN +++ +G+
Sbjct: 274 ASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPE 333
Query: 431 VTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYV 490
L+LF+ +I + PD +T VL C V +G + M EF +KP H +
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 491 VEMLSKAGMLKEAIDIVETMP---YTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREP 547
+ S AG +EA + ++ +P T W +LS G+ + E++AK ++E +P
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 548 QAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSWFGMKNHVYTFQ 600
Y +L Y + GRWE + RVR+ ++++ GC +K V+ +
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLR 506
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 8/263 (3%)
Query: 12 YTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALK 71
YT +S S + C V+ K+ H +K G + + N + +Y+ G ++ A K
Sbjct: 119 YTFVSLISCIEKTCC----VDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKK 174
Query: 72 VFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDA 131
+F +I ++ SWN + G++++G + A +LFD MP ++++SWN MIS Y +
Sbjct: 175 LFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVS 234
Query: 132 LELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ---VHGRIIRSGMDLSNVVLGNSLIA 188
+ LF EM AG + + T +L + K+ VH +IR+ ++ S+VV+ +LI
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLN-SSVVIDTALID 293
Query: 189 MYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
MYGK V + + ++ + ++WN ++ A G E L F M + L PD+ T
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVT 353
Query: 249 CSTLMSVCSNLRDLDKGKQVFAF 271
++ C+ + +G+ ++
Sbjct: 354 FVGVLCGCARAGLVSQGQSYYSL 376
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 144/364 (39%), Gaps = 40/364 (10%)
Query: 116 NSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIR 172
N + Y + AL + ++ G P S+TF L S + C K HG+ I+
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 173 SGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGH----HE 228
G D + + NSL+ MY G +D + + + + K DI+SWNS++ R G H+
Sbjct: 147 HGCD-QVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 229 L---------------------------ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
L +++ F +M A ++ T L++ C
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISS 321
L +G+ V A + + ++ +A ID++ KC + + R+F + MI +
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 322 YATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHAL-VPKLGFES 380
+ H E L LF + +RP E +L + V G ++L V + +
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKDL----VSWNTIMMGLAYNGKVSVTLDLF 436
+ + ++Y+ G ++A +D+ W ++ + G ++ +
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 437 KELI 440
K LI
Sbjct: 446 KSLI 449
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 171/381 (44%), Gaps = 36/381 (9%)
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHR 223
KQ+H +II+ + ++ +L LI++ G Y+ V ++ +WN LM
Sbjct: 37 KQIHTKIIKHNLT-NDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWN-LMIRSLS 94
Query: 224 AGH--HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
H E L M + D+FT ++ C + G QV K GF +
Sbjct: 95 VNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDV 154
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTEQD-----RWDTALC--------------------- 315
+ +DL+ KC + + ++F + W T L
Sbjct: 155 FFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMR 214
Query: 316 -----TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIH 370
T+MI++Y + ++A LF ++++P E+ + LL + + + +G +H
Sbjct: 215 NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVH 274
Query: 371 ALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVS 430
K GF D L + L+ MY+K G + DA +F+ + K L +WN+++ L +G
Sbjct: 275 DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGE 334
Query: 431 VTLDLFKELIREG-MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
L LF+E+ E + PD IT VL AC V +G++ F M +G+ P EH
Sbjct: 335 EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNAC 394
Query: 490 VVEMLSKAGMLKEAIDIVETM 510
++++L +A +++A ++VE+M
Sbjct: 395 MIQLLEQALEVEKASNLVESM 415
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 5/259 (1%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
++ CL+ S+ VH +K G + N +DLY G + KVFD + ++
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
SW L GL+ + QL +A +F+ MP+R+VVSW +MI+ Y N +A +LF MQ
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 141 AGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVD 197
++P+ FT L ++ + S + VH ++G L + LG +LI MY K G +
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL-DCFLGTALIDMYSKCGSLQ 303
Query: 198 YSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHF-YKMRDAELLPDQFTCSTLMSVC 256
+ V M+ + +WNS++ + G E AL+ F +A + PD T ++S C
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 257 SNLRDLDKGKQVFAFCFKV 275
+N ++ G + F +V
Sbjct: 364 ANTGNVKDGLRYFTRMIQV 382
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 135/334 (40%), Gaps = 61/334 (18%)
Query: 34 VKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLK 93
+K +H +K L L + + + S G A VF+ + ++ +WN+ ++ L
Sbjct: 36 LKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSV 95
Query: 94 SGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
+ + A LF M ++S S + +F F I
Sbjct: 96 NHKPREALLLFILM----MISHQSQFDKF------------------------TFPFVIK 127
Query: 154 TSLVSSPCH-AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII 212
L SS QVHG I++G ++V N+L+ +Y K G D V M I+
Sbjct: 128 ACLASSSIRLGTQVHGLAIKAGF-FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIV 186
Query: 213 SWNSLMW-------------------------------ACHRAGHHELALAHFYKMRDAE 241
SW ++++ A + + A F +M+ +
Sbjct: 187 SWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD 246
Query: 242 LLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSV 301
+ P++FT L+ + L L G+ V + K GFV + + +A ID++SKC L+D+
Sbjct: 247 VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDAR 306
Query: 302 RLFTEQDRWDTALCTSMISSYATHDLGEDALHLF 335
++F A SMI+S H GE+AL LF
Sbjct: 307 KVFDVMQGKSLATWNSMITSLGVHGCGEEALSLF 340
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 19/258 (7%)
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
S + CSN L KQ+ K + ++ I + S + + +F +
Sbjct: 23 ASYFLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQ 79
Query: 309 RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMV------SCLLSSFSIFLP 362
T MI S + + +AL LF+L + + + +CL SS
Sbjct: 80 SPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS-----S 134
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMG 422
+ +G Q+H L K GF +D +TL+ +Y K G D +F++ + +VSW T++ G
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 423 LAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKP 482
L N ++ +F ++ + ++ A++ A DE ++F M+ + VKP
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNV----VSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKP 249
Query: 483 GEEHYTYVVEMLSKAGML 500
E +++ ++ G L
Sbjct: 250 NEFTIVNLLQASTQLGSL 267
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 202/415 (48%), Gaps = 17/415 (4%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVH 167
D+V+ +S+++GY + SDA+ L +M G +P +FTF+ L L + A +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHR 223
++++ G V G +++ K G +D + S++ M+K D++ +N+++ +
Sbjct: 212 DQMVQRGCQPDLVTYG-TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
H + AL F +M + + PD FT S+L+S N ++ + + N +
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTL 339
SA ID F K +L ++ +L+ E + D +S+I+ + HD ++A H+F L +
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
++ P S L+ F VE G+++ + + G + V +TL+H + + D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 400 DALHIFNETKI----KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
+A +F + +++++N ++ GL NGK++ + +F+ L R M PD T ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
V++G ++F ++ + GV P Y ++ + G +EA +++ M
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 170/400 (42%), Gaps = 38/400 (9%)
Query: 83 SWNICLKGLLKSGQLGNACQLFDGMPV----RDVVSWNSMISGYASNGFSSDALELFVEM 138
++ + GL K G + A L M DVV +N++I G DAL LF EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 139 QGAGMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
G+RP FT+S SL+S C+ A ++ +I ++ NVV ++LI + K
Sbjct: 285 DNKGIRPDVFTYS---SLISCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSALIDAFVK 340
Query: 193 VGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
G + + + M K DI +++SL+ + A F M + P+ T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD 308
STL+ + +++G ++F + G V N++ + I F + +++ +F +
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM- 459
Query: 309 RWDTALCTSMISSYATHDLGED----------ALHLFVLTLRENIRPTEYMVSCLLSSFS 358
+ + + T+++ D A+ +F R + P Y + ++
Sbjct: 460 -----VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDLV 414
VE G ++ + G + + +T++ + + G ++A + + K + +
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 415 SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAV 454
++NT++ +G + +L KE+ G A D T+ V
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 156/353 (44%), Gaps = 35/353 (9%)
Query: 131 ALELFV--EMQGAGMRPSSFTFSILTSLVSSPC------HAKQVHGRIIRSGMDLSNVVL 182
A LFV +QG G P+ +F +L S C A + I+R+ LS+++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSF---FNLCGSGCWERSFASASGDYREILRN--RLSDIIK 63
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
+ + ++G ++ + I+ +N L+ A + EL ++ +M+ +
Sbjct: 64 VDDAVDLFG---------DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
D +T S ++ L V A K+G+ + + S+ ++ + R+ D+V
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 303 LFTEQD----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
L + + DT T++I H+ +A+ L ++ +P +++
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLV 414
+++ + + + K E+D V+ +T++ K+ +DDAL++F E K D+
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 415 SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEG 467
++++++ L G+ S L ++I + P+ +T +A++ A FV EG
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA-----FVKEG 342
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
+TL+ + + ++V + +G++ N LD G + A+ VF+ +
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 79 KNST----SWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSD 130
++NI ++G+ K+G++ + +LF + ++ +V+++N+MISG+ G +
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 131 ALELFVEMQGAGMRPSSFTFSIL 153
A L +M+ G P+S T++ L
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTL 579
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 191/437 (43%), Gaps = 76/437 (17%)
Query: 86 ICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGA 141
I + L K G++ +A +F+G+ DV S+ S+IS +A++G +A+ +F +M+
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 142 GMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
G +P+ T+ NV+L ++GK+G
Sbjct: 238 GCKPTLITY----------------------------NVILN-----VFGKMG------- 257
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
WN + KM+ + PD +T +TL++ C
Sbjct: 258 ----------TPWNKITSLVE-------------KMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ--DRWDTALCT--S 317
+ QVF GF Y+ + +A +D++ K +R ++++++ E + + ++ T S
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 318 MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG 377
+IS+YA + ++A+ L + +P + + LLS F VE + I + G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFNETKI----KDLVSWNTIMMGLAYNGKVSVTL 433
+ + + + MY G + + IF+E + D+V+WNT++ NG S
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEM 493
+FKE+ R G P+R T ++ A + ++ + ++ M + GV P Y V+
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAA 533
Query: 494 LSKAGMLKEAIDIVETM 510
L++ GM +++ ++ M
Sbjct: 534 LARGGMWEQSEKVLAEM 550
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 202/475 (42%), Gaps = 43/475 (9%)
Query: 68 DALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMI 119
+A +VF+++ + ++N L KS + A ++ + M + +V++NS+I
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 120 SGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRI-----IRSG 174
S YA +G +A+EL +M G +P FT+ T+L+S A +V + +R+
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTY---TTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 175 MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELA 230
N+ N+ I MYG G + + DI++WN+L+ + G
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
F +M+ A +P++ T +TL+S S ++ V+ G + + +
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 291 FSKCNRLEDSVRLFTEQD----RWDTALCTSMISSYAT-------HDLGEDALHLFVLTL 339
++ E S ++ E + + + S++ +YA H L E+
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV---- 589
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
I P ++ L+ S + + + + + GF D +++V +Y + ++
Sbjct: 590 ---IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 400 DALHIFNETKIK----DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
A + + K + + ++N++M + + + ++ +E++ +G+ PD I+ V+
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
A + + + +IF M G+ P Y + + M +EAI +V M
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 195/489 (39%), Gaps = 105/489 (21%)
Query: 48 TYTYLGNRCLDLYSDLGHINDALKVFDDISH----KNSTSWNICLKGLLKSGQLGNACQL 103
TYT L L + G + A+ +F+++ + N ++N +K G+ ++
Sbjct: 386 TYTTL----LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 104 FDGMPV----RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSS 159
FD + V D+V+WN++++ + NG S+ +F EM+ AG P TF
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF--------- 492
Query: 160 PCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI----DIISWN 215
N+LI+ Y + G + + +V M D+ ++N
Sbjct: 493 ------------------------NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
+++ A R G E + +M D P++ T +L+ +N GK++
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN------GKEIGLMHSLA 582
Query: 276 GFVYNSIVSSAAIDLF------SKCNRLEDSVRLFTE-QDRW---DTALCTSMISSYATH 325
VY+ ++ A+ L SKC+ L ++ R F+E ++R D SM+S Y
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 326 DLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLA 385
+ A + +YM + GF
Sbjct: 643 QMVAKANGVL-----------DYM------------------------KERGFTPSMATY 667
Query: 386 STLVHMYAK---FGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIR 441
++L++M+++ FG ++ L IK D++S+NT++ N ++ +F E+
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 442 EGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLK 501
G+ PD IT + + S +E I + M + G +P + Y +V+ K
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 502 EAIDIVETM 510
EA VE +
Sbjct: 787 EAKLFVEDL 795
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 104/227 (45%), Gaps = 21/227 (9%)
Query: 377 GFESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIM-----MGLAYNG 427
GF D ++L+ +A G +A+++F + + L+++N I+ MG +N
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 428 KVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHY 487
S L +++ +G+APD T ++ C GS E ++F M+ G + Y
Sbjct: 263 ITS----LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTY 317
Query: 488 TYVVEMLSKAGMLKEAIDIVETM---PYTITLDMWRLILSVCVIHGDLQVIETVAKEIME 544
++++ K+ KEA+ ++ M ++ ++ + ++S G L + ++ E
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 545 R--EPQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQKCTKEFIGCSW 589
+ +P F Y L ++ G+ ES + + ++M K I C++
Sbjct: 378 KGTKPDV-FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI-CTF 422
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 207/487 (42%), Gaps = 56/487 (11%)
Query: 12 YTSLSYCSTLLDH----CLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHIN 67
Y S C + D + + + F + A KLG Y+ N +D+Y +
Sbjct: 94 YEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVE 153
Query: 68 DALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGF 127
A KVFD IS + + WN MISGY G
Sbjct: 154 SARKVFDQISQRKGSD-------------------------------WNVMISGYWKWGN 182
Query: 128 SSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV-HGRIIRSGMDLSNVVLGNSL 186
+A +LF M P + S T +++ K + + R M +VV N++
Sbjct: 183 KEEACKLF------DMMPENDVVS-WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAM 235
Query: 187 IAMYGKVGLVDYSFSVILTMKKIDI----ISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
++ Y + G + + + M ++ + +W ++ AC L + + + +
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
+ F + L+ + + RD+ +++F ++G N + +A I +++ + + +
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFN---ELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 303 LFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLR-ENIRPTEYMVSCLLSSFSIFL 361
LF + + S+I+ YA + A+ F + + +P E + +LS+
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMM 421
+E+G I + K + + +L+ MYA+ G + +A +F+E K +D+VS+NT+
Sbjct: 413 DLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFT 472
Query: 422 GLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVK 481
A NG TL+L ++ EG+ PDR+T +VL ACN + EG +IF S+
Sbjct: 473 AFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----- 527
Query: 482 PGEEHYT 488
P +HY
Sbjct: 528 PLADHYA 534
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 110/295 (37%), Gaps = 74/295 (25%)
Query: 314 LCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
+ SM ++ D+ D L L+ R I P + ++ S F GI ALV
Sbjct: 73 VVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQALV 127
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE-------------------------- 407
KLGF D + + ++ MY K ++ A +F++
Sbjct: 128 EKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEAC 187
Query: 408 ---------------------TKIKDL---------------VSWNTIMMGLAYNGKVSV 431
K+KDL VSWN ++ G A NG
Sbjct: 188 KLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTED 247
Query: 432 TLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGI-KIFFSMETEFGVKPGEEHYTYV 490
L LF +++R G+ P+ T V+ AC++ + D + + + E V+ T +
Sbjct: 248 ALRLFNDMLRLGVRPNETTWVIVISACSFRA--DPSLTRSLVKLIDEKRVRLNCFVKTAL 305
Query: 491 VEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDL----QVIETVAKE 541
++M +K ++ A I + L W ++S GD+ Q+ +T+ K
Sbjct: 306 LDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR 360
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 215/456 (47%), Gaps = 26/456 (5%)
Query: 76 ISHKNSTSWNICLKGLLKSGQLGNACQLFDGM------PVRDVVSWNSMISGYASNGFSS 129
ISH N ++NI + + Q+ A L M P +V+ +S+++GY S
Sbjct: 116 ISH-NLYTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRIS 172
Query: 130 DALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSL 186
DA+ L +M G RP + TF+ L L + A + R+++ G N+V +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ-PNLVTYGVV 231
Query: 187 IAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
+ K G +D +F+++ M+ + +++ +++++ + + H + AL F +M + +
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
P+ T S+L+S N ++ + + N + +A ID F K +L ++ +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 303 LFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
L+ E + D +S+I+ + HD ++A H+F L + ++ P + L++ F
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI----KDLV 414
++ G+++ + + G + V +TL+H + + D+A +F + +++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 415 SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSM 474
++NT++ GL NGK+ + +F+ L R M P T ++ V++G +F S+
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 475 ETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+ GVKP Y ++ + G+ +EA + M
Sbjct: 532 SLK-GVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 167/393 (42%), Gaps = 57/393 (14%)
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALE 133
N ++ + + GL K G + A L + M +VV ++++I DAL
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 134 LFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
LF EM+ G+RP+ T+S SL+S C+ + R + LS+++
Sbjct: 282 LFTEMENKGVRPNVITYS---SLISCLCN----YERWSDASRLLSDMI------------ 322
Query: 194 GLVDYSFSVILTMKKID--IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
+KI+ ++++N+L+ A + G A + +M + PD FT S+
Sbjct: 323 ------------ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 252 LMS-VCSNLRDLDKGKQVFAF-----CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFT 305
L++ C + R LD+ K +F CF YN++++ F K R+++ V LF
Sbjct: 371 LINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLING-----FCKAKRIDEGVELFR 424
Query: 306 EQDR----WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
E + +T T++I + ++A +F + + + P + LL
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWN 417
+E + + + + E + ++ K G ++D +F +K D++ +N
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT 450
T++ G G LF+++ +G PD T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 47 NTYTYLGNRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQ 102
N TY N ++ + I++ +++F ++S + N+ ++ + G ++ NA
Sbjct: 399 NVVTY--NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 103 LFDGMPVRD-----VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLV 157
+F M V D ++++N+++ G NG A+ +F +Q + M P+ +T++I+ +
Sbjct: 457 VFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM---I 512
Query: 158 SSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSL 217
C A +V G DL S+ L K D+I +N++
Sbjct: 513 EGMCKAGKVE-----DGWDLF---------------------CSLSLKGVKPDVIIYNTM 546
Query: 218 MWACHRAGHHELALAHFYKMRDAELLPDQFT 248
+ R G E A A F KMR+ LPD T
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 214/458 (46%), Gaps = 30/458 (6%)
Query: 76 ISHKNSTSWNICLKGLLKSGQLGNACQLFDGM------PVRDVVSWNSMISGYASNGFSS 129
ISH N +++I + + QL A + M P D+V+ NS+++G+ S
Sbjct: 112 ISH-NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLNSLLNGFCHGNRIS 168
Query: 130 DALELFVEMQGAGMRPSSFTFSILTSLV---SSPCHAKQVHGRIIRSGMDLSNVVLGNSL 186
DA+ L +M G +P SFTF+ L + + A + R++ G V G
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG--- 225
Query: 187 IAMYG--KVGLVDYSFSVILTMK--KID--IISWNSLMWACHRAGHHELALAHFYKMRDA 240
I + G K G +D + S++ M+ KI+ ++ +N+++ A + AL F +M +
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDS 300
+ P+ T ++L+ N ++ + + N + SA ID F K +L ++
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 301 VRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSS 356
+L+ E + D +S+I+ + HD ++A H+F L + ++ P + L+
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 357 FSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNET----KIKD 412
F V+ G+++ + + G + V +TL+H + + D+A +F + + D
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF 472
+++++ ++ GL NGKV L +F+ L R M PD T ++ V++G +F
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
S+ + GVKP YT ++ + G+ +EA + M
Sbjct: 526 SLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%)
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELI 440
DA T++ MY+ DDAL++FNE ++ +W T++ LA NG+ +D+F I
Sbjct: 142 DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFI 201
Query: 441 REGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGML 500
EG PD+ AV AC ++EG+ F SM ++G+ E Y V+EML+ G L
Sbjct: 202 EEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHL 261
Query: 501 KEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEI 542
EA+D VE M +++MW ++++C + G L++ + A+ I
Sbjct: 262 DEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELI 303
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 193/436 (44%), Gaps = 60/436 (13%)
Query: 64 GHINDALKVFDDISHKN-----STSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVS 114
G + DAL ++S+++ ++N + GL K+G + +A ++ D M DV +
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSG 174
+NS+ISG G +A+E+ +M P++ T++ +L+S+ C QV
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN---TLISTLCKENQVE-----EA 384
Query: 175 MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHF 234
+L+ V+ ++ D+ ++NSL+ +H +A+ F
Sbjct: 385 TELARVLTSKGILP---------------------DVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 235 YKMRDAELLPDQFTCSTLM-SVCSNLRDLDKG----KQV-FAFCFKVGFVYNSIVSSAAI 288
+MR PD+FT + L+ S+CS + LD+ KQ+ + C + YN++ I
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNMLKQMELSGCARSVITYNTL-----I 477
Query: 289 DLFSKCNRLEDSVRLFTEQD----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
D F K N+ ++ +F E + ++ ++I EDA L + E +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
P +Y + LL+ F ++ I + G E D V TL+ K G ++ A +
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 405 FNETKIKDLV----SWNTIMMGLAYNGKVSVTLDLFKELIREGMA-PDRITLAAVLLA-C 458
++K + ++N ++ GL K + ++LF+E++ + A PD ++ V C
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Query: 459 NYGSFVDEGIKIFFSM 474
N G + E + +
Sbjct: 658 NGGGPIREAVDFLVEL 673
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/494 (19%), Positives = 195/494 (39%), Gaps = 100/494 (20%)
Query: 43 KLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNSTSW---------NICLKGLLK 93
+ GL T+ NR L+L D ++LK+ + ISH + W N+ +K L +
Sbjct: 147 EFGLKPDTHFYNRMLNLLVD----GNSLKLVE-ISHAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 94 SGQLGNACQLFDGMP----VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT 149
+ QL A + + MP V D ++ +++ GY G AL
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL----------------- 244
Query: 150 FSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK- 208
++ +++ G SNV + N ++ + K G V+ + + I M
Sbjct: 245 ---------------RIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 209 ----IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
D ++N+L+ +AGH + A+ M PD +T
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT---------------- 332
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSV----RLFTEQDRWDTALCTSMIS 320
YNS++S K ++++V ++ T +T ++IS
Sbjct: 333 --------------YNSVISG-----LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES 380
+ + E+A L + + I P + L+ + V +++ + G E
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKI----KDLVSWNTIMMGLAYNGKVSVTLDLF 436
D + L+ G +D+AL++ + ++ + ++++NT++ G K ++F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
E+ G++ + +T ++ V++ ++ M E G KP + Y ++ +
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLLTHFCR 552
Query: 497 AGMLKEAIDIVETM 510
G +K+A DIV+ M
Sbjct: 553 GGDIKKAADIVQAM 566
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 380 SDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKEL 439
SD ++++ MY+ G ++DAL +FN ++L +W ++ A NG+ +D F
Sbjct: 214 SDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRF 273
Query: 440 IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGM 499
+EG PD + AC ++EG+ F SM E+G+ P EHY +V+ML++ G
Sbjct: 274 KQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGY 333
Query: 500 LKEAIDIVETMPYTITLDMWRLILSVCVIHGDL 532
L EA+ VE+M + D+W ++++ +HGDL
Sbjct: 334 LDEALRFVESMEPNV--DLWETLMNLSRVHGDL 364
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
L S + +E ++H + F D L + ++ M+ + I DA +F+ KD
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF 472
+ SW+ +M + NG L LF+E+ + G+ P+ T V LAC ++E F
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDL 532
SM+ E G+ P EHY V+ +L K G L EA + +P+ T D W + + +HGD+
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI 421
Query: 533 QVIETVAKEIM 543
+E +E+M
Sbjct: 422 D-LEDYMEELM 431
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 31/130 (23%)
Query: 21 LLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKN 80
L + C + KS+ K VH HFL+ L N + ++ + I DA +VFD + K+
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQG 140
SW++ M+ Y+ NG DAL LF EM
Sbjct: 302 MDSWHL-------------------------------MMCAYSDNGMGDDALHLFEEMTK 330
Query: 141 AGMRPSSFTF 150
G++P+ TF
Sbjct: 331 HGLKPNEETF 340
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
D +PD+ L C+NL+ L+ K+V + F + +++ I +F +C+ +
Sbjct: 229 DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSIT 288
Query: 299 DSVRLF-----TEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTE 347
D+ R+F + D W +C +Y+ + +G+DALHLF + ++P E
Sbjct: 289 DAKRVFDHMVDKDMDSWHLMMC-----AYSDNGMGDDALHLFEEMTKHGLKPNE 337
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 368 QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNG 427
+I A V L S+ VL + MY+ G+ ++A +F + K+L +W I+ A NG
Sbjct: 279 KISASVSHLDLSSNHVL----LEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNG 334
Query: 428 KVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHY 487
+D+F EG PD + AC VDEG+ F SM ++G+ P E Y
Sbjct: 335 FGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDY 394
Query: 488 TYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKEIME 544
+VEM + G L EA++ VE MP +D+W ++++ +HG+L++ + A E++E
Sbjct: 395 VSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCA-EVVE 450
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 205/474 (43%), Gaps = 47/474 (9%)
Query: 54 NRCLDLYSDLGHINDALKVFDDI----SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPV 109
N L ++ LG +D + F D+ + ++NI + + K G + A LF+ M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 110 R----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ 165
R D V++NSMI G+ G D + F EM+ P T++ L + C K
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN-----CFCK- 344
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAG 225
G++ G++ + GN L K +++S+++L+ A + G
Sbjct: 345 -FGKL-PIGLEFYREMKGNGL---------------------KPNVVSYSTLVDAFCKEG 381
Query: 226 HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSS 285
+ A+ + MR L+P+++T ++L+ + +L ++ +VG +N + +
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 286 AAIDLFSKCNRLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLRE 341
A ID R++++ LF + D + A ++I + + AL L
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
I+P + + +E + + + G ++++++ +TL+ Y K G +
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 402 LHIFNETKIKDL----VSWNTIMMGLAYNGKVSVTLDLFKELIRE-GMAPDRITLAAVLL 456
LH+ +E K D+ V++ ++ GL N VS +D F + + G+ + A++
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 457 ACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+ V+ +F M + G+ P YT +++ K G + EA+ + + M
Sbjct: 622 GLCKDNQVEAATTLFEQM-VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 197/457 (43%), Gaps = 33/457 (7%)
Query: 41 FLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS----HKNSTSWNICLKGLLKSGQ 96
F L +T TY N +D + +G ++D + F+++ + ++N + K G+
Sbjct: 290 FRGLVPDTVTY--NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 97 LGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI 152
L + + M +VVS+++++ + G A++ +V+M+ G+ P+ +T+
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY-- 405
Query: 153 LTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
TSL+ + C A ++ +++ G++ NVV +LI + + + M
Sbjct: 406 -TSLIDANCKIGNLSDAFRLGNEMLQVGVEW-NVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 207 KKIDII----SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDL 262
+I S+N+L+ +A + + AL +++ + PD T + +L +
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 263 DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTS----M 318
+ K V + G NS++ + +D + K + + L E D + +
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 319 ISSYATHDLGEDALHLFVLTLRE-NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG 377
I + L A+ F + ++ + + ++ VE + + + G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFN---ETKIK-DLVSWNTIMMGLAYNGKVSVTL 433
D ++L+ K G + +AL + + E +K DL+++ +++ GL++ ++
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKI 470
+E+I EG+ PD + +VL +DE +++
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 216/503 (42%), Gaps = 29/503 (5%)
Query: 7 QTQGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHI 66
+ +G L STL+D + + + L G+ + + +D+Y G +
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 67 NDALKVFDDI----SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSM 118
A V+ + N ++ I +KGL + G++ A ++ + R +V+++S+
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 119 ISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSP---CHAKQVHGRIIRSGM 175
I G+ G L+ +M G P + +L +S HA + +++ +
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 176 DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELAL 231
L NVV+ NSLI + ++ D + V M K D+ ++ ++M G E AL
Sbjct: 493 RL-NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 232 AHFYKMRDAELLPDQFT-CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
F++M L PD C+ + + C +++ G Q+F + + V + I L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 291 FSKCNRLEDSVRLFTE----QDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPT 346
KC+R+ED+ + F + D +MI Y + ++A +F L P
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 347 EYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFN 406
++ L+ ++ I++ +++ + G + +AV L+ ++K I+ + +F
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 407 ETKIK----DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CNYG 461
E + K +VS++ I+ GL G+V ++F + I + PD + A ++ C G
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Query: 462 SFVDEGIKIFFSMETEFGVKPGE 484
V+ + + GVKP +
Sbjct: 791 RLVEAA--LLYEHMLRNGVKPDD 811
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 202/463 (43%), Gaps = 31/463 (6%)
Query: 72 VFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGF 127
V D N ++ + G K G++ A LF M R D+++++++I GY G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 128 SSDALELFVEMQGAGMRPSSFTFS-ILTSLVSSP--CHAKQVHGRIIRSGMDLSNVVLGN 184
+LF + G++ FS + V S A V+ R++ G+ NVV
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS-PNVVTYT 395
Query: 185 SLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHELALAHFYKMRDA 240
LI + G + +F + + K I++++SL+ + G+ A + M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 241 ELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV-----YNSIVSSAAIDLFSKCN 295
PD L+ S +G + A F V + N +V ++ ID + + N
Sbjct: 456 GYPPDVVIYGVLVDGLSK-----QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 296 RLEDSVRLFTEQD----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVS 351
R ++++++F + D A T+++ E+AL LF + + P
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 352 CLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFN---ET 408
L+ +F + +G+Q+ L+ + +D + + ++H+ K I+DA FN E
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 409 KIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEG 467
K++ D+V++NT++ G ++ +F+ L P+ +TL ++ + +D
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 468 IKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
I++ FS+ E G KP Y +++ SK+ ++ + + E M
Sbjct: 691 IRM-FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/543 (20%), Positives = 239/543 (44%), Gaps = 63/543 (11%)
Query: 60 YSDLGHINDALKVFDDIS----HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRD---- 111
Y ++ A KVF+++ +N ++ + GL + ++ A LF M +
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHG 168
V ++ +I + S+AL L EM+ G++P+ T+++L + S C A+++ G
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 169 RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRA 224
+++ G+ + NV+ N+LI Y K G+++ + V+ M+ + ++N L+ ++
Sbjct: 383 QMLEKGL-MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
H+ A+ KM + ++LPD T ++L+ + D ++ + G V +
Sbjct: 442 NVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLR 340
++ ID K R+E++ LF ++ + + T++I Y ++A + L
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
+N P + L+ ++ + + K+G + + L+H K G D
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 401 ALHIFNE-----TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
A F + TK D ++ T + G++ D+ ++ G++PD T ++++
Sbjct: 621 AYSRFQQMLSSGTK-PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 456 LACNYGSF-------------VDEGIK----IFFS-----METEFGVKPGEEHYTYVVEM 493
YG D G + F S +E ++G + G E E+
Sbjct: 680 KG--YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP-----EL 732
Query: 494 LSKAGMLK--EAIDIVETM-PYTITLDM---WRLILSVCVIHGDLQVIETVAKEIMEREP 547
+ + M++ ++++E M +++T + +LIL +C + G+L+V E V + E
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV-GNLRVAEKVFDHMQRNEG 791
Query: 548 QAP 550
+P
Sbjct: 792 ISP 794
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 159/373 (42%), Gaps = 47/373 (12%)
Query: 184 NSLIAMYGKVGLVDYSFSVILTM--KKI--DIISWNSLMWACHRAGHHELALAHFYKMRD 239
N+L+ + GLVD V + M K+ +I ++N ++ + G+ E A + K+ +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 299
A L PD FT ++L+ +DLD +VF G N + + I R+++
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 300 SVRLFT---EQDRWDTALC-TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
++ LF + + + T T +I S + +AL+L I+P + + L+
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI----------- 404
S E ++ + + G + + + L++ Y K G+I+DA+ +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 405 ----FNE-----------------------TKIKDLVSWNTIMMGLAYNGKVSVTLDLFK 437
+NE + D+V++N+++ G +G L
Sbjct: 427 NTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 438 ELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKA 497
+ G+ PD+ T +++ + V+E +F S+E + GV P YT +++ KA
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKA 545
Query: 498 GMLKEAIDIVETM 510
G + EA ++E M
Sbjct: 546 GKVDEAHLMLEKM 558
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 182/456 (39%), Gaps = 65/456 (14%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRI 170
++ ++N M++GY G +A + ++ AG+ P FT+ TSL+ C K +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY---TSLIMGYCQRKDLDSAF 273
Query: 171 -IRSGMDLS----NVVLGNSLIAMYGKVGLVDYSFSVILTMKKID----IISWNSLMWAC 221
+ + M L N V LI +D + + + MK + + ++ L+ +
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLM-SVCSNLRDLDKGKQVFAFCFKVGFVYN 280
+ AL +M + + P+ T + L+ S+CS + +K +++ + G + N
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK-FEKARELLGQMLEKGLMPN 392
Query: 281 SIVSSAAIDLFSKCNRLEDSV--------RLFTEQDRWDTALCTSMISSYATHDLG---- 328
I +A I+ + K +ED+V R + R L S +G
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK 452
Query: 329 --------------------------EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
+ A L L + P ++ + ++ S
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA----LHIFNETKIKDLVSWNT 418
VE + + + G + V+ + L+ Y K G +D+A + ++ + + +++N
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 419 IMMGLAYNGKVSVTLDLFKELIREGMAP----DRITLAAVLLACNYGSFVDEGIKIFFSM 474
++ GL +GK+ L +++++ G+ P D I + +L G F D F M
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL---KDGDF-DHAYSRFQQM 628
Query: 475 ETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+ G KP YT ++ + G L +A D++ M
Sbjct: 629 LSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 206/488 (42%), Gaps = 41/488 (8%)
Query: 64 GHINDALKVFD----DISHKNSTSWNICLKGLLKSGQLGNACQLFDGMP----VRDVVSW 115
G + + VFD I +++ ++ K L G L A M V + S+
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 116 NSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGM 175
N +I + F ++A+E++ M G RPS T+S L + V G +++
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG-LLKEME 250
Query: 176 DLS---NVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHE 228
L NV I + G+ G ++ ++ ++ M D++++ L+ A A +
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 229 LALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAI 288
A F KM+ PD+ T TL+ S+ RDLD KQ ++ K G V + + + +
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 289 DLFSKCNRLE---DSVRLFTEQD------RWDTALCTSMISSYATHDLGEDALHLFVLTL 339
D K D++ + +Q ++T +C + H L +DAL LF
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL----RVHRL-DDALELFGNME 425
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
++PT Y + + ++ + G + V + ++ AK G
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 400 DALHIFNETK----IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
+A IF K + D V++N +M + G++ + L E++ G PD I + +++
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM----- 510
VDE K+F M+ E +KP Y ++ L K G ++EAI++ E M
Sbjct: 546 NTLYKADRVDEAWKMFMRMK-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 511 -PYTITLD 517
P TIT +
Sbjct: 605 PPNTITFN 612
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 218/488 (44%), Gaps = 31/488 (6%)
Query: 9 QGPYTSLSYCSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHIND 68
+G SL S+L+ ++ ++ V + LGL Y C+ + G IN+
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 69 ALKVF----DDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPV----RDVVSWNSMIS 120
A ++ D+ + ++ + + L + +L A ++F+ M D V++ +++
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 121 GYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGR-----IIRSGM 175
++ N + + EM+ G P TF+I LV + C A ++R
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI---LVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 176 DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDI--ISWNSLMWACH--RAGHHELAL 231
L N+ N+LI +V +D + + M+ + + ++ +++ + ++G AL
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 232 AHFYKMRDAELLPDQFTC-STLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDL 290
F KM+ + P+ C ++L S+ RD + KQ+F +G V +S+ + +
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE-AKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 291 FSKCNRLEDSVRLFTEQD----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPT 346
+SK ++++++L +E D + S+I++ D ++A +F+ ++PT
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 347 EYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFN 406
+ LL+ ++ I++ + + G + + +TL K + AL +
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 407 ETK----IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGS 462
+ + D+ ++NTI+ GL NG+V + F ++ ++ + PD +TL +L S
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAS 691
Query: 463 FVDEGIKI 470
+++ KI
Sbjct: 692 LIEDAYKI 699
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 194/456 (42%), Gaps = 43/456 (9%)
Query: 62 DLGHINDALKVFDDISHK-NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWN 116
D+ + LK + + K N ++ IC++ L ++G++ A ++ M DVV++
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 117 SMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMD 176
+I + A E+F +M+ +P T+ L S D
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD--------------NRD 343
Query: 177 LSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYK 236
L +V S + G V D++++ L+ A +AG+ A
Sbjct: 344 LDSVKQFWSEMEKDGHVP---------------DVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 237 MRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK--- 293
MRD +LP+ T +TL+ + LD ++F +G + ID + K
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 294 -CNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSC 352
+ LE ++ T+ + C + + S A +A +F + P +
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF---NETK 409
++ +S ++ I++ + + + G E D ++ ++L++ K +D+A +F E K
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 410 IKD-LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGI 468
+K +V++NT++ GL NGK+ ++LF+ ++++G P+ IT + V +
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 469 KIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
K+ F M + G P Y ++ L K G +KEA+
Sbjct: 629 KMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 198/478 (41%), Gaps = 54/478 (11%)
Query: 49 YTYLGNRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLF 104
YTY+ +D Y G AL+ F+ + K N + N L L K+G+ A Q+F
Sbjct: 434 YTYI--VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 105 DGMP----VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSP 160
G+ V D V++N M+ Y+ G +A++L EM G P + L + +
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 161 CHAKQVHGRIIR-SGMDLS-NVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISW 214
+ +R M L VV N+L+A GK G + + + M + + I++
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 215 NSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
N+L + LAL +KM D +PD FT +T++ + G+ A CF
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII-----FGLVKNGQVKEAMCF- 665
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
++ + D + C L V+ +D + +I+++ ++ + +L
Sbjct: 666 ----FHQMKKLVYPDFVTLCTLLPGVVKASLIEDAY------KIITNF-LYNCADQPANL 714
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK 394
F E ++ +L+ I V ++ A + + D++L ++ K
Sbjct: 715 F----------WEDLIGSILAEAGIDNAVSFSERLVA--NGICRDGDSILVP-IIRYSCK 761
Query: 395 FGIIDDALHIFNETKIKDL------VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+ A +F E KDL ++N ++ GL + + D+F ++ G PD
Sbjct: 762 HNNVSGARTLF-EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
T +L A +DE +++ M T + + V+ L KAG + +A+D+
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTH-ECEANTITHNIVISGLVKAGNVDDALDL 877
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 13/309 (4%)
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
++N L+ A E+A F +++ +PD T + L+ +D+ +++
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF----TEQDRWDTALCT--SMISSYATHD 326
N+I + I K ++D++ L+ +++D TA CT +I +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA-CTYGPLIDGLSKSG 905
Query: 327 LGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAS 386
+A LF L RP + + L++ F + + + K G D S
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 387 TLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIMMGLAYNGKVSVTLDLFKEL-IR 441
LV G +D+ LH F E K D+V +N I+ GL + ++ L LF E+
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 442 EGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLK 501
G+ PD T +++L V+E KI+ ++ G++P + ++ S +G +
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA-GLEPNVFTFNALIRGYSLSGKPE 1084
Query: 502 EAIDIVETM 510
A + +TM
Sbjct: 1085 HAYAVYQTM 1093
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 64 GHINDALKVFDDISHKNSTSWNIC-----LKGLLKSGQLGNACQLFDGM------PVRDV 112
G+++DAL ++ D+ S C + GL KSG+L A QLF+GM P +
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP--NC 926
Query: 113 VSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVHGR 169
+N +I+G+ G + A LF M G+RP T+S+L +V
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 170 IIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK-----KIDIISWNSLMWACHRA 224
+ SG++ +VV N +I GK ++ + + MK D+ ++NSL+ A
Sbjct: 987 LKESGLN-PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLM 253
G E A + +++ A L P+ FT + L+
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 48 TYTYLGNRCLDLYSDLGHINDALKVFDDIS----HKNSTSWNICLKGLLKSGQLGNACQL 103
TY +L LD Y G I++ +++ ++S N+ + NI + GL+K+G + +A L
Sbjct: 822 TYNFL----LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 104 -FDGMPVRD----VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS 158
+D M RD ++ +I G + +G +A +LF M G RP+ ++IL +
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 159 SPCHAK---QVHGRIIRSGM--DLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----I 209
A + R+++ G+ DL + + M VG VD +K+
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM---VGRVDEGLHYFKELKESGLNP 994
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAE-LLPDQFTCSTLM 253
D++ +N ++ ++ E AL F +M+ + + PD +T ++L+
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 46 LNTYTYLGNRCLDLYSDLGHINDALKVFDDIS----HKNSTSWNICLKGLLKSGQLGNAC 101
L TY+ L +D +G +++ L F ++ + + +N+ + GL KS +L A
Sbjct: 961 LKTYSVL----VDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 102 QLFDGMPVR-----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILT-- 154
LF+ M D+ ++NS+I G +A +++ E+Q AG+ P+ FTF+ L
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 155 -SLVSSPCHAKQVHGRIIRSG 174
SL P HA V+ ++ G
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGG 1097
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 214/480 (44%), Gaps = 30/480 (6%)
Query: 58 DLYSDLGHINDALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGM------PVRD 111
DL LG L++ D+ S+NI + + QL A + M P D
Sbjct: 97 DLVISLGERMQNLRISYDL-----YSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--D 149
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVHG 168
+V+ +S+++GY S+A+ L +M +P++ TF+ L L + A +
Sbjct: 150 IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 169 RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHRA 224
R++ G G +++ K G +D + S++ M+K D++ + +++ A
Sbjct: 210 RMVARGCQPDLFTYG-TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVS 284
+ AL F +M + + P+ T ++L+ N ++ + + N +
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLR 340
SA ID F K +L ++ +L+ E + D +S+I+ + HD ++A H+F L +
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 341 ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDD 400
++ P + L+ F VE G+++ + + G + V +TL+ + G D
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 401 ALHIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLL 456
A IF ++ D+++++ ++ GL GK+ L +F+ L + M PD T ++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 457 ACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITL 516
V++G +F S+ + GVKP YT ++ + G+ +EA + M TL
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 177/432 (40%), Gaps = 58/432 (13%)
Query: 130 DALELFVEMQGAGMRPSSFTFSILTS--------------------------------LV 157
DA++LF EM + PS F+ L S L+
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 158 SSPCHAKQ------VHGRIIRSGMDLSNVVLGNSLIAMY--GK-----VGLVDYSFSVIL 204
+ C Q V G++++ G + ++V +SL+ Y GK V LVD F +
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYE-PDIVTLSSLLNGYCHGKRISEAVALVDQMF---V 178
Query: 205 TMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK 264
+ + +++N+L+ A+A +M PD FT T+++ D+D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 265 GKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD----RWDTALCTSMIS 320
+ K + ++ + ID + D++ LFTE D R + S+I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 321 SYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES 380
+ DA L + I P S L+ +F + +++ + K +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIKD----LVSWNTIMMGLAYNGKVSVTLDLF 436
D S+L++ + +D+A H+F KD +V++NT++ G +V ++LF
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 437 KELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
+E+ + G+ + +T ++ D KIF M ++ GV P Y+ +++ L K
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCK 477
Query: 497 AGMLKEAIDIVE 508
G L++A+ + E
Sbjct: 478 YGKLEKALVVFE 489
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 208/506 (41%), Gaps = 76/506 (15%)
Query: 17 YCSTLLDHCLSQKS-VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDD 75
Y +L +C ++S + V +KLG + L+ Y I++A+ + D
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 76 I----SHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGF 127
+ N+ ++N + GL + A L D M R D+ ++ ++++G G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 128 SSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRI-IRSGMD----LSNVVL 182
AL L +M+ + I T+++ + C+ K V+ + + + MD NVV
Sbjct: 236 IDLALSLLKKMEKGKIEADVV---IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 183 GNSLI---AMYGKVGLVDYSFSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMR 238
NSLI YG+ S ++ K +++++++L+ A + G A + +M
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 239 DAELLPDQFTCSTLMS-VCSNLRDLDKGKQVFAF-----CFKVGFVYNSIVSSAAIDLFS 292
+ PD FT S+L++ C + R LD+ K +F CF YN+++ F
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDR-LDEAKHMFELMISKDCFPNVVTYNTLIKG-----FC 406
Query: 293 KCNRLEDSVRLFTE-----------------QDRWDTALC-------TSMISSYATHDLG 328
K R+E+ + LF E Q + C M+S D+
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 329 ---------------EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALV 373
E AL +F + + P Y + ++ VE G + +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIMMGLAYNGKV 429
G + + ++ +T++ + + G+ ++A +F E K + + ++NT++ +G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 430 SVTLDLFKELIREGMAPDRITLAAVL 455
+ + +L KE+ G D T++ V+
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVI 612
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 205/450 (45%), Gaps = 20/450 (4%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVH 167
++V+ +S+++GY + S+A+ L +M G +P++ TF+ L L + A +
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHR 223
R++ G V G ++ K G D +F+++ M++ ++ +N+++ +
Sbjct: 210 DRMVAKGCQPDLVTYG-VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
H + AL F +M + P+ T S+L+S N ++ + + +
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 284 SSAAIDLFSKCNRLEDSVRLFTE--QDRWDTALCT--SMISSYATHDLGEDALHLFVLTL 339
SA ID F K +L ++ +L+ E + D ++ T S+I+ + HD ++A +F +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
++ P + L+ F + VE G+++ + + G + V + L+ + G D
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 400 DALHIFNETK----IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
A IF E +++++NT++ GL NGK+ + +F+ L R M P T ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 456 LACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTIT 515
V++G +F ++ + GVKP Y ++ + G +EA + + M T
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 516 LD---MWRLILSVCVIHGDLQVIETVAKEI 542
L + ++ + GD + + KE+
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 170/394 (43%), Gaps = 26/394 (6%)
Query: 83 SWNICLKGLLKSGQLGNACQLFDGMPVRD----VVSWNSMISGYASNGFSSDALELFVEM 138
++ + + GL K G A L + M V+ +N++I G DAL LF EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 139 QGAGMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
+ G+RP+ T+S SL+S C+ A ++ +I ++ +V ++LI + K
Sbjct: 283 ETKGIRPNVVTYS---SLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVK 338
Query: 193 VGLVDYSFSVILTMKK--ID--IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
G + + + M K ID I++++SL+ + A F M PD T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-- 306
+TL+ + +++G +VF + G V N++ + I + + + +F E
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 307 QDRWDTALCT--SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
D + T +++ + E A+ +F R + PT Y + ++ VE
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIM 420
G + + G + D V +T++ + + G ++A +F E K + + +NT++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAV 454
+G + +L KE+ G A D T+ V
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 47 NTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNST----SWNICLKGLLKSGQLGNACQ 102
N TY N LD G + A+ VF+ + ++NI ++G+ K+G++ +
Sbjct: 465 NIMTY--NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 103 LFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
LF + ++ DVV++N+MISG+ G +A LF EM+ G P+S ++ L
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 213/468 (45%), Gaps = 34/468 (7%)
Query: 17 YCSTLLDHCLSQKS-VNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFD- 74
Y ++ +C ++S ++ V A +KLG + L+ Y I+DA+ + D
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 75 --DISHKNST-SWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGF 127
++ +K T ++ + GL + A L D M R D+V++ ++++G G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 128 SSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRI-----IRSGMDLSNVVL 182
AL L +M+ A ++ + F+ +++ S C + V + + + NVV
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFN---TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 183 GNSLI---AMYGKVGLVDYSFSVILTMKKID--IISWNSLMWACHRAGHHELALAHFYKM 237
NSLI YG+ S +L KKI+ ++++N+L+ A + G A +M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 238 RDAELLPDQFTCSTLMS-VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNR 296
+ PD T + L++ C + R LD+ KQ+F F + N + I+ F KC R
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNR-LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 297 LEDSVRLFTEQDRW----DTALCTSMISSYATHDLGE-DALHLFVLTLRENIRPTEYMV- 350
+ED V LF E + +T T++I + G+ D+ + + N PT+ M
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGF--FQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 351 SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI 410
S LL + ++ + I + K E + + +T++ K G + +A +F I
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI 531
Query: 411 K-DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
K D+V++NT++ GL + DLF+++ +G P+ T ++ A
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 197/474 (41%), Gaps = 80/474 (16%)
Query: 131 ALELFV--EMQGAGMRPSSFTFSILTSLVSSPC------HAKQVHGRIIRSGMDLSNVVL 182
A LFV +QG G P+ +F +L S C A + I+R+ LS+++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSF---FNLCGSGCWERSFASASGDYREILRN--RLSDIIK 63
Query: 183 GNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
+ + ++G ++ + I+ +N L+ A + EL ++ +M+ +
Sbjct: 64 VDDAVDLFG---------DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
D +T S ++ L V A K+G+ + + S+ ++ + R+ D+V
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 303 LFTEQD----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
L + + DT T++I H+ +A+ L + MV
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL-----------VDQMV-------- 215
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE---TKIK-DLV 414
+ G + D V T+V+ K G ID AL++ N+ +IK ++V
Sbjct: 216 ----------------QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 415 SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL-LACNYGSFVDEGIKIFFS 473
+NTI+ L V V +DLF E+ +G+ P+ +T +++ CNYG + D S
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS--RLLS 317
Query: 474 METEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM------PYTITLDMWRLILSVCV 527
E + P + +++ K G L EA + E M P TIT + L+++
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT---YNLLINGFC 374
Query: 528 IHGDLQVIETVAKEIMERE--PQAPFPYLVLAQAYQMMGRWESLVRVRKDMEQK 579
+H L + + K ++ ++ P Y L + R E V + ++M Q+
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQ-TYNTLINGFCKCKRVEDGVELFREMSQR 427
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 210/492 (42%), Gaps = 65/492 (13%)
Query: 63 LGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVS 114
+G + A V+ +IS N + NI + L K G++ + + D+V+
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC------HAKQVHG 168
+N++IS Y+S G +A EL M G G P +T++ ++++ C AK+V
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN---TVINGLCKHGKYERAKEVFA 329
Query: 169 RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIIS----WNSLMWACHRA 224
++RSG+ + SL+ K G V + V M+ D++ ++S+M R+
Sbjct: 330 EMLRSGLSPDSTTY-RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTL---------MSVCSNLRD--LDKGKQVFAFCF 273
G+ + AL +F +++A L+PD + L +SV NLR+ L +G C
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG------CA 442
Query: 274 KVGFVYNSIVSSAAIDLFSKCNR--LEDSVRLFTEQDRW----DTALCTSMISSYATHDL 327
YN+I L C R L ++ +LF E D+ T +I +
Sbjct: 443 MDVVTYNTI-------LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 328 GEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLAST 387
++A+ LF + IR + LL F ++ +I A + + S
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 388 LVHMYAKFGIIDDALHIFNETKIKDL----VSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
LV+ G + +A +++E K++ + N+++ G +G S +++I EG
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKIFFSM-----ETEFGVKPGEEHYTYVVEMLSKAG 498
PD I+ ++ YG +E + F + E + G+ P Y ++ +
Sbjct: 616 FVPDCISYNTLI----YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 499 MLKEAIDIVETM 510
+KEA ++ M
Sbjct: 672 QMKEAEVVLRKM 683
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNT---- 418
+E +H + L D + ++ MY+ +DDAL +F E + WN+
Sbjct: 135 LEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEE-----MPEWNSGTLC 189
Query: 419 -IMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
+M NG +DLF EG P+ V C V EG F +M E
Sbjct: 190 VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYRE 249
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIET 537
+G+ P EHY V +ML+ +G L EA++ VE MP ++D+W ++++ +HGD+++ +
Sbjct: 250 YGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDR 309
Query: 538 VAKEIMER 545
A E++E+
Sbjct: 310 CA-ELVEK 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 285 SAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIR 344
+A I+++S C ++D++++F E W++ M+ + + GE+A+ LF E +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 345 PTEYMVSCLLSSFSIFLPVEVG-IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
P + + + S+ ++ V+ G +Q A+ + G ++ M A G +D+AL+
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 404 IFNETKIKDLVS-WNTIMMGLAYNGKVSVTLDLFKELIR--EGMAPDRITLAAVLLACNY 460
++ V W T+M +G V + D EL+ + D+++ +A L+A
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELG-DRCAELVEKLDATRLDKVS-SAGLVATKA 335
Query: 461 GSFVDE 466
FV +
Sbjct: 336 SDFVKK 341
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 200/493 (40%), Gaps = 67/493 (13%)
Query: 47 NTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNS----TSWNICLKGLLKSGQLGNACQ 102
N TY N + Y LG + +A ++ + + N ++NI + GL +G + +
Sbjct: 274 NRVTY--NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLE 331
Query: 103 LFDGMPV----RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS 158
L D M DVV++N++I G G S +A +L +M+ G++ + T +I +
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
Query: 159 SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLM 218
+ V ++ L+ M+G FS DI+++++L+
Sbjct: 392 KEEKREAVTRKV-------------KELVDMHG--------FSP-------DIVTYHTLI 423
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV 278
A + G AL +M + + T +T++ R LD+ + K GF+
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD----TALCTSMISSYATHDLGEDALHL 334
+ + I F + ++E ++ ++ E + + S+I H E A+
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK 394
F + P + + ++ + VE + + K F+ D + L++ K
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 395 FGIIDDALHIFN---ETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT- 450
G+ + AL+ FN E + D V++NT++ + K+ DL E+ +G+ PDR T
Sbjct: 604 EGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 451 --LAAVLLACNYGSFVDEGIKIF----------FSMETEFGVKPGEEH---------YTY 489
++L+ S DE +K F +ETE E Y+
Sbjct: 664 NSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSD 723
Query: 490 VVEMLSKAGMLKE 502
V++ L G LKE
Sbjct: 724 VIDELCSRGRLKE 736
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 196/468 (41%), Gaps = 58/468 (12%)
Query: 66 INDALKVFDDISH----KNSTSWNICLKGLLKSGQLGNACQLFDGMPVR-----DVVSWN 116
I+ A +VFDD+ N ++N+ + G G+L +A + + M D V++N
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 117 SMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMD 176
+++ + G SD EL ++M+ G+ P+ T+
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY-------------------------- 278
Query: 177 LSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI----DIISWNSLMWACHRAGHHELALA 232
N+L+ Y K+G + +F ++ MK+ D+ ++N L+ AG L
Sbjct: 279 -------NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLE 331
Query: 233 HFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFS 292
M+ +L PD T +TL+ C L + +++ G N + + ++
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
Query: 293 KCNRLEDSVRLFTEQDRW-----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTE 347
K + E R E D ++I +Y AL + ++ I+
Sbjct: 392 KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 348 YMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE 407
++ +L + ++ + K GF D V TL+ + + ++ AL +++E
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE 511
Query: 408 ---TKIKDLVS-WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CNYGS 462
KI VS +N+++ GL ++GK + ++ F EL G+ PD T +++L C G
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 463 FVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
V++ + F++ + KP ++ L K GM ++A++ T+
Sbjct: 572 -VEKAFE-FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 171/400 (42%), Gaps = 57/400 (14%)
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALE 133
N ++ + + GL K G + A L + M DVV +N++I DAL
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 134 LFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
LF EM+ G+RP+ T+S SL+S C +GR + LS+++
Sbjct: 207 LFKEMETKGIRPNVVTYS---SLISCLCS----YGRWSDASQLLSDMI------------ 247
Query: 194 GLVDYSFSVILTMKKID--IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
KKI+ ++++N+L+ A + G A M + PD FT ++
Sbjct: 248 ------------EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 252 LMS-VCSNLRDLDKGKQVFAF-----CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFT 305
L++ C + R LDK KQ+F F CF YN+++ F K R+ED LF
Sbjct: 296 LINGFCMHDR-LDKAKQMFEFMVSKDCFPDLDTYNTLIKG-----FCKSKRVEDGTELFR 349
Query: 306 EQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
E DT T++I ++A +F + + + P S LL
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWN 417
+E +++ + K + D + +T++ K G +DD +F +K ++V++N
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
T++ GL + L K++ +G PD T ++ A
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 204/454 (44%), Gaps = 65/454 (14%)
Query: 76 ISHKNSTSWNICLKGLLKSGQLGNACQLFDGM------PVRDVVSWNSMISGYASNGFSS 129
ISH N ++NI + + Q+ A L M P +V+ +S+++GY S
Sbjct: 41 ISH-NLYTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRIS 97
Query: 130 DALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSL 186
DA+ L +M G RP + TF+ L L + A + R+++ G N+V +
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ-PNLVTYGVV 156
Query: 187 IAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
+ K G +D +F+++ M+ + D++ +N+++ + + H + AL F +M +
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 243 LPDQFTCSTLMS-VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSV 301
P+ T S+L+S +CS R D Q+ + + N + +A ID F K + ++
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSD-ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 302 RLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
+L + + D S+I+ + HD + A +F E+MVS
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-----------EFMVS------ 318
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDL 413
P L +TL+ + K ++D +F E + D
Sbjct: 319 ------------KDCFPDLD------TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CNYGSFVDEGIKIFF 472
V++ T++ GL ++G +FK+++ +G+ PD +T + +L CN G +++ +++F
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK-LEKALEVFD 419
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDI 506
M+ +K YT ++E + KAG + + D+
Sbjct: 420 YMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 192/437 (43%), Gaps = 36/437 (8%)
Query: 108 PVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVH 167
P+ + +N ++S A + L +MQ G+ + +T++I L++ C Q+
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI---LINCFCRRSQIS 62
Query: 168 ------GRIIRSGMDLSNVVLGNSLIAMY--GK-----VGLVDYSFSVILTMKKIDIISW 214
G++++ G + S V L +SL+ Y GK V LVD ++ + D I++
Sbjct: 63 LALALLGKMMKLGYEPSIVTL-SSLLNGYCHGKRISDAVALVD---QMVEMGYRPDTITF 118
Query: 215 NSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
+L+ A+A +M P+ T +++ D+D +
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD----RWDTALCTSMISSYATHDLGED 330
+ ++ + ID K ++D++ LF E + R + +S+IS ++ D
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSF---SIFLPVEVGIQIHALVPKLGFESDAVLAST 387
A L + + I P + L+ +F F+ E ++H + K + D ++
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE---KLHDDMIKRSIDPDIFTYNS 295
Query: 388 LVHMYAKFGIIDDALHIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREG 443
L++ + +D A +F ++ DL ++NT++ G + +V +LF+E+ G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 444 MAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+ D +T ++ + D K+F M ++ GV P Y+ +++ L G L++A
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 504 IDIVETMPYT-ITLDMW 519
+++ + M + I LD++
Sbjct: 415 LEVFDYMQKSEIKLDIY 431
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 171/400 (42%), Gaps = 57/400 (14%)
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALE 133
N ++ + + GL K G A L + M DVV +N++I DAL
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 134 LFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKV 193
LF EM+ G+RP+ T+S SL+S C +GR + LS+++
Sbjct: 282 LFKEMETKGIRPNVVTYS---SLISCLCS----YGRWSDASQLLSDMI------------ 322
Query: 194 GLVDYSFSVILTMKKI--DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
KKI +++++N+L+ A + G A + M + PD FT ++
Sbjct: 323 ------------EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 252 LMS-VCSNLRDLDKGKQVFAF-----CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFT 305
L++ C + R LDK KQ+F F CF YN+++ F K R+ED LF
Sbjct: 371 LVNGFCMHDR-LDKAKQMFEFMVSKDCFPDVVTYNTLIKG-----FCKSKRVEDGTELFR 424
Query: 306 EQDR----WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
E DT T++I ++A +F + + + P S LL
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWN 417
+E +++ + K + D + +T++ K G +DD +F +K ++V++N
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
T++ GL + L K++ +G P+ T ++ A
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 204/468 (43%), Gaps = 40/468 (8%)
Query: 81 STSWNICLKGLLKSGQLGNACQLFDGM----PVRDVVSWNSMISGYASNGFSSDALELFV 136
S + L+ L +L +A LF GM P+ +V +N ++S A + L
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 137 EMQGAGMRPSSFTFSILTSLVSSPCHAKQVH------GRIIRSGMDLSNVVLGNSLIAMY 190
+MQ + +T++IL ++ C Q+ G++++ G + S V L +SL+ Y
Sbjct: 110 KMQRLEIVHGLYTYNIL---INCFCRRSQISLALALLGKMMKLGYEPSIVTL-SSLLNGY 165
Query: 191 --GK-----VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL 243
GK V LVD ++ + D I++ +L+ A+A +M
Sbjct: 166 CHGKRISDAVALVD---QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL 303
P+ T +++ D D + + ++ + ID K ++D++ L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 304 FTEQD----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF-- 357
F E + R + +S+IS ++ DA L + + I P + L+ +F
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 358 -SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF----NETKIKD 412
F+ E +++ + K + D ++LV+ + +D A +F ++ D
Sbjct: 343 EGKFVEAE---KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 413 LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFF 472
+V++NT++ G + +V +LF+E+ G+ D +T ++ + D K+F
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 473 SMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT-ITLDMW 519
M ++ GV P Y+ +++ L G L++A+++ + M + I LD++
Sbjct: 460 QMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 22/269 (8%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPV 109
N +D H++DAL +F ++ K N +++ + L G+ +A QL M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 110 R----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPC---- 161
+ ++V++N++I + G +A +L+ +M + P FT++ SLV+ C
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN---SLVNGFCMHDR 380
Query: 162 --HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI----DIISWN 215
AKQ+ ++ +VV N+LI + K V+ + M D +++
Sbjct: 381 LDKAKQMFEFMVSKDC-FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 216 SLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKV 275
+L+ G + A F +M + PD T S L+ N L+K +VF + K
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 276 GFVYNSIVSSAAIDLFSKCNRLEDSVRLF 304
+ + + I+ K +++D LF
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/522 (21%), Positives = 218/522 (41%), Gaps = 43/522 (8%)
Query: 18 CSTLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS 77
CST+L C + + K A G T N L ++ G +AL V ++
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 78 HK----NSTSWNICLKGLLKSGQLGNACQLFDGMPVRDV----VSWNSMISGYASNGFSS 129
+S ++N + +++G A + + M + V +++ ++I Y G
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 130 DALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRI--IRSGMDLSNVVLGNSLI 187
+AL+LF M+ AG P++ T++ + SL+ + ++ + ++S N N+++
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 188 AMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELL 243
A+ G G+ + V MK + D ++N+L+ A R G A + +M A
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK------CNRL 297
T + L++ + D G+ V + GF S + ++K R+
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
E+ ++ W L T +++++ L + F L + +P + + +LS F
Sbjct: 584 ENRIKEGQIFPSW-MLLRTLLLANFKCRALA-GSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFG---IIDDALHIFNETKIK-DL 413
+ + I + + G D V ++L+ MY + G ++ L ++++K DL
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVD--EGIKIF 471
VS+NT++ G G + + + E+ G+ P T Y +FV + +F
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT---------YNTFVSGYTAMGMF 752
Query: 472 FSME------TEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
+E + +P E + VV+ +AG EA+D V
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/511 (17%), Positives = 192/511 (37%), Gaps = 119/511 (23%)
Query: 86 ICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGA 141
I ++ L + Q A +L D +P++ DV ++ +++ Y+ G A++LF M+
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 142 GMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFS 201
G P+ T+ N ++ ++GK+G
Sbjct: 240 GPSPTLVTY---------------------------------NVILDVFGKMGR------ 260
Query: 202 VILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
SW + L +MR L D+FTCST++S C+
Sbjct: 261 -----------SWRKI-------------LGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR----WDTALCTS 317
L + K+ FA G+ ++ +A + +F K +++ + E + D+
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 318 MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG 377
++++Y ++A + + ++ + P
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMP-------------------------------- 384
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIMMGLAYNGKVSVTL 433
+A+ +T++ Y K G D+AL +F K + + ++N ++ L + + +
Sbjct: 385 ---NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 434 DLFKELIREGMAPDRITLAAVLLAC-NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVE 492
+ ++ G +P+R T +L C N G +D+ + F G +P + + ++
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKG--MDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Query: 493 MLSKAGMLKEAIDIVETMP---YTITLDMWRLILSVCVIHGDLQVIETVAKEIMER--EP 547
+ G +A + M + + + +L+ GD + E V ++ + +P
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 548 QAPFPYLVLAQAYQMMGRWESLVRVRKDMEQ 578
Y ++ Q Y G + + R+ +++
Sbjct: 560 TET-SYSLMLQCYAKGGNYLGIERIENRIKE 589
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 91/494 (18%), Positives = 201/494 (40%), Gaps = 52/494 (10%)
Query: 54 NRCLDLYSDLGHI-NDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMP 108
N LD++ +G L V D++ K + + + L + G L A + F +
Sbjct: 249 NVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 109 V----RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAK 164
V++N+++ + G ++AL + EM+ S T++ L + +K
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Query: 165 QVHGRI---IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII----SWNSL 217
+ G I + G+ + N + ++I YGK G D + + +MK+ + ++N++
Sbjct: 369 EAAGVIEMMTKKGV-MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 218 MWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK-GKQVFAFCFKVG 276
+ + + M+ P++ T +T++++C N + +DK +VF G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN-KGMDKFVNRVFREMKSCG 486
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALC----TSMISSYATHDLGEDAL 332
F + + I + +C D+ +++ E R C +++++ A
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSI------FLPVEVGIQIHALVPKLGFESDAVLAS 386
++ + +PTE S +L ++ +E I+ + P +LA+
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606
Query: 387 TLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
A + A +F + K D+V +N+++ N + + + +G++
Sbjct: 607 FKCRALAG---SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 446 PDRITLAAVLLACNYGSFVD---------EGIKIFFSMETEFGVKPGEEHYTYVVEMLSK 496
PD +T Y S +D + +I ++E +KP Y V++ +
Sbjct: 664 PDLVT---------YNSLMDMYVRRGECWKAEEILKTLEKS-QLKPDLVSYNTVIKGFCR 713
Query: 497 AGMLKEAIDIVETM 510
G+++EA+ ++ M
Sbjct: 714 RGLMQEAVRMLSEM 727
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 204/499 (40%), Gaps = 58/499 (11%)
Query: 52 LGNRCLDLYSDLGHINDALKVFDDIS----HKNSTSWNICLKGLLKSGQLGNACQLFDGM 107
L N C+D + +G ++ A K F +I + ++ + L K+ +L A ++F+ +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 108 PVRDVV----SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHA 163
V ++N+MI GY S G +A L + G PS
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS----------------- 342
Query: 164 KQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK---IDIISWNSLMWA 220
V+ N ++ K+G VD + V MKK ++ ++N L+
Sbjct: 343 ----------------VIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDM 386
Query: 221 CHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF-AFCFKVGFVY 279
RAG + A M+ A L P+ T + ++ + LD+ +F +KV
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTP 445
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTE----QDRWDTALCTSMISSYATHDLGEDALHLF 335
+ I + ID K R++D+ +++ + R ++ + TS+I ++ H ED ++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 336 VLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKF 395
+ +N P +++ + E G + + F DA S L+H K
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 396 GIIDDALHIFNETK----IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
G ++ +F K + D ++N ++ G GKV+ L +E+ +G P +T
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM- 510
+V+ +DE +F +++ ++ Y+ +++ K G + EA I+E +
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 511 --PYTITLDMWRLILSVCV 527
T L W +L V
Sbjct: 685 QKGLTPNLYTWNSLLDALV 703
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 33/320 (10%)
Query: 46 LNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNAC 101
LNTY +D G +F++I + ++ S++I + GL+K+G
Sbjct: 520 LNTY-------MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 102 QLFDGMP----VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSL 156
+LF M V D ++N +I G+ G + A +L EM+ G P+ T+ S++ L
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 157 --VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI--LTMKKI--D 210
+ A + ++L NVV+ +SLI +GKVG +D ++ ++ L K + +
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIEL-NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
+ +WNSL+ A +A AL F M++ + P+Q T L++ +R +K +
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW-------DTALCTSMISSYA 323
K G ++I + I +K + ++ LF DR+ D+A +MI +
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF---DRFKANGGVPDSACYNAMIEGLS 808
Query: 324 THDLGEDALHLFVLTLRENI 343
+ DA LF T R +
Sbjct: 809 NGNRAMDAFSLFEETRRRGL 828
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 195/464 (42%), Gaps = 61/464 (13%)
Query: 63 LGHINDALKVFDDI---SHKNSTSWNICLKGLLKSGQLGNACQLFDGMP----VRDVVSW 115
+G +++ALKVF+++ + N +++NI + L ++G+L A +L D M +V +
Sbjct: 356 MGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 116 NSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSL--VSSPCHAKQVHGRIIR 172
N M+ + +A +F EM P TF S++ L V A +V+ +++
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 173 SGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHE 228
S +N ++ SLI + G + + M D+ N+ M +AG E
Sbjct: 476 SDCR-TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 229 LALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAI 288
A F +++ +PD + S L+ ++ ++F + G V ++ + I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 289 DLFSKCNRLEDSVRLFTEQDR--WDTALCT--SMISSYATHDLGEDALHLFVLTLRENIR 344
D F KC ++ + +L E ++ + T S+I A D ++A LF + I
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI- 653
Query: 345 PTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHI 404
E + V+ S+L+ + K G ID+A I
Sbjct: 654 ----------------------------------ELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 405 FNETKIK----DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CN 459
E K +L +WN+++ L +++ L F+ + P+++T ++ C
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 460 YGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
F +F+ + G+KP YT ++ L+KAG + EA
Sbjct: 740 VRKF--NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 184/451 (40%), Gaps = 32/451 (7%)
Query: 46 LNTYTYLGNRCLDLYSDLGHINDALKVFDDISH----KNSTSWNICLKGLLKSGQLGNAC 101
L+TY L +D+ G ++ A ++ D + N + NI + L KS +L AC
Sbjct: 377 LSTYNIL----IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 102 QLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLV 157
+F+ M + D +++ S+I G G DA +++ +M + R +S + TSL+
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY---TSLI 489
Query: 158 SSP-CHAKQVHGRIIRSGMDLSN----VVLGNSLIAMYGKVGLVDYSFSVILTMKK---- 208
+ H ++ G I M N + L N+ + K G + ++ +K
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQV 268
D S++ L+ +AG FY M++ + D + ++ ++K Q+
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD----RWDTALCTSMISSYAT 324
GF + + ID +K +RL+++ LF E + + +S+I +
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 325 HDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVL 384
++A + +++ + P Y + LL + + + + +L + V
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 385 ASTLVHMYAKFGIIDDALHIFNETKIKDL----VSWNTIMMGLAYNGKVSVTLDLFKELI 440
L++ K + A + E + + + +S+ T++ GLA G ++ LF
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 441 REGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
G PD A++ + G+ + +F
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 121/306 (39%), Gaps = 10/306 (3%)
Query: 213 SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFC 272
S+NSL+ R + + +M A P TC ++ C L +G V
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 273 FKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWD----TALCTSMISSYATHDLG 328
K F + I FS N + + LF + L T++I +A
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 329 EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
+ AL L ++ + + + SF V++ + + G + D V +++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 389 VHMYAKFGIIDDALHIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
+ + K +D+A+ +F ++ ++NT++MG GK L + +G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 445 APDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAI 504
P I +L VDE +K+F M+ + P Y +++ML +AG L A
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 505 DIVETM 510
++ ++M
Sbjct: 398 ELRDSM 403
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 14/245 (5%)
Query: 344 RPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALH 403
RP + L+ +FS ++ + + + +LG+E L +TL+ +AK G +D AL
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 404 IFNETKIK----DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACN 459
+ +E K D+V +N + GKV + F E+ G+ PD +T +++
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 460 YGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE------TMPYT 513
+ +DE +++F +E V P Y ++ AG EA ++E ++P
Sbjct: 285 KANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 514 ITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESLVRVR 573
I + IL+ G + V +E+ + Y +L G+ ++ +R
Sbjct: 344 IA---YNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 574 KDMEQ 578
M++
Sbjct: 401 DSMQK 405
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 201/476 (42%), Gaps = 57/476 (11%)
Query: 88 LKGLLKSGQLGNACQLFDGM----PVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGM 143
L+ ++++G+L + + M V D++ ++I G+ G + A ++ ++G+G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 144 RPSSFTFSILTSLVSSPCHAKQVHGRI-IRSGMDLS-NVVLGNSLIAMYGKVGLVDYSFS 201
P T++++ +S C A +++ + + M +S +VV N+++ G + +
Sbjct: 169 VPDVITYNVM---ISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 202 VILTMKK----IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS-VC 256
V+ M + D+I++ L+ A R A+ +MRD PD T + L++ +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR--WDTAL 314
R LD+ + G N I + + R D+ +L + R + ++
Sbjct: 286 KEGR-LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 315 CT--SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHAL 372
T +I+ L A+ + + +P + LL F ++ I+
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 373 VPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD----LVSWNTIMMGLAYNGK 428
+ G D V +T++ K G ++DA+ I N+ K L+++NT++ GLA GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMET------------ 476
+ L E+ + + PD IT ++++ + VDE IK F E
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 477 ----------------------EFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
G KP E YT ++E L+ GM KEA++++ +
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 169/415 (40%), Gaps = 61/415 (14%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHKNS----TSWNICLKGLLKSGQLGNACQLFDGMPV 109
N L D G + A++V D + ++ ++ I ++ + +G+A +L D M
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 110 R----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSI-LTSLVSSP--CH 162
R DVV++N +++G G +A++ +M +G +P+ T +I L S+ S+
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLM 218
A+++ ++R G S VV N LI + GL+ + ++ M + + +S+N L+
Sbjct: 328 AEKLLADMLRKGFSPS-VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF-----AFCF 273
+ + A+ + +M PD T +T+++ ++ ++ C
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALH 333
V YN++ ID +K + +++L E D
Sbjct: 447 PVLITYNTV-----IDGLAKAGKTGKAIKLLDEMRAKD---------------------- 479
Query: 334 LFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYA 393
++P S L+ S V+ I+ ++G +AV ++++
Sbjct: 480 ---------LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 394 KFGIIDDALH----IFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGM 444
K D A+ + N + S+ ++ GLAY G L+L EL +G+
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 316 TSMISSYATHDL-GEDALHLFVLT--LRENIRPTEYMV-----------SCLLSSFSIFL 361
+S+ SS+A D+ + L V T L E + E MV + L+ F
Sbjct: 92 SSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLG 151
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK-DLVSWNTIM 420
+I ++ G D + + ++ Y K G I++AL + + + D+V++NTI+
Sbjct: 152 KTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTIL 211
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGV 480
L +GK+ +++ +++ PD IT ++ A S V +K+ M + G
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR-DRGC 270
Query: 481 KPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
P Y +V + K G L EAI + MP
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 211/491 (42%), Gaps = 61/491 (12%)
Query: 76 ISHKNSTSWNICLKGLLKSGQLGNACQLFDGM------PVRDVVSWNSMISGYASNGFSS 129
+SH N ++NI + L + QL A + M P +V+ NS+++G+ S
Sbjct: 96 VSH-NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP--SIVTLNSLLNGFCHGNRIS 152
Query: 130 DALELFVEMQGAGMRPSSFTFSILTSLV---SSPCHAKQVHGRIIRSGMDLSNVVLGNSL 186
+A+ L +M G +P + TF+ L + + A + R++ G V G ++
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG-AV 211
Query: 187 IAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHELALAHFYKMRDAEL 242
I K G D + +++ M+K D++ +++++ + + H + AL F +M + +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 243 LPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVR 302
PD FT S+L+S N ++ + + N + ++ ID F+K +L ++ +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 303 LFTE--QDRWDTALCT--SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFS 358
LF E Q D + T S+I+ + HD ++A +F L + ++ P + L++ F
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 359 IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI----KDLV 414
V G+++ + + G + V +TL+H + + D+A +F + +++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 415 SWNTIMMGLAYNGK-----------------------------------VSVTLDLFKEL 439
++NT++ GL NGK V DLF L
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 440 IREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGM 499
+G+ PD I ++ +E +F M+ E G P Y ++ + G
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK-EDGPLPDSGTYNTLIRAHLRDGD 570
Query: 500 LKEAIDIVETM 510
+ ++++ M
Sbjct: 571 KAASAELIKEM 581
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 173/394 (43%), Gaps = 26/394 (6%)
Query: 83 SWNICLKGLLKSGQLGNACQLFDGMPV----RDVVSWNSMISGYASNGFSSDALELFVEM 138
++ + GL K G+ A L + M DVV ++++I DAL LF EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 139 QGAGMRPSSFTFSILTSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
G+RP FT+S SL+S C+ A ++ ++ ++ NVV NSLI + K
Sbjct: 267 DNKGIRPDVFTYS---SLISCLCNYGRWSDASRLLSDMLERKIN-PNVVTFNSLIDAFAK 322
Query: 193 VGLVDYSFSVILTM--KKID--IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
G + + + M + ID I+++NSL+ + A F M + LPD T
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 249 CSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE-- 306
+TL++ + + G ++F + G V N++ + I F + + +++ +F +
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 307 QDRWDTALCT--SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVE 364
D + T +++ + E A+ +F + + P Y + + VE
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 365 VGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIM 420
G + + G + D + +T++ + K G+ ++A +F + K + D ++NT++
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 421 MGLAYNGKVSVTLDLFKELIREGMAPDRITLAAV 454
+G + + +L KE+ A D T V
Sbjct: 563 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 47 NTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNST----SWNICLKGLLKSGQLGNACQ 102
N TY N LD G + A+ VF+ + ++NI +G+ K+G++ +
Sbjct: 449 NIMTY--NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 103 LFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
LF + ++ DV+++N+MISG+ G +A LF++M+ G P S T++ L
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 184/425 (43%), Gaps = 17/425 (4%)
Query: 101 CQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL---V 157
C++ P+ +V + +++ A + L+ +M+ G+ ++F+IL
Sbjct: 68 CEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 127
Query: 158 SSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI----DIIS 213
S A + G++++ G S V LG SL+ + + + S++ +M +++
Sbjct: 128 SRLSLALALLGKMMKLGFRPSIVTLG-SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 186
Query: 214 WNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCF 273
+N+++ + AL FY M + D T +TL+S SN ++
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 274 KVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTA----LCTSMISSYATHDLGE 329
K N I +A ID F K L ++ L+ E R S+I+ + H
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
DA ++F L + + P + L++ F VE G+++ + G DA +TL+
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 390 HMYAKFGIIDDALHIFNET----KIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
H Y + G ++ A +FN D+V++N ++ L NGK+ L + ++L + M
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 446 PDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID 505
D IT ++ + E +F S+ T GVKP Y ++ L + G+ +EA
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSL-TRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 506 IVETM 510
+ M
Sbjct: 486 LCRRM 490
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 57 LDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPVR-- 110
+D + G++ +A ++ ++ + N ++N + G G LG+A +FD M +
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 111 --DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH------ 162
DVV++N++I+G+ + D ++LF EM G+ +FT++ +L+ C
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN---TLIHGYCQAGKLNV 377
Query: 163 AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLM 218
A++V R++ G+ ++V N L+ G ++ + ++ ++K +DII++N ++
Sbjct: 378 AQKVFNRMVDCGVS-PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
R + A F + + PD T++S
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 169/352 (48%), Gaps = 16/352 (4%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVH 167
D+V+ NS+++G+ SDA+ L +M G +P + TF+ L L + A +
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHR 223
R+++ G V G +++ K G D + +++ M+ + +++ +++++ + +
Sbjct: 207 DRMVQRGCQPDLVTYG-AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
H + AL F +M + + P+ T S+L+S N ++ + + N +
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 284 SSAAIDLFSKCNRLEDSVRLFTE--QDRWDTALCT--SMISSYATHDLGEDALHLFVLTL 339
SA ID F K +L + +L+ E + D + T S+I+ + D +A + L +
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
R++ P + L++ F V+ G+++ + + G + V +TL+H + + D
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 400 DALHIFNETKI----KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
+A +F + +++++N ++ GL NGK++ + +F+ L R M PD
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 83 SWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEM 138
++ + GL K G A L + M +VV ++++I DAL LF EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDY 198
+ G+RP+ T+S SL+S C+ +GR + LS+++
Sbjct: 280 ENKGVRPNVITYS---SLISCLCN----YGRWSDASRLLSDMI----------------- 315
Query: 199 SFSVILTMKKI--DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVC 256
+KI +++++++L+ A + G A + +M + P+ FT S+L++
Sbjct: 316 -------ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 257 SNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTE 306
L L + KQ+ + + N + + I+ F K R++ + LF E
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 198/453 (43%), Gaps = 62/453 (13%)
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELF 135
N S+NI + + + G++ A L M ++ DV+S++++++GY G +L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 136 VEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
M+ G++P+S+ + + L+ C A++ +IR G+ L + V+ +LI + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCK 363
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
G DI RA A FY+M ++ PD T + +
Sbjct: 364 RG---------------DI-----------RA-----ASKFFYEMHSRDITPDVLTYTAI 392
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDT 312
+S + D+ + ++F F G +S+ + I+ + K ++D+ R+ +
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV---HNHMIQ 449
Query: 313 ALCTSMISSYAT----------HDLGEDALH-LFVLTLRENIRPTEYMVSCLLSSFSIFL 361
A C+ + +Y T D + LH ++ + L+ NI +V+ L S +I
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI-- 507
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDL----VSWN 417
E +++ G +D V +TL+ Y K G +D A I E K L V++N
Sbjct: 508 --EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
+M G +G + L ++ +G+AP+ T +++ + + I+ M +
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
GV P + Y +V+ KA +KEA + + M
Sbjct: 626 -GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 198/453 (43%), Gaps = 62/453 (13%)
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELF 135
N S+NI + + + G++ A L M ++ DV+S++++++GY G +L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 136 VEMQGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGK 192
M+ G++P+S+ + + L+ C A++ +IR G+ L + V+ +LI + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCK 363
Query: 193 VGLVDYSFSVILTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTL 252
G DI RA A FY+M ++ PD T + +
Sbjct: 364 RG---------------DI-----------RA-----ASKFFYEMHSRDITPDVLTYTAI 392
Query: 253 MSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDT 312
+S + D+ + ++F F G +S+ + I+ + K ++D+ R+ +
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV---HNHMIQ 449
Query: 313 ALCTSMISSYAT----------HDLGEDALH-LFVLTLRENIRPTEYMVSCLLSSFSIFL 361
A C+ + +Y T D + LH ++ + L+ NI +V+ L S +I
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI-- 507
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDL----VSWN 417
E +++ G +D V +TL+ Y K G +D A I E K L V++N
Sbjct: 508 --EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
+M G +G + L ++ +G+AP+ T +++ + + I+ M +
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
GV P + Y +V+ KA +KEA + + M
Sbjct: 626 -GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 221/541 (40%), Gaps = 72/541 (13%)
Query: 42 LKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHKNST----SWNICLKGLLKSGQL 97
L GL+ N +D + G+ +ALK+F + K T S+ + L GL K+ +
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 98 GNACQLFDGMPVRDV----VSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSIL 153
A + M V +++ MI G NGF +A+ L EM G+ P T+S
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS-- 482
Query: 154 TSLVSSPCH------AKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSV----I 203
+L++ C AK++ RI R G+ N ++ ++LI ++G + + + I
Sbjct: 483 -ALINGFCKVGRFKTAKEIVCRIYRVGLS-PNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 204 LTMKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLD 263
L D ++N L+ + +AG A M +LP+ + L++ N +
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 264 KGKQVFAFCFKVG-----FVYNSIVSS---------------------AAIDL------- 290
K VF KVG F Y S++ AA+D
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 291 --FSKCNRLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLT---LRE 341
K L +V LF E + D+ TS+IS G+ + + R
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK--GKTVIAILFAKEAEARG 718
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
N+ P + M +C + + GI + LG D V + ++ Y++ G I+
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 402 LHIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
+ N+ +L ++N ++ G + VS + L++ +I G+ PD++T +++L
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Query: 458 CNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM-PYTITL 516
+ ++ G+KI + GV+ + ++ G + A D+V+ M I+L
Sbjct: 839 ICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897
Query: 517 D 517
D
Sbjct: 898 D 898
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 192/483 (39%), Gaps = 30/483 (6%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPV 109
N L Y G A+++ D + K + ++N+ + L +S ++ L M
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 110 RDV----VSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ 165
R + V++N++I+G+++ G A +L EM G+ P+ TF+ L S + K+
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 166 VHGRII---RSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLM 218
G+ S V G L+ K D + + MK+ + I++ ++
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYG-VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 219 WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV 278
+ G + A+ +M + PD T S L++ + K++ ++VG
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 279 YNSIVSSAAIDLFSKCNRLEDSVRLFT----EQDRWDTALCTSMISSYATHDLGEDALHL 334
N I+ S I + L++++R++ E D +++S +A
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK 394
+ I P CL++ + + + K+G +L+ K
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 395 FGIIDDALHIFNE----TKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRIT 450
G + +A D V +NT++ + +G ++ + LF E+++ + PD T
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 451 LAAVLLA-CNYGSFVDEGIKIFFSMETEF--GVKPGEEHYTYVVEMLSKAGMLKEAIDIV 507
+++ C G V I I F+ E E V P + YT V+ + KAG K I
Sbjct: 691 YTSLISGLCRKGKTV---IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747
Query: 508 ETM 510
E M
Sbjct: 748 EQM 750
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 189/452 (41%), Gaps = 61/452 (13%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSG 174
++ +I Y G D+LE+F M G PS +T C+A + G +++SG
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYT-----------CNA--ILGSVVKSG 212
Query: 175 MDLS---------------NVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWN 215
D+S +V N LI + G + S ++ M+K I+++N
Sbjct: 213 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 272
Query: 216 SLM-WACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFK 274
+++ W C + G + A+ M+ + D T + L+ + KG + K
Sbjct: 273 TVLHWYCKK-GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 275 VGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGED 330
N + + I+ FS ++ + +L E + + ++I + + ++
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVH 390
AL +F + + + P+E LL ++ + + + G + + ++
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 391 MYAKFGIIDDALHIFNETKI----KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAP 446
K G +D+A+ + NE D+V+++ ++ G G+ ++ + R G++P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 447 DRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY--VVEMLSKAGMLKEAI 504
+ I + ++ C + E I+I+ +M E + +H+T+ +V L KAG + EA
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR---DHFTFNVLVTSLCKAGKVAEAE 568
Query: 505 DIVETM------PYTITLDMWRLILSVCVIHG 530
+ + M P T++ D C+I+G
Sbjct: 569 EFMRCMTSDGILPNTVSFD--------CLING 592
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 205/472 (43%), Gaps = 38/472 (8%)
Query: 60 YSDLGHINDALKVFDDISH----KNSTSWNICLKGLLKSGQLGNACQLFDGM----PVRD 111
+ + I+ AL + D++ NS + + L K ++ A QL + M V D
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTS---LVSSPCHAKQVHG 168
++N +I G ++A ++ M G P T+ L + + AK +
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 169 RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK-----IDIISWNSLMWACHR 223
RI + +V+ N+LI + G +D + +V+ M D+ ++NSL++ +
Sbjct: 347 RIPKP-----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
G LAL + MR+ P+ ++ + L+ L +D+ V G N++
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTL 339
+ I F K +R+ ++V +F E R D S+IS D + AL L +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFES---DAVLASTLVHMYAKFG 396
E + + L+++F ++ + LV ++ F+ D + ++L+ + G
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIK---EARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 397 IIDDALHIFNETKIKD-----LVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITL 451
+D A +F E ++D +S N ++ GL +G V ++ KE++ G PD +T
Sbjct: 579 EVDKARSLF-EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+++ +++G+ +F ++ E G+ P + ++ L K G + +A
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 142/342 (41%), Gaps = 21/342 (6%)
Query: 185 SLIAMYGKVGLVDYSFSVILTMKKI-----DIISWNSLMWACHRAGHHELALAHFYKMRD 239
S++ Y K G + ++L M+ + S+N ++ H++A FY M
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 299
++ P FT +M + ++D + K G V NS++ I SKCNR+ +
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 300 SVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
+++L E D +I D +A + L P + L++
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK-----I 410
V+ + +PK + V+ +TL+H + G +DDA + ++ +
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 411 KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CNYGSFVDEGIK 469
D+ ++N+++ G G V + L++ ++ +G P+ + ++ C G +DE
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK-IDEAYN 445
Query: 470 IFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
+ M + G+KP + ++ K + EA++I MP
Sbjct: 446 VLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 166/416 (39%), Gaps = 28/416 (6%)
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHG----- 168
S+N ++ S A +F +M + P+ FTF + ++ + C ++
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV---VMKAFCAVNEIDSALSLL 240
Query: 169 RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI----DIISWNSLMWACHRA 224
R + + N V+ +LI K V+ + ++ M + D ++N ++ +
Sbjct: 241 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 300
Query: 225 GHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFV-YNSIV 283
A +M PD T LM+ + +D K +F K V +N+++
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLI 360
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQDR-----WDTALCTSMISSYATHDLGEDALHLFVLT 338
F RL+D+ + ++ D S+I Y L AL +
Sbjct: 361 HG-----FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 339 LRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGII 398
+ +P Y + L+ F ++ + + G + + V + L+ + K I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 399 DDALHIFNETKIK----DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAV 454
+A+ IF E K D+ ++N+++ GL ++ L L +++I EG+ + +T +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 455 LLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+ A + E K+ M + G E Y +++ L +AG + +A + E M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 206/467 (44%), Gaps = 40/467 (8%)
Query: 69 ALKVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGM----PVRDVVSWNSMISGYAS 124
A + F D K T G L S + +A LF M P+ +V + +++ A+
Sbjct: 31 AARAFSDYREKLRT-------GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATAN 83
Query: 125 NGFSSDALELFVEMQGAGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVV 181
+ +M+ G+ ++F+IL S A V G++++ G + S V
Sbjct: 84 LRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVT 143
Query: 182 LGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHELALAHFYKM 237
G SL+ + V + +FS+++ M K +++ +N+L+ + G +AL +M
Sbjct: 144 FG-SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 238 RDAELLPDQFTCSTLMS-VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNR 296
L D T +TL++ +C + R D + + K + + +A ID+F K
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM-MKRSINPDVVTFTALIDVFVKQGN 261
Query: 297 LEDSVRLFTE--QDRWDTALCT--SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSC 352
L+++ L+ E Q D T S+I+ H DA F L + P +
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF----NET 408
L+S F F V+ G+++ + GF +D +TL+H Y + G + AL IF +
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 409 KIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE-----GMAPDRITLAAVLLACNYGSF 463
D+++ ++ GL NG++ L F ++ RE G+ I + + A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDM-RESEKYIGIVAYNIMIHGLCKA----DK 436
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
V++ ++F + E GVKP YT ++ L K G +EA +++ M
Sbjct: 437 VEKAWELFCRLPVE-GVKPDARTYTIMILGLCKNGPRREADELIRRM 482
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/517 (22%), Positives = 224/517 (43%), Gaps = 57/517 (11%)
Query: 10 GPYTSL-SYCSTLLDHCLS---QKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGH 65
GP ++ ++C+ + C ++ + K++ ++ L Y+ L +D Y G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL----IDGYFKAGM 336
Query: 66 INDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNS 117
+ K+F HK + ++ + +KSG L A ++ M + +VV++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 118 MISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDL 177
+I G +G +A ++ ++ GM PS T+S SL+ C +RSG L
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS---SLIDGFCKCGN-----LRSGFAL 448
Query: 178 ----------SNVVLGNSLIAMYGKVGLVDYS--FSVILTMK--KIDIISWNSLMWACHR 223
+VV+ L+ K GL+ ++ FSV + + +++++ +NSL+ R
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSV-------CSNLRDLDKGKQVFAFCFKVG 276
+ AL F M + PD T +T+M V C +++ G Q+F +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNK 567
Query: 277 FVYNSIVSSAAIDLFSKCNRLEDSVRLFTE----QDRWDTALCTSMISSYATHDLGEDAL 332
+ V + I L KC+R+ED+ + F + D +MI Y + ++A
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 333 HLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMY 392
+F L P ++ L+ ++ I++ +++ + G + +AV L+ +
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687
Query: 393 AKFGIIDDALHIFNETKIK----DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+K I+ + +F E + K +VS++ I+ GL G+V ++F + I + PD
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 449 ITLAAVLLA-CNYGSFVDEGIKIFFSMETEFGVKPGE 484
+ A ++ C G V+ + + GVKP +
Sbjct: 748 VAYAILIRGYCKVGRLVEAA--LLYEHMLRNGVKPDD 782
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 208/459 (45%), Gaps = 38/459 (8%)
Query: 82 TSWNICLKGLLKSGQLGNACQLF----DGMPVRDVVSWNSMISGYASNGFSSDALELFVE 137
S N LKGL Q+ A +L D P +VV++ ++I+G+ G A +LF
Sbjct: 253 VSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 138 MQGAGMRPSSFTFSILTS---LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
M+ G+ P +S L ++ + + G+ L +VV+ +S I +Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL-DVVVFSSTIDVYVKSG 370
Query: 195 LVDYSFSVILTMKKI------DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
D + + ++ + + +++++ L+ + G A + ++ + P T
Sbjct: 371 --DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 249 CSTLMS---VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK----CNRLEDSV 301
S+L+ C NLR G ++ K+G+ + ++ +D SK + + SV
Sbjct: 429 YSSLIDGFCKCGNLR---SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 302 RLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRP------TEYMVSCLLS 355
++ + R + + S+I + + ++AL +F L I+P T VS +
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFN---ETKIK- 411
+F + +G+Q+ L+ + +D + + ++H+ K I+DA FN E K++
Sbjct: 546 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 605
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
D+V++NT++ G ++ +F+ L P+ +TL ++ + +D I++
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM- 664
Query: 472 FSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
FS+ E G KP Y +++ SK+ ++ + + E M
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 13/275 (4%)
Query: 162 HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDIISWNSLMWAC 221
H QVH I++S + + N L+ M+ G +D + + M D SW + C
Sbjct: 108 HELQVH--IMKSSIR-PTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGC 164
Query: 222 HRAGHHELALAHFYKM-----RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
G +E A F M + A +P + ++ C+ +RD + GKQV A C K+G
Sbjct: 165 IEMGDYEDAAFLFVSMLKHSQKGAFKIP-SWILGCVLKACAMIRDFELGKQVHALCHKLG 223
Query: 277 FV--YNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHL 334
F+ +S +S + I + + LED+ + + +T + +++ ++ +
Sbjct: 224 FIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRD 283
Query: 335 FVLTLRENIRPTEYMVSCLLSSFS-IFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYA 393
F+ I+ + S +L + S + G Q+HA KLGFESD ++ L+ MY
Sbjct: 284 FIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYG 343
Query: 394 KFGIIDDALHIFNETKIKDLVS-WNTIMMGLAYNG 427
K+G + DA +F +K + VS WN ++ NG
Sbjct: 344 KYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 120/251 (47%), Gaps = 10/251 (3%)
Query: 95 GQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM-----QGAGMRPSSFT 149
G+L Q+FD MP RD SW + G G DA LFV M +GA PS
Sbjct: 137 GRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWIL 196
Query: 150 FSILT--SLVSSPCHAKQVHGRIIRSG-MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTM 206
+L +++ KQVH + G +D + L SLI YG+ ++ + V+ +
Sbjct: 197 GCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQL 256
Query: 207 KKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDK-G 265
+ ++W + + +R G + + F +M + + + S ++ CS + D + G
Sbjct: 257 SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSG 316
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLF-TEQDRWDTALCTSMISSYAT 324
+QV A K+GF + ++ I+++ K +++D+ ++F + +D + +M++SY
Sbjct: 317 QQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQ 376
Query: 325 HDLGEDALHLF 335
+ + +A+ L
Sbjct: 377 NGIYIEAIKLL 387
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 98/208 (47%), Gaps = 6/208 (2%)
Query: 329 EDALHLFVLTLREN----IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGF--ESDA 382
EDA LFV L+ + + +++ C+L + ++ E+G Q+HAL KLGF E D+
Sbjct: 171 EDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDS 230
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIRE 442
L+ +L+ Y +F ++DA + ++ + V+W + G+ + F E+
Sbjct: 231 YLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNH 290
Query: 443 GMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKE 502
G+ + + VL AC++ S + + + G + ++EM K G +K+
Sbjct: 291 GIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKD 350
Query: 503 AIDIVETMPYTITLDMWRLILSVCVIHG 530
A + ++ ++ W +++ + +G
Sbjct: 351 AEKVFKSSKDETSVSCWNAMVASYMQNG 378
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 171/396 (43%), Gaps = 31/396 (7%)
Query: 76 ISHKNSTSWNICLKGLLKSGQLGNACQLFDGM------PVRDVVSWNSMISGYASNGFSS 129
I H N + NI L + QL A M P +V++ S+++G+
Sbjct: 112 IPH-NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEP--SIVTFGSLLNGFCRGDRVY 168
Query: 130 DALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHG------RIIRSGMDLSNVVLG 183
DAL +F +M G G +P+ ++ +++ C +KQV R+ + G+ +VV
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYN---TIIDGLCKSKQVDNALDLLNRMEKDGIG-PDVVTY 224
Query: 184 NSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHELALAHFYKMRD 239
NSLI+ G + ++ M K D+ ++N+L+ AC + G A + +M
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 240 AELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLED 299
L PD T S L+ LD+ +++F F G + + S I+ + K ++E
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 300 SVRLFTEQDR----WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLS 355
++LF E + +T T +I Y A +F + + P + LL
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 356 SFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK---- 411
+E + I A + K G ++D V + ++ K G + DA I+ +
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 412 DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPD 447
D+ ++ T+M+GL G LF+++ +G+ P+
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 177/432 (40%), Gaps = 54/432 (12%)
Query: 130 DALELFVEMQGAGMRPSSFTFSILTSLVSS-------------------P---------- 160
D+L+LF M PS FS L S +S P
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 161 ---CHAKQVH------GRIIRSGMDLSNVVLGNSLIAMYGKVGLVD--YSFSVILTMK-K 208
C Q+ G++I+ G + S V G+ L + D Y F ++ M K
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 209 IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS-VCSNLRDLDKGKQ 267
+++ +N+++ ++ + AL +M + PD T ++L+S +CS+ R D +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 268 VFAFCFKVGFVYNSIVS-SAAIDLFSKCNRLEDSVRLFTEQDRW----DTALCTSMISSY 322
V C +Y + + +A ID K R+ ++ + E R D + +I
Sbjct: 244 V--SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 323 ATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDA 382
+ ++A +F + + P S L++ + VE G+++ + + G +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 383 VLASTLVHMYAKFGIIDDALHIFNETKI----KDLVSWNTIMMGLAYNGKVSVTLDLFKE 438
V + L+ Y + G ++ A IF +++++N ++ GL NGK+ L + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 439 LIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG 498
+ + GM D +T ++ V + I+ S+ + G+ P YT ++ L K G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ-GLMPDIWTYTTMMLGLYKKG 480
Query: 499 MLKEAIDIVETM 510
+ +EA + M
Sbjct: 481 LRREADALFRKM 492
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 153/369 (41%), Gaps = 29/369 (7%)
Query: 230 ALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAID 289
+L F+ M LP S L+S S ++ D ++ +G +N + ++
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 290 LFSKCNRLEDSVRLFTEQDRW--DTALCT--SMISSYATHDLGEDALHLFVLTLRENIRP 345
F +C++L ++ + + + ++ T S+++ + D DAL++F + +P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 346 TEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
+ + ++ V+ + + + K G D V ++L+ G DA +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 406 NETKIK----DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYG 461
+ + D+ ++N ++ G+VS + ++E+IR + PD +T + ++
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 462 SFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAID----------IVETMP 511
S +DE ++F M ++ G P Y+ ++ K+ ++ + + T+
Sbjct: 305 SRLDEAEEMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 512 YTITLDMWRLILSVCVIHGDLQVIETVAKEIM--EREPQAPFPYLVLAQAYQMMGRWESL 569
YTI LI C G L V E + + ++ P Y VL G+ E
Sbjct: 364 YTI------LIQGYCR-AGKLNVAEEIFRRMVFCGVHPNI-ITYNVLLHGLCDNGKIEKA 415
Query: 570 VRVRKDMEQ 578
+ + DM++
Sbjct: 416 LVILADMQK 424
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 155/337 (45%), Gaps = 43/337 (12%)
Query: 184 NSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELALAHFY-KMR 238
++LI+ YG+ GL + + SV +MK + +++++N+++ AC + G +A F+ +M+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 239 DAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSK-CNRL 297
+ PD+ T ++L++VCS G ++ AA +LF + NR
Sbjct: 332 RNGVQPDRITFNSLLAVCSR-----------------GGLW-----EAARNLFDEMTNRR 369
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSF 357
EQD + I DL A + + I P S ++ F
Sbjct: 370 -------IEQDVFSYNTLLDAICKGGQMDL---AFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 358 SIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI----KDL 413
+ + + + + LG D V +TL+ +Y K G ++AL I E KD+
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFS 473
V++N ++ G GK +F E+ RE + P+ +T + ++ + G E ++IF
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 474 METEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
++ G++ Y+ +++ L K G++ A+ +++ M
Sbjct: 540 FKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 167/371 (45%), Gaps = 52/371 (14%)
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF-SILTSLVSSPCHAKQVH--- 167
V +++++IS Y +G +A+ +F M+ G+RP+ T+ +++ + KQV
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI--LTMKKI--DIISWNSLMWACHR 223
+ R+G+ + NSL+A+ + GL + + ++ +T ++I D+ S+N+L+ A +
Sbjct: 328 DEMQRNGVQPDRITF-NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
G +LA +M ++P+ + ST++ + D+ +F +G + +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 284 SSAAIDLFSKCNRLEDSVRLFTEQD----RWDTALCTSMISSYATHDLGEDALHLFVLTL 339
+ + +++K R E+++ + E + D +++ Y ++ +F
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 340 RENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID 399
RE++ P + + STL+ Y+K G+
Sbjct: 507 REHVLP-----------------------------------NLLTYSTLIDGYSKGGLYK 531
Query: 400 DALHIFNETKI----KDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
+A+ IF E K D+V ++ ++ L NG V + L E+ +EG++P+ +T +++
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 456 LACNYGSFVDE 466
A + +D
Sbjct: 592 DAFGRSATMDR 602
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 45/265 (16%)
Query: 54 NRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQLFDGMPV 109
N L + S G A +FD+++++ + S+N L + K GQ+ A ++ MPV
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 110 R----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ 165
+ +VVS++++I G+A G +AL LF EM+ G+ ++
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY--------------- 447
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWAC 221
N+L+++Y KVG + + ++ M K D++++N+L+
Sbjct: 448 ------------------NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 222 HRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNS 281
+ G ++ F +M+ +LP+ T STL+ S + ++F G +
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 282 IVSSAAIDLFSKCNRLEDSVRLFTE 306
++ SA ID K + +V L E
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDE 574
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 21/286 (7%)
Query: 244 PDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV-----SSAAIDL------FS 292
P F S L + S+L G++ F K+ F SSAA D FS
Sbjct: 119 PPNF--SPLQTPKSDLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFS 176
Query: 293 KCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEY--MV 350
+ + S+ L E + CT +I + + A+ + ++ R E +
Sbjct: 177 GDDEMFHSLMLSFESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLA 236
Query: 351 SCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK- 409
S ++S+ + V + +I G+ + S L+ Y + G+ ++A+ +FN K
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 410 ---IKDLVSWNTIMMGLAYNG-KVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVD 465
+LV++N ++ G + F E+ R G+ PDRIT ++L C+ G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 466 EGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
+F M T ++ Y +++ + K G + A +I+ MP
Sbjct: 357 AARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 183/415 (44%), Gaps = 43/415 (10%)
Query: 93 KSGQLGNACQLFDGMP----VRDVVSWNSMISGYASNGFS-SDALELFVEMQGAGMRPSS 147
+SG A +F+ M ++V++N++I G + F EMQ G++P
Sbjct: 280 RSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR 339
Query: 148 FTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVIL 204
TF+ L ++ S A+ + + ++ +V N+L+ K G +D +F ++
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE-QDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 205 TM--KKI--DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLR 260
M K+I +++S+++++ +AG + AL F +MR + D+ + +TL+S+ + +
Sbjct: 399 QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 261 DLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW----DTALCT 316
++ + VG + + +A + + K + ++ ++FTE R + +
Sbjct: 459 RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 317 SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKL 376
++I Y+ L ++A+ +F +R + S L+ + V + + + K
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 377 GFESDAVLASTLVHMYAKFGIID---------------DALHIFNETKIKDLVSWNTIMM 421
G + V ++++ + + +D AL ET+ ++ +
Sbjct: 579 GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLT 638
Query: 422 GLAYN----------GKVSVTLDLFKELIREGMAPDRITLAAVLLACNY-GSFVD 465
+ N ++S L++F+++ + + P+ +T +A+L AC+ SF D
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 44/296 (14%)
Query: 40 HFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDIS----HKNSTSWNICLKGLLKSG 95
+L + L+ +Y N L +Y+ +G +AL + +++ K+ ++N L G K G
Sbjct: 436 RYLGIALDRVSY--NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 96 QLGNACQLFDGMP----VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFS 151
+ ++F M + ++++++++I GY+ G +A+E+F E + AG+R +S
Sbjct: 494 KYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Query: 152 IL------TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
L LV S A + + + G+ NVV NS+I +G+ +D S
Sbjct: 554 ALIDALCKNGLVGS---AVSLIDEMTKEGIS-PNVVTYNSIIDAFGRSATMDRS------ 603
Query: 206 MKKIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
D + SL ++ AL+ + ++ F T S +D ++G
Sbjct: 604 ---ADYSNGGSLPFSSS-------ALSALTETEGNRVI-QLFGQLTTESNNRTTKDCEEG 652
Query: 266 KQ-------VFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
Q VF ++ N + SA ++ S+CN ED+ L E +D +
Sbjct: 653 MQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKV 708
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 185/435 (42%), Gaps = 58/435 (13%)
Query: 47 NTYTYLGNRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNACQ 102
N TY N +D Y L I+D K+ ++ K N S+N+ + GL + G++
Sbjct: 239 NVVTY--NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 103 LFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVS 158
+ M R D V++N++I GY G AL + EM G+ PS T+ TSL+
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY---TSLIH 353
Query: 159 SPCHAKQVHGRI-----IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KI 209
S C A ++ + +R N +L+ + + G ++ ++ V+ M
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
++++N+L+ G E A+A M++ L PD + ST++S D+D+ +V
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
+ G ++I S+ I F + R +++ L+ E
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM---------------------- 511
Query: 330 DALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLV 389
LR + P E+ + L++++ + +E +Q+H + + G D V S L+
Sbjct: 512 ---------LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 390 HMYAKFGIIDDA----LHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMA 445
+ K +A L +F E + V+++T++ + N + + L K +GM
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS-NIEFKSVVSLIKGFCMKGMM 621
Query: 446 PDRITLAAVLLACNY 460
+ + +L N+
Sbjct: 622 TEADQVFESMLGKNH 636
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 176/430 (40%), Gaps = 44/430 (10%)
Query: 159 SPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK-KIDIISWNSL 217
S H Q HG G+ N VL ++ I + + F +L + ++ ++N L
Sbjct: 155 SIVHLAQAHG--FMPGVLSYNAVL-DATIRSKRNISFAENVFKEMLESQVSPNVFTYNIL 211
Query: 218 MWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF 277
+ AG+ ++AL F KM LP+ T +TL+ LR +D G ++ G
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 271
Query: 278 VYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR----WDTALCTSMISSYATHDLGEDALH 333
N I + I+ + R+++ + TE +R D ++I Y AL
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 334 LFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYA 393
+ LR + P+ + L+ S + ++ + G + +TLV ++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 394 KFGIIDDALHIFNETK----IKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRI 449
+ G +++A + E +V++N ++ G GK+ + + +++ +G++PD +
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 450 TLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVET 509
+ + VL VDE +++ M E G+KP Y+ +++ + KEA D+ E
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREM-VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE- 509
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFPYLVLAQAYQMMGRWESL 569
+M R+ L P F Y L AY M G E
Sbjct: 510 -------EMLRVGL-----------------------PPDEFTYTALINAYCMEGDLEKA 539
Query: 570 VRVRKDMEQK 579
+++ +M +K
Sbjct: 540 LQLHNEMVEK 549
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 205/508 (40%), Gaps = 63/508 (12%)
Query: 21 LLDHCLSQKSVNFVKIVHAHF-LKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK 79
+LD C K + I H + L + +N + C YS LG KV
Sbjct: 107 VLDFC---KQLELNGIAHNIYTLNIMINCFCRCCKTCF-AYSVLG------KVMKLGYEP 156
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELF 135
++T++N +KGL G++ A L D M DVV++NS+++G +G +S AL+L
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 136 VEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+M+ ++ FT+S +++ S C G
Sbjct: 217 RKMEERNVKADVFTYS---TIIDSLCRD------------------------------GC 243
Query: 196 VDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCST 251
+D + S+ M+ K ++++NSL+ +AG M E++P+ T +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 252 LMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR-- 309
L+ V L + +++ G N I + +D + NRL ++ + R
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 310 --WDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI 367
D TS+I Y +D + +F + + S L+ F +++
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 368 QIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDL----VSWNTIMMGL 423
++ + G D + L+ G ++ AL IF + + + V + TI+ G+
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 424 AYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CNYGSFVDEGIKIFFSMETEFGVKP 482
GKV +LF L +G+ P+ +T ++ C GS + I + ME E G P
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI-LLRKME-EDGNAP 541
Query: 483 GEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+ Y ++ + G L + ++E M
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 208/464 (44%), Gaps = 47/464 (10%)
Query: 82 TSWNICLKGLLKSG----QLGNACQLFDGM----PVRDVVSWNSMISGYASNGFSSDALE 133
++ N+C + L+SG + +A LF M P+ +V ++ S A + L+
Sbjct: 50 SNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD 109
Query: 134 LFVEMQGAGMRPSSFTFSILTSL---VSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIA-- 188
+++ G+ + +T +I+ + C A V G++++ G + N+LI
Sbjct: 110 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF-NTLIKGL 168
Query: 189 -MYGKVGLVDYSFSVILTMKKI------DIISWNSLMWACHRAGHHELALAHFYKMRDAE 241
+ GKV S +V+L + + D++++NS++ R+G LAL KM +
Sbjct: 169 FLEGKV-----SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
Query: 242 LLPDQFTCSTLM-SVCSNLRD--LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLE 298
+ D FT ST++ S+C RD +D +F G + + ++ + K +
Sbjct: 224 VKADVFTYSTIIDSLC---RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 299 DSVRLFTEQDRWDTALCTSMISSYATHDLG------EDALHLFVLTLRENIRPTEYMVSC 352
D L +D + ++I+ D+ ++A L+ + I P +
Sbjct: 281 DGALLL--KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 353 LLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKD 412
L+ + + + + L+ + D V ++L+ Y +DD + +F +
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 413 LV----SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA-CNYGSFVDEG 467
LV +++ ++ G +GK+ + +LF+E++ G+ PD +T +L C+ G ++
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL-EKA 457
Query: 468 IKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMP 511
++IF ++ + G YT ++E + K G +++A ++ ++P
Sbjct: 458 LEIFEDLQKS-KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 373 VPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWNTIMMGLAYNGK 428
V KLG+E D +TL+ G + +A+ + + D+V++N+I+ G+ +G
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 429 VSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYT 488
S+ LDL +++ + D T + ++ + +D I +F MET+ G+K Y
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYN 267
Query: 489 YVVEMLSKAG-------MLKEAIDIVETMPYTITLDMWRLILSVCVIHGDLQVIETVAKE 541
+V L KAG +LK+ + E +P IT + ++L V V G LQ + KE
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVS-REIVPNVIT---FNVLLDVFVKEGKLQEANELYKE 323
Query: 542 IMER--EPQAPFPYLVLAQAYQMMGR 565
++ R P Y L Y M R
Sbjct: 324 MITRGISPNI-ITYNTLMDGYCMQNR 348
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/523 (20%), Positives = 213/523 (40%), Gaps = 55/523 (10%)
Query: 83 SWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEM 138
++N+ L+ +L++ Q A LFD M R D +++++I+ + G AL +M
Sbjct: 157 AYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM 216
Query: 139 QGAGMRPSSFTFSILTSLVSSPC---HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGL 195
+ + +S L L C A + R+ RSG+ ++V NS+I +YGK L
Sbjct: 217 EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI-TPDLVAYNSMINVYGKAKL 275
Query: 196 VDYSFSVILTMKKIDI----ISWNSLMWACHRAGHHEL-ALAHFYKMRDAELLPDQFTCS 250
+ +I M + + +S+++L+ + + H L AL+ F +M++ D TC+
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLL-SVYVENHKFLEALSVFAEMKEVNCALDLTTCN 334
Query: 251 TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
++ V L + + ++F K+ N + + + ++ + +++ LF R
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394
Query: 311 D----TALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG 366
D +MI Y E A +L I P S ++S + ++
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 367 IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYN 426
+ + G E D VL T++ Y + G++ A + +E K+ D + T + LA
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA 514
Query: 427 GK-------------------VSV----------------TLDLFKELIREGMAPDRITL 451
G+ +SV +++F+++ G PD +
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 574
Query: 452 AAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAG--MLKEAIDIVET 509
A VL A ++ ++ M+ E V P E H+ + SK M++ +E+
Sbjct: 575 AMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLES 634
Query: 510 MPYTITLDMWRLILSVCVIHGDLQVIETVAKEIMEREPQAPFP 552
P + ++ ++ ++ L V + ER PFP
Sbjct: 635 DPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFP 677
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 158/388 (40%), Gaps = 75/388 (19%)
Query: 54 NRCLDLYSDLGHINDALKVFDDIS----HKNSTSWNICLKGLLKSGQLGNACQLFDGMPV 109
N +D+Y L + +A ++F + N S+N L+ ++ G A LF M
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 110 RD----VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQ 165
+D VV++N+MI Y A L EMQ G+ P++ T+S
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS-------------- 439
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWAC 221
++I+++GK G +D + ++ ++ +ID + + +++ A
Sbjct: 440 -------------------TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 222 HRAG--HHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVY 279
R G H L H K LPD T +++ + ++ VF F+ G V
Sbjct: 481 ERVGLMGHAKRLLHELK------LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVK 534
Query: 280 NSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW-----DTALCTSMISSYATHDLGEDALHL 334
+ V I+L+S+ R + + +F E+ R D+ + ++++Y E A +
Sbjct: 535 DISVFGCMINLYSRNQRYVNVIEVF-EKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 335 FVLTLREN-IRPTE--YMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVH- 390
+ E + P E + + L SS F VE Q ESD + S +H
Sbjct: 594 YREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQ--------RLESDPNVNSKELHL 645
Query: 391 ----MYAKFGIIDDALHIFNETKIKDLV 414
+Y + ++DA + N + + ++
Sbjct: 646 VVAALYERADKLNDASRVMNRMRERGIL 673
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/345 (18%), Positives = 145/345 (42%), Gaps = 62/345 (17%)
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS---------------- 254
+ ++N ++ RA ++A F +MR L PD++T STL++
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 255 ------------VCSNLRDL-------DKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCN 295
+ SNL +L K +F+ + G + + ++ I+++ K
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 296 RLEDSVRLFTEQDRW----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVS 351
++ L E + +T ++++S Y + +AL +F ++E V+
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA-EMKE--------VN 325
Query: 352 CLLSSFSIFLPVEVGIQIHAL---------VPKLGFESDAVLASTLVHMYAKFGIIDDAL 402
C L + + ++V Q+ + + K+ E + V +T++ +Y + + +A+
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 403 HIFNETKIKDL----VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
H+F + KD+ V++NT++ + +L +E+ G+ P+ IT + ++
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 459 NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEA 503
+D +F + + GV+ + Y ++ + G++ A
Sbjct: 446 GKAGKLDRAATLFQKLRSS-GVEIDQVLYQTMIVAYERVGLMGHA 489
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 193/465 (41%), Gaps = 63/465 (13%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV---- 166
D+V+ N ++S Y S S AL F M+GA +RP + TF+I+ +S + Q
Sbjct: 247 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 306
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACH 222
+ + +VV S++ +Y G ++ +V M K +I+S+N+LM A
Sbjct: 307 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 366
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
G AL+ ++ ++PD + + L++ R K K+VF K N +
Sbjct: 367 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 426
Query: 283 VSSAAIDLFSKCNRLEDSVRLFT--EQD-------------------------------- 308
+A ID + L ++V +F EQD
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 309 -----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPV 363
+TA S I SY E A+ L+ ++ ++ + L+S
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 364 EVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI----KDLVSWNTI 419
I + L + S+++ Y+K G + +A IFN+ K+ D++++ ++
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 420 MMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFG 479
+ + K +LF E+ G+ PD I +A++ A N G + +F M+
Sbjct: 607 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG---QPSNVFVLMDL--- 660
Query: 480 VKPGEEHYTYVV--EMLSKAGMLKE---AIDIVETM-PYTITLDM 518
++ E +T V E+ S L+E AID+++ M PY +L +
Sbjct: 661 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 705
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 171/417 (41%), Gaps = 62/417 (14%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSG 174
+N MI +A + + A LF EMQ +P + T+
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETY------------------------ 181
Query: 175 MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII----SWNSLMWACHRAGHHELA 230
++LI +G+ G ++ +++ M + I ++N+L+ AC +G+ A
Sbjct: 182 ---------DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 232
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF-----VYNSIV-- 283
L KM D + PD T + ++S + R K F +N I+
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 284 ------SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVL 337
SS A+DLF +S+R + R D TS++ Y+ E+ +F
Sbjct: 293 LSKLGQSSQALDLF-------NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 338 TLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGI 397
+ E ++P + L+ ++++ + + + + G D V + L++ Y +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 398 IDDALHIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
A +F E + ++V++N ++ NG ++ +++F+++ ++G+ P+ +++
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+L AC+ S + S G+ Y + A L++AI + ++M
Sbjct: 466 LLAACSR-SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 175/392 (44%), Gaps = 36/392 (9%)
Query: 39 AHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKS 94
A LK + +Y L + Y+ G AL V DI + S+ L +S
Sbjct: 348 AEGLKPNIVSYNAL----MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 95 GQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
Q G A ++F M +VV++N++I Y SNGF ++A+E+F +M+ G++P+
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN--VV 461
Query: 151 SILTSLVSSPCHAKQVHGRIIRS-----GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
S+ T L + K+V+ + S G++L N NS I Y ++ + ++ +
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINL-NTAAYNSAIGSYINAAELEKAIALYQS 520
Query: 206 MK----KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
M+ K D +++ L+ R + A+++ +M D + + S+++ S
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 580
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD----RWDTALCTS 317
+ + + +F G + I ++ + ++ + + LF E + D+ C++
Sbjct: 581 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 640
Query: 318 MISSYATHDLGEDALHLFVLT--LRENIRP-TEYMVSCLLSSFSIFLPVEVGIQ-IHALV 373
++ ++ + G ++FVL +RE P T + + S+ + + I I +
Sbjct: 641 LMRAF---NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
P L S L + ++H++ K G ++ + +F
Sbjct: 698 PYLPSLSIG-LTNQMLHLFGKSGKVEAMMKLF 728
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 193/465 (41%), Gaps = 63/465 (13%)
Query: 111 DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQV---- 166
D+V+ N ++S Y S S AL F M+GA +RP + TF+I+ +S + Q
Sbjct: 115 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Query: 167 HGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWACH 222
+ + +VV S++ +Y G ++ +V M K +I+S+N+LM A
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 234
Query: 223 RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSI 282
G AL+ ++ ++PD + + L++ R K K+VF K N +
Sbjct: 235 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 283 VSSAAIDLFSKCNRLEDSVRLFT--EQD-------------------------------- 308
+A ID + L ++V +F EQD
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 309 -----RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPV 363
+TA S I SY E A+ L+ ++ ++ + L+S
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 364 EVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKI----KDLVSWNTI 419
I + L + S+++ Y+K G + +A IFN+ K+ D++++ ++
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 420 MMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFG 479
+ + K +LF E+ G+ PD I +A++ A N G + +F M+
Sbjct: 475 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG---QPSNVFVLMDL--- 528
Query: 480 VKPGEEHYTYVV--EMLSKAGMLKE---AIDIVETM-PYTITLDM 518
++ E +T V E+ S L+E AID+++ M PY +L +
Sbjct: 529 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 573
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 171/417 (41%), Gaps = 62/417 (14%)
Query: 115 WNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSG 174
+N MI +A + + A LF EMQ +P + T+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETY------------------------ 49
Query: 175 MDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII----SWNSLMWACHRAGHHELA 230
++LI +G+ G ++ +++ M + I ++N+L+ AC +G+ A
Sbjct: 50 ---------DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 100
Query: 231 LAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGF-----VYNSIV-- 283
L KM D + PD T + ++S + R K F +N I+
Sbjct: 101 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 160
Query: 284 ------SSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGEDALHLFVL 337
SS A+DLF +S+R + R D TS++ Y+ E+ +F
Sbjct: 161 LSKLGQSSQALDLF-------NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 338 TLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGI 397
+ E ++P + L+ ++++ + + + + G D V + L++ Y +
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 398 IDDALHIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
A +F E + ++V++N ++ NG ++ +++F+++ ++G+ P+ +++
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 454 VLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+L AC+ S + S G+ Y + A L++AI + ++M
Sbjct: 334 LLAACSR-SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 175/392 (44%), Gaps = 36/392 (9%)
Query: 39 AHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKS 94
A LK + +Y N + Y+ G AL V DI + S+ L +S
Sbjct: 216 AEGLKPNIVSY----NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 95 GQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTF 150
Q G A ++F M +VV++N++I Y SNGF ++A+E+F +M+ G++P+
Sbjct: 272 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN--VV 329
Query: 151 SILTSLVSSPCHAKQVHGRIIRS-----GMDLSNVVLGNSLIAMYGKVGLVDYSFSVILT 205
S+ T L + K+V+ + S G++L N NS I Y ++ + ++ +
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINL-NTAAYNSAIGSYINAAELEKAIALYQS 388
Query: 206 MK----KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
M+ K D +++ L+ R + A+++ +M D + + S+++ S
Sbjct: 389 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 448
Query: 262 LDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQD----RWDTALCTS 317
+ + + +F G + I ++ + ++ + + LF E + D+ C++
Sbjct: 449 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 508
Query: 318 MISSYATHDLGEDALHLFVLT--LRENIRP-TEYMVSCLLSSFSIFLPVEVGIQ-IHALV 373
++ ++ + G ++FVL +RE P T + + S+ + + I I +
Sbjct: 509 LMRAF---NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 565
Query: 374 PKLGFESDAVLASTLVHMYAKFGIIDDALHIF 405
P L S L + ++H++ K G ++ + +F
Sbjct: 566 PYLPSLSIG-LTNQMLHLFGKSGKVEAMMKLF 596
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 202/495 (40%), Gaps = 32/495 (6%)
Query: 78 HKNSTSWNICLKGLLKSGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALE 133
N + +K L++ + G+A ++ M + D+ +NS+I G + +A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 134 LFVEMQGAGMRPSSFTFSILTS--LVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYG 191
VEM G++P++FT+ S + +S + + + +R L N VL LI Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 192 KVGLVDYSFSVILTMKKIDII----SWNSLMWACHRAGHHELALAHFYKMRDAELLPDQF 247
K G V + S +M I+ ++ LM + + A F +MR + PD F
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 248 TCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQ 307
+ L++ S L ++ K +F + G N I+ + + F + +E + L E
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 308 DRWD-----TALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLP 362
CT + + DL E A LF + + P ++ + L+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAE-AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 363 VEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNE---------TKIKDL 413
VE I I K G S + L++ KFG + + N K D
Sbjct: 748 VERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND- 805
Query: 414 VSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFS 473
V++N ++ L G + +LF ++ + P IT ++L + E + F
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV-FD 864
Query: 474 METEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM-PYTITLDMWRLILSVC--VIHG 530
G++P Y+ ++ K GM +A+ +V+ M D +L +S C ++ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 531 DLQVIE-TVAKEIME 544
+V E VA+++ME
Sbjct: 925 FAKVGEMEVAEKVME 939
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 196/474 (41%), Gaps = 55/474 (11%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISH 78
S L+D L ++ + K + + G+N Y+ + C+ + S G + A +FD
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD---- 371
Query: 79 KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVVSWNSMISGYASNGFSSDALELFVEM 138
G++ SG + A ++ S+I GY EL VEM
Sbjct: 372 -----------GMIASGLIPQA------------QAYASLIEGYCREKNVRQGYELLVEM 408
Query: 139 QGAGMRPSSFTFSILTSLVSSPCHAKQVHG------RIIRSGMDLSNVVLGNSLIAMYGK 192
+ + S +T+ ++V C + + G +I SG NVV+ +LI + +
Sbjct: 409 KKRNIVISPYTYG---TVVKGMCSSGDLDGAYNIVKEMIASGCR-PNVVIYTTLIKTFLQ 464
Query: 193 VGLVDYSFSVILTMKK----IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFT 248
+ V+ MK+ DI +NSL+ +A + A + +M + L P+ FT
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 249 CSTLMS---VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSV---R 302
+S S DK + C G + N ++ + I+ + K ++ ++ R
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMREC---GVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 303 LFTEQD-RWDTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
+Q D T +++ +D +DA +F + I P + L++ FS
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDL----VSWN 417
++ I + + G + ++ + L+ + + G I+ A + +E +K L V++
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIF 471
TI+ G +G ++ LF E+ +G+ PD ++ C + V+ I IF
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 29/257 (11%)
Query: 60 YSDLGHINDALKVFDDISHKNSTS----WNICLKGLLKSGQLGNACQLFDGMPVR----D 111
+S LG++ A +FD++ + T +N+ L G +SG++ A +L D M V+ +
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 112 VVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRII 171
V++ ++I GY +G ++A LF EM+ G+ P SF + T+LV C V I
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY---TTLVDGCCRLNDVERAIT 753
Query: 172 RSGMD----LSNVVLGNSLIAMYGKVG-----------LVDYSFSVILTMKKIDIISWNS 216
G + S+ N+LI K G L+D SF K + +++N
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD---RFGKPNDVTYNI 810
Query: 217 LMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVG 276
++ + G+ E A F++M++A L+P T ++L++ + + VF G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 277 FVYNSIVSSAAIDLFSK 293
+ I+ S I+ F K
Sbjct: 871 IEPDHIMYSVIINAFLK 887
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 168/388 (43%), Gaps = 32/388 (8%)
Query: 93 KSGQLGNACQLFDGMP----VRDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSF 148
K G++ AC + M + D ++ +++G N DA E+F EM+G G+ P F
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 149 TFSILT---SLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVI-- 203
++ +L S + + A + ++ G+ NV++ N L+ + + G ++ + ++
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGL-TPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 204 LTMKKI--DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRD 261
+++K + + +++ +++ ++G A F +M+ L+PD F +TL+ C L D
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 262 LDKGKQVFAF----CFKVGFVYNSIVS----SAAIDLFSKC-NRLEDSVRLFTEQDRWDT 312
+++ +F C +N++++ +L ++ NRL D F + +
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--FDRFGKPND 805
Query: 313 ALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHAL 372
MI E A LF N+ PT + LL+ + +
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 373 VPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIKDLV---------SWNTIMMGL 423
G E D ++ S +++ + K G+ AL + ++ K+ V + ++ G
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 424 AYNGKVSVTLDLFKELIREGMAPDRITL 451
A G++ V + + ++R PD T+
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSATV 953
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/412 (18%), Positives = 172/412 (41%), Gaps = 17/412 (4%)
Query: 114 SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHG---RI 170
+++ +I G DA L VEM G+ + T+S+L + +A G +
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 171 IRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII----SWNSLMWACHRAGH 226
+ G+++ + + I + K G+++ + ++ M +I ++ SL+ R +
Sbjct: 339 VSHGINIKPYMY-DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 227 HELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSA 286
+M+ ++ +T T++ + DLD + G N ++ +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 287 AIDLFSKCNRLEDSVRLFTEQDRWDTA---LC-TSMISSYATHDLGEDALHLFVLTLREN 342
I F + +R D++R+ E A C S+I + ++A V +
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 343 IRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDAL 402
++P + +S + + + + G + VL + L++ Y K G + +A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 403 HIF----NETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLAC 458
+ ++ + D ++ +M GL N KV ++F+E+ +G+APD + ++
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 459 NYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
+ + + IF M E G+ P Y ++ ++G +++A ++++ M
Sbjct: 638 SKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 207/488 (42%), Gaps = 30/488 (6%)
Query: 39 AHFLKLGLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK-----NSTSWNICLKGLLK 93
+ LK+G +++G L + ++ DALKVFD +S + NS S++I + GL +
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 94 SGQLGNACQLFDGMPVR----DVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT 149
G+L A L D M + ++ +I G A LF EM G +P+ T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 150 FSILTSLVSSPCHAKQVHG--RIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK 207
+++L + ++ +G R + +V+ N+LI Y K G V +F ++ M+
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 208 K----IDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLD 263
K ++ ++N LM R G A+ +M D L PD + + L+ ++
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 264 KGKQVFAF--CFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDR----WDTALCTS 317
++ + CF + + + +A I+ F K + + + R D T+
Sbjct: 459 TAYKLLSSMNCFDIE--PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 318 MISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLG 377
+I DAL + ++ I T + ++ +L S V+ + + + KLG
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 378 FESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWNTIMMGLAYNGKVSVTL 433
V +TLV + G I + I K+ ++ + I+ GL G+V
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 434 DLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVE- 492
L + G++P+ +T ++ +D ++ +M E G + + Y+ +++
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM-VERGYELNDRIYSSLLQG 695
Query: 493 -MLSKAGM 499
+LS+ G+
Sbjct: 696 FVLSQKGI 703
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 176/408 (43%), Gaps = 31/408 (7%)
Query: 129 SDALELFVEMQGAGMRPSSFTF-SILTSLVSSPCHAK--QVHGRIIRSGMDLSNVVLGNS 185
S AL +F + +G +P+S T+ S++ L+ H K +V+ + G + + ++
Sbjct: 179 SKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 186 LIAMYGKVGLVDYSFSVILTMK--------KIDIISWNSLMWACHRAGHHELALAHFYKM 237
LI+ Y K+G D + + MK KI + +L+ + G E AL F +M
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI----YTTLLGIYFKVGKVEKALDLFEEM 294
Query: 238 RDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRL 297
+ A P +T + L+ +D+ + + G + + + +++ K R+
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 298 EDSVRLFTEQDRWDTALCTSMISSYAT--HDLGEDALHL------FVLTLRENIRPTEYM 349
E+ +F+E W CT + SY T L E H+ F +++ P+E+
Sbjct: 355 EELTNVFSEMGMWR---CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 350 VSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK 409
S L+ + VE + + + + GF +L++ K + A +F E K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 410 --IKDLVS--WNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVD 465
++ S + ++ GK+S +DLF E+ +G PD A++ ++
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 466 EGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETMPYT 513
E + ME E G + + ++ ++ G+ + AI++ ET+ ++
Sbjct: 532 EANSLLRKME-ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 182/453 (40%), Gaps = 96/453 (21%)
Query: 80 NSTSWNICLKGLLKSGQLGNACQLFDGM------PVRDVVSWNSMISGYASNGFSSDALE 133
++ +++ + K G+ +A +LFD M P + + +++ Y G AL+
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI--YTTLLGIYFKVGKVEKALD 289
Query: 134 LFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHG---RIIRSGMDLSNVVLGNSLIAMY 190
LF EM+ AG P+ +T++ L + + +G ++R G+ +VV N+L+ +
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL-TPDVVFLNNLMNIL 348
Query: 191 GKVGLVDYSFSVILTMK----KIDIISWNSLMWACHRAGHHELALAH-FYKMRDAELLPD 245
GKVG V+ +V M ++S+N+++ A + H ++ F KM+ + P
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 246 QFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFT 305
+FT S L ID + K NR+E ++ L
Sbjct: 409 EFTYSIL-----------------------------------IDGYCKTNRVEKALLLLE 433
Query: 306 EQDRWDTALCT----SMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFL 361
E D C S+I++ E A LF L+EN
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK-ELKEN------------------- 473
Query: 362 PVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWN 417
G S V A + H + K G + +A+ +FNE K + D+ ++N
Sbjct: 474 --------------FGNVSSRVYAVMIKH-FGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 418 TIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETE 477
+M G+ G ++ L +++ G D + +L I++F +++
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 478 FGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
G+KP Y ++ + AGM +EA ++ M
Sbjct: 579 -GIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 110/557 (19%), Positives = 220/557 (39%), Gaps = 123/557 (22%)
Query: 55 RCLDLYSDLGHINDALKVFDDISHK---------------------NSTSWNICLKGLLK 93
RCLD++ + +ND VF + + + N + I + L +
Sbjct: 94 RCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGR 153
Query: 94 SGQLGNACQLFDGMPV----RDVVSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFT 149
G L ++FD MP R V S+ ++I+ Y NG +LEL M+ + PS T
Sbjct: 154 EGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILT 213
Query: 150 FSILTSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKI 209
++ + + + R G+D ++ L A G+ +
Sbjct: 214 YNTVINACA-------------RGGLDWEGLL---GLFAEMRHEGI------------QP 245
Query: 210 DIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVF 269
DI+++N+L+ AC G + A F M D ++PD T S L+ LR L+K +
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 270 AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGE 329
G + + + ++ ++K +++++ +F + A CT ++Y+
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM---QAAGCTPNANTYSV----- 357
Query: 330 DALHLFVLTLR-ENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTL 388
L+LF + R +++R +FL ++ + DA + L
Sbjct: 358 -LLNLFGQSGRYDDVR-------------QLFLEMKSS----------NTDPDAATYNIL 393
Query: 389 VHMYAKFGIIDDALHIFNETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDR 448
+ ++ + G + + +F+ +++ E + PD
Sbjct: 394 IEVFGEGGYFKEVVTLFH-------------------------------DMVEENIEPDM 422
Query: 449 ITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVE 508
T ++ AC G ++ KI M T + P + YT V+E +A + +EA+
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 509 TM---PYTITLDMWRLILSVCVIHGDLQVIETVAKEIMERE-PQAPFPYLVLAQAYQMMG 564
TM +++ + +L G ++ E + +++ P+ + +AY+ G
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 565 RWESLVRVRKDMEQ-KC 580
++E V+ DME+ +C
Sbjct: 542 KFEEAVKTYVDMEKSRC 558
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 185/460 (40%), Gaps = 56/460 (12%)
Query: 82 TSWNICLKGLLKSGQLGNACQLFDGM----PVRDVVSWNSMISGYASNGFSSDALELFVE 137
+S+ L+ L + Q +A LF M P+ ++ + ++S A + LF +
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 138 MQGAGMRPSSFTFSIL---TSLVSSPCHAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVG 194
MQ G+ P T +I+ L S PC A G++++ G + ++V SL+ Y
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE-PDLVTFTSLLNGYCHWN 167
Query: 195 LVDYS---FSVILTMK-KIDIISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCS 250
++ + F IL M K +++++ +L+ + H A+ F +M P+ T +
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 251 TLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRW 310
L++ + + K N I +A ID F K +L ++ L+ +
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 311 ----DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVG 366
D S+I+ + L ++A +F L R P E + + L+ F VE G
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 367 IQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWNTIMMG 422
++I + + G ++ + + L+ Y G D A +FN+ + D+ ++N ++ G
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 423 LAYNGKVSVTL-----------------------------------DLFKELIREGMAPD 447
L NGKV L DLF L +GM P+
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 448 RITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGEEHY 487
IT ++ + E +F M+ E G P E Y
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMK-EDGFLPNESVY 506
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 15/216 (6%)
Query: 375 KLGFESDAVLASTLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIMMGLAYNGKVS 430
KLGFE D V ++L++ Y + I+DA+ +F++ ++V++ T++ L N ++
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 431 VTLDLFKELIREGMAPDRITLAAVLLA-CNYGSFVDEGIKIFFSMETEFGVKPGEEHYTY 489
++LF ++ G P+ +T A++ C G + D + M+ ++P +T
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR--IEPNVITFTA 263
Query: 490 VVEMLSKAGMLKEAIDIVETM----PYTITLDMWRLILSVCVIHGDLQVIETVAKEIMER 545
+++ K G L EA ++ M Y LI +C ++G L + +MER
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC-MYGLLDEARQMF-YLMER 321
Query: 546 EPQAP--FPYLVLAQAYQMMGRWESLVRVRKDMEQK 579
P Y L + R E +++ +M QK
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 187/438 (42%), Gaps = 34/438 (7%)
Query: 45 GLNTYTYLGNRCLDLYSDLGHINDALKVFDDISHK----NSTSWNICLKGLLKSGQLGNA 100
GL + N L++ +LG I A VFD++S + +S+S+ + + G + G++ A
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 101 CQLFDGMPVRDVVSWNS----MISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSL 156
+ GM R + N+ +++ NG + A+ F +M G +P+ F TSL
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINF---TSL 293
Query: 157 VSSPC------HAKQVHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKKID 210
+ C A ++ ++R+G NV +LI K G + +F + L + + D
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVRNGWK-PNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 211 -----IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKG 265
+ ++ S++ + A F +M++ L P+ T +TL++ +
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 266 KQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRL----FTEQDRWDTALCTSMISS 321
++ GF+ N +AAID K +R ++ L F+ D T +I
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 322 YATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESD 381
+ AL F + + + L+++F ++ ++ LV LG
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 382 AVLASTLVHMYAKFGIIDDALHIFNETK----IKDLVSWNTIMMGLAYNGKVSVTLDLFK 437
++++ Y K G ID AL F+ K + D ++ +++ GL V L++
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 438 ELIREGMAPD---RITLA 452
+I G++P R+TLA
Sbjct: 593 AMIDRGLSPPEVTRVTLA 610
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 174/426 (40%), Gaps = 40/426 (9%)
Query: 64 GHINDAL----KVFDDISHKNSTSWNICLKGLLKSGQLGNACQLFDGMPVRD-----VVS 114
G +N A+ K+ D N ++ + GL K G + A ++ + M VR+ V +
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM-VRNGWKPNVYT 324
Query: 115 WNSMISGYASNGFSSDALELFVEM-QGAGMRPSSFTFSILTSLVSSPC------HAKQVH 167
++I G G++ A LF+++ + +P+ T+ TS++ C A+ +
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY---TSMIGGYCKEDKLNRAEMLF 381
Query: 168 GRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMKK----IDIISWNSLMWACHR 223
R+ G+ NV +LI + K G ++ ++ M +I ++N+ + + +
Sbjct: 382 SRMKEQGL-FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 224 AGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIV 283
A K L D T + L+ D+++ F K GF + +
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
Query: 284 SSAAIDLFSKCNRLEDSVRLF---------TEQDRWDTALCTSMISSYATHDLGEDALHL 334
++ I F + ++++S RLF ++ + TSMIS Y + AL
Sbjct: 501 NNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY-----TSMISCYCKEGDIDLALKY 555
Query: 335 FVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAK 394
F R P + L+S V+ +++ + G V TL + Y K
Sbjct: 556 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
Query: 395 FGIIDDALHIFNETKIKDLV-SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAA 453
+A+ + K + + T++ L KV V F++L+ + + DR+TLAA
Sbjct: 616 RNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAA 675
Query: 454 VLLACN 459
AC+
Sbjct: 676 FTTACS 681
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 342 NIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIIDDA 401
N++ ++ C+L +FS + + + + G ++ + ++ + + G+I+ A
Sbjct: 142 NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYA 201
Query: 402 LHIFNETKIKDLV----SWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLA 457
++F+E ++ +V S+ +++G +GK+ +I+ G PD T +L A
Sbjct: 202 ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 261
Query: 458 CNYGSFVDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
V+ I F M + G KP ++T +++ L K G +K+A +++E M
Sbjct: 262 LCENGLVNRAIWYFRKM-IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 176/425 (41%), Gaps = 63/425 (14%)
Query: 61 SDLGHINDALKVFDDISH----KNSTSWNICLKGLLKSGQLGNACQLFDGMPVRDVV--- 113
+D G +A +F+++ + ++N LKG +K+G L +A + M R V
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 114 -SWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCH-------AKQ 165
+++ +I Y + G A + EM+ ++P+SF FS L + K+
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 166 VHGRIIRSGMDLSNVVLGNSLIAMYGKVGLVDYSFSVILTMK----KIDIISWNSLMWAC 221
+ ++ NVV I +GK +D++ + M + D ++WN+L+ C
Sbjct: 435 MKSIGVKPDRQFYNVV-----IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI-DC 488
Query: 222 H-RAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYN 280
H + G H +A F M LP T + +++ + D K++ G + N
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 281 SIVSSAAIDLFSKCNRLEDSVRLFTEQD----RWDTALCTSMISSYATHDLGEDALHLFV 336
+ + +D++ K R D++ E + + + ++I++YA L E A++ F
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 337 LTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFG 396
+ + ++P+ ++ L+++F DA + L +M
Sbjct: 609 VMTSDGLKPSLLALNSLINAFG------------------EDRRDAEAFAVLQYM----- 645
Query: 397 IIDDALHIFNETKIK-DLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVL 455
E +K D+V++ T+M L K +++E+I G PDR + +
Sbjct: 646 ---------KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLR 696
Query: 456 LACNY 460
A Y
Sbjct: 697 SALRY 701
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 17/278 (6%)
Query: 314 LCTS--MISSYATHDLG--EDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQI 369
LC S ++ S H LG E F+L+ ++ + P Y + L+ + + +E + +
Sbjct: 162 LCFSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTY--NALIGACARNNDIEKALNL 219
Query: 370 HALVPKLGFESDAVLASTLVHMYAKFGIIDDA--LHIFNETKIK----DLVSWNTIMMGL 423
A + + G++SD V S ++ + ID L ++ E + D+ N I+MG
Sbjct: 220 IAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGF 279
Query: 424 AYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPG 483
A +G S L L G++ TL +++ A E +F + + G+KP
Sbjct: 280 AKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELR-QSGIKPR 338
Query: 484 EEHYTYVVEMLSKAGMLKEAIDIVETMPYT-ITLD--MWRLILSVCVIHGDLQVIETVAK 540
Y +++ K G LK+A +V M ++ D + L++ V G + V K
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 541 EIMEREPQA-PFPYLVLAQAYQMMGRWESLVRVRKDME 577
E+ + Q F + L ++ G W+ +V K+M+
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 186/434 (42%), Gaps = 44/434 (10%)
Query: 48 TYTYLGNRCLDLYSDLGHINDALKVFDDISHKNST----SWNICLKGLLKSGQLGNACQL 103
TYT L + Y G IN AL+++ +++ K ++ L GL ++G + +A +L
Sbjct: 474 TYTSL----MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 104 FDGMPVRDV----VSWNSMISGYASNGFSSDALELFVEMQGAGMRPSSFTFSILTSLVSS 159
F+ M +V V++N MI GY G S A E EM G+ P ++++ L+
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR---PLIHG 586
Query: 160 PCHAKQV-HGRIIRSGMDLSNVVLG----NSLIAMYGKVGLVDYSFSVILTMKK----ID 210
C Q ++ G+ N L L+ + + G ++ + SV M + +D
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 211 IISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFA 270
++ + L+ + +L +M D L PD ++++ S D + ++
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 271 FCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTALCTSMISSYATHDLGED 330
G V N + +A I+ K + ++ L ++ S + + T+ D
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP------VSSVPNQVTYGCFLD 760
Query: 331 ALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGI-------QIHALVPKL---GFES 380
L + +++ + ++ LL++ + + + G + L+ ++ G
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 381 DAVLASTLVHMYAKFGIIDDALHIFNETKIK----DLVSWNTIMMGLAYNGKVSVTLDLF 436
D + +T+++ + + A+ ++N K D V++NT++ G G++ +L
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 437 KELIREGMAPDRIT 450
E++R+G+ P+ T
Sbjct: 881 NEMLRQGLIPNNKT 894
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/484 (20%), Positives = 203/484 (41%), Gaps = 32/484 (6%)
Query: 88 LKGLLKSGQLGNACQLFDGM---PVR-DVVSWNSMISGYASNGFSSDALELFVEMQGAGM 143
L GL+K G A +LF+ M +R DV + +I S A E+ M+ G
Sbjct: 199 LHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC 258
Query: 144 RPSSFTFSILTSLVSSPCHAKQVHGRI-IR---SGMDLS-NVVLGNSLIAMYGKVGLVDY 198
+ +++L + C ++V + I+ +G DL +VV +L+ KV +
Sbjct: 259 DVNIVPYNVL---IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 199 SFSVILTMKKIDI----ISWNSLMWACHRAGHHELALAHFYKMRDAELLPDQFTCSTLMS 254
++ M + + +SL+ + G E AL ++ D + P+ F + L+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 255 VCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDSVRLFTEQDRWDTAL 314
R + + +F K+G N + S ID+F + +L+ ++ E DT L
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM--VDTGL 433
Query: 315 C------TSMISSYATHDLGEDALHLFVLTLRENIRPTEYMVSCLLSSFSIFLPVEVGIQ 368
S+I+ + A + + + PT + L+ + + ++
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 369 IHALVPKLGFESDAVLASTLVHMYAKFGIIDDALHIFNET---KIK-DLVSWNTIMMGLA 424
++ + G +TL+ + G+I DA+ +FNE +K + V++N ++ G
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 425 YNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSFVDEGIKIFFSMETEFGVKPGE 484
G +S + KE+ +G+ PD + ++ E K+F + + E
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNE 612
Query: 485 EHYTYVVEMLSKAGMLKEAIDIVETM-PYTITLDM--WRLILSVCVIHGDLQVIETVAKE 541
YT ++ + G L+EA+ + + M + LD+ + +++ + H D ++ + KE
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 542 IMER 545
+ +R
Sbjct: 673 MHDR 676
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/527 (20%), Positives = 210/527 (39%), Gaps = 49/527 (9%)
Query: 19 STLLDHCLSQKSVNFVKIVHAHFLKLGLN----TYTYLGNRCLDLYSDLGHINDALKVFD 74
+ L+D + + +++ K+GL TY+ L +D++ G ++ AL
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL----IDMFCRRGKLDTALSFLG 426
Query: 75 ---DISHKNST-SWNICLKGLLKSGQLGNA----CQLFDGMPVRDVVSWNSMISGYASNG 126
D K S +N + G K G + A ++ + VV++ S++ GY S G
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 127 FSSDALELFVEMQGAGMRPSSFTFSILTSLVSSPCHAKQVHGRIIRSGMDL--------- 177
+ AL L+ EM G G+ PS +TF+ L S + +IR + L
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGL--------FRAGLIRDAVKLFNEMAEWNV 538
Query: 178 -SNVVLGNSLIAMYGKVGLVDYSFSVILTMKKIDII----SWNSLMWACHRAGHHELALA 232
N V N +I Y + G + +F + M + I+ S+ L+ G A
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 233 HFYKMRDAELLPDQFTCSTLMSVCSNLRDLDKGKQVFAFCFKVGFVYNSIVSSAAIDLFS 292
+ ++ + L+ L++ V + G + + ID
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 293 KCNRLEDSVRLFTE-QDRW---DTALCTSMISSYATHDLGEDALHLFVLTLRENIRPTEY 348
K + L E DR D + TSMI + + ++A ++ L + E P E
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 349 MVSCLLSSFSIFLPVEVGIQIHALVPKLGFESDAVLASTLVHMYAKFGIID--DALHIFN 406
+ +++ V + + + + + V + + K G +D A+ + N
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHN 777
Query: 407 ---ETKIKDLVSWNTIMMGLAYNGKVSVTLDLFKELIREGMAPDRITLAAVLLACNYGSF 463
+ + + ++N ++ G G++ +L +I +G++PD IT ++ +
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 464 VDEGIKIFFSMETEFGVKPGEEHYTYVVEMLSKAGMLKEAIDIVETM 510
V + I+++ SM TE G++P Y ++ AG + +A ++ M
Sbjct: 838 VKKAIELWNSM-TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883