Miyakogusa Predicted Gene
- Lj1g3v0911990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0911990.1 Non Chatacterized Hit- tr|I1JYZ7|I1JYZ7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.14,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PENTATRICOPEPTIDE (PPR) REPEAT-CONTAI,CUFF.26508.1
(673 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 728 0.0
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 388 e-108
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 343 2e-94
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 343 2e-94
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 340 2e-93
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 5e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 322 4e-88
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 1e-87
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 318 8e-87
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 1e-86
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 7e-86
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 1e-85
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 314 1e-85
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 314 2e-85
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 311 7e-85
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 311 8e-85
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 308 9e-84
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 2e-83
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 305 6e-83
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 1e-82
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 4e-82
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 6e-82
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 6e-82
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 301 7e-82
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 301 8e-82
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 3e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 297 1e-80
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 297 1e-80
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 296 2e-80
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 4e-80
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 8e-80
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 8e-80
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 4e-79
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 292 5e-79
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 5e-78
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 5e-78
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 5e-77
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 9e-77
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 1e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 4e-75
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 278 1e-74
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 277 1e-74
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 3e-74
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 276 4e-74
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 274 2e-73
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 274 2e-73
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 273 3e-73
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 5e-73
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 3e-72
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 4e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 7e-72
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 268 9e-72
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 2e-71
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 266 4e-71
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 258 8e-69
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 4e-68
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 254 1e-67
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 1e-67
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 5e-67
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 251 9e-67
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 2e-66
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 3e-66
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 246 3e-65
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 8e-65
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 244 1e-64
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 242 6e-64
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 238 9e-63
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 235 6e-62
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 234 2e-61
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 7e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 217 2e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 2e-54
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 1e-52
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 3e-52
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 8e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 177 2e-44
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 131 2e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 118 2e-26
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 9e-25
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 108 1e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 4e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 102 7e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 102 1e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 98 2e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 6e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 93 6e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 6e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 86 6e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 86 9e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 85 2e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 4e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 79 8e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 3e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 72 1e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 71 3e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 70 4e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 1e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 61 3e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 3e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 57 4e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 7e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 3e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 53 9e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 53 9e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 3e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 50 5e-06
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/658 (53%), Positives = 471/658 (71%), Gaps = 9/658 (1%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
RQ + LK G L+S + AN LLQ YSR G + A LFDEMP N FSWNT+IE +++
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 76 SGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGY 135
SG + SLR F MPE+ YSWN++VS FAK+G+L +A LF++MP K+ + N+++HGY
Sbjct: 106 SGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGY 165
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE 195
G+ +AL LFK ++ DA L TVL ACA+ AL CGKQ+HA++++ G+E
Sbjct: 166 ILNGYAEEALRLFKELNFSA------DAITLTTVLKACAELEALKCGKQIHAQILIGGVE 219
Query: 196 LEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD 255
D + SSLV Y KCGDL A+ + ++E DD SLSAL+SGYAN G++ E+R +FD
Sbjct: 220 C--DSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFD 277
Query: 256 SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVEL 315
+ ++C +LWNS+ISGY+ N +MEAL LF MR D T+A +++A L +E
Sbjct: 278 RKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLET 336
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
KQMH HACK G+ DIVVAS LLD YSK P EACK F E+++YDTILLN+MI VY +
Sbjct: 337 GKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFS 396
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
CGRI+DAK +F+ + +K+LISWNS+ G ++N C E ++ F +M+ LDL D+ S +SV
Sbjct: 397 CGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSV 456
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
ISACAS S LELGEQVF +A VGL+ D ++S+SL+D YCKCGFVE GR+VFD M+K+DE
Sbjct: 457 ISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDE 516
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT 555
V WN+++ GYATNG G EA+ LF++M +G+RP+ ITF VL+AC++ GLVEEGR LF++
Sbjct: 517 VPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFES 576
Query: 556 MKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRT 615
MK ++ P+ EH+SCMVDL ARAG + EAI+L+EEMPF D +MW S+LRGC+A+G +
Sbjct: 577 MKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKA 636
Query: 616 IGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+GK AAEKII+L+PEN AY+QLS + ATS DWE SA VR+LM + NV K PG SW D
Sbjct: 637 MGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/668 (34%), Positives = 348/668 (52%), Gaps = 85/668 (12%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
R +H S +K+G N + NRL+ YS+ G L+D Q+
Sbjct: 40 RYVHASVIKSGFSNE-IFIQNRLIDAYSKCGSLEDGRQV--------------------- 77
Query: 76 SGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGY 135
F MP++ Y+WN +V+ K G L A SLF SMP ++ WN+++ G+
Sbjct: 78 ----------FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGF 127
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGVL-----ATVLGACADCFALNCGKQVHARVI 190
++ +AL F M+H + VL A+VL AC+ +N G QVH+ +
Sbjct: 128 AQHDRCEEALCYFA--------MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS--L 177
Query: 191 VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
+ D + S+LV Y KC G + +A
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKC-------------------------------GNVNDA 206
Query: 251 RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
+RVFD D+ V WNS+I+ + NG +EAL +F+ M V D T+A+++SA SL
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266
Query: 311 LVVELVKQMHAHACKIG-VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
+++ +++H K + +DI++++A +D Y+K EA F + + I +M
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
I+ Y+ + A+ +F M+ + ++SWN+++ G +N EA+ +FC + +
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEF------DHIISTSLVDFYCKCGFVEIG 483
+SFA+++ ACA + L LG Q + G +F D + SL+D Y KCG VE G
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
VF M++ D VSWN +++G+A NGYG+EAL LFREM SG +P IT VLSAC H
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFS 603
G VEEGR+ F +M ++ + P +HY+CMVDL RAG L EA +IEEMP Q D+ +W S
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 604 VLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNV 663
+L C H N T+GK AEK+++++P N G Y+ LSN+ A WE VR+ M + V
Sbjct: 567 LLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Query: 664 QKIPGCSW 671
K PGCSW
Sbjct: 627 TKQPGCSW 634
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 61/295 (20%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
++ G+++H +K L + + +N + Y++ + +A +FD MP N + ++I
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
+ + + +F M E+ SWN L++ + ++G+ + A SLF
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-------------- 374
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIV 191
L K S+ P A +L ACAD L+ G Q H V+
Sbjct: 375 --------------CLLKRESVCPTHY------SFANILKACADLAELHLGMQAHVHVLK 414
Query: 192 EGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREAR 251
G F + G+ D D F ++L+ Y G + E
Sbjct: 415 HG---------------FKFQSGEED------------DIFVGNSLIDMYVKCGCVEEGY 447
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
VF +++ V WN++I G+ NG EAL LF+ M G D T+ +LSA
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 502
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/665 (32%), Positives = 339/665 (50%), Gaps = 96/665 (14%)
Query: 21 SFLKTGILNSSLTTANRLLQF-----------YSRRGCLDDATQLFDEMPQTNAFSWNTL 69
S+++TG N +L R+ ++ Y R G + A +LFDEMP+ + SWN +
Sbjct: 73 SYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVM 132
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
I+ ++ + + ++ LF MPE+ SWN ++S +A++G + A S+FD MP KN + WN
Sbjct: 133 IKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
++ Y + +A LFK+ L +C +LG V +
Sbjct: 193 ALLSAYVQNSKMEEACMLFKSRENWALVSWNC-------LLGGF-----------VKKKK 234
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
IVE + FD + +V S + +++GYA +GK+ E
Sbjct: 235 IVEARQF-FDSMNVRDVV-------------------------SWNTIITGYAQSGKIDE 268
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM-RRHGVSGDVSTVANILSAGC 308
AR++FD Q W +++SGY+ N EA LF +M R+ VS +
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN------------ 316
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT 368
A+L Y + + A + F + + NT
Sbjct: 317 ----------------------------AMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
MIT Y+ CG+I +AK +FD M + +SW +++ G +++ EA+ +F +M +++
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 429 KFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFD 488
+ SF+S +S CA LELG+Q+ G+ + G E + +L+ YCKCG +E +F
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 489 GMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEE 548
M D VSWNT++ GY+ +G+G AL F M+ G++P T AVLSAC HTGLV++
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 549 GRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGC 608
GR F TM +Y + P +HY+CMVDL RAG L +A +L++ MPF+ DA +W ++L
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS 588
Query: 609 IAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPG 668
HGN + + AA+KI ++PEN G Y+ LSN+ A+S W ++R M DK V+K+PG
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPG 648
Query: 669 CSWAD 673
SW +
Sbjct: 649 YSWIE 653
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/614 (33%), Positives = 310/614 (50%), Gaps = 36/614 (5%)
Query: 58 MPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLF 117
+P F +N ++ A+ + R+F +P+ +SWN L+ A++K+G + S F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 118 DSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCF 177
+ +P ++G+ WN +I GYS G A+ + TM D + L T+L +
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD--FSANLTRVTLMTMLKLSSSNG 153
Query: 178 ALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSAL 237
++ GKQ+H +VI G E ++ S L+ Y G + A +V + + + ++L
Sbjct: 154 HVSLGKQIHGQVIKLGFESYL--LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 238 VSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDV 297
+ G G + +A ++F +++ +V W ++I G NG EA+ F+ M+ G+ D
Sbjct: 212 MGGLLACGMIEDALQLFRG-MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 298 STVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGE 357
++L A L + KQ+HA + I V SAL+D Y K
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK------------- 317
Query: 358 LKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIF 417
C + AK +FD M K ++SW +++VG + EA+ IF
Sbjct: 318 ------------------CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 418 CRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC 477
M + D ++ ISACA+ S LE G Q GKAIT GL +S SLV Y KC
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 478 GFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
G ++ ++F+ M D VSW ++ YA G E + LF +M G++P +T T V+
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 538 SACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQAD 597
SAC GLVE+G+ F M Y I P I HYSCM+DL++R+G L EA+ I MPF D
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539
Query: 598 ANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVREL 657
A W ++L C GN IGK AAE +I+LDP +P Y LS++ A+ W+ AQ+R
Sbjct: 540 AIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRG 599
Query: 658 MIDKNVQKIPGCSW 671
M +KNV+K PG SW
Sbjct: 600 MREKNVKKEPGQSW 613
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 203/493 (41%), Gaps = 108/493 (21%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H +K G S L + LL Y+ GC+ DA ++F + N +N+L+ L
Sbjct: 158 GKQIHGQVIKLG-FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 75 HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHG 134
G ++L+LF M EK SW ++ A +NGL
Sbjct: 217 ACGMIEDALQLFRGM-EKDSVSWAAMIKGLA-----------------QNGLA------- 251
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI 194
++A+ F+ M + L+M D +VL AC A+N GKQ+HA +I
Sbjct: 252 -------KEAIECFREMKVQGLKM---DQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 195 ELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
+ + S+L+ Y KC L A V +K+ + S +A+V GY G+ EA ++F
Sbjct: 302 QDHI--YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVE 314
+D M+R G+ D T+ +SA ++ +E
Sbjct: 360 ---LD----------------------------MQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 315 LVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYS 374
Q H A G+ H + V+++L+ Y K ++ + F E+ D + M++ Y+
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 375 NCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFAS 434
GR E I +F +M LK D +
Sbjct: 449 QFGR-------------------------------AVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 435 VISACASKSCLELGEQVFGKAITVGLEFDHIIS----TSLVDFYCKCGFVEIGRKVFDGM 490
VISAC+ +E G++ F K +T E+ + S + ++D + + G +E + +GM
Sbjct: 478 VISACSRAGLVEKGQRYF-KLMTS--EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 491 -IKTDEVSWNTIL 502
D + W T+L
Sbjct: 535 PFPPDAIGWTTLL 547
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+L EG Q H + +G+++ +T +N L+ Y + G +DD+T+LF+EM +A SW ++
Sbjct: 386 SLEEGSQFHGKAITSGLIHY-VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 71 EAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
A+ G E+++LF M + + ++SA +++G ++ F M + G+
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
V ++ +I +S+ G +A+ M P DA T+L AC + L
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP------DAIGWTTLLSACRNKGNLEI 558
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
GK +I L SS+ Y G DS A++ ++E
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSI---YASKGKWDSVAQLRRGMRE 602
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 332/611 (54%), Gaps = 9/611 (1%)
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
N L+ + +G+ + +LF MP +T +SWN ++SA++K GD+ FD +P ++ +
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
W T+I GY G KA+ + M + +E L VL + A + GK+VH
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF---TLTNVLASVAATRCMETGKKVH 169
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
+ ++ G L + + +SL+ Y KCGD A V + D S +A+++ + G+
Sbjct: 170 SFIVKLG--LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV-SGDVSTVANILS 305
M A F+ ++ V WNS+ISG+ G ++ AL +F +M R + S D T+A++LS
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 306 AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL 365
A +L + + KQ+H+H G +V +AL+ YS+ G A + + D +
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 366 --LNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
++ Y G + AK IF ++ + +++W +++VG ++ EAI++F M
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
+ + ++ A+++S +S + L G+Q+ G A+ G + +S +L+ Y K G +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Query: 484 RKVFDGM-IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
+ FD + + D VSW ++++ A +G+ EAL LF M G+RP IT+ V SAC H
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
GLV +GR FD MK I P + HY+CMVDL+ RAG L EA + IE+MP + D W
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
S+L C H N +GK+AAE+++ L+PEN GAY L+N+ + WE +A++R+ M D
Sbjct: 588 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647
Query: 663 VQKIPGCSWAD 673
V+K G SW +
Sbjct: 648 VKKEQGFSWIE 658
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 35/306 (11%)
Query: 319 MHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGR 378
+H K G+ + + + L++ YSK+ A K F E+ NT+++ YS G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 379 IEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISA 438
++ FD + + +SW +++VG +AI + M ++ +F+ +V+++
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 439 CASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI------- 491
A+ C+E G++V + +GL + +S SL++ Y KCG + + VFD M+
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 492 ------------------------KTDEVSWNTILMGYATNGYGSEALTLFREM-RCSGV 526
+ D V+WN+++ G+ GY AL +F +M R S +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
P T +VLSAC + + G+ + + ++I+ + + ++ +Y+R G + A
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVETA 333
Query: 586 IDLIEE 591
LIE+
Sbjct: 334 RRLIEQ 339
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP-QTNAFSWNTLIEAH 73
G+Q+H S +K+G + S++ +N L+ Y++ G + A++ FD + + + SW ++I A
Sbjct: 432 GKQIHGSAVKSGEI-YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 74 LHSGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-- 127
GH E+L LF M H ++ + SA +G + FD M + ++
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 128 ---WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
+ ++ + + G ++A + M ++P D ++L AC ++ GK
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIEKMPIEP------DVVTWGSLLSACRVHKNIDLGKV 604
Query: 185 VHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVA-----GVVKEVDDFS 233
R+++ +E E + S+L Y CG + AA++ G VK+ FS
Sbjct: 605 AAERLLL--LEPE-NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 355/717 (49%), Gaps = 120/717 (16%)
Query: 3 MELQGIGRTLREGRQLHVSFLKTG-ILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT 61
++L ++L++G+++ G +++S+L ++L Y+ G L +A+++FDE+
Sbjct: 101 LQLCADSKSLKDGKEVDNFIRGNGFVIDSNL--GSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAM----PEKTHYSW-------------------- 97
A WN L+ SG + S+ LF M E Y++
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 98 ---------------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
N LV+ + K+ + A +FD M ++ + WN+II+GY G
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 143 KALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK-- 200
K LS+F M + +E+ D + +V CAD ++ G+ VH+ G++ F +
Sbjct: 279 KGLSVFVQMLVSGIEI---DLATIVSVFAGCADSRLISLGRAVHSI----GVKACFSRED 331
Query: 201 VLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ 260
C++L+ Y KCGDLDSA + VF D+
Sbjct: 332 RFCNTLLDMYSKCGDLDSA-------------------------------KAVFREMSDR 360
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMH 320
V + S+I+GY G EA+ LF+ M G+S DV TV +L+ +++ K++H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIE 380
+ + DI V++AL+D +Y+ CG ++
Sbjct: 421 EWIKENDLGFDIFVSNALMD-------------------------------MYAKCGSMQ 449
Query: 381 DAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML----DLKMDKFSFASVI 436
+A+ +F M K +ISWN+I+ G +KN +EA+ +F N+L D+ + A V+
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF---NLLLEEKRFSPDERTVACVL 506
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
ACAS S + G ++ G + G D ++ SLVD Y KCG + + +FD + D V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
SW ++ GY +G+G EA+ LF +MR +G+ I+F ++L AC H+GLV+EG F+ M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTI 616
+H I P +EHY+C+VD+ AR G L +A IE MP DA +W ++L GC H + +
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 617 GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+ AEK+ +L+PEN G Y+ ++N+ A +E WE ++R+ + + ++K PGCSW +
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 6/226 (2%)
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
T +++ N+ L ++ A+ + C D+ D + SV+ CA L+
Sbjct: 55 TTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKD 112
Query: 448 GEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYAT 507
G++V G D + + L Y CG ++ +VFD + + WN ++ A
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFD-TMKHNYNINPEI 566
+G S ++ LF++M SGV + TF+ V + V G L +K + +
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 567 EHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ +V Y + + A + +EM + D W S++ G +++G
Sbjct: 233 GN--SLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNG 275
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 212/716 (29%), Positives = 356/716 (49%), Gaps = 84/716 (11%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNA--FSWN 67
+T+ + + +H L GIL +LT+ L+ Y GCL A L P ++A + WN
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLTS--HLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 68 TLIEAHLHSGHRNESLRLFHAM------PEKTHYSW------------------------ 97
+LI ++ +G N+ L LF M P+ + +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 98 ---------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
N LV+ +++ L A +FD M + + WN+II Y+K G P+ AL +F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 149 KTMSLDPLEMVHC--DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
M+ + C D L VL CA + GKQ+H + E+ + + + L
Sbjct: 217 SRMTNE----FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS--EMIQNMFVGNCL 270
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS----RVDQCA 262
V Y KCG +D A V + D S +A+V+GY+ G+ +A R+F+ ++
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
V W++ ISGY G EAL + ++M G+ + T+ ++LS S+ + K++H +
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
A K + D G + +++N +I +Y+ C +++ A
Sbjct: 391 AIKYPI-----------DLRKNGHGD-------------ENMVINQLIDMYAKCKKVDTA 426
Query: 383 KWIFDTMSSKT--LISWNSILVGLAKNACPSEAIDIFCRMNMLD--LKMDKFSFASVISA 438
+ +FD++S K +++W ++ G +++ ++A+++ M D + + F+ + + A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 439 CASKSCLELGEQVFGKAITVGLE-FDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVS 497
CAS + L +G+Q+ A+ +S L+D Y KCG + R VFD M+ +EV+
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK 557
W +++ GY +GYG EAL +F EMR G + +T VL AC H+G++++G F+ MK
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 558 HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIG 617
+ ++P EHY+C+VDL RAG L A+ LIEEMP + +W + L C HG +G
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 618 KMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+ AAEKI +L + G+Y LSN+ A + W+ ++R LM K V+K PGCSW +
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 209/704 (29%), Positives = 340/704 (48%), Gaps = 107/704 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R+L +GR++H L + ++ N +L Y + G L DA ++FD MP+ N S+ ++
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILN-NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139
Query: 70 IEAHLHSGHRNESLRLFHAMPEKT----HYSWNMLVSAFAKSGDLQLAHSL--------- 116
I + +G E++RL+ M ++ +++ ++ A A S D+ L L
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 117 --------------------------FDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
F +P K+ + W++II G+S+ G +ALS K
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M + H + + + L AC+ + G Q+H I EL + + SL Y
Sbjct: 260 ML--SFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS--ELAGNAIAGCSLCDMY 315
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
+CG L+SA RRVFD WN II+
Sbjct: 316 ARCGFLNSA-------------------------------RRVFDQIERPDTASWNVIIA 344
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
G NG EA+++F +MR G D ++ ++L A + + Q+H++ K G
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF-DTM 389
D+ V N+++T+Y+ C + +F D
Sbjct: 405 DLTVC-------------------------------NSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGE 449
++ +SWN+IL ++ P E + +F M + + + D + +++ C S L+LG
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNG 509
QV ++ GL + I L+D Y KCG + R++FD M D VSW+T+++GYA +G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHY 569
+G EAL LF+EM+ +G+ P+ +TF VL+AC H GLVEEG L+ TM+ + I+P EH
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 570 SCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDP 629
SC+VDL ARAG L EA I+EM + D +W ++L C GN + + AAE I+++DP
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 630 ENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
N A++ L ++ A+S +WE +A +R M +V+KIPG SW +
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIE 717
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 139/308 (45%), Gaps = 28/308 (9%)
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFA-------------- 433
++S+ +++ +S++ + ++ I+ C+ N ++ F FA
Sbjct: 12 SVSNSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI 71
Query: 434 SVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT 493
S+I AC+S L G ++ + ++D I++ ++ Y KCG + R+VFD M +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 494 DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF 553
+ VS+ +++ GY+ NG G+EA+ L+ +M + P F +++ AC + V G+ L
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL- 190
Query: 554 DTMKHNYNINPEIEHY----SCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCI 609
H I E + + ++ +Y R + +A + +P + D W S++ G
Sbjct: 191 ----HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAGFS 245
Query: 610 AHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE--DWEGSAQVRELMIDKNV--QK 665
G ++++ +P YI S++ A S + +Q+ L I +
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 666 IPGCSWAD 673
I GCS D
Sbjct: 306 IAGCSLCD 313
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 214/699 (30%), Positives = 332/699 (47%), Gaps = 111/699 (15%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GRQLH +K G L+ ++ L+ Y + D ++FDEM + N +W TLI +
Sbjct: 112 GRQLHCQCIKFGFLDD-VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 75 HSGHRNESLRLFHAMP---------------------------------------EKTHY 95
+ +E L LF M +KT
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
N L++ + K G+++ A LFD K+ + WN++I GY+ G +AL +F +M L+
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN- 289
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
V A+V+ CA+ L +Q+H V+ G FD+ + ++L+ Y KC
Sbjct: 290 --YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG--FLFDQNIRTALMVAYSKCTA 345
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
+ A R+ + V + V W ++ISG++ N
Sbjct: 346 MLDALRLFKEIGCVGN------------------------------VVSWTAMISGFLQN 375
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVA 335
+ EA+ LF M+R GV + T + IL+A L V ++HA K V
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVG 431
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
+ALLDAY K EA K F + D + + M+ Y+ G E
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE--------------- 476
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISAC-ASKSCLELGEQVFGK 454
AI +F + +K ++F+F+S+++ C A+ + + G+Q G
Sbjct: 477 ----------------AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
AI L+ +S++L+ Y K G +E +VF + D VSWN+++ GYA +G +A
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
L +F+EM+ V+ +TF V +AC H GLVEEG FD M + I P EH SCMVD
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 640
Query: 575 LYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA 634
LY+RAG L +A+ +IE MP A + +W ++L C H +G++AAEKII + PE+ A
Sbjct: 641 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 700
Query: 635 YIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
Y+ LSN+ A S DW+ A+VR+LM ++NV+K PG SW +
Sbjct: 701 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 218/508 (42%), Gaps = 76/508 (14%)
Query: 107 SGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVL 166
S L AH+LFD P ++ + +++ G+S+ G ++A LF + +EM D +
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM---DCSIF 96
Query: 167 ATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV 226
++VL A G+Q+H + I G
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIKFGF-------------------------------- 124
Query: 227 KEVDDFSL-SALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
+DD S+ ++LV Y ++ R+VFD ++ V W ++ISGY N E L LF
Sbjct: 125 --LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
RM+ G + T A L V Q+H K G+ I V+
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS---------- 232
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
N++I +Y CG + A+ +FD K++++WNS++ G A
Sbjct: 233 ---------------------NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
N EA+ +F M + +++ + SFASVI CA+ L EQ+ + G FD
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 466 ISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNGYGSEALTLFREMRCS 524
I T+L+ Y KC + ++F + + VSW ++ G+ N EA+ LF EM+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 525 GVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
GVRP+ T++ +L+A ++ +K NY + + + ++D Y + G + E
Sbjct: 392 GVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEE 446
Query: 585 AIDLIEEMPFQADANMWFSVLRGCIAHG 612
A + + D W ++L G G
Sbjct: 447 AAKVFSGID-DKDIVAWSAMLAGYAQTG 473
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 169/376 (44%), Gaps = 34/376 (9%)
Query: 240 GYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVST 299
G ++ ++ A +FD + + S++ G+ +G EA LF + R G+ D S
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
+++L +L +Q+H K G D+ V ++L+D Y K
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN------------ 143
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
+D + +FD M + +++W +++ G A+N+ E + +F R
Sbjct: 144 -------------------FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
M + + F+FA+ + A + G QV + GL+ +S SL++ Y KCG
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
V R +FD V+WN+++ GYA NG EAL +F MR + VR S +F +V+
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 540 CDHTGLVEEGRNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
C + + L +K+ + + I + ++ Y++ + +A+ L +E+ +
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIR--TALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 599 NMWFSVLRGCIAHGNR 614
W +++ G + + +
Sbjct: 363 VSWTAMISGFLQNDGK 378
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 19/227 (8%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
++ +G+Q H F L+SSL ++ LL Y+++G ++ A ++F + + SWN++I
Sbjct: 510 SMGQGKQFH-GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 71 EAHLHSGHRNESLRLFHAMPE-KTHYSWNMLVSAFA---KSGDLQLAHSLFDSM--PCKN 124
+ G ++L +F M + K + FA +G ++ FD M CK
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 125 GLVW---NTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
+ ++ YS+ G KA+ + + M +P + + T+L AC
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMP-NP-----AGSTIWRTILAACRVHKKTEL 682
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
G+ ++I E VL S++ Y + GD A+V ++ E
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNM---YAESGDWQERAKVRKLMNE 726
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 192/576 (33%), Positives = 292/576 (50%), Gaps = 70/576 (12%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
L+ A + GD+ A +FD +P WN II GYS+ H + AL ++ M L V
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL---ARV 115
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D+ +L AC+ L G+ VHA+V L FD
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVF----RLGFD-------------------- 151
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD--SRVDQCAVLWNSIISGYVLNGE 277
D F + L++ YA ++ AR VF+ ++ V W +I+S Y NGE
Sbjct: 152 ---------ADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASA 337
MEAL +F +MR+ V D + ++L+A L ++ + +HA K+G+
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL--------- 253
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
E++ I LNTM Y+ CG++ AK +FD M S LI W
Sbjct: 254 -------------------EIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILW 291
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
N+++ G AKN EAID+F M D++ D S S ISACA LE ++
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
D IS++L+D + KCG VE R VFD + D V W+ +++GY +G EA++L
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYA 577
+R M GV P+ +TF +L AC+H+G+V EG F+ M ++ INP+ +HY+C++DL
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLG 470
Query: 578 RAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQ 637
RAG L +A ++I+ MP Q +W ++L C H + +G+ AA+++ +DP N G Y+Q
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 638 LSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
LSN+ A + W+ A+VR M +K + K GCSW +
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/607 (22%), Positives = 240/607 (39%), Gaps = 149/607 (24%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
+Q+H L G+ S +L+ S G + A Q+FD++P+ F WN +I +
Sbjct: 38 KQIHARLLVLGLQFSGFLI-TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 76 SGHRNESLRLFHAM------PEK-------------TH--------------------YS 96
+ H ++L ++ M P+ +H +
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV--WNTIIHGYSKRGHPRKALSLFKTM-SL 153
N L++ +AK L A ++F+ +P + W I+ Y++ G P +AL +F M +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
D V D L +VL A L G+ +HA V+ G+E+E D L SL Y KC
Sbjct: 217 D----VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD--LLISLNTMYAKC 270
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
G++ A+ +FD +LWN++ISGY
Sbjct: 271 -------------------------------GQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
NG EA+ +F M V D ++ + +SA + +E + M+ + + D+
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
++SAL+D ++K CG +E A+ +FD +
Sbjct: 360 ISSALIDMFAK-------------------------------CGSVEGARLVFDRTLDRD 388
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
++ W++++VG + EAI ++ M + + +F ++ AC + G F
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
+ DH I+ + C V D L+G A G+ +
Sbjct: 449 RMA------DHKINPQQQHYAC----------VID-------------LLGRA--GHLDQ 477
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINP-EIEHYSCM 572
A + ++C V+P + A+LSAC VE G + ++I+P HY +
Sbjct: 478 A---YEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL---FSIDPSNTGHYVQL 531
Query: 573 VDLYARA 579
+LYA A
Sbjct: 532 SNLYAAA 538
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 133/303 (43%), Gaps = 42/303 (13%)
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
G+ D AS + A K+Q + + L+ +I S+ G I A+ +F
Sbjct: 17 GIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
D + + WN+I+ G ++N +A+ ++ M + + D F+F ++ AC+ S L+
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 447 LGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE--VSWNTILMG 504
+G V + +G + D + L+ Y KC + R VF+G+ + VSW I+
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 505 YATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN------------- 551
YA NG EAL +F +MR V+P + +VL+A +++GR+
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 552 ----------------------LFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLI 589
LFD MK +P + ++ M+ YA+ G EAID+
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMK-----SPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 590 EEM 592
EM
Sbjct: 312 HEM 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 47/251 (18%)
Query: 12 LREGRQLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
L++GR +H S +K G+ + L + L Y++ G + A LFD+M N WN +I
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 71 EAHLHSGHRNESLRLFHAMPEK--------------------------THYSW------- 97
+ +G+ E++ +FH M K + Y +
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 98 ------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
+ L+ FAK G ++ A +FD ++ +VW+ +I GY G R+A+SL++ M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
VH + +L AC + G R+ I + C ++ G
Sbjct: 416 ERGG---VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC--VIDLLG 470
Query: 212 KCGDLDSAARV 222
+ G LD A V
Sbjct: 471 RAGHLDQAYEV 481
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 217/708 (30%), Positives = 335/708 (47%), Gaps = 109/708 (15%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
GI L G +H +K G L S++ + L+ YS+ ++ A ++F+ + + N W
Sbjct: 338 GIVANLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPE----------------------------------- 91
N +I + H+G ++ + LF M
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 92 ----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
K + N LV +AK G L+ A +F+ M ++ + WNTII Y + + +A L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
FK M+L + D LA+ L AC L GKQVH C S+
Sbjct: 517 FKRMNLCG---IVSDGACLASTLKACTHVHGLYQGKQVH----------------CLSV- 556
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
KCG LD D + S+L+ Y+ G +++AR+VF S + V N+
Sbjct: 557 ----KCG-LDR-----------DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
+I+GY N E EA+ LF+ M GV+ T A I+ A + L Q H K G
Sbjct: 601 LIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 328 VTHD-IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
+ + + +LL Y S+G EAC F EL
Sbjct: 660 FSSEGEYLGISLLGMYMNSRGMTEACALFSELS--------------------------- 692
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
S K+++ W ++ G ++N EA+ + M + D+ +F +V+ C+ S L
Sbjct: 693 ---SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 447 LGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK-TDEVSWNTILMGY 505
G + + + D + S +L+D Y KCG ++ +VFD M + ++ VSWN+++ GY
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 506 ATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPE 565
A NGY +AL +F MR S + P ITF VL+AC H G V +GR +F+ M Y I
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869
Query: 566 IEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKII 625
++H +CMVDL R G L EA D IE + DA +W S+L C HG+ G+++AEK+I
Sbjct: 870 VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929
Query: 626 QLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+L+P+N AY+ LSN+ A+ WE + +R++M D+ V+K+PG SW D
Sbjct: 930 ELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWID 977
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 155/603 (25%), Positives = 269/603 (44%), Gaps = 75/603 (12%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GRQ+H S +K G+ +S L+ Y++ + DA ++F+ + N W L ++
Sbjct: 179 GRQIHCSMIKMGLERNSY-CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYV 237
Query: 75 HSGHRNESLRLFHAMPEK----THYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNT 130
+G E++ +F M ++ H ++ +++ + + G L+ A LF M + + WN
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNV 297
Query: 131 IIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVI 190
+I G+ KRG A+ F M ++ G + + +G A+ L+ G VHA I
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN---LDLGLVVHAEAI 354
Query: 191 VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
G L + + SSLV Y KC +++AA+V ++E +D +A++ GYA+
Sbjct: 355 KLG--LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH------- 405
Query: 251 RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
NGE + + LF M+ G + D T ++LS +
Sbjct: 406 ------------------------NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 311 LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMI 370
+E+ Q H+ K + ++ V +AL+D Y+K +A + F
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF--------------- 486
Query: 371 TVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
+ M + ++WN+I+ ++ SEA D+F RMN+ + D
Sbjct: 487 ----------------ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
AS + AC L G+QV ++ GL+ D +SL+D Y KCG ++ RKVF +
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR 550
+ VS N ++ GY+ N EA+ LF+EM GV PS ITF ++ AC + G
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGT 649
Query: 551 NLFDTM-KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCI 609
+ K ++ E S ++ +Y + + EA L E+ +W ++ G
Sbjct: 650 QFHGQITKRGFSSEGEYLGIS-LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHS 708
Query: 610 AHG 612
+G
Sbjct: 709 QNG 711
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/602 (25%), Positives = 262/602 (43%), Gaps = 82/602 (13%)
Query: 27 ILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLF 86
+L S RLL+ + L + ++FDEMPQ A + L G S L
Sbjct: 37 VLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALA--------LRIGKAVHSKSLI 88
Query: 87 HAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALS 146
+ + N +V +AK + A FD + K+ WN+++ YS G P K L
Sbjct: 89 LGIDSEGRLG-NAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLR 146
Query: 147 LFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
F ++ + + + + VL CA + G+Q+H +I G LE + +L
Sbjct: 147 SFVSLFEN---QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG--LERNSYCGGAL 201
Query: 207 VKFYGKCGDLDSAARV---------------------AGVVKEV--------------DD 231
V Y KC + A RV AG+ +E D
Sbjct: 202 VDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDH 261
Query: 232 FSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH 291
+ +++ Y GK+++AR +F V WN +ISG+ G E A+ F MR+
Sbjct: 262 LAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS 321
Query: 292 GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEA 351
V ST+ ++LSA + ++L +HA A K+G+ +I V S+L
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSL------------- 368
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
+++YS C ++E A +F+ + K + WN+++ G A N
Sbjct: 369 ------------------VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH 410
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLV 471
+ +++F M +D F+F S++S CA+ LE+G Q I L + + +LV
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
D Y KCG +E R++F+ M D V+WNTI+ Y + SEA LF+ M G+
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
+ L AC H + +G+ + + ++ ++ S ++D+Y++ G + +A +
Sbjct: 531 CLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 592 MP 593
+P
Sbjct: 590 LP 591
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 288/512 (56%), Gaps = 6/512 (1%)
Query: 165 VLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAG 224
+LA++L C D +L GK +H + + G + + +L + L+ Y KCG A +V
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRP-NTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 225 VVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALAL 284
+ + +S + +VSGY +G + AR VFDS ++ V WN+++ GY +G EAL
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 285 FKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSK 344
+K RR G+ + + A +L+A ++L +Q H G ++V++ +++DAY+K
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 345 SQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGL 404
A + F E+ D + T+I+ Y+ G +E A+ +F M K +SW +++ G
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 405 AKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
+ + A+D+F +M L +K ++F+F+S + A AS + L G+++ G I + +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 465 IISTSLVDFYCKCGFVEIGRKVF---DGMIKTDEVSWNTILMGYATNGYGSEALTLFREM 521
I+ +SL+D Y K G +E +VF D K D V WNT++ A +G G +AL + +M
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDD--KHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 522 RCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGC 581
V+P+ T +L+AC H+GLVEEG F++M + I P+ EHY+C++DL RAGC
Sbjct: 405 IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 582 LGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNV 641
E + IEEMPF+ D ++W ++L C HGN +GK AA+++I+LDPE+ YI LS++
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSI 524
Query: 642 LATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
A WE ++R +M + V K SW +
Sbjct: 525 YADHGKWELVEKLRGVMKKRRVNKEKAVSWIE 556
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 227/499 (45%), Gaps = 70/499 (14%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
G ++L++G+ +H TG + +N L+ Y + G DA ++FD+M N +SW
Sbjct: 57 GDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSW 116
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
N ++ ++ SG + +F +MPE+ SWN +V +A+ G+L A + ++G+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR-RSGI 175
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
+N A +L AC L +Q H
Sbjct: 176 KFNEF---------------------------------SFAGLLTACVKSRQLQLNRQAH 202
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
+V+V G + VL S++ Y KCG ++SA R + D + L+SGYA G
Sbjct: 203 GQVLVAG--FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
M A ++F ++ V W ++I+GYV G AL LF++M GV + T ++ L A
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
S+ + K++H + + V + +V S+L+D YSKS G L+A + +
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS----------GSLEASERVF- 369
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
RI D K + WN+++ LA++ +A+ + M ++
Sbjct: 370 -----------RICDDK--------HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITV--GLEFDHIISTSLVDFYCKCG-FVEIG 483
++ + +++AC+ +E G + F +++TV G+ D L+D + G F E+
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWF-ESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 484 RKVFDGMIKTDEVSWNTIL 502
RK+ + + D+ WN IL
Sbjct: 470 RKIEEMPFEPDKHIWNAIL 488
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/628 (31%), Positives = 320/628 (50%), Gaps = 26/628 (4%)
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDS 119
Q A N LI+ + S N + +LF + E + +VS + SGD+ LA +F+
Sbjct: 46 QPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEK 105
Query: 120 MPC--KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA--- 174
P ++ +++N +I G+S A++LF M + + D A+VL A
Sbjct: 106 APVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP---DNFTFASVLAGLALVA 162
Query: 175 ----DCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD----LDSAARVAGVV 226
C Q HA + G + + ++LV Y KC L SA +V +
Sbjct: 163 DDEKQCV------QFHAAALKSGAG--YITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 227 KEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCA-VLWNSIISGYVLNGEEMEALALF 285
E D+ S + +++GY G + + D V +N++ISGYV G EAL +
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
+RM G+ D T +++ A + +++L KQ+HA+ + ++L+ Y K
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKC 333
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
EA F ++ A D + N +++ Y + G I +AK IF M K ++SW ++ GLA
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
+N E + +F M + ++F+ I +CA G+Q + + +G +
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 466 ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
+L+ Y KCG VE R+VF M D VSWN ++ +G+G+EA+ ++ EM G
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 526 VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
+RP IT VL+AC H GLV++GR FD+M+ Y I P +HY+ ++DL R+G +A
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 586 IDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATS 645
+IE +PF+ A +W ++L GC HGN +G +AA+K+ L PE+ G Y+ LSN+ A +
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAAT 633
Query: 646 EDWEGSAQVRELMIDKNVQKIPGCSWAD 673
WE A+VR+LM D+ V+K CSW +
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVACSWIE 661
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 164/369 (44%), Gaps = 62/369 (16%)
Query: 297 VSTVANILSAGCSLLV------VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
V +AN +A L + ++L + +H + G + + L+D Y KS +
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFD--TMSSKTLISWNSILVGLAKNA 408
A + F E+ D I TM++ Y G I A+ +F+ + + + +N+++ G + N
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACA-----SKSCLELGEQVFGKAITVGLEFD 463
AI++FC+M K D F+FASV++ A K C+ Q A+ G +
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV----QFHAAALKSGAGYI 183
Query: 464 HIISTSLVDFYCKCG----FVEIGRKVFDGMIKTDEVSWNTILMGYATNGY--------- 510
+S +LV Y KC + RKVFD +++ DE SW T++ GY NGY
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 511 -----------------------GSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVE 547
EAL + R M SG+ T+ +V+ AC GL++
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 548 EGRNLFDTMKHNYNINPEIEHY---SCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSV 604
G+ + H Y + E + + +V LY + G EA + E+MP + D W ++
Sbjct: 304 LGKQV-----HAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNAL 357
Query: 605 LRGCIAHGN 613
L G ++ G+
Sbjct: 358 LSGYVSSGH 366
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 74/300 (24%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L+ G+Q+H L+ + S N L+ Y + G D+A +F++MP + SWN L+
Sbjct: 302 LQLGKQVHAYVLRRE--DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
++ SGH E+ +F M EK SW +++S A++
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAEN------------------------ 395
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIV 191
G+ + G L LF M + E CD + + +CA A G+Q HA+++
Sbjct: 396 --GFGEEG-----LKLFSCMKREGFE--PCDYA-FSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 192 EGIELEFDKVLCS--SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
G FD L + +L+ Y KCG ++ E
Sbjct: 446 IG----FDSSLSAGNALITMYAKCGVVE-------------------------------E 470
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
AR+VF + +V WN++I+ +G EA+ +++ M + G+ D T+ +L+A CS
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA-CS 529
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 197/696 (28%), Positives = 336/696 (48%), Gaps = 111/696 (15%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
RQ H G++ ++ A +L+ Y G DA +FD++P+ + + W ++ +
Sbjct: 61 RQSHGVLTGNGLM-GDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCL 119
Query: 76 SGHRNESLRLFHAM--------------------------------------PEKTHYSW 97
+ E ++L+ + P +
Sbjct: 120 NKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL 179
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
L+ +AK G+++ AH +F+ + +N + W ++I GY K + L LF M +
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN-- 237
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
V + T++ AC AL+ GK H ++ GIEL L +SL+ Y KCGD+
Sbjct: 238 -VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS--SCLVTSLLDMYVKCGDIS 294
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
+A RRVF+ V+W ++I GY NG
Sbjct: 295 NA-------------------------------RRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLV-VELVKQMHAHACKIGVTHDIVVAS 336
EAL+LF++M+ + + T+A++LS GC L+ +EL + +H + K+G+
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLS-GCGLIENLELGRSVHGLSIKVGI-------- 374
Query: 337 ALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS 396
+DT + N ++ +Y+ C + DAK++F+ S K +++
Sbjct: 375 ------------------------WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVA 410
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
WNSI+ G ++N EA+ +F RMN + + + AS+ SACAS L +G + ++
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 457 TVGLEFDHII--STSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
+G + T+L+DFY KCG + R +FD + + + ++W+ ++ GY G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
L LF EM +P+ TFT++LSAC HTG+V EG+ F +M +YN P +HY+CMVD
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 590
Query: 575 LYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA 634
+ ARAG L +A+D+IE+MP Q D + + L GC H +G++ +K++ L P++
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 650
Query: 635 YIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
Y+ +SN+ A+ W + +VR LM + + KI G S
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 225/544 (41%), Gaps = 125/544 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
+ L G+++H +K ++ + T LL Y++ G + A ++F+++ N W ++
Sbjct: 156 QDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 70 IEAHLHSGHRNESLRLFHAMPEKT----HYSWNMLVSA---------------------- 103
I ++ + E L LF+ M E Y++ L+ A
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 104 -------------FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
+ K GD+ A +F+ + ++W +I GY+ G +ALSLF+
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 151 MS---LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
M + P + +A+VL C L G+ VH I GI +D + ++LV
Sbjct: 334 MKGVEIKP------NCVTIASVLSGCGLIENLELGRSVHGLSIKVGI---WDTNVANALV 384
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
Y KC Y N R+A+ VF+ ++ V WNS
Sbjct: 385 HMYAKC---------------------------YQN----RDAKYVFEMESEKDIVAWNS 413
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
IISG+ NG EAL LF RM V+ + TVA++ SA SL + + +HA++ K+G
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 328 --VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWI 385
+ + V +ALLD Y+K P A + I
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSA-------------------------------RLI 502
Query: 386 FDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCL 445
FDT+ K I+W++++ G K ++++F M K ++ +F S++SAC +
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 446 ELGEQVFGKAITVGLEFDHIISTS----LVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNT 500
G++ F +++ ST +VD + G +E + + M I+ D +
Sbjct: 563 NEGKKYFSSMYK---DYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGA 619
Query: 501 ILMG 504
L G
Sbjct: 620 FLHG 623
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 46/219 (21%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
G+ L GR +H +K GI ++++ AN L+ Y++ DA +F+ + + +W
Sbjct: 354 GLIENLELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 411
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKT----------------------------HYSWN 98
N++I +G +E+L LFH M ++ YS
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 99 M-------------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKAL 145
+ L+ +AK GD Q A +FD++ KN + W+ +I GY K+G +L
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSL 531
Query: 146 SLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
LF+ M + + ++L AC +N GK+
Sbjct: 532 ELFEEMLKKQQKP---NESTFTSILSACGHTGMVNEGKK 567
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 311/599 (51%), Gaps = 19/599 (3%)
Query: 84 RLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRK 143
R+ + + Y L+++++ A + S+P ++++I+ +K +
Sbjct: 40 RILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQ 99
Query: 144 ALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK 200
++ +F M L P D+ VL + CA+ A GKQ+H V G L+ D
Sbjct: 100 SIGVFSRMFSHGLIP------DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG--LDMDA 151
Query: 201 VLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----S 256
+ S+ Y +CG + A +V + + D + SAL+ YA G + E R+ S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV 316
++ V WN I+SG+ +G EA+ +F+++ G D TV+++L + ++ +
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
+ +H + K G+ D V SA++D Y KS + F + + + + N IT S
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 377 GRIEDAKWIFDTMSSKTL----ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
G ++ A +F+ +T+ +SW SI+ G A+N EA+++F M + +K + +
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK 492
S++ AC + + L G G A+ V L + + ++L+D Y KCG + + + VF+ M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNL 552
+ V WN+++ G++ +G E +++F + + ++P I+FT++LSAC GL +EG
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 553 FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
F M Y I P +EHYSCMV+L RAG L EA DLI+EMPF+ D+ +W ++L C
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 613 NRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
N + ++AAEK+ L+PENPG Y+ LSN+ A W +R M ++K PGCSW
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 216/517 (41%), Gaps = 121/517 (23%)
Query: 17 QLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHS 76
Q H LK+G N +A +L+ YS C +DA + +P +S+++LI A +
Sbjct: 36 QAHARILKSGAQNDGYISA-KLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 77 GHRNESLRLF-----HAMPEKTHYSWNML-----VSAFA--------------------- 105
+S+ +F H + +H N+ +SAF
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 106 --------KSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
+ G + A +FD M K+ + + ++ Y+++G + + + M +E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 158 M----------------VHCDAGVL----------------ATVLGACADCFALNCGKQV 185
H +A V+ ++VL + D LN G+ +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSL------SALVS 239
H VI +G L DK + S+++ YGK G V G++ + F + +A ++
Sbjct: 275 HGYVIKQG--LLKDKCVISAMIDMYGKSG------HVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 240 GYANAGKMREARRVFDSRVDQC----AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
G + G + +A +F+ +Q V W SII+G NG+++EAL LF+ M+ GV
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 296 DVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFF 355
+ T+ ++L A ++ + + H A ++ + ++ V SAL+D Y+K
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAK----------- 435
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAID 415
CGRI ++ +F+ M +K L+ WNS++ G + + E +
Sbjct: 436 --------------------CGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 416 IFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
IF + LK D SF S++SAC + G + F
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/702 (27%), Positives = 326/702 (46%), Gaps = 107/702 (15%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+L G QLH LK G +S N L+ Y G L A +F M Q +A ++NTLI
Sbjct: 303 SLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 71 EAHLHSGHRNESLRLF----------------------------------HAMPEKTHYS 96
G+ +++ LF HA K ++
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 97 WN-----MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
N L++ +AK D++ A F +N ++WN ++ Y R + +F+ M
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
+ E + + ++L C L G+Q+H+++I +L + +CS L+ Y
Sbjct: 482 QI---EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL--NAYVCSVLIDMYA 536
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
K GK+ A + + V W ++I+G
Sbjct: 537 KL-------------------------------GKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
Y + +AL F++M G+ D + N +SA L ++ +Q+HA AC G + D
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
+ P + N ++T+YS CG+IE++ F+ +
Sbjct: 626 L---------------PFQ----------------NALVTLYSRCGKIEESYLAFEQTEA 654
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
I+WN+++ G ++ EA+ +F RMN + + F+F S + A + + ++ G+QV
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG 511
G + + + +L+ Y KCG + K F + +EVSWN I+ Y+ +G+G
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
SEAL F +M S VRP+ +T VLSAC H GLV++G F++M Y ++P+ EHY C
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVC 834
Query: 572 MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
+VD+ RAG L A + I+EMP + DA +W ++L C+ H N IG+ AA +++L+PE+
Sbjct: 835 VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 894
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
Y+ LSN+ A S+ W+ R+ M +K V+K PG SW +
Sbjct: 895 SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 162/668 (24%), Positives = 279/668 (41%), Gaps = 133/668 (19%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+L EGR+LH LK G L+S+ + +L FY +G L A ++FDEMP+ F+WN +I
Sbjct: 100 SLDEGRKLHSQILKLG-LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 71 EAHLHSGHRNESLRLFHAM------PEKTHYSW--------------------------- 97
+ E LF M P + +S
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 98 -------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
N L+ ++++G + LA +FD + K+ W +I G SK +A+ LF
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF-- 276
Query: 151 MSLDPLEMVHCDAGVL---------ATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
CD VL ++VL AC +L G+Q+H V+ G D
Sbjct: 277 ----------CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG--FSSDTY 324
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC 261
+C++LV Y G+L SA +F + +
Sbjct: 325 VCNALVSLYFHLGNLISA-------------------------------EHIFSNMSQRD 353
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
AV +N++I+G G +A+ LFKRM G+ D +T+A+++ A + + +Q+HA
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
+ K+G + + ALL+ Y+K A +F E + + +L N M+ Y G ++D
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDD 470
Query: 382 AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACAS 441
+ + IF +M + ++ +++++ S++ C
Sbjct: 471 LR----------------------------NSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTI 501
LELGEQ+ + I + + + + L+D Y K G ++ + D VSW T+
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
+ GY + +ALT FR+M G+R + T +SAC ++EG+ +
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSG 621
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN-----RTI 616
+ ++ + +V LY+R G + E+ E+ D W +++ G GN R
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 617 GKMAAEKI 624
+M E I
Sbjct: 681 VRMNREGI 688
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 149/635 (23%), Positives = 269/635 (42%), Gaps = 109/635 (17%)
Query: 17 QLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHS 76
Q+H L G+ +S++ N L+ YSR G +D A ++FD + + SW +I +
Sbjct: 208 QIHARILYQGLRDSTVV-CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 77 GHRNESLRLF------HAMP---------------------EKTH------------YSW 97
E++RLF MP E+ H Y
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N LVS + G+L A +F +M ++ + +NT+I+G S+ G+ KA+ LFK M LD LE
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
D+ LA+++ AC+ L G+Q+HA G + + +L+ Y KC D++
Sbjct: 387 ---PDSNTLASLVVACSADGTLFRGQQLHAYTTKLG--FASNNKIEGALLNLYAKCADIE 441
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
+A D+ L V VLWN ++ Y L +
Sbjct: 442 TAL----------DYFLETEVEN---------------------VVLWNVMLVAYGLLDD 470
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASA 337
+ +F++M+ + + T +IL L +EL +Q+H+ K + V S
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
L+D Y+K G+++ A I + K ++SW
Sbjct: 531 LIDMYAK-------------------------------LGKLDTAWDILIRFAGKDVVSW 559
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
+++ G + +A+ F +M ++ D+ + +SACA L+ G+Q+ +A
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
G D +LV Y +CG +E F+ D ++WN ++ G+ +G EAL +
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYA 577
F M G+ + TF + + A T +++G+ + + + E E + ++ +YA
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYA 738
Query: 578 RAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ G + +A E+ + + + W +++ HG
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG 772
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 200/439 (45%), Gaps = 53/439 (12%)
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD 296
L Y G + A +VFD ++ WN +I E LF RM V+ +
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 297 VSTVANILSA--GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
T + +L A G S+ ++V+Q+HA ++ L D+
Sbjct: 186 EGTFSGVLEACRGGSV-AFDVVEQIHAR----------ILYQGLRDS------------- 221
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
T++ N +I +YS G ++ A+ +FD + K SW +++ GL+KN C +EAI
Sbjct: 222 --------TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 415 DIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
+FC M +L + ++F+SV+SAC LE+GEQ+ G + +G D + +LV Y
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
G + +F M + D V++NT++ G + GYG +A+ LF+ M G+ P + T
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 535 AVLSACDHTGLVEEGRNLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMP 593
+++ AC G + G+ L T K + N +IE +++LYA+ + A+D E
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETE 451
Query: 594 FQADANMWFSVLRGCIAHG--------NRTIGKMAAEKIIQLDPENPGAYIQLSNVLATS 645
+ + +W +L +A+G R +M E+I+ N Y +
Sbjct: 452 VE-NVVLWNVML---VAYGLLDDLRNSFRIFRQMQIEEIV----PNQYTYPSILKTCIRL 503
Query: 646 EDWEGSAQVRELMIDKNVQ 664
D E Q+ +I N Q
Sbjct: 504 GDLELGEQIHSQIIKTNFQ 522
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 43/336 (12%)
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
+++H+ K+G+ + ++ L D Y F G+L
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFY----------LFKGDLYG---------------- 138
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
A +FD M +T+ +WN ++ LA E +F RM ++ ++ +F+ V+
Sbjct: 139 -----AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 437 SACASKS-CLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
AC S ++ EQ+ + + GL ++ L+D Y + GFV++ R+VFDG+ D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT 555
SW ++ G + N +EA+ LF +M G+ P+ F++VLSAC +E G L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 556 MKHNYNINPEIEHYSC--MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN 613
+ + + Y C +V LY G L A + M Q DA + +++ G G
Sbjct: 314 V---LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG- 368
Query: 614 RTIGKMAAE--KIIQLDPENPGAYIQLSNVLATSED 647
G+ A E K + LD P + S V+A S D
Sbjct: 369 --YGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 206/711 (28%), Positives = 337/711 (47%), Gaps = 113/711 (15%)
Query: 9 GRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP---QTNAFS 65
R R G+ +H ++ I S+ N L+ YS+ G A +F+ M + + S
Sbjct: 75 ARDFRLGKLVHARLIEFDIEPDSVLY-NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVS 133
Query: 66 WNTLIEAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSA-----FAKSGDLQL---- 112
W+ ++ + ++G +++++F E Y + ++ A F G + L
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193
Query: 113 ----------------------------AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKA 144
A+ +FD M N + W +I + G PR+A
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA 253
Query: 145 LSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCS 204
+ F M L E D L++V ACA+ L+ GKQ+H+ I G+ D V CS
Sbjct: 254 IRFFLDMVLSGFE---SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL---VDDVECS 307
Query: 205 SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL 264
LV Y KC + G + + R+VFD D +
Sbjct: 308 -LVDMYAKC----------------------------SADGSVDDCRKVFDRMEDHSVMS 338
Query: 265 WNSIISGYVLNGE-EMEALALFKRMRRHG-VSGDVSTVANILSAGCSLLVVELVKQMHAH 322
W ++I+GY+ N EA+ LF M G V + T ++ A +L + KQ+
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
A K G+ + VA N++I+++ R+EDA
Sbjct: 399 AFKRGLASNSSVA-------------------------------NSVISMFVKSDRMEDA 427
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
+ F+++S K L+S+N+ L G +N +A + + +L + F+FAS++S A+
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL 502
+ GEQ+ + + +GL + + +L+ Y KCG ++ +VF+ M + +SW +++
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
G+A +G+ L F +M GV+P+ +T+ A+LSAC H GLV EG F++M ++ I
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKI 607
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAE 622
P++EHY+CMVDL RAG L +A + I MPFQAD +W + L C H N +GK+AA
Sbjct: 608 KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAAR 667
Query: 623 KIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
KI++LDP P AYIQLSN+ A + WE S ++R M ++N+ K GCSW +
Sbjct: 668 KILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIE 718
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 149/650 (22%), Positives = 272/650 (41%), Gaps = 103/650 (15%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL-IEAHLHSGHRNESLRL- 85
+++ + A+RL+ + G L A D M + +++ + L S R RL
Sbjct: 22 VSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG 81
Query: 86 ---------FHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP---CKNGLVWNTIIH 133
F P+ Y N L+S ++KSGD A +F++M ++ + W+ ++
Sbjct: 82 KLVHARLIEFDIEPDSVLY--NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMA 139
Query: 134 GYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEG 193
Y G A+ +F + L +V D A V+ AC++ + G+ ++ G
Sbjct: 140 CYGNNGRELDAIKVF--VEFLELGLVPNDYCYTA-VIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 194 IELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRV 253
E D + SL+ + VK + F A +V
Sbjct: 197 -HFESDVCVGCSLIDMF---------------VKGENSF---------------ENAYKV 225
Query: 254 FDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVV 313
FD + V W +I+ + G EA+ F M G D T++++ SA L +
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 314 ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVY 373
L KQ+H+ A + G+ D V +L+D Y+K
Sbjct: 286 SLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSAD------------------------- 318
Query: 374 SNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA-CPSEAIDIFCRM-NMLDLKMDKFS 431
G ++D + +FD M +++SW +++ G KN +EAI++F M ++ + F+
Sbjct: 319 ---GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI 491
F+S AC + S +G+QV G+A GL + ++ S++ + K +E ++ F+ +
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN 551
+ + VS+NT L G N +A L E+ + SA TF ++LS + G + +G
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 552 LF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM--WFSVLRGC 608
+ +K + N + + ++ +Y++ G + A + F + N+ W S++ G
Sbjct: 496 IHSQVVKLGLSCNQPV--CNALISMYSKCGSIDTASRVFN---FMENRNVISWTSMITGF 550
Query: 609 IAHGN-----RTIGKMAAEKIIQLDPENPGAYIQL----SNVLATSEDWE 649
HG T +M E + N Y+ + S+V SE W
Sbjct: 551 AKHGFAIRVLETFNQMIEEGV----KPNEVTYVAILSACSHVGLVSEGWR 596
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 316/608 (51%), Gaps = 48/608 (7%)
Query: 74 LHSGHRNESLRLFHAMPEK-----THYSWNMLVSAFAKSGD---LQLAHSLFDSMPCKNG 125
LH+ +SLR+ HA K T+Y+ + L+ S L A S+F ++ N
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 126 LVWNTIIHGYSKRGHPRKALSLFKTM-SLDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
L+WNT+ G++ P AL L+ M SL L ++ VL +CA A G+Q
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLP----NSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 185 VHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANA 244
+H V+ G +L D + +SL+ Y + G L+ A +V D S +AL+ GYA+
Sbjct: 156 IHGHVLKLGCDL--DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 245 GKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANIL 304
G + A+++FD + V WN++ISGY G EAL LFK M + V D ST+ ++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 305 SAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTI 364
SA +EL +Q+H G ++ + +AL+D
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID------------------------ 309
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD 424
+YS CG +E A +F+ + K +ISWN+++ G EA+ +F M
Sbjct: 310 -------LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 425 LKMDKFSFASVISACASKSCLELGE--QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEI 482
+ + S++ ACA +++G V+ G+ + TSL+D Y KCG +E
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 483 GRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
+VF+ ++ SWN ++ G+A +G + LF MR G++P ITF +LSAC H
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
+G+++ GR++F TM +Y + P++EHY CM+DL +G EA ++I M + D +W
Sbjct: 483 SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWC 542
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
S+L+ C HGN +G+ AE +I+++PENPG+Y+ LSN+ A++ W A+ R L+ DK
Sbjct: 543 SLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKG 602
Query: 663 VQKIPGCS 670
++K+PGCS
Sbjct: 603 MKKVPGCS 610
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 195/445 (43%), Gaps = 101/445 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
+ +EG+Q+H LK G + L L+ Y + G L+DA ++FD+
Sbjct: 148 KAFKEGQQIHGHVLKLGC-DLDLYVHTSLISMYVQNGRLEDAHKVFDK------------ 194
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
S HR+ S+ L+ +A G ++ A LFD +P K+ + WN
Sbjct: 195 ------SPHRDV-------------VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWN 235
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
+I GY++ G+ ++AL LFK M V D + TV+ ACA ++ G+QVH +
Sbjct: 236 AMISGYAETGNYKEALELFKDMM---KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
G V ++L+ Y KCG+L++A + + D S + L+ GY + +
Sbjct: 293 DDHGFGSNLKIV--NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK- 349
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
EAL LF+ M R G + + T+ +IL A
Sbjct: 350 ------------------------------EALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 310 LLVVELVKQMHAHACK--IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLN 367
L +++ + +H + K GVT+ + ++L+D Y+K
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK----------------------- 416
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM 427
CG IE A +F+++ K+L SWN+++ G A + + D+F RM + ++
Sbjct: 417 --------CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 428 DKFSFASVISACASKSCLELGEQVF 452
D +F ++SAC+ L+LG +F
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIF 493
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 191/698 (27%), Positives = 340/698 (48%), Gaps = 109/698 (15%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
L+ + LH + + + + +A +L+ Y G + A FD + + ++WN +I
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISA-KLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 71 EAHLHSGHRNESLRLF--------------------------------HAMPEKTHYSWN 98
+ +G+ +E +R F H + K + W+
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWD 184
Query: 99 MLVSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
+ V+A +++ + A LFD MP ++ WN +I GY + G+ ++AL+L +
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
D+ + ++L AC + N G +H+ I G+E E
Sbjct: 245 -------MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL--------------- 282
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
F + L+ YA G++R+ ++VFD + + WNSII Y
Sbjct: 283 ------------------FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
LN + + A++LF+ MR + D T+ ++ S L + + + + G
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG------ 378
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
+F E D + N ++ +Y+ G ++ A+ +F+ + +
Sbjct: 379 --------------------WFLE----DITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNML-DLKMDKFSFASVISACASKSCLELGEQVF 452
+ISWN+I+ G A+N SEAI+++ M ++ ++ ++ SV+ AC+ L G ++
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGS 512
G+ + GL D + TSL D Y KCG +E +F + + + V WNT++ + +G+G
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
+A+ LF+EM GV+P ITF +LSAC H+GLV+EG+ F+ M+ +Y I P ++HY CM
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 573 VDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENP 632
VD+Y RAG L A+ I+ M Q DA++W ++L C HGN +GK+A+E + +++PE+
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
G ++ LSN+ A++ WEG ++R + K ++K PG S
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 141/620 (22%), Positives = 244/620 (39%), Gaps = 141/620 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
RT+ +G ++H LK G + A+ L+ YSR + +A LFDEMP + SWN +
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAAS-LIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 222
Query: 70 IEAHLHSGHRNESLRLFHAMP-----------------------------------EKTH 94
I + SG+ E+L L + + E
Sbjct: 223 ISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
+ N L+ +A+ G L+ +FD M ++ + WN+II Y P +A+SLF+ M L
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
++ LA++L D A + V + +G LE D + +++V Y K G
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRAC---RSVQGFTLRKGWFLE-DITIGNAVVVMYAKLG 398
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
+DSA V + D S + ++SGYA
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQ------------------------------- 427
Query: 275 NGEEMEALALFKRMRRHG-VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
NG EA+ ++ M G ++ + T ++L A + ++H K G+ D+
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 487
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
V ++L D Y K CGR+EDA +F +
Sbjct: 488 VVTSLADMYGK-------------------------------CGRLEDALSLFYQIPRVN 516
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
+ WN+++ + +A+ +F M +K D +F +++SAC+ ++ G+ F
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
++ D+ I+ SL + C Y G
Sbjct: 577 M-----MQTDYGITPSLKHYGCMVDM-------------------------YGRAGQLET 606
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPE-IEHYSCM 572
AL + M ++P A + A+LSAC G V+ G+ +H + + PE + ++ +
Sbjct: 607 ALKFIKSM---SLQPDASIWGALLSACRVHGNVDLGK---IASEHLFEVEPEHVGYHVLL 660
Query: 573 VDLYARAGCLGEAIDLIEEM 592
++YA AG E +D I +
Sbjct: 661 SNMYASAGKW-EGVDEIRSI 679
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 169/571 (29%), Positives = 304/571 (53%), Gaps = 36/571 (6%)
Query: 101 VSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVH 160
++A + L+ A +FD +P N WNT+I Y+ P LS++ + + +
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA--SGPDPVLSIWAFLDMVSESQCY 128
Query: 161 CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
+ ++ A A+ +L+ G+ +H + + D + +SL+ Y CGDLDSA
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG--SDVFVANSLIHCYFSCGDLDSAC 186
Query: 221 RVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEME 280
+ VF + ++ V WNS+I+G+V G +
Sbjct: 187 K-------------------------------VFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
AL LFK+M V T+ +LSA + +E +Q+ ++ + V ++ +A+A+LD
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSI 400
Y+K +A + F ++ D + TM+ Y+ E A+ + ++M K +++WN++
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 401 LVGLAKNACPSEAIDIFCRMNML-DLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
+ +N P+EA+ +F + + ++K+++ + S +SACA LELG + G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
+ + ++++L+ Y KCG +E R+VF+ + K D W+ ++ G A +G G+EA+ +F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
+M+ + V+P+ +TFT V AC HTGLV+E +LF M+ NY I PE +HY+C+VD+ R+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G L +A+ IE MP ++W ++L C H N + +MA ++++L+P N GA++ LS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 640 NVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
N+ A WE +++R+ M ++K PGCS
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 253/537 (47%), Gaps = 82/537 (15%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQF--YSRRGCLDDATQLFDEMPQTNAFSWNT 68
+LR+ +Q H ++TG S +A++L S L+ A ++FDE+P+ N+F+WNT
Sbjct: 42 SLRQLKQTHGHMIRTGTF-SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 69 LIEAH--------------------------------LHSGHRNESLRL---FHAMPEKT 93
LI A+ + + SL L H M K+
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 94 H-----YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
+ N L+ + GDL A +F ++ K+ + WN++I+G+ ++G P KAL LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
K M + ++ H + VL ACA L G+QV + +E + + L ++++
Sbjct: 221 KKMESEDVKASHV---TMVGVLSACAKIRNLEFGRQVCS--YIEENRVNVNLTLANAMLD 275
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
Y KCG ++ A R+ ++E D+ + + ++ GYA + AR V +S + V WN++
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 269 ISGYVLNGEEMEALALFKRMR-RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
IS Y NG+ EAL +F ++ + + + T+ + LSA + +EL + +H++ K G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFD 387
+ + V SAL+ YSK CG +E ++ +F+
Sbjct: 396 IRMNFHVTSALIHMYSK-------------------------------CGDLEKSREVFN 424
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
++ + + W++++ GLA + C +EA+D+F +M ++K + +F +V AC+ ++
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 448 GEQVFGKAIT-VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
E +F + + G+ + +VD + G++E K + M I W +L
Sbjct: 485 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 178/419 (42%), Gaps = 70/419 (16%)
Query: 230 DDFSLSAL--VSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEAL-ALFK 286
D +S S L ++ ++ + AR+VFD + WN++I Y + + ++ A
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120
Query: 287 RMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
+ + T ++ A + + L + +H A K V D+ VA++L+ Y
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 347 GPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAK 406
ACK F +K D + N+MI G +
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMIN-------------------------------GFVQ 209
Query: 407 NACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHII 466
P +A+++F +M D+K + V+SACA LE G QV + + +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 467 STSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYA-------------------- 506
+ +++D Y KCG +E +++FD M + D V+W T+L GYA
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 507 -----------TNGYGSEALTLFREMRCS-GVRPSAITFTAVLSACDHTGLVEEGRNLFD 554
NG +EAL +F E++ ++ + IT + LSAC G +E GR +
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 555 TM-KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ KH +N + S ++ +Y++ G L ++ ++ + + D +W +++ G HG
Sbjct: 390 YIKKHGIRMNFHVT--SALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 40/284 (14%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R L GRQ+ S+++ +N +LT AN +L Y++ G ++DA
Sbjct: 246 RNLEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK----------------- 287
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
RLF AM EK + +W ++ +A S D + A + +SMP K+ + WN
Sbjct: 288 --------------RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
+I Y + G P +AL +F + L + + + L + L ACA AL G+ +H+ +
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQ--KNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
GI + F + S+L+ Y KCGDL+ + V V++ D F SA++ G A G E
Sbjct: 392 KKHGIRMNFH--VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 250 ARRVF----DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
A +F ++ V V + ++ G EA +LF +M
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 36/295 (12%)
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
+KQ H H + G D P+ A K F + S+
Sbjct: 46 LKQTHGHMIRTGTFSD----------------PYSASKLFA-------------MAALSS 76
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM---DKFSF 432
+E A+ +FD + +WN+++ A P + I+ ++M+ +K++F
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASG--PDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK 492
+I A A S L LG+ + G A+ + D ++ SL+ Y CG ++ KVF + +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNL 552
D VSWN+++ G+ G +AL LF++M V+ S +T VLSAC +E GR +
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 553 FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
++ N +N + + M+D+Y + G + +A L + M + D W ++L G
Sbjct: 255 CSYIEEN-RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 21/230 (9%)
Query: 12 LREGRQLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
L GR +H K GI +N +T+A L+ YS+ G L+ + ++F+ + + + F W+ +I
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSA--LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 71 EAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
G NE++ +F+ M E ++ + A + +G + A SLF M G+
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 498
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
V + I+ + G+ KA+ + M + P V +LGAC LN
Sbjct: 499 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP------STSVWGALLGACKIHANLNL 552
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGK---CGDLDSAARVAGVVKE 228
+ R++ + VL S++ GK +L RV G+ KE
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 331/702 (47%), Gaps = 98/702 (13%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H K G S+T AN L+ Y + G ++FD + + N SWN+LI +
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 75 HSGHRNESLRLFH------------------------AMPE------KTH---------- 94
+L F MPE + H
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 95 -YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
+ N LV+ + K G L + L S ++ + WNT++ + +AL + M
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV- 294
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
LE V D +++VL AC+ L GK++HA + K
Sbjct: 295 --LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL---------------------KN 331
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
G LD + F SALV Y N ++ RRVFD D+ LWN++I+GY
Sbjct: 332 GSLDE-----------NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 274 LNGEEMEALALFKRMRRH-GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
N + EAL LF M G+ + +T+A ++ A + +H K G+ D
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
V + L+D YS+ A + FG+++ D + NTMIT Y EDA + M
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM--- 497
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
++ ++K A + + LK + + +++ +CA+ S L G+++
Sbjct: 498 -----QNLERKVSKGA------------SRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGS 512
AI L D + ++LVD Y KCG +++ RKVFD + + + ++WN I+M Y +G G
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
EA+ L R M GV+P+ +TF +V +AC H+G+V+EG +F MK +Y + P +HY+C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 573 VDLYARAGCLGEAIDLIEEMPFQAD-ANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
VDL RAG + EA L+ MP + A W S+L H N IG++AA+ +IQL+P
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
Y+ L+N+ +++ W+ + +VR M ++ V+K PGCSW +
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 133/352 (37%), Gaps = 94/352 (26%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
LR G++LH LK G L+ + + L+ Y + ++FD M WN +I
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 72 AHLHSGHRNESLRLFHAMPE---------------------------------------- 91
+ + H E+L LF M E
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 92 KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
+ + N L+ +++ G + +A +F M ++ + WNT+I GY H AL L M
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 152 --------------SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE 197
SL P ++ L T+L +CA AL GK++HA I L
Sbjct: 498 QNLERKVSKGASRVSLKP------NSITLMTILPSCAALSALAKGKEIHAYAIKNN--LA 549
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSR 257
D + S+LV Y KCG L + +R+VFD
Sbjct: 550 TDVAVGSALVDMYAKCGCL-------------------------------QMSRKVFDQI 578
Query: 258 VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
+ + WN II Y ++G EA+ L + M GV + T ++ +A CS
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA-CS 629
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
W +L ++ EA+ + M +L +K D ++F +++ A A +ELG+Q+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 457 TVGLEFDHI-ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
G D + ++ +LV+ Y KCG KVFD + + ++VSWN+++ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVE 547
FR M V PS+ T +V++AC + + E
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 45/152 (29%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L +G+++H +K L + + + L+ Y++ GCL + ++FD++PQ N +WN +I
Sbjct: 533 LAKGKEIHAYAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 72 AH-----------------------------------LHSGHRNESLRLFHAM------- 89
A+ HSG +E LR+F+ M
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 90 PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP 121
P HY+ +V ++G ++ A+ L + MP
Sbjct: 652 PSSDHYA--CVVDLLGRAGRIKEAYQLMNMMP 681
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 333/697 (47%), Gaps = 108/697 (15%)
Query: 19 HVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGH 78
H +K G + S + +NR+L Y + G L A LFDEMP+ ++ SWNT+I + G
Sbjct: 23 HCYAIKCGSI-SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 79 RNESLRLFHAMP---------------------------EKTH------------YSWNM 99
++ LF M E+ H Y +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
LV +AK ++ A F + N + WN +I G+ + + A L M + V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA--AV 199
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
DAG A +L D N KQVHA+V+ G++ E +C+
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEI--TICN--------------- 242
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL-WNSIISGYVLNGEE 278
A++S YA+ G + +A+RVFD ++ WNS+I+G+ + +
Sbjct: 243 ----------------AMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELK 286
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV-KQMHAHACKIGVTHDIVVASA 337
A LF +M+RH V D+ T +LSA CS ++ K +H K G+ +A
Sbjct: 287 ESAFELFIQMQRHWVETDIYTYTGLLSA-CSGEEHQIFGKSLHGMVIKKGLEQVTSATNA 345
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
L+ Y Q P G +EDA +F+++ SK LISW
Sbjct: 346 LISMYI--QFP---------------------------TGTMEDALSLFESLKSKDLISW 376
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
NSI+ G A+ +A+ F + ++K+D ++F++++ +C+ + L+LG+Q+ A
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI-KTDEVSWNTILMGYATNGYGSEALT 516
G + + +SL+ Y KCG +E RK F + K V+WN +++GYA +G G +L
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496
Query: 517 LFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLY 576
LF +M V+ +TFTA+L+AC HTGL++EG L + M+ Y I P +EHY+ VDL
Sbjct: 497 LFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLL 556
Query: 577 ARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYI 636
RAG + +A +LIE MP D + + L C A G + A +++++PE+ Y+
Sbjct: 557 GRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYV 616
Query: 637 QLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
LS++ + + WE A V+++M ++ V+K+PG SW +
Sbjct: 617 SLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIE 653
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNA-FSWNTL 69
TL+ G+Q+H K+G +++ ++ L+ YS+ G ++ A + F ++ ++ +WN +
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISS-LIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481
Query: 70 IEAHLHSGHRNESLRLFHAMPEKT----HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
I + G SL LF M + H ++ +++A + +G +Q L + M
Sbjct: 482 ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYK 541
Query: 126 LV-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
+ + + + G KA L ++M L+P D VL T LG C C +
Sbjct: 542 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNP------DPMVLKTFLGVCRACGEIE 595
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
QV ++ E F V SL Y + A V ++KE
Sbjct: 596 MATQVANHLLEIEPEDHFTYV---SLSHMYSDLKKWEEKASVKKMMKE 640
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/641 (27%), Positives = 310/641 (48%), Gaps = 84/641 (13%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKT 93
TAN + SR G + +A +LFD + SWN+++ + + ++ +LF MP++
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 94 HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
SWN LVS + K+G++ A +FD MP +N + W ++ GY G A SLF M
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP- 137
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
E +KV + ++ + +
Sbjct: 138 -------------------------------------------EKNKVSWTVMLIGFLQD 154
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
G +D A ++ ++ + D+ + ++++ G G++ EAR +FD ++ + W ++++GY
Sbjct: 155 GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYG 214
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
N +A +F M V
Sbjct: 215 QNNRVDDARKIFDVMPEKTE---------------------------------------V 235
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
+++L Y ++ +A + F + I N MI+ G I A+ +FD+M +
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
SW +++ +N EA+D+F M ++ + S++S CAS + L G+QV
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
+ + + D +++ L+ Y KCG + + +FD D + WN+I+ GYA++G G E
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 514 ALTLFREMRCSG-VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
AL +F EM SG +P+ +TF A LSAC + G+VEEG ++++M+ + + P HY+CM
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 573 VDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENP 632
VD+ RAG EA+++I+ M + DA +W S+L C H + + A+K+I+++PEN
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
G YI LSN+ A+ W A++R+LM + V+K PGCSW +
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTE 576
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 229/517 (44%), Gaps = 96/517 (18%)
Query: 29 NSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHA 88
+ S+++ N ++ Y DA +LFDEMP N SWN L+ ++ +G +E+ ++F
Sbjct: 45 SKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 89 MPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
MPE+ SW LV + +G + +A SLF MP KN + W ++ G+ + G A L+
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 149 KTMSLDPLEMVHCDAGVLATVL--GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
EM+ + T + G C + G+ AR I + + E + +++
Sbjct: 165 --------EMIPDKDNIARTSMIHGLCKE------GRVDEAREIFDEMS-ERSVITWTTM 209
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE----------------- 249
V YG+ +D A ++ V+ E + S ++++ GY G++ +
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 250 --------------ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
ARRVFDS ++ W ++I + NG E+EAL LF M++ GV
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 296 DVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFF 355
T+ +ILS SL + KQ+HA + D+ VAS L+
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM---------------- 373
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAID 415
T+Y CG + +K IFD SK +I WNSI+ G A + EA+
Sbjct: 374 ---------------TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALK 418
Query: 416 IFCRMNML-DLKMDKFSFASVISACASKSCLELG-------EQVFG-KAITVGLEFDHII 466
+FC M + K ++ +F + +SAC+ +E G E VFG K IT
Sbjct: 419 VFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY------ 472
Query: 467 STSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+VD + G ++ D M ++ D W ++L
Sbjct: 473 -ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 196/663 (29%), Positives = 319/663 (48%), Gaps = 78/663 (11%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHY 95
N+ L R G + +A +F+++ N +WNT+I ++ N++ +LF MP++
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 96 SWNMLVSAFAKSGDLQL---AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
+WN ++S + G ++ A LFD MP ++ WNT+I GY+K +AL LF+ M
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
A + G C + G+ A V+ + ++ LC+ LV K
Sbjct: 164 ------ERNAVSWSAMITGFCQN------GEVDSAVVLFRKMPVKDSSPLCA-LVAGLIK 210
Query: 213 CGDLDSAARVAG----VVKEVDD--FSLSALVSGYANAGKMREARRVFDSRVDQCA---- 262
L AA V G +V +D ++ + L+ GY G++ AR +FD D C
Sbjct: 211 NERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 263 -----------VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
V WNS+I Y+ G+ + A LF +M+
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK---------------------- 308
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMIT 371
D + + ++D Y +A F E+ D N M++
Sbjct: 309 -----------------DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVS 351
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
Y++ G +E A+ F+ K +SWNSI+ KN EA+D+F RMN+ K D +
Sbjct: 352 GYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT 411
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM- 490
S++SA L LG Q+ + + D + +L+ Y +CG + R++FD M
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR 550
+K + ++WN ++ GYA +G SEAL LF M+ +G+ PS ITF +VL+AC H GLV+E +
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 551 NLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIA 610
F +M Y I P++EHYS +V++ + G EA+ +I MPF+ D +W ++L C
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 611 HGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+ N + +AAE + +L+PE+ Y+ L N+ A W+ ++QVR M K ++K G S
Sbjct: 591 YNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Query: 671 WAD 673
W D
Sbjct: 651 WVD 653
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 238/546 (43%), Gaps = 108/546 (19%)
Query: 33 TTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSG---HRNESLRLFHAM 89
T N ++ Y +R ++ A +LFD MP+ + +WNT+I ++ G E+ +LF M
Sbjct: 72 VTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM 131
Query: 90 PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
P + +SWN ++S +AK+ + A LF+ MP +N + W+ +I G+ + G A+ LF+
Sbjct: 132 PSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFR 191
Query: 150 TMSL-DPLEMVHCDAGVL--------ATVLGACAD--------CFALNC--------GKQ 184
M + D + AG++ A VLG +A N G+
Sbjct: 192 KMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQV 251
Query: 185 VHARVIVEGIEL--------EFDKVLC------SSLVKFYGKCGDLDSAARVAGVVKEVD 230
AR + + I EF + C +S++K Y K GD+ SA + +K+ D
Sbjct: 252 EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD 311
Query: 231 DFSLSA-------------------------------LVSGYANAGKMREARRVFDSRVD 259
S + +VSGYA+ G + AR F+ +
Sbjct: 312 TISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPE 371
Query: 260 QCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQM 319
+ V WNSII+ Y N + EA+ LF RM G D T+ ++LSA L+ + L QM
Sbjct: 372 KHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM 431
Query: 320 HAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRI 379
H K V D+ V +AL+ YS+ CG I
Sbjct: 432 HQIVVKT-VIPDVPVHNALITMYSR-------------------------------CGEI 459
Query: 380 EDAKWIFDTMS-SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISA 438
+++ IFD M + +I+WN+++ G A + SEA+++F M + +F SV++A
Sbjct: 460 MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 439 CASKSCLELGEQVFGKAITV-GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEV 496
CA ++ + F ++V +E +SLV+ G E + M + D+
Sbjct: 520 CAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKT 579
Query: 497 SWNTIL 502
W +L
Sbjct: 580 VWGALL 585
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 325/621 (52%), Gaps = 15/621 (2%)
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPC 122
A S N L+ + SG E+ +F M E+ YSWN +++A+ K +++ A LF+S C
Sbjct: 23 AVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNC 82
Query: 123 KNGLV-WNTIIHGYSKR-GHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
+ L+ +NT++ G++K G +A+ +F M + + D + T++ A +
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV--AGVVKEVDDFSLSALV 238
G+Q+H ++ G + K SSL+ Y KCG + V+ VD + +A++
Sbjct: 143 YGEQLHGVLVKTGND--GTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMI 200
Query: 239 SGYANAGKMREARRVFDSRVD-QCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDV 297
+ Y G + +A VF + + WN++I+GY NG E EAL + M +G+ D
Sbjct: 201 AAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDE 260
Query: 298 STVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSK---SQGPHEACKF 354
+ +L+ SL +++ K++HA K G + V+S ++D Y K + A
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLL 320
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
+G Y ++MI YS+ G++ +AK +FD++S K L+ W ++ +G P +
Sbjct: 321 YGFGNLYSA---SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVL 377
Query: 415 DIFCRMNMLDLKM-DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDF 473
++ + D SV+ AC+ ++ +E G+++ G ++ G+ D + T+ VD
Sbjct: 378 ELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDM 437
Query: 474 YCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITF 533
Y KCG VE ++FD + D V +N ++ G A +G+ +++ F +M G +P ITF
Sbjct: 438 YSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITF 497
Query: 534 TAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM- 592
A+LSAC H GLV EG F +M YNI+PE HY+CM+DLY +A L +AI+L+E +
Sbjct: 498 MALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGID 557
Query: 593 PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSA 652
+ DA + + L C + N + K EK++ ++ N YIQ++N A+S W+
Sbjct: 558 QVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQ 617
Query: 653 QVRELMIDKNVQKIPGCSWAD 673
++R M K ++ GCSWA+
Sbjct: 618 RIRHQMRGKELEIFSGCSWAN 638
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 12 LREGRQLHVSFLKTGIL-NSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+ G+++H L+TGIL + L TA + YS+ G ++ A ++FD + + +N +I
Sbjct: 409 MEPGKEIHGHSLRTGILMDKKLVTA--FVDMYSKCGNVEYAERIFDSSFERDTVMYNAMI 466
Query: 71 EAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
H GH +S + F M E ++ L+SA G + F SM +
Sbjct: 467 AGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNI 526
Query: 127 VWNT-----IIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
T +I Y K KA+ L ++ ++ V DA +L L AC+
Sbjct: 527 SPETGHYTCMIDLYGKAYRLDKAIEL-----MEGIDQVEKDAVILGAFLNACSWNKNTEL 581
Query: 182 GKQVHARVIV 191
K+V +++V
Sbjct: 582 VKEVEEKLLV 591
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 202/700 (28%), Positives = 325/700 (46%), Gaps = 114/700 (16%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GRQ+ +K+G L S L N L+ G +D A +FD+M + + SWN++ A+
Sbjct: 162 GRQIIGQVVKSG-LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 75 HSGHRNESLRLFHAMPE-------------------KTHYSW------------------ 97
+GH ES R+F M H W
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 280
Query: 98 --NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
N L+ +A +G A+ +F MP K+ + WN+++ + G AL L +M
Sbjct: 281 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 340
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
+ + + L AC G+ +H V+V G L +++++ ++LV YGK
Sbjct: 341 KSVNYV---TFTSALAACFTPDFFEKGRILHGLVVVSG--LFYNQIIGNALVSMYGKI-- 393
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
G+M E+RRV + V WN++I GY +
Sbjct: 394 -----------------------------GEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL--VVELVKQMHAHACKIGVTHDIV 333
+ +ALA F+ MR GVS + TV ++LSA C L ++E K +HA+ G D
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSA-CLLPGDLLERGKPLHAYIVSAGFESD-- 481
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
E K N++IT+Y+ CG + ++ +F+ + ++
Sbjct: 482 ----------------EHVK-------------NSLITMYAKCGDLSSSQDLFNGLDNRN 512
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
+I+WN++L A + E + + +M + +D+FSF+ +SA A + LE G+Q+ G
Sbjct: 513 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG 572
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGR--KVFDGMIKTDEVSWNTILMGYATNGYG 511
A+ +G E D I + D Y KCG EIG K+ + SWN ++ +GY
Sbjct: 573 LAVKLGFEHDSFIFNAAADMYSKCG--EIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 630
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
E F EM G++P +TF ++L+AC H GLV++G +D + ++ + P IEH C
Sbjct: 631 EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 690
Query: 572 MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
++DL R+G L EA I +MP + + +W S+L C HGN G+ AAE + +L+PE+
Sbjct: 691 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 750
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
Y+ SN+ AT+ WE VR+ M KN++K CSW
Sbjct: 751 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 790
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/625 (23%), Positives = 261/625 (41%), Gaps = 117/625 (18%)
Query: 9 GRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNT 68
G REG Q+H K+G+L S + + +L Y G + + ++F+EMP N SW +
Sbjct: 55 GSMFREGVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 113
Query: 69 LIEAHLHSGHRNESLRLFHAMP-------------------------------------- 90
L+ + G E + ++ M
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 173
Query: 91 -EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
E N L+S G++ A+ +FD M ++ + WN+I Y++ GH ++ +F
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
M E+ L +VLG G+ +H V+ G FD V+C
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDH---QKWGRGIHGLVVKMG----FDSVVCVC---- 282
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
+ L+ YA AG+ EA VF + + WNS++
Sbjct: 283 -------------------------NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 317
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
+ +V +G ++AL L M G S + T + L+A + E K +
Sbjct: 318 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE----------KGRIL 367
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
H +VV S L Y+ I+ N ++++Y G + +++ + M
Sbjct: 368 HGLVVVSGLF---------------------YNQIIGNALVSMYGKIGEMSESRRVLLQM 406
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISAC-ASKSCLELG 448
+ +++WN+++ G A++ P +A+ F M + + + + SV+SAC LE G
Sbjct: 407 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
+ + ++ G E D + SL+ Y KCG + + +F+G+ + ++WN +L A +
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
G+G E L L +MR GV +F+ LSA ++EEG+ L H + EH
Sbjct: 527 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-----HGLAVKLGFEH 581
Query: 569 ----YSCMVDLYARAGCLGEAIDLI 589
++ D+Y++ G +GE + ++
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKML 606
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 130/542 (23%), Positives = 226/542 (41%), Gaps = 109/542 (20%)
Query: 120 MPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAG------VLATVLGAC 173
MP +N + WNT++ G + G + + F+ M CD G V+A+++ AC
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM---------CDLGIKPSSFVIASLVTAC 51
Query: 174 ADCFAL-NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
++ G QVH V G L D + ++++ YG G
Sbjct: 52 GRSGSMFREGVQVHGFVAKSG--LLSDVYVSTAILHLYGVYG------------------ 91
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
LVS +R+VF+ D+ V W S++ GY GE E + ++K MR G
Sbjct: 92 ----LVSC---------SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG 138
Query: 293 VSGDVSTVANILSAGCSLLVVE-LVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEA 351
V + ++++ ++S+ C LL E L +Q+ K G+ + V
Sbjct: 139 VGCNENSMSLVISS-CGLLKDESLGRQIIGQVVKSGLESKLAVE---------------- 181
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
N++I++ + G ++ A +IFD MS + ISWNSI A+N
Sbjct: 182 ---------------NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 226
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLV 471
E+ IF M +++ + ++++S + G + G + +G + + +L+
Sbjct: 227 ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 286
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
Y G VF M D +SWN+++ + +G +AL L M SG + +
Sbjct: 287 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 346
Query: 532 TFTAVLSACDHTGLVEEGRNL-----FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
TFT+ L+AC E+GR L + +N I + +V +Y + G + E+
Sbjct: 347 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG------NALVSMYGKIGEMSESR 400
Query: 587 DLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE 646
++ +MP + D W N IG A ++ DP+ A Q V S
Sbjct: 401 RVLLQMP-RRDVVAW-----------NALIGGYAEDE----DPDKALAAFQTMRVEGVSS 444
Query: 647 DW 648
++
Sbjct: 445 NY 446
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 202/700 (28%), Positives = 325/700 (46%), Gaps = 114/700 (16%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GRQ+ +K+G L S L N L+ G +D A +FD+M + + SWN++ A+
Sbjct: 179 GRQIIGQVVKSG-LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 75 HSGHRNESLRLFHAMPE-------------------KTHYSW------------------ 97
+GH ES R+F M H W
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 98 --NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
N L+ +A +G A+ +F MP K+ + WN+++ + G AL L +M
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
+ + + L AC G+ +H V+V G L +++++ ++LV YGK
Sbjct: 358 KSVNYV---TFTSALAACFTPDFFEKGRILHGLVVVSG--LFYNQIIGNALVSMYGKI-- 410
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
G+M E+RRV + V WN++I GY +
Sbjct: 411 -----------------------------GEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL--VVELVKQMHAHACKIGVTHDIV 333
+ +ALA F+ MR GVS + TV ++LSA C L ++E K +HA+ G D
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSA-CLLPGDLLERGKPLHAYIVSAGFESD-- 498
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
E K N++IT+Y+ CG + ++ +F+ + ++
Sbjct: 499 ----------------EHVK-------------NSLITMYAKCGDLSSSQDLFNGLDNRN 529
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
+I+WN++L A + E + + +M + +D+FSF+ +SA A + LE G+Q+ G
Sbjct: 530 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG 589
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGR--KVFDGMIKTDEVSWNTILMGYATNGYG 511
A+ +G E D I + D Y KCG EIG K+ + SWN ++ +GY
Sbjct: 590 LAVKLGFEHDSFIFNAAADMYSKCG--EIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 647
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
E F EM G++P +TF ++L+AC H GLV++G +D + ++ + P IEH C
Sbjct: 648 EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 707
Query: 572 MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
++DL R+G L EA I +MP + + +W S+L C HGN G+ AAE + +L+PE+
Sbjct: 708 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 767
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
Y+ SN+ AT+ WE VR+ M KN++K CSW
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 807
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/625 (23%), Positives = 261/625 (41%), Gaps = 117/625 (18%)
Query: 9 GRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNT 68
G REG Q+H K+G+L S + + +L Y G + + ++F+EMP N SW +
Sbjct: 72 GSMFREGVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 69 LIEAHLHSGHRNESLRLFHAMP-------------------------------------- 90
L+ + G E + ++ M
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 91 -EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
E N L+S G++ A+ +FD M ++ + WN+I Y++ GH ++ +F
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
M E+ L +VLG G+ +H V+ G FD V+C
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDH---QKWGRGIHGLVVKMG----FDSVVCVC---- 299
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
+ L+ YA AG+ EA VF + + WNS++
Sbjct: 300 -------------------------NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 334
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
+ +V +G ++AL L M G S + T + L+A + E K +
Sbjct: 335 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE----------KGRIL 384
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
H +VV S L Y+ I+ N ++++Y G + +++ + M
Sbjct: 385 HGLVVVSGLF---------------------YNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISAC-ASKSCLELG 448
+ +++WN+++ G A++ P +A+ F M + + + + SV+SAC LE G
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
+ + ++ G E D + SL+ Y KCG + + +F+G+ + ++WN +L A +
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
G+G E L L +MR GV +F+ LSA ++EEG+ L H + EH
Sbjct: 544 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-----HGLAVKLGFEH 598
Query: 569 ----YSCMVDLYARAGCLGEAIDLI 589
++ D+Y++ G +GE + ++
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKML 623
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 233/558 (41%), Gaps = 109/558 (19%)
Query: 104 FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDA 163
+ K G ++ A LFD MP +N + WNT++ G + G + + F+ M CD
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM---------CDL 52
Query: 164 G------VLATVLGACADCFAL-NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
G V+A+++ AC ++ G QVH F K G L
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREGVQVHG---------------------FVAKSGLL 91
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
D + +A++ Y G + +R+VF+ D+ V W S++ GY G
Sbjct: 92 S------------DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 277 EEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVE-LVKQMHAHACKIGVTHDIVVA 335
E E + ++K MR GV + ++++ ++S+ C LL E L +Q+ K G+ + V
Sbjct: 140 EPEEVIDIYKGMRGEGVGCNENSMSLVISS-CGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
N++I++ + G ++ A +IFD MS + I
Sbjct: 199 -------------------------------NSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
SWNSI A+N E+ IF M +++ + ++++S + G + G
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
+ +G + + +L+ Y G VF M D +SWN+++ + +G +AL
Sbjct: 288 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 347
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNL-----FDTMKHNYNINPEIEHYS 570
L M SG + +TFT+ L+AC E+GR L + +N I +
Sbjct: 348 GLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG------N 401
Query: 571 CMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPE 630
+V +Y + G + E+ ++ +MP + D W N IG A ++ DP+
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMP-RRDVVAW-----------NALIGGYAEDE----DPD 445
Query: 631 NPGAYIQLSNVLATSEDW 648
A Q V S ++
Sbjct: 446 KALAAFQTMRVEGVSSNY 463
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
+Y+ GR++ A+ +FD M + +SWN+++ G+ + E ++ F +M L +K F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 432 FASVISACA-SKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
AS+++AC S S G QV G GL D +ST+++ Y G V RKVF+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
+ VSW ++++GY+ G E + +++ MR GV + + + V+S+C
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 324/669 (48%), Gaps = 105/669 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R L G+ LH ++K+ I+ SS +N + YS+ G L A F + N FS+
Sbjct: 22 RDLFTGKSLHALYVKS-IVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSY--- 77
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
N++V A+AK + +A LFD +P + + +N
Sbjct: 78 ----------------------------NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYN 109
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
T+I GY+ A+ LFK M E+ D L+ ++ AC D ++ KQ+H
Sbjct: 110 TLISGYADARETFAAMVLFKRMRKLGFEV---DGFTLSGLIAACCD--RVDLIKQLH--- 161
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
C S+ G DS + V +A V+ Y+ G +RE
Sbjct: 162 -------------CFSV------SGGFDSYSSVN-----------NAFVTYYSKGGLLRE 191
Query: 250 ARRVF---DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
A VF D D+ V WNS+I Y + E +ALAL+K M G D+ T+A++L+A
Sbjct: 192 AVSVFYGMDELRDE--VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
SL + +Q H K G + V S L+D YSK G
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG------------------- 290
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA-CPSEAIDIFCRMNMLDL 425
C + D++ +F + S L+ WN+++ G + N EA+ F +M +
Sbjct: 291 ---------CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH 341
Query: 426 KMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI-ISTSLVDFYCKCGFVEIGR 484
+ D SF V SAC++ S +Q+ G AI + + I ++ +L+ Y K G ++ R
Sbjct: 342 RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDAR 401
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
VFD M + + VS+N ++ GYA +G+G+EAL L++ M SG+ P+ ITF AVLSAC H G
Sbjct: 402 WVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCG 461
Query: 545 LVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSV 604
V+EG+ F+TMK + I PE EHYSCM+DL RAG L EA I+ MP++ + W ++
Sbjct: 462 KVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAAL 521
Query: 605 LRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQ 664
L C H N + + AA +++ + P Y+ L+N+ A + WE A VR+ M K ++
Sbjct: 522 LGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIR 581
Query: 665 KIPGCSWAD 673
K PGCSW +
Sbjct: 582 KKPGCSWIE 590
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 220/752 (29%), Positives = 344/752 (45%), Gaps = 152/752 (20%)
Query: 35 ANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAM----- 89
+N L+ YSR G + A ++F++MP+ N SW+T++ A H G ESL +F
Sbjct: 82 SNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRK 141
Query: 90 --P-----------------------------------EKTHYSWNMLVSAFAKSGDLQL 112
P ++ Y +L+ + K G++
Sbjct: 142 DSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDY 201
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A +FD++P K+ + W T+I G K G +L LF + D V D +L+TVL A
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN---VVPDGYILSTVLSA 258
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C+ L GKQ+HA ++ G LE D L + L+ Y KCG + +A ++ + +
Sbjct: 259 CSILPFLEGGKQIHAHILRYG--LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
S + L+SGY N EA+ LF M + G
Sbjct: 317 SWTTLLSGYKQ-------------------------------NALHKEAMELFTSMSKFG 345
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
+ D+ ++IL++ SL + Q+HA+ K + +D V ++L+D Y+K +A
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDAR 405
Query: 353 KFFGELKAYDTILLNTMITVYSNCG---RIEDAKWIFDTMSSK----TLISWNSIL---- 401
K F A D +L N MI YS G + +A IF M + +L+++ S+L
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Query: 402 ----VGLAKNA---------------------------CPSEAIDIFCRMNMLDL----- 425
+GL+K C ++ +F M + DL
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 426 --------------------------KMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
+ D+F+FA++++A + + ++LG++ + + G
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
LE + I+ +L+D Y KCG E K FD D V WN+++ YA +G G +AL +
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
+M G+ P+ ITF VLSAC H GLVE+G F+ M + I PE EHY CMV L RA
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRA 704
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G L +A +LIE+MP + A +W S+L GC GN + + AAE I DP++ G++ LS
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 640 NVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
N+ A+ W + +VRE M + V K PG SW
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVVKEPGRSW 796
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 226/542 (41%), Gaps = 113/542 (20%)
Query: 12 LREGRQLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
L G+Q+H L+ G+ +++SL N L+ Y + G + A +LF+ MP N SW TL+
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLM--NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 71 EAHLHSGHRNESLRLFHAMPE---------------------------KTH--------- 94
+ + E++ LF +M + + H
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 95 ---YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHP---RKALSLF 148
Y N L+ +AK L A +FD + +++N +I GYS+ G +AL++F
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+ M ++ ++L A A +L KQ+H + G+ L
Sbjct: 443 RDMR---FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL------------ 487
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
D F+ SAL+ Y+N ++++R VFD + V+WNS+
Sbjct: 488 ---------------------DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
+GYV E EAL LF ++ D T AN+++A +L V+L ++ H K G+
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDT 388
+ + +ALLD Y+K P +A K F + D + N++I+ Y+N G + A + +
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
M S+ G+ N +F V+SAC+ +E G
Sbjct: 647 MMSE----------GIEPNY---------------------ITFVGVLSACSHAGLVEDG 675
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYAT 507
+ F + G+E + +V + G + R++ + M K + W ++L G A
Sbjct: 676 LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 508 NG 509
G
Sbjct: 736 AG 737
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 43/365 (11%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
E+D + + L++ Y+ AG M AR+VF+ ++ V W++++S +G E+L +F
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 288 MRRHGVSGDVSTVANILSAGCSLLVVE---LVKQMHAHACKIGVTHDIVVASALLDAYSK 344
R + + CS L +V Q+ + K G D+ V + L+D Y K
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 345 SQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGL 404
G I+ A+ +FD + K+ ++W +++ G
Sbjct: 196 D-------------------------------GNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 405 AKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
K ++ +F ++ ++ D + ++V+SAC+ LE G+Q+ + GLE D
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 465 IISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS 524
+ L+D Y KCG V K+F+GM + +SW T+L GY N EA+ LF M
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 525 GVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYS----CMVDLYARAG 580
G++P +++L++C L G F T H Y I + + S ++D+YA+
Sbjct: 345 GLKPDMYACSSILTSC--ASLHALG---FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCD 399
Query: 581 CLGEA 585
CL +A
Sbjct: 400 CLTDA 404
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 9/251 (3%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM- 420
DT L N +I +YS G + A+ +F+ M + L+SW++++ + E++ +F
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 421 NMLDLKMDKFSFASVISACAS----KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCK 476
+++ +S I AC+ + Q F + G + D + T L+DFY K
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSF--LVKSGFDRDVYVGTLLIDFYLK 195
Query: 477 CGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
G ++ R VFD + + V+W T++ G G +L LF ++ V P + V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 537 LSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
LSAC +E G+ + + Y + + + ++D Y + G + A L MP
Sbjct: 256 LSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NK 313
Query: 597 DANMWFSVLRG 607
+ W ++L G
Sbjct: 314 NIISWTTLLSG 324
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 129/326 (39%), Gaps = 59/326 (18%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
+Q+H K G LN + + L+ YS CL D+ +FDEM + WN++ ++
Sbjct: 474 KQIHGLMFKYG-LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 76 SGHRNESLRLFHAMP---------------------------------------EKTHYS 96
E+L LF + E Y
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYI 592
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
N L+ +AK G + AH FDS ++ + WN++I Y+ G +KAL + + M + +
Sbjct: 593 TNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI 652
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
E + VL AC+ + G + ++ GIE E + +C +V G+ G L
Sbjct: 653 EPNYI---TFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC--MVSLLGRAGRL 707
Query: 217 DSAAR-VAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG---- 271
+ A + + + +L+SG A AG + A + A+L + SG
Sbjct: 708 NKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE-----HAAEMAILSDPKDSGSFTM 762
Query: 272 ----YVLNGEEMEALALFKRMRRHGV 293
Y G EA + +RM+ GV
Sbjct: 763 LSNIYASKGMWTEAKKVRERMKVEGV 788
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 9/216 (4%)
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI 491
FA ++ AS L V G+ I GLE D +S L++ Y + G + RKVF+ M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREM-RCSGVRPSAITFTAVLSACDHTGLVEEGR 550
+ + VSW+T++ +G E+L +F E R P+ ++ + AC +GL GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR 164
Query: 551 NLFDTMKH---NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
+ ++ + ++ + ++D Y + G + A + + +P ++ W +++ G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT-WTTMISG 223
Query: 608 CIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLA 643
C+ G + ++++ D P YI LS VL+
Sbjct: 224 CVKMGRSYVSLQLFYQLME-DNVVPDGYI-LSTVLS 257
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 212/775 (27%), Positives = 356/775 (45%), Gaps = 151/775 (19%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFD--EMPQTNAFSWNTL 69
LR+G+Q+H +FL ++ T R+L Y+ G D ++F ++ +++ WN++
Sbjct: 51 LRQGKQVH-AFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSI 109
Query: 70 IEAHLHSGHRNESLRLFHAM------PEKTHY------------------------SWNM 99
I + + +G N++L + M P+ + + S M
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169
Query: 100 ---------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
L+ A+ + G + + LFD + K+ ++WN +++GY+K G + F
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV 229
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M +D + +A VL CA ++ G Q+H V+V G+ +F+ + +SL+ Y
Sbjct: 230 MRMD---QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV--DFEGSIKNSLLSMY 284
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
KCG D A+++ ++ D + + ++SGY +G M
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME---------------------- 322
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
E+L F M GV D T +++L + +E KQ+H + + ++
Sbjct: 323 ---------ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA----KWIF 386
DI + SAL+DAY K +G A F + + D ++ MI+ Y + G D+ +W+
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 387 DTMSSKTLISWNSIL--VGLA------------------KNACP--SEAIDIFCRMNMLD 424
S I+ SIL +G+ N C ID++ + ++
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 425 L---------KMDKFSFASVISACAS------------------------------KSCL 445
L K D S+ S+I+ CA +C
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 446 ELGEQVFGKAITVGLEFDHIIS------TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWN 499
L + FGKAI G H ++ ++L+D Y KCG ++ VF M + + VSWN
Sbjct: 554 NLPSESFGKAIH-GFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 500 TILMGYATNGYGSEALTLFREM-RCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
+I+ +G ++L LF EM SG+RP ITF ++S+C H G V+EG F +M
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 559 NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGK 618
+Y I P+ EHY+C+VDL+ RAG L EA + ++ MPF DA +W ++L C H N + +
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 619 MAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+A+ K++ LDP N G Y+ +SN A + +WE +VR LM ++ VQKIPG SW +
Sbjct: 733 VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 191/414 (46%), Gaps = 65/414 (15%)
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
L+ +L AC++ L GKQVHA +IV I GD + R+ G
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSIS------------------GDSYTDERILG- 78
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
+ A+ +++ GKM + S + WNSIIS +V NG +ALA +
Sbjct: 79 --------MYAMCGSFSDCGKMFYRLDLRRSSIRP----WNSIISSFVRNGLLNQALAFY 126
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
+M GVS DVST ++ A +L + + + +G+ + VAS+L+ AY +
Sbjct: 127 FKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEY 186
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
K F + D ++ N M+ Y+ CG ++ S++ G
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD------------------SVIKG-- 226
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
F M M + + +F V+S CASK ++LG Q+ G + G++F+
Sbjct: 227 -----------FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 466 ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
I SL+ Y KCG + K+F M + D V+WN ++ GY +G E+LT F EM SG
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 526 VRPSAITFTAVLSACDHTGLVEEGRNLF-DTMKHNYNINPEIEHYSCMVDLYAR 578
V P AITF+++L + +E + + M+H +I+ +I S ++D Y +
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH--SISLDIFLTSALIDAYFK 387
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 194/702 (27%), Positives = 334/702 (47%), Gaps = 107/702 (15%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+L+E RQ+ K G+ +L+ + R G +D+A ++F+ + ++T++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQT-KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 71 EAHLHSGHRNESLRLF----------------------------------HAMPEKTHYS 96
+ +++L+ F H + K+ +S
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 97 WNM-----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
++ L + +AK + A +FD MP ++ + WNTI+ GYS+ G R AL + K+M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
+ L+ + +VL A + ++ GK++H + G FD ++ S
Sbjct: 228 CEENLKPSFI---TIVSVLPAVSALRLISVGKEIHGYAMRSG----FDSLVNIS------ 274
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
+ALV YA G + AR++FD +++ V WNS+I
Sbjct: 275 -----------------------TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
YV N EA+ +F++M GV +V L A L +E + +H + ++G+ +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
+ V ++L+ Y K + A FG+L++ + N MI ++ GR
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR------------- 418
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
P +A++ F +M +K D F++ SVI+A A S + +
Sbjct: 419 ------------------PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG 511
G + L+ + ++T+LVD Y KCG + I R +FD M + +WN ++ GY T+G+G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
AL LF EM+ ++P+ +TF +V+SAC H+GLVE G F MK NY+I ++HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 572 MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
MVDL RAG L EA D I +MP + N++ ++L C H N + AAE++ +L+P++
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
G ++ L+N+ + WE QVR M+ + ++K PGCS +
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 77/339 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R + G+++H +++G +S + + L+ Y++ G L+ A QLFD M + N SWN++
Sbjct: 250 RLISVGKEIHGYAMRSG-FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 70 IEAHLHSGHRNESLRLFHAM------P--------------------------------- 90
I+A++ + + E++ +F M P
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 91 EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
++ N L+S + K ++ A S+F + + + WN +I G+++ G P AL+ F
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M V D +V+ A A+ + K +H V+ L+ + + ++LV Y
Sbjct: 429 MR---SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC--LDKNVFVTTALVDMY 483
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
KC G + AR +FD ++ WN++I
Sbjct: 484 AKC-------------------------------GAIMIARLIFDMMSERHVTTWNAMID 512
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
GY +G AL LF+ M++ + + T +++SA CS
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA-CS 550
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
PS N + + + A ++ C+S L+ Q+ GL +H T
Sbjct: 18 PSRHRHFLSERNYIPANVYEHPAALLLERCSS---LKELRQILPLVFKNGLYQEHFFQTK 74
Query: 470 LVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS 529
LV +C+ G V+ +VF+ + V ++T+L G+A +AL F MR V P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 530 AITFTAVLSACDHTGLVEEGRNLFDTM-KHNYNINPEIEHYSCMVDLYARAGCLGEAIDL 588
FT +L C + G+ + + K +++ ++ + + ++YA+ + EA +
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL--DLFAMTGLENMYAKCRQVNEARKV 192
Query: 589 IEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN-PGAYIQLSNVL 642
+ MP + D W +++ G +G + +MA E + + EN ++I + +VL
Sbjct: 193 FDRMP-ERDLVSWNTIVAGYSQNG---MARMALEMVKSMCEENLKPSFITIVSVL 243
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 217/745 (29%), Positives = 334/745 (44%), Gaps = 122/745 (16%)
Query: 10 RTLREGRQLHVSFLKTGIL---NSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
R L G+Q+H LK G N + T +L+ FY++ L+ A LF ++ N FSW
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIET--KLVIFYAKCDALEIAEVLFSKLRVRNVFSW 141
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVS------------------------ 102
+I G +L F M E + N +V
Sbjct: 142 AAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK 201
Query: 103 ---------------AFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
+ K G L A +FD +P +N + WN ++ GY + G +A+ L
Sbjct: 202 SGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRL 261
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F M +E ++T L A A+ + GKQ HA IV G+EL D +L +SL+
Sbjct: 262 FSDMRKQGVEPTRV---TVSTCLSASANMGGVEEGKQSHAIAIVNGMEL--DNILGTSLL 316
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
FY K G ++ A VFD ++ V WN
Sbjct: 317 NFYCKVGLIEY-------------------------------AEMVFDRMFEKDVVTWNL 345
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
IISGYV G +A+ + + MR + D T+A ++SA ++L K++ + +
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCG---------- 377
DIV+AS ++D Y+K +A K F D IL NT++ Y+ G
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 378 -------------------------RIEDAKWIFDTMSS----KTLISWNSILVGLAKNA 408
++++AK +F M S LISW +++ G+ +N
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIS- 467
C EAI +M L+ + FS +SACA + L +G + G I L+ ++S
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR-NLQHSSLVSI 584
Query: 468 -TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGV 526
TSLVD Y KCG + KVF + ++ N ++ YA G EA+ L+R + G+
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGL 644
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
+P IT T VLSAC+H G + + +F + ++ P +EHY MVDL A AG +A+
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704
Query: 587 DLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE 646
LIEEMPF+ DA M S++ C + + K+++ +PEN G Y+ +SN A
Sbjct: 705 RLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764
Query: 647 DWEGSAQVRELMIDKNVQKIPGCSW 671
W+ ++RE+M K ++K PGCSW
Sbjct: 765 SWDEVVKMREMMKAKGLKKKPGCSW 789
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 212/470 (45%), Gaps = 69/470 (14%)
Query: 137 KRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIEL 196
K G ++ALSL M L + + +L C L+ GKQ+HAR++ G
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRI---GPEIYGEILQGCVYERDLSTGKQIHARILKNGDFY 103
Query: 197 EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS 256
++ + + LV FY KC L+ A + FS K+R R VF
Sbjct: 104 ARNEYIETKLVIFYAKCDALEIAEVL---------FS------------KLR-VRNVFS- 140
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV 316
W +II G AL F M + + D V N+ A +L
Sbjct: 141 --------WAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
+ +H + K G+ + VAS+L D Y K C
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGK-------------------------------C 221
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
G ++DA +FD + + ++WN+++VG +N EAI +F M ++ + + ++ +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
SA A+ +E G+Q AI G+E D+I+ TSL++FYCK G +E VFD M + D V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF-DT 555
+WN I+ GY G +A+ + + MR ++ +T ++SA T ++ G+ +
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 556 MKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVL 605
++H++ +I S ++D+YA+ G + +A + + + D +W ++L
Sbjct: 402 IRHSF--ESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLL 448
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 12/215 (5%)
Query: 404 LAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEF- 462
L KN EA+ + M+ +L++ + ++ C + L G+Q+ + + G +
Sbjct: 45 LCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYA 104
Query: 463 -DHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM 521
+ I T LV FY KC +EI +F + + SW I+ G AL F EM
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 522 RCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH----YSCMVDLYA 577
+ + P V AC GR + H Y + +E S + D+Y
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGV-----HGYVVKSGLEDCVFVASSLADMYG 219
Query: 578 RAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ G L +A + +E+P +A W +++ G + +G
Sbjct: 220 KCGVLDDASKVFDEIP-DRNAVAWNALMVGYVQNG 253
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 201/703 (28%), Positives = 323/703 (45%), Gaps = 110/703 (15%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G +H +KTG++ + N L+ FY G + DA QLFD MP+ N SWN++I
Sbjct: 206 GLAVHGLVVKTGLV-EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 75 HSGHRNESLRLFHAMPE------------------------------KTHYSW------- 97
+G ES L M E K + W
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 98 ------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
N L+ ++K G + A +F KN + WNT++ G+S G + + M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
L E V D T+L A CF H + EL C SL + +
Sbjct: 385 -LAGGEDVKADE---VTILNAVPVCF--------HESFLPSLKELH-----CYSLKQEF- 426
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
++ +A V+ YA G + A+RVF + WN++I G
Sbjct: 427 ----------------VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
+ + + +L +M+ G+ D TV ++LSA L + L K++H + + D
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
+ V ++L ++Y +CG + + +FD M
Sbjct: 531 LFVYLSVL-------------------------------SLYIHCGELCTVQALFDAMED 559
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
K+L+SWN+++ G +N P A+ +F +M + +++ S V AC+ L LG +
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA 619
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG 511
A+ LE D I+ SL+D Y K G + KVF+G+ + SWN ++MGY +G
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
EA+ LF EM+ +G P +TF VL+AC+H+GL+ EG D MK ++ + P ++HY+C
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 572 MVDLYARAGCLGEAIDLI-EEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPE 630
++D+ RAG L +A+ ++ EEM +AD +W S+L C H N +G+ A K+ +L+PE
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE 799
Query: 631 NPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
P Y+ LSN+ A WE +VR+ M + +++K GCSW +
Sbjct: 800 KPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 842
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 154/657 (23%), Positives = 277/657 (42%), Gaps = 117/657 (17%)
Query: 3 MELQGIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
++ G + + GR++H + L + R++ Y+ G DD+ +FD + N
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPEKT-----HYSW-------------------- 97
F WN +I ++ + +E L F M T H+++
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 98 ---------------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
N LVS + G + A LFD MP +N + WN++I +S G
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 143 KALSLFKTMSLDPLE-MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
++ L M + + D L TVL CA + GK VH + + L+ + V
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV--KLRLDKELV 328
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC 261
L ++L+ Y KCG + + A+ +F ++
Sbjct: 329 LNNALMDMYSKCGCITN-------------------------------AQMIFKMNNNKN 357
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHG--VSGDVSTVANILSAGCSLLVVELVKQM 319
V WN+++ G+ G+ + ++M G V D T+ N + + +K++
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 320 HAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRI 379
H ++ K ++ +VA+A + +Y+K CG +
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAK-------------------------------CGSL 446
Query: 380 EDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISAC 439
A+ +F + SKT+ SWN+++ G A++ P ++D +M + L D F+ S++SAC
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 440 ASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWN 499
+ L LG++V G I LE D + S++ Y CG + + +FD M VSWN
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWN 566
Query: 500 TILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHN 559
T++ GY NG+ AL +FR+M G++ I+ V AC + GR H
Sbjct: 567 TVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHA 621
Query: 560 YNINPEIE---HYSC-MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
Y + +E +C ++D+YA+ G + ++ + + ++ A+ W +++ G HG
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 15/261 (5%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM- 420
D +L +IT+Y+ CG +D++++FD + SK L WN+++ ++N E ++ F M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
+ DL D F++ VI ACA S + +G V G + GL D + +LV FY GFV
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS----GVRPSAITFTAV 536
++FD M + + VSWN+++ ++ NG+ E+ L EM P T V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 537 LSACDHTGLVEEGRNLFDTMKHNY----NINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
L C + G+ + H + ++ E+ + ++D+Y++ GC+ A +I +M
Sbjct: 299 LPVCAREREIGLGKGV-----HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKM 352
Query: 593 PFQADANMWFSVLRGCIAHGN 613
+ W +++ G A G+
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGD 373
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 165/396 (41%), Gaps = 52/396 (13%)
Query: 206 LVKFYGKCGDLDSAARVAGVVK-----EVDDFSLSALVSGYANAGKMREARRVFDSRVDQ 260
L++ GK D++ ++ +V DD + +++ YA G ++R VFD+ +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRM-RRHGVSGDVSTVANILSAGCSLLVVELVKQM 319
WN++IS Y N E L F M + D T ++ A + V + +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 320 HAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRI 379
H K G+ D+ V +AL+ Y G H G +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFY----GTH---------------------------GFV 238
Query: 380 EDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD----LKMDKFSFASV 435
DA +FD M + L+SWNS++ + N E+ + M + D + +V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
+ CA + + LG+ V G A+ + L+ + +++ +L+D Y KCG + + +F +
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSG--VRPSAITFTAVLSACDHTGLVEEGRNLF 553
VSWNT++ G++ G + R+M G V+ +T + C H + + L
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL- 417
Query: 554 DTMKHNYNINPEIEH----YSCMVDLYARAGCLGEA 585
H Y++ E + + V YA+ G L A
Sbjct: 418 ----HCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 146/338 (43%), Gaps = 45/338 (13%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+LR GR+ H LK +L A L+ Y++ G + ++++F+ + + + SWN +I
Sbjct: 612 SLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 71 EAHLHSGHRNESLRLFHAMPEKTHYSWNM----LVSAFAKSGDLQLAHSLFDSMPCKNGL 126
+ G E+++LF M H ++ +++A SG + D M GL
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 127 VWNT-----IIHGYSKRGHPRKALSLF-KTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
N +I + G KAL + + MS + D G+ ++L +C L
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE------ADVGIWKSLLSSCRIHQNLE 784
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSG 240
G++V A++ E + VL S+L GK D V V + +++ SL
Sbjct: 785 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWED------VRKVRQRMNEMSLRK---- 834
Query: 241 YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEAL--ALFKRMRRHGVSGDVS 298
A + R+VF V+ + G+ EE+++L L ++ + G D
Sbjct: 835 DAGCSWIELNRKVFS------FVVGERFLDGF----EEIKSLWSILEMKISKMGYRPDTM 884
Query: 299 TVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVAS 336
+V + LS E ++Q+ H+ K+ +T+ ++ S
Sbjct: 885 SVQHDLSEE------EKIEQLRGHSEKLALTYGLIKTS 916
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 435 VISACASKSCLELGEQVFG-KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT 493
++ A + +E+G ++ + + L D ++ T ++ Y CG + R VFD +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 494 DEVSWNTILMGYATNGYGSEALTLFREM-RCSGVRPSAITFTAVLSACDHTGLVEEGRNL 552
+ WN ++ Y+ N E L F EM + + P T+ V+ AC G+ + G L
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVGIGL 207
Query: 553 -FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLR 606
+ + ++ + +V Y G + +A+ L + MP + + W S++R
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIR 261
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 208/709 (29%), Positives = 333/709 (46%), Gaps = 88/709 (12%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQF---YSRRGCLDDATQLFDEMPQTNA-FS 65
+T+ E + H S K G L++ ++T +L+ R L A ++F+ F
Sbjct: 43 KTIDELKMFHRSLTKQG-LDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 66 WNTLIEAHLHSGHRNESLRLFHAM------PEKTHYSW---------------------- 97
+N+LI + SG NE++ LF M P+K + +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 98 -----------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALS 146
N LV +A+ G+L A +FD M +N + W ++I GY++R + A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 147 LFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
LF M D E V ++ + V+ ACA L G++V+A + GIE
Sbjct: 222 LFFRMVRD--EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE----------- 268
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCA 262
V+D +SALV Y + A+R+FD S +D C
Sbjct: 269 ----------------------VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC- 305
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
N++ S YV G EAL +F M GV D ++ + +S+ L + K H +
Sbjct: 306 ---NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
+ G + +AL+D Y K A + F + + N+++ Y G ++ A
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD-LKMDKFSFASVISACAS 441
F+TM K ++SWN+I+ GL + + EAI++FC M + + D + S+ SAC
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTI 501
L+L + ++ G++ D + T+LVD + +CG E +F+ + D +W
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
+ A G A+ LF +M G++P + F L+AC H GLV++G+ +F +M +
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAA 621
++PE HY CMVDL RAG L EA+ LIE+MP + + +W S+L C GN + AA
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAA 662
Query: 622 EKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
EKI L PE G+Y+ LSNV A++ W A+VR M +K ++K PG S
Sbjct: 663 EKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 291/569 (51%), Gaps = 35/569 (6%)
Query: 103 AFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCD 162
A ++S L + + + N WN I G+S+ +P+++ L+K M D
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 163 AGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV 222
+ CAD + G + V+ + LE + ++ + + CGD
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVL--KLRLELVSHVHNASIHMFASCGD------- 206
Query: 223 AGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEAL 282
M AR+VFD + V WN +I+GY GE +A+
Sbjct: 207 ------------------------MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 283 ALFKRMRRHGVSGDVSTVANILSAGCSLL-VVELVKQMHAHACKIGVTHDIVVASALLDA 341
++K M GV D T+ ++S+ CS+L + K+ + + + G+ I + +AL+D
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSS-CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 342 YSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSIL 401
+SK HEA + F L+ + TMI+ Y+ CG ++ ++ +FD M K ++ WN+++
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 402 VGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLE 461
G + +A+ +F M + K D+ + +SAC+ L++G + L
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLS 421
Query: 462 FDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM 521
+ + TSLVD Y KCG + VF G+ + +++ I+ G A +G S A++ F EM
Sbjct: 422 LNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM 481
Query: 522 RCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGC 581
+G+ P ITF +LSAC H G+++ GR+ F MK +N+NP+++HYS MVDL RAG
Sbjct: 482 IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 582 LGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNV 641
L EA L+E MP +ADA +W ++L GC HGN +G+ AA+K+++LDP + G Y+ L +
Sbjct: 542 LEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGM 601
Query: 642 LATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+ WE + + R +M ++ V+KIPGCS
Sbjct: 602 YGEANMWEDAKRARRMMNERGVEKIPGCS 630
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 124/542 (22%), Positives = 234/542 (43%), Gaps = 87/542 (16%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQF--YSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
+Q+ + G++ ++ RL+ F S LD + ++ + N FSWN I
Sbjct: 70 KQIQAQMIINGLILDPFASS-RLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128
Query: 74 LHSGHRNESLRLFHAM-------PEKTHYSWNML-------------------------- 100
S + ES L+ M H+++ +L
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188
Query: 101 ---------VSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
+ FA GD++ A +FD P ++ + WN +I+GY K G KA+ ++K M
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
E V D + ++ +C+ LN GK+ + V G+ + L ++L+ +
Sbjct: 249 ES---EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP--LVNALMDMFS 303
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
KCGD+ A R+ +++ S + ++SGYA G + +R++FD ++ VLWN++I G
Sbjct: 304 KCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
V +ALALF+ M+ D T+ + LSA L +++ +H + K ++ +
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN 423
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
+ + ++L+D Y+K CG I +A +F + +
Sbjct: 424 VALGTSLVDMYAK-------------------------------CGNISEALSVFHGIQT 452
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
+ +++ +I+ GLA + S AI F M + D+ +F ++SAC ++ G
Sbjct: 453 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 512
Query: 452 FGKA---ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYAT 507
F + + + H + +VD + G +E ++ + M ++ D W +L G
Sbjct: 513 FSQMKSRFNLNPQLKHY--SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570
Query: 508 NG 509
+G
Sbjct: 571 HG 572
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 117/297 (39%), Gaps = 68/297 (22%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L G++ + ++K L ++ N L+ +S+ G + +A ++FD + + SW T+I
Sbjct: 273 LNRGKEFY-EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMIS 331
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
+ G + S +LF M EK WN ++ ++ Q A +LF M N
Sbjct: 332 GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN------- 384
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIV 191
D + M+HC L AC+ AL+ G +H +
Sbjct: 385 -------------------TKPDEITMIHC--------LSACSQLGALDVGIWIHR--YI 415
Query: 192 EGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREAR 251
E L + L +SLV Y KCG++ EA
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNIS-------------------------------EAL 444
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
VF + ++ + +II G L+G+ A++ F M G++ D T +LSA C
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/591 (30%), Positives = 302/591 (51%), Gaps = 51/591 (8%)
Query: 93 THYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
+H S ++++S + L A LF ++ L W ++I ++ + KAL+ F M
Sbjct: 38 SHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMR 97
Query: 153 LDPLEMVHC-DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
C D V +VL +C L G+ VH ++ G++ D ++L+ Y
Sbjct: 98 ASG----RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC--DLYTGNALMNMYA 151
Query: 212 KCGDLDSAARVAGVVKEV---------DDFSLSALVSGYANAGKMREARRVFDSRVDQCA 262
K + S V V E+ +D + + + RRVF+ +
Sbjct: 152 KLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMPRKDV 207
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
V +N+II+GY +G +AL + + M + D T++++L + V K++H +
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
+ G+ D+ + S+L+D Y+KS RIED+
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKS-------------------------------ARIEDS 296
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
+ +F + + ISWNS++ G +N +EA+ +F +M +K +F+SVI ACA
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL 502
+ L LG+Q+ G + G + I+++LVD Y KCG ++ RK+FD M DEVSW I+
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
MG+A +G+G EA++LF EM+ GV+P+ + F AVL+AC H GLV+E F++M Y +
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAE 622
N E+EHY+ + DL RAG L EA + I +M + ++W ++L C H N + + AE
Sbjct: 477 NQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Query: 623 KIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
KI +D EN GAY+ + N+ A++ W+ A++R M K ++K P CSW +
Sbjct: 537 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 205/498 (41%), Gaps = 106/498 (21%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSR---RGCLDDATQLFDEMPQTNAFSWNT 68
LR G +H ++ G ++ L T N L+ Y++ G +FDEMPQ + S +
Sbjct: 121 LRFGESVHGFIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 69 LIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVW 128
++A + F + +F+ MP K+ + +
Sbjct: 180 DVKA-------------------------ETCIMPFG----IDSVRRVFEVMPRKDVVSY 210
Query: 129 NTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHAR 188
NTII GY++ G AL + + M L+ D+ L++VL ++ + GK++H
Sbjct: 211 NTIIAGYAQSGMYEDALRMVREMGTTDLK---PDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 189 VIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMR 248
VI +GI+ D + SSLV Y K ++ + RV + D S ++LV+GY G+
Sbjct: 268 VIRKGIDS--DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 325
Query: 249 EARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
EA R LF++M V ++++ A
Sbjct: 326 EALR-------------------------------LFRQMVTAKVKPGAVAFSSVIPACA 354
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT 368
L + L KQ+H + + G +I +ASAL+D YSK
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK------------------------ 390
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
CG I+ A+ IFD M+ +SW +I++G A + EA+ +F M +K +
Sbjct: 391 -------CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 429 KFSFASVISACASKSCLELGEQVFG---KAITVGLEFDHIISTSLVDFYCKCGFVEIGRK 485
+ +F +V++AC+ ++ F K + E +H ++ D + G +E
Sbjct: 444 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY--AAVADLLGRAGKLEEAYN 501
Query: 486 VFDGM-IKTDEVSWNTIL 502
M ++ W+T+L
Sbjct: 502 FISKMCVEPTGSVWSTLL 519
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 125/297 (42%), Gaps = 76/297 (25%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
+G+++H ++ GI +S + + L+ Y++ ++D+ ++F + + SWN+L+ +
Sbjct: 260 KGKEIHGYVIRKGI-DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 74 LHSGHRNESLRLFHAM----------------PEKTH----------------------- 94
+ +G NE+LRLF M P H
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
+ + LV ++K G+++ A +FD M + + W II G++ GH +A+SLF+ M
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK-- 436
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
+ V + VL AC+ H ++ E G
Sbjct: 437 -RQGVKPNQVAFVAVLTACS-----------HVGLVDEA-------------------WG 465
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSR-VDQCAVLWNSIIS 270
+S +V G+ +E++ ++ A + G AGK+ EA V+ +W++++S
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLG--RAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 208/709 (29%), Positives = 333/709 (46%), Gaps = 88/709 (12%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQF---YSRRGCLDDATQLFDEMPQTNA-FS 65
+T+ E + H S K G L++ ++T +L+ R L A ++F+ F
Sbjct: 43 KTIDELKMFHRSLTKQG-LDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 66 WNTLIEAHLHSGHRNESLRLFHAM------PEKTHYSW---------------------- 97
+N+LI + SG NE++ LF M P+K + +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 98 -----------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALS 146
N LV +A+ G+L A +FD M +N + W ++I GY++R + A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 147 LFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
LF M D E V ++ + V+ ACA L G++V+A + GIE
Sbjct: 222 LFFRMVRD--EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE----------- 268
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCA 262
V+D +SALV Y + A+R+FD S +D C
Sbjct: 269 ----------------------VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC- 305
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
N++ S YV G EAL +F M GV D ++ + +S+ L + K H +
Sbjct: 306 ---NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
+ G + +AL+D Y K A + F + + N+++ Y G ++ A
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD-LKMDKFSFASVISACAS 441
F+TM K ++SWN+I+ GL + + EAI++FC M + + D + S+ SAC
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTI 501
L+L + ++ G++ D + T+LVD + +CG E +F+ + D +W
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
+ A G A+ LF +M G++P + F L+AC H GLV++G+ +F +M +
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAA 621
++PE HY CMVDL RAG L EA+ LIE+MP + + +W S+L C GN + AA
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAA 662
Query: 622 EKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
EKI L PE G+Y+ LSNV A++ W A+VR M +K ++K PG S
Sbjct: 663 EKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 204/706 (28%), Positives = 321/706 (45%), Gaps = 108/706 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R L GR +H ++TG ++ + AN L+ FY++ G L A +F+ + + SWN+L
Sbjct: 28 RNLVAGRAVHGQIIRTGA-STCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 70 IEAHLHSGHRNES---LRLF----------------------------------HAMPEK 92
I + +G + S ++LF HA+ K
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 93 TH-----YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
Y LV + K+G ++ +F MP +N W+T++ GY+ RG +A+ +
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F + E D V VL + A + G+Q+H I G+ L F L ++LV
Sbjct: 207 FNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGF-VALSNALV 263
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
Y KC L+ EA ++FDS D+ ++ W++
Sbjct: 264 TMYSKCESLN-------------------------------EACKMFDSSGDRNSITWSA 292
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
+++GY NGE +EA+ LF RM G+ T+ +L+A + +E KQ+H+ K+G
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFD 387
+ +AL+D Y+K+ G + DA+ FD
Sbjct: 353 FERHLFATTALVDMYAKA-------------------------------GCLADARKGFD 381
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
+ + + W S++ G +N+ EA+ ++ RM + + + ASV+ AC+S + LEL
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 448 GEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYAT 507
G+QV G I G + I ++L Y KCG +E G VF D VSWN ++ G +
Sbjct: 442 GKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSH 501
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE 567
NG G EAL LF EM G+ P +TF ++SAC H G VE G F+ M ++P+++
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVD 561
Query: 568 HYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQL 627
HY+CMVDL +RAG L EA + IE +W +L C HG +G A EK++ L
Sbjct: 562 HYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 621
Query: 628 DPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
Y+QLS + +V + M V K GCSW +
Sbjct: 622 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 194/687 (28%), Positives = 338/687 (49%), Gaps = 81/687 (11%)
Query: 21 SFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRN 80
+FL+T ++++ N + ++R G L +A +F +M + SW +I A+ +G +
Sbjct: 39 NFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMS 98
Query: 81 ESLRLFHAMPEKTHYSWNMLVSAFAKSG-DLQLAHSLFDSMPCKNGLVWNTIIHGYSKRG 139
++ ++F MP + S+N +++A K+ DL A+ LF +P KN + + T+I G+ + G
Sbjct: 99 KAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAG 158
Query: 140 HPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEF- 198
D E ++ + V +F
Sbjct: 159 R------------FDEAEFLYAETPV-------------------------------KFR 175
Query: 199 DKVLCSSLVKFYGKCGDLDSAARV--AGVVKEVDDFSLSALVSGYANAGKMREARRVFDS 256
D V + L+ Y + G + A RV VKEV S S++V GY G++ +AR +FD
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV--VSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTVANILSAGCSLLVVEL 315
++ + W ++I GY G + LF RMR+ G V + +T+A + A +
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
Q+H ++ + D+ + ++L+ YSK EA FG +K D++ N++IT
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM--------------- 420
+I +A +F+ M K ++SW ++ G + S+ +++F M
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 421 --------------NMLDLKM--DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
ML ++ + ++F+SV+SA AS + L G Q+ G+ + + + D
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 465 IISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS 524
+ SLV YCKCG K+F + + + VS+NT++ GY+ NG+G +AL LF + S
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESS 533
Query: 525 GVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
G P+ +TF A+LSAC H G V+ G F +MK +YNI P +HY+CMVDL R+G L +
Sbjct: 534 GKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDD 593
Query: 585 AIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLAT 644
A +LI MP + + +W S+L H + ++AA+K+I+L+P++ Y+ LS + +
Sbjct: 594 ASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSI 653
Query: 645 SEDWEGSAQVRELMIDKNVQKIPGCSW 671
++ + K ++K PG SW
Sbjct: 654 IGKNRDCDRIMNIKKSKRIKKDPGSSW 680
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 197/478 (41%), Gaps = 96/478 (20%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWN 67
I + R G + + N S+ + ++ Y+ G + A Q+FDEMP S+N
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYN 116
Query: 68 TLIEAHLHSG-HRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK--- 123
+I A + + ++ LF +PEK S+ +++ F ++G A L+ P K
Sbjct: 117 AMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRD 176
Query: 124 ----NGLV--------WN------------------TIIHGYSKRGHPRKALSLFKTMS- 152
N L+ WN +++HGY K G A SLF M+
Sbjct: 177 SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 153 ---------LDP--------------LEM-----VHCDAGVLATVLGACADCFALNCGKQ 184
+D L M V ++ LA + AC D G Q
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 185 VHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANA 244
+H +V + LEFD L +SL+ Y K G + A V GV+K D S ++L++G
Sbjct: 297 IHG--LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQR 354
Query: 245 GKMREARRVFDS--------------------RVDQCA-----------VLWNSIISGYV 273
++ EA +F+ + +C + W ++IS +V
Sbjct: 355 KQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
NG EAL F +M + V + T +++LSA SL + Q+H K+ + +D+
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLS 474
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
V ++L+ Y K ++A K F + + + NTMI+ YS G + A +F + S
Sbjct: 475 VQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 186/608 (30%), Positives = 301/608 (49%), Gaps = 72/608 (11%)
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
N++++ ++ +G E+ F + + SWN L+S + K+G + A +LF MP N +
Sbjct: 146 NSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
WN +I G+ +G PR AL M + L + D L L AC+ L GKQ+H
Sbjct: 206 SWNCLISGFVDKGSPR-ALEFLVRMQREGLVL---DGFALPCGLKACSFGGLLTMGKQLH 261
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
V+ G+E F++SAL+ Y+N G
Sbjct: 262 CCVVKSGLE---------------------------------SSPFAISALIDMYSNCGS 288
Query: 247 MREARRVFDSR---VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANI 303
+ A VF V+ +WNS++SG+++N E AL L ++ + + D T++
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 304 LSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT 363
L + + + L Q+H+ G D +V S L+D
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVD----------------------- 385
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
+++N G I+DA +F + +K +I+++ ++ G K+ S A +F + L
Sbjct: 386 --------LHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
L D+F ++++ C+S + L G+Q+ G I G E + + +T+LVD Y KCG ++ G
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
+FDGM++ D VSW I++G+ NG EA F +M G+ P+ +TF +LSAC H+
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS 557
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFS 603
GL+EE R+ +TMK Y + P +EHY C+VDL +AG EA +LI +MP + D +W S
Sbjct: 558 GLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTS 617
Query: 604 VLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNV 663
+L C H N + + AEK+++ P++P Y LSN AT W+ ++VRE K
Sbjct: 618 LLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE-AAKKLG 676
Query: 664 QKIPGCSW 671
K G SW
Sbjct: 677 AKESGMSW 684
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 222/514 (43%), Gaps = 43/514 (8%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N ++S + L AH +FD M +N + W T++ GY+ G P KA+ L++ M LD E
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM-LDSEE 102
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
+ + + VL AC + G V+ R+ E L D VL +S+V Y K G L
Sbjct: 103 EA-ANEFMYSAVLKACGLVGDIQLGILVYERIGKE--NLRGDVVLMNSVVDMYVKNGRLI 159
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
A + S + L+SGY AG M EA +F V WN +ISG+V G
Sbjct: 160 EANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS 219
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASA 337
AL RM+R G+ D + L A ++ + KQ+H K G+ SA
Sbjct: 220 P-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISA 278
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS---SKTL 394
L+D +YSNCG + A +F + ++
Sbjct: 279 LID-------------------------------MYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
WNS+L G N A+ + ++ DL D ++ + + C + L LG QV
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
+ G E D+I+ + LVD + G ++ K+F + D ++++ ++ G +G+ S A
Sbjct: 368 VVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLA 427
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT-MKHNYNINPEIEHYSCMV 573
LFRE+ G+ + +L C + G+ + +K Y P + +V
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TALV 485
Query: 574 DLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
D+Y + G + + L + M + D W ++ G
Sbjct: 486 DMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVG 518
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 185/401 (46%), Gaps = 9/401 (2%)
Query: 232 FSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH 291
F + ++S Y + + +A +VFD ++ V W +++SGY +G+ +A+ L++RM
Sbjct: 41 FIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDS 100
Query: 292 GVSGDVSTVANILSAGCSLLV-VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
+ + + C L+ ++L ++ K + D+V+ ++++D Y K+ E
Sbjct: 101 EEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIE 160
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
A F E+ + NT+I+ Y G +++A +F M ++SWN ++ G P
Sbjct: 161 ANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP 220
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
A++ RM L +D F+ + AC+ L +G+Q+ + GLE ++L
Sbjct: 221 -RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISAL 279
Query: 471 VDFYCKCGFVEIGRKVFDG---MIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVR 527
+D Y CG + VF + + WN++L G+ N AL L ++ S +
Sbjct: 280 IDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC 339
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
+ T + L C + + G + + Y ++ + S +VDL+A G + +A
Sbjct: 340 FDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQDAH 397
Query: 587 DLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQL 627
L +P D + ++RGC+ G ++ ++I+L
Sbjct: 398 KLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM- 420
+ + N +I++Y + + DA +FD MS + +++W +++ G + P++AI+++ RM
Sbjct: 39 NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRML 98
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
+ + ++F +++V+ AC ++LG V+ + L D ++ S+VD Y K G +
Sbjct: 99 DSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRL 158
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGV-------------- 526
F +++ SWNT++ GY G EA+TLF M V
Sbjct: 159 IEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG 218
Query: 527 RPSAITFTAV----------------LSACDHTGLVEEGRNLF-DTMKHNYNINPEIEHY 569
P A+ F L AC GL+ G+ L +K +P
Sbjct: 219 SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSP--FAI 276
Query: 570 SCMVDLYARAGCLGEAIDLI--EEMPFQADANMWFSVLRG 607
S ++D+Y+ G L A D+ E++ + +W S+L G
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
++DLK+ A+ + C + GE + I G+ + I+ +++ Y +
Sbjct: 2 VMDLKL----IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLS 57
Query: 482 IGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS-AITFTAVLSAC 540
KVFD M + + V+W T++ GY ++G ++A+ L+R M S + ++AVL AC
Sbjct: 58 DAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKAC 117
Query: 541 DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM 600
G ++ G +++ + N+ ++ + +VD+Y + G L EA +E+ + +
Sbjct: 118 GLVGDIQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTS 175
Query: 601 WFSVLRG 607
W +++ G
Sbjct: 176 WNTLISG 182
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 295 bits (755), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 201/699 (28%), Positives = 334/699 (47%), Gaps = 89/699 (12%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G Q+H ++ G ++ + A+ LL Y++ ++ ++F +P+ N+ SW+ +I +
Sbjct: 199 GMQIHGIVVRVGC-DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 75 HSGHRNESLRLF----------------------------------HAMPEKTHYSWNML 100
+ + +L+ F HA K+ ++ + +
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 317
Query: 101 VSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
V +AK ++Q A LFD+ N +N +I GYS+ H KAL LF +
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
L D L+ V ACA L+ G Q++ I + L D + ++ + YGKC
Sbjct: 378 LGF---DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL--DVCVANAAIDMYGKCQA 432
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
L EA RVFD + AV WN+II+ + N
Sbjct: 433 L-------------------------------AEAFRVFDEMRRRDAVSWNAIIAAHEQN 461
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVA 335
G+ E L LF M R + D T +IL A C+ + ++H+ K G+ + V
Sbjct: 462 GKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
+L+D YSK EA K + G +E+ + + + + +
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANV-----------SGTMEELEKMHNKRLQEMCV 569
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
SWNSI+ G +A +F RM + + DKF++A+V+ CA+ + LG+Q+ +
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
I L+ D I ++LVD Y KCG + R +F+ ++ D V+WN ++ GYA +G G EA+
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 689
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDL 575
LF M ++P+ +TF ++L AC H GL+++G F MK +Y ++P++ HYS MVD+
Sbjct: 690 QLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDI 749
Query: 576 YARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRT-IGKMAAEKIIQLDPENPGA 634
++G + A++LI EMPF+AD +W ++L C H N + + A +++LDP++ A
Sbjct: 750 LGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA 809
Query: 635 YIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
Y LSNV A + WE + +R M ++K PGCSW +
Sbjct: 810 YTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 848
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/579 (26%), Positives = 258/579 (44%), Gaps = 97/579 (16%)
Query: 25 TGILN--SSLTTANRLLQFY--SRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHS 76
T LN +S++T N F +++G L+ Q M + F N L++ + +S
Sbjct: 37 TDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS 96
Query: 77 GHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYS 136
+ +F MP + SWN +++ ++KS D+ A+S F+ MP ++ + WN+++ GY
Sbjct: 97 RDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYL 156
Query: 137 KRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIEL 196
+ G K++ +F M + +E D A +L C+ + G Q+H V+
Sbjct: 157 QNGESLKSIEVFVDMGREGIEF---DGRTFAIILKVCSFLEDTSLGMQIHGIVV------ 207
Query: 197 EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS 256
+V C + D + SAL+ YA + E+ RVF
Sbjct: 208 ---RVGC------------------------DTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV 316
++ +V W++II+G V N AL FK M++ S A++L + +L + L
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
Q+HAHA K D +V +A LD Y+K C
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAK-------------------------------C 329
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
++DA+ +FD + S+N+++ G ++ +A+ +F R+ L D+ S + V
Sbjct: 330 DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVF 389
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
ACA L G Q++G AI L D ++ + +D Y KC + +VFD M + D V
Sbjct: 390 RACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 449
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD----------HTGLV 546
SWN I+ + NG G E L LF M S + P TF ++L AC H+ +V
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIV 509
Query: 547 EEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
+ G M N ++ ++D+Y++ G + EA
Sbjct: 510 KSG------MASNSSVG------CSLIDMYSKCGMIEEA 536
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 169/382 (44%), Gaps = 75/382 (19%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
+ L EG Q++ +K+ L+ + AN + Y + L +A ++FDEM + +A SWN +
Sbjct: 396 KGLSEGLQIYGLAIKSS-LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 70 IEAHLHSGHRNESLRLFHAM------PEKTHY------------SWNM------------ 99
I AH +G E+L LF +M P++ + + M
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMA 514
Query: 100 --------LVSAFAKSGDLQLA---HSLFDSMPCKNGLV-----------------WNTI 131
L+ ++K G ++ A HS F +G + WN+I
Sbjct: 515 SNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSI 574
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEM-VHCDAGVLATVLGACADCFALNCGKQVHARVI 190
I GY + A LF M +EM + D ATVL CA+ + GKQ+HA+VI
Sbjct: 575 ISGYVMKEQSEDAQMLFTRM----MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 191 VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
+ EL+ D +CS+LV Y KCGDL + + D + +A++ GYA+ GK EA
Sbjct: 631 KK--ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 251 RRVFD----SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR-HGVSGDVSTVANIL- 304
++F+ + V + SI+ G + L F M+R +G+ + +N++
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 305 ---SAGCSLLVVELVKQMHAHA 323
+G +EL+++M A
Sbjct: 749 ILGKSGKVKRALELIREMPFEA 770
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 285/571 (49%), Gaps = 66/571 (11%)
Query: 101 VSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVH 160
V F K + A +F+ MP ++ WN ++ G+ + GH KA SLF+ M L+ +
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE---IT 150
Query: 161 CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
D+ + T++ + + +L + +HA I G++++ + ++ + YGKCGDLDSA
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV--TVANTWISTYGKCGDLDSAK 208
Query: 221 RVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEME 280
V + R D+ V WNS+ Y + GE +
Sbjct: 209 LVFEAI-----------------------------DRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
A L+ M R D+ST N+ ++ + + + +H+HA +G DI
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDI-------- 291
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSI 400
EA +NT I++YS A+ +FD M+S+T +SW +
Sbjct: 292 ---------EA--------------INTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 401 LVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGL 460
+ G A+ EA+ +F M K D + S+IS C LE G+ + +A G
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 461 EFDHI-ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
+ D++ I +L+D Y KCG + R +FD + V+W T++ GYA NG EAL LF
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
+M +P+ ITF AVL AC H+G +E+G F MK YNI+P ++HYSCMVDL R
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G L EA++LI M + DA +W ++L C H N I + AAE + L+P+ Y++++
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 640 NVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
N+ A + W+G A++R +M +N++K PG S
Sbjct: 569 NIYAAAGMWDGFARIRSIMKQRNIKKYPGES 599
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 144/629 (22%), Positives = 239/629 (37%), Gaps = 169/629 (26%)
Query: 48 LDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMP----------------- 90
+D A ++F+ MP+ +A +WN ++ SGH +++ LF M
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 91 ----------EKTH------------YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV- 127
E H N +S + K GDL A +F+++ + V
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 128 -WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
WN++ YS G A L+ M + + D + +C + L G+ +H
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFK---PDLSTFINLAASCQNPETLTQGRLIH 279
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
+ I G + + + + ++ + Y K D SA + ++ S + ++SGYA G
Sbjct: 280 SHAIHLGTDQDIEAI--NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGD 337
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
M EALALF M + G D+ T+ +++S
Sbjct: 338 MD-------------------------------EALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 307 GCSLLVVELVKQMHAHACKIGVTHD-IVVASALLDAYSKSQGPHEACKFFGELKAYDTIL 365
+E K + A A G D +++ +AL+D YSK HE
Sbjct: 367 CGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHE--------------- 411
Query: 366 LNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDL 425
A+ IFD KT+++W +++ G A N EA+ +F +M LD
Sbjct: 412 ----------------ARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 426 KMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRK 485
K + +F +V+ ACA LE G + F V + IS L + C +GRK
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQV-----YNISPGLDHYSCMVDL--LGRK 508
Query: 486 VFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
G EAL L R M +P A + A+L+AC
Sbjct: 509 -----------------------GKLEEALELIRNM---SAKPDAGIWGALLNACKIHRN 542
Query: 546 VEEGRNLFDTMKHNYNINPEI-EHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMW--F 602
V+ +++ +N+ P++ Y M ++YA AG MW F
Sbjct: 543 VKIAEQAAESL---FNLEPQMAAPYVEMANIYAAAG-------------------MWDGF 580
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
+ +R + R I K E +IQ++ +N
Sbjct: 581 ARIRSIMKQ--RNIKKYPGESVIQVNGKN 607
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 139/317 (43%), Gaps = 34/317 (10%)
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHAC 324
WN I V + +E+L LF+ M+R G + T + A L V + +HAH
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKW 384
K D+ V +A +D + K C ++ A
Sbjct: 80 KSPFWSDVFVGTATVDMFVK-------------------------------CNSVDYAAK 108
Query: 385 IFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
+F+ M + +WN++L G ++ +A +F M + ++ D + ++I + + +
Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKS 168
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE--VSWNTIL 502
L+L E + I +G++ ++ + + Y KCG ++ + VF+ + + D VSWN++
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
Y+ G +A L+ M +P TF + ++C + + +GR L + +
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR-LIHSHAIHLGT 287
Query: 563 NPEIEHYSCMVDLYARA 579
+ +IE + + +Y+++
Sbjct: 288 DQDIEAINTFISMYSKS 304
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
+WN + P E++ +F M + + F+F V ACA + + E V
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
I D + T+ VD + KC V+ KVF+ M + D +WN +L G+ +G+ +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 516 TLFREMRCSGVRPSAITFTAVLSA 539
+LFREMR + + P ++T ++ +
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQS 162
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 92/251 (36%), Gaps = 47/251 (18%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
TL +GR +H + G + + N + YS+ A LFD M SW +
Sbjct: 270 ETLTQGRLIHSHAIHLGT-DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHY----------------------SW---------- 97
I + G +E+L LFHAM + W
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 98 --------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
N L+ ++K G + A +FD+ P K + W T+I GY+ G +AL LF
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCG-KQVHARVIVEGIELEFDKVLCSSLVK 208
M + H VL ACA +L G + H V I D C +V
Sbjct: 449 KMIDLDYKPNHI---TFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC--MVD 503
Query: 209 FYGKCGDLDSA 219
G+ G L+ A
Sbjct: 504 LLGRKGKLEEA 514
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 20/235 (8%)
Query: 5 LQGIGR--TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
+ G G+ +L G+ + G ++ N L+ YS+ G + +A +FD P+
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFD 118
+W T+I + +G E+L+LF M + H ++ ++ A A SG L+ F
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH 483
Query: 119 SMP----CKNGLV-WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
M GL ++ ++ ++G +AL L + MS P DAG+ +L AC
Sbjct: 484 IMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKP------DAGIWGALLNAC 537
Query: 174 ADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
+ +Q + ++ V + Y G D AR+ ++K+
Sbjct: 538 KIHRNVKIAEQAAESLFNLEPQMAAPYV---EMANIYAAAGMWDGFARIRSIMKQ 589
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 218/778 (28%), Positives = 349/778 (44%), Gaps = 157/778 (20%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GRQ+H K ++ + + ++ G + A F ++ N+ SWN++I +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 75 HSGHRNESLRLFHAM----PEKTHYSWNMLV----------------------------- 101
+G + + R+F +M T Y++ LV
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 102 --------SAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
SAFAKSG L A +F+ M +N + N ++ G ++ +A LF M+
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN- 301
Query: 154 DPLEMVHCDAGVLATVLGA-----CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
M+ +L + A+ L G++VH VI G+ ++F + + LV
Sbjct: 302 ---SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLVN 357
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
Y KCG + +ARRVF D+ +V WNS+
Sbjct: 358 MYAKCGSI-------------------------------ADARRVFYFMTDKDSVSWNSM 386
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
I+G NG +EA+ +K MRRH + T+ + LS+ SL +L +Q+H + K+G+
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 329 -------------------------------THDIVVASALLDAYSKSQG--PHEACKF- 354
HD V ++++ A ++S+ P F
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506
Query: 355 -------------------------FGELK------------AYDTILLNTMITVYSNCG 377
FGEL A + N +I Y CG
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 378 RIEDAKWIFDTMSSKT-LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
++ + IF M+ + ++WNS++ G N ++A+D+ M ++D F +A+V+
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
SA AS + LE G +V ++ LE D ++ ++LVD Y KCG ++ + F+ M +
Sbjct: 627 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSG-VRPSAITFTAVLSACDHTGLVEEGRNLFDT 555
SWN+++ GYA +G G EAL LF M+ G P +TF VLSAC H GL+EEG F++
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 746
Query: 556 MKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCI-AHGNR 614
M +Y + P IEH+SCM D+ RAG L + D IE+MP + + +W +VL C A+G +
Sbjct: 747 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 806
Query: 615 T-IGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
+GK AAE + QL+PEN Y+ L N+ A WE + R+ M D +V+K G SW
Sbjct: 807 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSW 864
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/558 (25%), Positives = 250/558 (44%), Gaps = 92/558 (16%)
Query: 77 GHRNESLRLFHAMPEKTH-----YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
GHR + R FH+ K Y N L++A+ ++GD A +FD MP +N + W I
Sbjct: 15 GHRGAA-RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC--GKQVHARV 189
+ GYS+ G ++AL + M E + + +VL AC + ++ G+Q+H
Sbjct: 74 VSGYSRNGEHKEALVFLRDM---VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHG-- 128
Query: 190 IVEGIELEFDKVLCSSLVKFYGKC-GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMR 248
++ + D V+ + L+ Y KC G + A G ++ + S ++++S Y+ AG R
Sbjct: 129 LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR 188
Query: 249 EARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
A R+F S M+ G T ++++ C
Sbjct: 189 SAFRIFSS-------------------------------MQYDGSRPTEYTFGSLVTTAC 217
Query: 309 SLLV--VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
SL V L++Q+ K G+ D+ V S L+ A++KS
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS--------------------- 256
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN-MLDL 425
G + A+ +F+ M ++ ++ N ++VGL + EA +F MN M+D+
Sbjct: 257 ----------GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 426 KMDKF-----SFASVISACASKSCLELGEQVFGKAITVGL-EFDHIISTSLVDFYCKCGF 479
+ + SF + A + L+ G +V G IT GL +F I LV+ Y KCG
Sbjct: 307 SPESYVILLSSFPEY--SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+ R+VF M D VSWN+++ G NG EA+ ++ MR + P + T + LS+
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 540 CDHTGLVEEGRNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
C + G+ + +++K ++N + + ++ LYA G L E + MP + D
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMP-EHDQ 481
Query: 599 NMWFSVLRGCIAHGNRTI 616
W S++ G +A R++
Sbjct: 482 VSWNSII-GALARSERSL 498
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 155/630 (24%), Positives = 265/630 (42%), Gaps = 114/630 (18%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESL---- 83
L+ + N L+ Y G A ++FDEMP N SW ++ + +G E+L
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 84 --------------------------------RLFHAMPEKTHYSW-----NMLVSAFAK 106
R H + K Y+ N+L+S + K
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 107 S-GDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGV 165
G + A F + KN + WN+II YS+ G R A +F +M D G
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
L T AC+ + E ++++C+ ++ G DL
Sbjct: 212 LVTT--ACS---------------LTEPDVRLLEQIMCT--IQKSGLLTDL--------- 243
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
F S LVS +A +G + AR+VF+ + AV N ++ G V EA LF
Sbjct: 244 ------FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELV-----KQMHAHACKIGVTHDIVVASALLD 340
M + + +LS+ + E V +++H H V+ + L+D
Sbjct: 298 MDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH----------VITTGLVD 346
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSI 400
+ + N ++ +Y+ CG I DA+ +F M+ K +SWNS+
Sbjct: 347 --------------------FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSM 386
Query: 401 LVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGL 460
+ GL +N C EA++ + M D+ F+ S +S+CAS +LG+Q+ G+++ +G+
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 461 EFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG-SEALTLFR 519
+ + +S +L+ Y + G++ RK+F M + D+VSWN+I+ A + EA+ F
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
+ +G + + ITF++VLSA E G+ + N NI E + ++ Y +
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKC 565
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCI 609
G + + M + D W S++ G I
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 180/423 (42%), Gaps = 85/423 (20%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L++GR++H + TG+++ + N L+ Y++ G + DA ++F M ++ SWN++I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 72 AHLHSG------HRNESLRLFHAMPEK----------THYSW------------------ 97
+G R +S+R +P W
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 98 -----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGY--SKRGHPRKALSLFKT 150
N L++ +A++G L +F SMP + + WN+II S+R P +
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 151 ----MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
L+ + + V + G GKQ+H + I E ++L
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFG--------ELGKQIHGLALKNNIADE--ATTENAL 558
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWN 266
+ YGKCG++D ++ FS +M E R V WN
Sbjct: 559 IACYGKCGEMDGCEKI---------FS------------RMAERRD---------NVTWN 588
Query: 267 SIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
S+ISGY+ N +AL L M + G D A +LSA S+ +E ++HA + +
Sbjct: 589 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 648
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
+ D+VV SAL+D YSK A +FF + ++ N+MI+ Y+ G+ E+A +F
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 387 DTM 389
+TM
Sbjct: 709 ETM 711
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
TL G ++H ++ L S + + L+ YS+ G LD A + F+ MP N++SWN++I
Sbjct: 634 TLERGMEVHACSVR-ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692
Query: 71 EAHLHSGHRNESLRLFHAMP-----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
+ G E+L+LF M H ++ ++SA + +G L+ F+SM G
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 752
Query: 126 LV-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
L ++ + + G K + M + P + + TVLGAC
Sbjct: 753 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKP------NVLIWRTVLGAC 799
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 211/789 (26%), Positives = 357/789 (45%), Gaps = 155/789 (19%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSG-----HRNESLRLFHAMP 90
N L+ YS+ G L A ++FD+MP + SWN+++ A+ S + ++ LF +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 91 EKTHYSWNM---------------------------------------LVSAFAKSGDLQ 111
+ Y+ M LV+ + K G ++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 112 LAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL---FKTMSLDPLEMVHCDAGVLAT 168
LF+ MP ++ ++WN ++ Y + G +A+ L F + L+P E+ +LA
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT---LRLLAR 254
Query: 169 VLGACADC-----FALNCGKQVHARVIV--EGIELEFDKVLCSSLVKFYG-------KCG 214
+ G +D FA + +I +G+ S+L+K + +C
Sbjct: 255 ISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECD 314
Query: 215 DLDSAARVAGVVKEVDDFSL--------------------SALVSGYANAGKMREARRVF 254
+ +A VK VD +L ++L++ Y K AR VF
Sbjct: 315 QVTFILMLATAVK-VDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLV-V 313
D+ ++ + WNS+I+G NG E+EA+ LF ++ R G+ D T+ ++L A SL +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 314 ELVKQMHAHACKIGVTHDIVVASALLDA------------------------------YS 343
L KQ+H HA KI D V++AL+DA Y+
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYT 493
Query: 344 KSQGPHEACKFFG-------------------------------ELKAY--------DTI 364
+S H+ K F ++ AY D
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD 424
+ + ++ +Y CG + A++ FD++ ++W +++ G +N A +F +M ++
Sbjct: 554 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
+ D+F+ A++ A + + LE G Q+ A+ + D + TSLVD Y KCG ++
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
+F + + +WN +L+G A +G G E L LF++M+ G++P +TF VLSAC H+G
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 545 LVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSV 604
LV E +M +Y I PEIEHYSC+ D RAG + +A +LIE M +A A+M+ ++
Sbjct: 734 LVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 605 LRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQ 664
L C G+ GK A K+++L+P + AY+ LSN+ A + W+ R +M V+
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 665 KIPGCSWAD 673
K PG SW +
Sbjct: 854 KDPGFSWIE 862
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/586 (26%), Positives = 260/586 (44%), Gaps = 76/586 (12%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKT 93
A L+ Y + G + + LF+EMP + WN +++A+L G + E++ L A
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 94 HYSWNMLVSAFAK-SGDLQLAHSLFDSMPCKNGLVWNTII---HGYSKRGHPRKALSLFK 149
+ + A+ SGD A + + + II G S+ H + +L K
Sbjct: 242 LNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLK 301
Query: 150 TMSLDPLEM-VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+ D +E V CD +L +L G+QVH + G++L +L S
Sbjct: 302 CFA-DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL----MLTVS--- 353
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
++L++ Y K AR VFD+ ++ + WNS+
Sbjct: 354 --------------------------NSLINMYCKLRKFGFARTVFDNMSERDLISWNSV 387
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLV-VELVKQMHAHACKIG 327
I+G NG E+EA+ LF ++ R G+ D T+ ++L A SL + L KQ+H HA KI
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFD 387
D V++AL+DAYS+++ EA F E +D
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFD------------------------- 481
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
L++WN+++ G ++ + + +F M+ + D F+ A+V C +
Sbjct: 482 ------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 448 GEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYAT 507
G+QV AI G + D +S+ ++D Y KCG + + FD + D+V+W T++ G
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF-DTMKHNYNINPEI 566
NG A +F +MR GV P T + A +E+GR + + +K N +P +
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655
Query: 567 EHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ +VD+YA+ G + +A L + + + W ++L G HG
Sbjct: 656 G--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHG 698
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 195/443 (44%), Gaps = 55/443 (12%)
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
GKC + AR+ + + F ++ L+S Y+ G + ARRVFD D+ V WNSI++
Sbjct: 58 GKC----THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 271 GYVLNGE-----EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
Y + E +A LF+ +R+ V T++ +L V + H +ACK
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVY------------ 373
IG+ D VA AL++ Y K E F E+ D +L N M+ Y
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 374 --------------------------SNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKN 407
S+ G+++ D S +I N L +
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHS 293
Query: 408 ACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIS 467
S + F M D++ D+ +F +++ L LG+QV A+ +GL+ +S
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 468 TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVR 527
SL++ YCK R VFD M + D +SWN+++ G A NG EA+ LF ++ G++
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFDTMK-HNYNINPEIEHY--SCMVDLYARAGCLGE 584
P T T+VL A + EG +L + H IN + + + ++D Y+R C+ E
Sbjct: 414 PDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 585 AIDLIEEMPFQADANMWFSVLRG 607
A L E F D W +++ G
Sbjct: 471 AEILFERHNF--DLVAWNAMMAG 491
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 154/620 (24%), Positives = 269/620 (43%), Gaps = 99/620 (15%)
Query: 26 GILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRL 85
G L +++T+++ +L C F+E P+ F N LI + G + R+
Sbjct: 44 GFLRNAITSSDLMLG-----KCTHARILTFEENPER--FLINNLISMYSKCGSLTYARRV 96
Query: 86 FHAMPEKTHYSWNMLVSAFAKSGD-----LQLAHSLFD------------------SMPC 122
F MP++ SWN +++A+A+S + +Q A LF +
Sbjct: 97 FDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCL 156
Query: 123 KNGLVW-NTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
+G VW + HGY+ + + LD E V AG L + L
Sbjct: 157 HSGYVWASESFHGYACK------------IGLDGDEFV---AGALVNIY--------LKF 193
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG------DLDSAARVAGVVKEVDDFSLS 235
GK +V+ E + D VL + ++K Y + G DL SA +G+ L
Sbjct: 194 GKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Query: 236 ALVSG-YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
A +SG ++AG+++ D+ + N +S Y+ +G+ L F M V
Sbjct: 253 ARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 295 GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
D T +L+ + + L +Q+H A K+G+ + V+++L++ Y K +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK-------LRK 365
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
FG A+ +FD MS + LISWNS++ G+A+N EA+
Sbjct: 366 FGF------------------------ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 415 DIFCRMNMLDLKMDKFSFASVISACAS-KSCLELGEQVFGKAITVGLEFDHIISTSLVDF 473
+F ++ LK D+++ SV+ A +S L L +QV AI + D +ST+L+D
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461
Query: 474 YCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITF 533
Y + ++ +F+ D V+WN ++ GY + G + L LF M G R T
Sbjct: 462 YSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 534 TAVLSACDHTGLVEEGRNLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
V C + +G+ + +K Y+++ + S ++D+Y + G + A + +
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSI 578
Query: 593 PFQADANMWFSVLRGCIAHG 612
P D W +++ GCI +G
Sbjct: 579 PVPDDV-AWTTMISGCIENG 597
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L +GRQ+H + LK N L+ Y++ G +DDA LF + N +WN ++
Sbjct: 634 LEQGRQIHANALKLNCTNDPF-VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 72 AHLHSGHRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
G E+L+LF M P+K + ++SA + SG + A+ SM G
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIG--VLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 126 LV-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
+ ++ + + G ++A +L ++MS++ A + T+L AC
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSME------ASASMYRTLLAACRVQGDTE 804
Query: 181 CGKQVHARVI 190
GK+V +++
Sbjct: 805 TGKRVATKLL 814
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 289/570 (50%), Gaps = 49/570 (8%)
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A S+ ++ + L WN +I Y+K + ++ +K M + + DA +VL A
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVS---KGIRPDAFTYPSVLKA 153
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C + + G+ VH + V + +C++L+ Y + ++ A R+ + E D
Sbjct: 154 CGETLDVAFGRVVHGSIEVSSYKSSL--YVCNALISMYKRFRNMGIARRLFDRMFERDAV 211
Query: 233 SLSALVSGYANAGKMREARRVFD----SRVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
S +A+++ YA+ G EA +FD S V+ + WN I G + G + AL L RM
Sbjct: 212 SWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM 271
Query: 289 RRHGVSGDVSTVANILS-AGCSLL-VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
R S D VA I+ CSL+ + L K++H A
Sbjct: 272 RNFPTSLD--PVAMIIGLKACSLIGAIRLGKEIHGLAIH--------------------- 308
Query: 347 GPHEACKFFGELKAYDTI--LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGL 404
+YD I + NT+IT+YS C + A +F +L +WNSI+ G
Sbjct: 309 ------------SSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGY 356
Query: 405 AKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
A+ EA + M + + + + AS++ CA + L+ G++ + D+
Sbjct: 357 AQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDY 416
Query: 465 -IISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRC 523
++ SLVD Y K G + ++V D M K DEV++ +++ GY G G AL LF+EM
Sbjct: 417 TMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTR 476
Query: 524 SGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLG 583
SG++P +T AVLSAC H+ LV EG LF M+ Y I P ++H+SCMVDLY RAG L
Sbjct: 477 SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLA 536
Query: 584 EAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLA 643
+A D+I MP++ W ++L C HGN IGK AAEK++++ PENPG Y+ ++N+ A
Sbjct: 537 KAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYA 596
Query: 644 TSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+ W A+VR +M D V+K PGC+W D
Sbjct: 597 AAGSWSKLAEVRTIMRDLGVKKDPGCAWID 626
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 203/491 (41%), Gaps = 43/491 (8%)
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGV--LATVLGACADCFALNCGKQVHARVIVEG 193
+ GH A F + L V D + A++L AC D A G QVHA I G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 194 IELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRV 253
+ E+ VL LV FY F+L EA+ +
Sbjct: 74 V--EYHSVLVPKLVTFYSA-------------------FNLH------------NEAQSI 100
Query: 254 FDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVV 313
++ + WN +I+ Y N E +A +KRM G+ D T ++L A L V
Sbjct: 101 IENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDV 160
Query: 314 ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVY 373
+ +H + V +AL+ Y + + A + F + D + N +I Y
Sbjct: 161 AFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCY 220
Query: 374 SNCGRIEDAKWIFDTM----SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
++ G +A +FD M ++I+WN I G + A+ + RM +D
Sbjct: 221 ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
+ + AC+ + LG+++ G AI + + +L+ Y KC + VF
Sbjct: 281 VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 490 MIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
+ +WN+I+ GYA EA L REM +G +P++IT ++L C ++ G
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG 400
Query: 550 RNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCI 609
+ + ++ +VD+YA++G + A + + M + D + S++ G
Sbjct: 401 KEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDG-- 457
Query: 610 AHGNRTIGKMA 620
+GN+ G +A
Sbjct: 458 -YGNQGEGGVA 467
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 197/508 (38%), Gaps = 110/508 (21%)
Query: 5 LQGIGRTLRE--GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
L+ G TL GR +H S ++ SSL N L+ Y R + A +LFD M + +
Sbjct: 151 LKACGETLDVAFGRVVHGS-IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERD 209
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQLAHSLFD 118
A SWN +I + G +E+ LF M E + +WN++ ++G+ A L
Sbjct: 210 AVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLIS 269
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA 178
M R P SLDP+ M+ L AC+ A
Sbjct: 270 RM-----------------RNFP---------TSLDPVAMI--------IGLKACSLIGA 295
Query: 179 LNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALV 238
+ GK++H I + D V ++L+ Y KC DL
Sbjct: 296 IRLGKEIHGLAIHSSYD-GIDNVR-NTLITMYSKCKDL---------------------- 331
Query: 239 SGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVS 298
R A VF + WNSIISGY + EA L + M G +
Sbjct: 332 ---------RHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSI 382
Query: 299 TVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL 358
T+A+IL + ++ K+ H + + D
Sbjct: 383 TLASILPLCARIANLQHGKEFHCYILRRKCFKDY-------------------------- 416
Query: 359 KAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFC 418
T+L N+++ VY+ G+I AK + D MS + +++ S++ G A+ +F
Sbjct: 417 ----TMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFK 472
Query: 419 RMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK-AITVGLE--FDHIISTSLVDFYC 475
M +K D + +V+SAC+ + GE++F K G+ H + +VD Y
Sbjct: 473 EMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF--SCMVDLYG 530
Query: 476 KCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+ GF+ + + M K +W T+L
Sbjct: 531 RAGFLAKAKDIIHNMPYKPSGATWATLL 558
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 215/777 (27%), Positives = 351/777 (45%), Gaps = 138/777 (17%)
Query: 3 MELQGIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
+EL G R + +GRQLH KT A +L+ Y + G LDDA ++FDEMP
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 63 AFSWNTLIEAHLHSGHRNESLRLF----------------------------------HA 88
AF+WNT+I A++ +G +L L+ H+
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHS 206
Query: 89 MPEK-----THYSWNMLVSAFAKSGDLQLAHSLFDSMPCK-NGLVWNTIIHGYSKRGHPR 142
+ K T + N LVS +AK+ DL A LFD K + ++WN+I+ YS G
Sbjct: 207 LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 266
Query: 143 KALSLFKTMSL-----------------DPLEMVHCDAGVLATVLGACAD------CFAL 179
+ L LF+ M + D + A+VL + C AL
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326
Query: 180 -----NCGKQVHARVIVEGIE-----------------------LEF-----------DK 200
CGK A I+ + LEF D+
Sbjct: 327 IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 386
Query: 201 VLCSSLVKFYGKCGDLDSAARV-AGVVKEVDDFSL---SALVSGYANAGKMREARRVFDS 256
V +S++ G+ +L + + A V+K D +L + L+ Y+ R F
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV 316
D+ + W ++I+GY N +EAL LF+ + + + D + +IL A L + +V
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIV 506
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
K++H H + G+ DT++ N ++ VY C
Sbjct: 507 KEIHCHILRKGLL--------------------------------DTVIQNELVDVYGKC 534
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
+ A +F+++ K ++SW S++ A N SEA+++F RM L D + ++
Sbjct: 535 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 594
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
SA AS S L G ++ + G + I+ ++VD Y CG ++ + VFD + + +
Sbjct: 595 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 654
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
+ +++ Y +G G A+ LF +MR V P I+F A+L AC H GL++EGR M
Sbjct: 655 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 714
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTI 616
+H Y + P EHY C+VD+ RA C+ EA + ++ M + A +W ++L C +H + I
Sbjct: 715 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 774
Query: 617 GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
G++AA+++++L+P+NPG + +SNV A W +VR M ++K PGCSW +
Sbjct: 775 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/723 (27%), Positives = 336/723 (46%), Gaps = 122/723 (16%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMP----- 90
N L F + G L +A ++FD MP+ + SWN +I + G ++L ++ M
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135
Query: 91 ----------------------------------EKTHYSWNMLVSAFAKSGDL-QLAHS 115
+K + N L+S +AK G +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 116 LFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA- 174
+F+S+ N + + +I G ++ +A+ +F+ M + V D+ L+ +L A
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCE---KGVQVDSVCLSNILSISAP 252
Query: 175 --------DCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV 226
+ + GKQ+H + G D L +SL++ Y K D++ A + +
Sbjct: 253 REGCDSLSEIYGNELGKQIHCLALRLG--FGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 227 KEVDDFSLSALVSGYAN-----------------------------------AGKMREAR 251
EV+ S + ++ G+ +G + R
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
R+F S WN+++SGY EA++ F++M+ + D +T++ ILS+ L
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMIT 371
+E KQ+H + ++ + + S L I
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGL-------------------------------IA 459
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLIS-WNSILVGLAKNACPSEAIDIFCRMNMLD-LKMDK 429
VYS C ++E ++ IFD ++ I+ WNS++ G N ++A+ +F RM+ L ++
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
SFA+V+S+C+ L G Q G + G D + T+L D YCKCG ++ R+ FD
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 490 MIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
+++ + V WN ++ GY NG G EA+ L+R+M SG +P ITF +VL+AC H+GLVE G
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Query: 550 RNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCI 609
+ +M+ + I PE++HY C+VD RAG L +A L E P+++ + +W +L C
Sbjct: 640 LEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCR 699
Query: 610 AHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGC 669
HG+ ++ + AEK+++LDP++ AY+ LSN ++ W+ SA ++ LM V K PG
Sbjct: 700 VHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQ 759
Query: 670 SWA 672
SW
Sbjct: 760 SWT 762
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/606 (25%), Positives = 270/606 (44%), Gaps = 94/606 (15%)
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDS 119
+++ + N L++ ++ G + + ++F M + YSWN ++ K GDL A +FD
Sbjct: 38 KSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDG 97
Query: 120 MPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD---PLEMVHCDAGVLATVLGACADC 176
MP ++ + WN +I ++G KAL ++K M D P LA+VL AC+
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRF------TLASVLSACSKV 151
Query: 177 FALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL-DSAARVAGVVKEVDDFSLS 235
G + H + G L+ + + ++L+ Y KCG + D RV + + ++ S +
Sbjct: 152 LDGVFGMRCHGVAVKTG--LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYT 209
Query: 236 ALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
A++ G A K+ +EA+ +F+ M GV
Sbjct: 210 AVIGGLARENKV-------------------------------LEAVQMFRLMCEKGVQV 238
Query: 296 DVSTVANILS-----AGCSLLVV----ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
D ++NILS GC L EL KQ+H A ++G D+ + ++LL+ Y+K++
Sbjct: 239 DSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNK 298
Query: 347 GPHEACKFFGELKAYDTILLNTM--------------------------------ITVYS 374
+ A F E+ + + N M I+V
Sbjct: 299 DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 375 NC---GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
C G +E + IF ++ ++ +WN++L G + EAI F +M +LK DK +
Sbjct: 359 ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 418
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI 491
+ ++S+CA LE G+Q+ G I + + I + L+ Y +C +EI +FD I
Sbjct: 419 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 478
Query: 492 -KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVR-PSAITFTAVLSACDHTGLVEEG 549
+ D WN+++ G+ N ++AL LFR M + V P+ +F VLS+C + G
Sbjct: 479 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 538
Query: 550 RNLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGC 608
R +K Y + +E + + D+Y + G + A + + + + +W ++ G
Sbjct: 539 RQFHGLVVKSGYVSDSFVE--TALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHG- 594
Query: 609 IAHGNR 614
H R
Sbjct: 595 YGHNGR 600
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 199/424 (46%), Gaps = 48/424 (11%)
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGY 241
GK +H ++ G ++ D LC+ L+ Y +CGD D A +V + D +S +A ++
Sbjct: 25 GKVIHGFIVRMG--MKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 242 ANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVA 301
G + EA VFD ++ V WN++IS V G E +AL ++KRM G T+A
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 302 NILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY 361
++LSA +L + H A K G+ +I V +ALL Y+K
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAK----------------- 185
Query: 362 DTILLNTMITVYSNCGRIED-AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
CG I D +F+++S +S+ +++ GLA+ EA+ +F M
Sbjct: 186 --------------CGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
Query: 421 NMLDLKMDKFSFASVISACASKSCL---------ELGEQVFGKAITVGLEFDHIISTSLV 471
+++D ++++S A + ELG+Q+ A+ +G D ++ SL+
Sbjct: 232 CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLL 291
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
+ Y K + +F M + + VSWN +++G+ +++ MR SG +P+ +
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
T +VL AC +G VE GR +F ++ P + ++ M+ Y+ EAI +
Sbjct: 352 TCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 592 MPFQ 595
M FQ
Sbjct: 407 MQFQ 410
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 212/505 (41%), Gaps = 80/505 (15%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H L+ G L N LL+ Y++ ++ A +F EMP+ N SWN +I
Sbjct: 268 GKQIHCLALRLG-FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 75 HSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNT 130
++S+ M + + ++ A +SGD++ +F S+P + WN
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNA 386
Query: 131 IIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVI 190
++ GYS H +A+S F+ M L+ D L+ +L +CA L GKQ+H VI
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKP---DKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 191 VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
E+ + + S L+ Y +C KM +
Sbjct: 444 --RTEISKNSHIVSGLIAVYSEC-------------------------------EKMEIS 470
Query: 251 RRVFDSRVDQCAV-LWNSIISGYVLNGEEMEALALFKRMRRHGV-SGDVSTVANILSAGC 308
+FD +++ + WNS+ISG+ N + +AL LF+RM + V + ++ A +LS+
Sbjct: 471 ECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT 368
L + +Q H K G D V +AL D Y K A +FF + +T++ N
Sbjct: 531 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
MI Y + GR EA+ ++ +M K D
Sbjct: 591 MIHGYGHNGR-------------------------------GDEAVGLYRKMISSGEKPD 619
Query: 429 KFSFASVISACASKSCLELGEQVFG---KAITVGLEFDHIISTSLVDFYCKCGFVEIGRK 485
+F SV++AC+ +E G ++ + + E DH I +VD + G +E K
Sbjct: 620 GITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYI--CIVDCLGRAGRLEDAEK 677
Query: 486 VFDGM-IKTDEVSWNTILMGYATNG 509
+ + K+ V W +L +G
Sbjct: 678 LAEATPYKSSSVLWEILLSSCRVHG 702
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 278/533 (52%), Gaps = 41/533 (7%)
Query: 142 RKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
R+A+ L P A ++ C+ AL GK+VH + G V
Sbjct: 71 REAVQLLGRAKKPP-------ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGI--V 121
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC 261
+ + L++ Y KCG L A +V + D S + +V+GYA G + EAR++FD ++
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD 181
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVS-GDVSTVANILSAGCSLLVVELVKQMH 320
+ W ++++GYV + EAL L+ M+R S ++ TV+ ++A ++ + K++H
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIE 380
H + G+ D V+ S+L+D Y K CG I+
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGK-------------------------------CGCID 270
Query: 381 DAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA 440
+A+ IFD + K ++SW S++ K++ E +F + + ++++FA V++ACA
Sbjct: 271 EARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330
Query: 441 SKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNT 500
+ ELG+QV G VG + S+SLVD Y KCG +E + V DG K D VSW +
Sbjct: 331 DLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTS 390
Query: 501 ILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNY 560
++ G A NG EAL F + SG +P +TF VLSAC H GLVE+G F ++ +
Sbjct: 391 LIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH 450
Query: 561 NINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMA 620
++ +HY+C+VDL AR+G + +I EMP + +W SVL GC +GN + + A
Sbjct: 451 RLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEA 510
Query: 621 AEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
A+++ +++PENP Y+ ++N+ A + WE ++R+ M + V K PG SW +
Sbjct: 511 AQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTE 563
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 209/503 (41%), Gaps = 102/503 (20%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R L EG+++H +G + + NRLL+ Y++ G L DA ++FDEMP + SWN +
Sbjct: 99 RALEEGKKVHEHIRTSGFV-PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVM 157
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
+ + G E+ +LF M EK YSW +V+
Sbjct: 158 VNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVT--------------------------- 190
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
GY K+ P +AL L+ M P + +A A C + GK++H +
Sbjct: 191 ----GYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC--IRRGKEIHGHI 244
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
+ G L+ D+VL SSL+ YGKCG +D E
Sbjct: 245 VRAG--LDSDEVLWSSLMDMYGKCGCID-------------------------------E 271
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
AR +FD V++ V W S+I Y + E +LF + + T A +L+A
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
L EL KQ+H + ++G +S+L+D Y+K
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK------------------------- 366
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
CG IE AK + D L+SW S++ G A+N P EA+ F + K D
Sbjct: 367 ------CGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIS--TSLVDFYCKCGFVEIGRKVF 487
+F +V+SAC +E G + F +IT H T LVD + G E + V
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFF-YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 488 DGM-IKTDEVSWNTILMGYATNG 509
M +K + W ++L G +T G
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYG 502
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 174/344 (50%), Gaps = 9/344 (2%)
Query: 273 VLNGEEM--EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
VL G+++ EA+ L R ++ ST N++ +E K++H H G
Sbjct: 63 VLCGQKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 118
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
IV+ + LL Y+K +A K F E+ D N M+ Y+ G +E+A+ +FD M+
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNML-DLKMDKFSFASVISACASKSCLELGE 449
K SW +++ G K P EA+ ++ M + + + + F+ + ++A A+ C+ G+
Sbjct: 179 EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNG 509
++ G + GL+ D ++ +SL+D Y KCG ++ R +FD +++ D VSW +++ Y +
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHY 569
E +LF E+ S RP+ TF VL+AC E G+ + M +P
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFAS 357
Query: 570 SCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN 613
S +VD+Y + G + A +++ P + D W S++ GC +G
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQ 400
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 214/785 (27%), Positives = 345/785 (43%), Gaps = 160/785 (20%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT-------NA 63
L G+ +H S + G A L+ Y + G LD A Q+FD Q+ +
Sbjct: 75 NLSYGKTIHGSVVVLGWRYDPFI-ATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDV 133
Query: 64 FSWNTLIEAHLHSGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQ-------- 111
WN++I+ + E + F M +S +++VS K G+ +
Sbjct: 134 TVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIH 193
Query: 112 -------------LAHSLFDSMPCKNGL------------------VWNTIIHGYSKRGH 140
L +L D M K GL +WN +I G+ G
Sbjct: 194 GFMLRNSLDTDSFLKTALID-MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI 252
Query: 141 PRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK 200
+L L+ + +++V LGAC+ G+Q+H V+ G L D
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTS---FTGALGACSQSENSGFGRQIHCDVVKMG--LHNDP 307
Query: 201 VLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ 260
+C+SL+ Y KC G + EA VF VD+
Sbjct: 308 YVCTSLLSMYSKC-------------------------------GMVGEAETVFSCVVDK 336
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMH 320
+WN++++ Y N AL LF MR+ V D T++N++S L + K +H
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 321 AHACKIGVTHDIVVASALLDAYS-------------------------------KSQGPH 349
A K + + SALL YS K+
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 350 EACKFFGELKAYDT------------------------------------ILLN-----T 368
EA K FG++K D ++LN +
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
+I +YS CG E A +F +MS++ +++WNS++ ++N P +ID+F M + D
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 429 KFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFD 488
S SV+ A +S + L G+ + G + +G+ D + +L+D Y KCGF + +F
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 489 GMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEE 548
M ++WN ++ GY ++G AL+LF EM+ +G P +TF +++SAC+H+G VEE
Sbjct: 637 KMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEE 696
Query: 549 GRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGC 608
G+N+F+ MK +Y I P +EHY+ MVDL RAG L EA I+ MP +AD+++W +L
Sbjct: 697 GKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSAS 756
Query: 609 IAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPG 668
H N +G ++AEK+++++PE Y+QL N+ + +A++ LM +K + K PG
Sbjct: 757 RTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPG 816
Query: 669 CSWAD 673
CSW +
Sbjct: 817 CSWIE 821
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 201/487 (41%), Gaps = 64/487 (13%)
Query: 129 NTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHAR 188
N+ I ++G +AL L+ D ++L AC+ L+ GK +H
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKH--DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 189 VIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMR 248
V+V G +D + +SLV Y KCG LD A +V G++ +
Sbjct: 86 VVVLG--WRYDPFIATSLVNMYVKCGFLDYAVQV---------------FDGWSQSQSGV 128
Query: 249 EARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
AR V +WNS+I GY E + F+RM GV D +++ ++S C
Sbjct: 129 SARDV---------TVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 309 SL--LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
E KQ+H + + D + +AL+D Y K +A + F E++ ++L
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
WN ++VG + ++D++ +K
Sbjct: 240 ------------------------------WNVMIVGFGGSGICESSLDLYMLAKNNSVK 269
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
+ SF + AC+ G Q+ + +GL D + TSL+ Y KCG V V
Sbjct: 270 LVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 487 FDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLV 546
F ++ WN ++ YA N YG AL LF MR V P + T + V+S C GL
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 547 EEGRNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVL 605
G+++ + K IE S ++ LY++ GC +A + + M + D W S++
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLI 446
Query: 606 RGCIAHG 612
G +G
Sbjct: 447 SGLCKNG 453
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 194/673 (28%), Positives = 314/673 (46%), Gaps = 118/673 (17%)
Query: 37 RLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAM------- 89
R L+ ++ ++DA QLFDEM + +AF WN +I+ G E+++ + M
Sbjct: 69 RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKA 128
Query: 90 --------------------PEKTH------------YSWNMLVSAFAKSGDLQLAHSLF 117
+K H Y N L+S + K G A +F
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 118 DSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHC----DAGVLATVLGAC 173
+ MP ++ + WN++I GY G +L LFK EM+ C D + LGAC
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFK-------EMLKCGFKPDRFSTMSALGAC 241
Query: 174 ADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFS 233
+ ++ GK++H + IE GD+
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIE-----------------TGDV---------------MV 269
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM-RRHG 292
+++++ Y+ G++ A R+F+ + + V WN +I Y NG +A F++M ++G
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
+ DV T N+L A L + +H +A + G +V+ +AL+D
Sbjct: 330 LQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETALID------------ 373
Query: 353 KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
+Y CG+++ A+ IFD M+ K +ISWNSI+ +N
Sbjct: 374 -------------------MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
A+++F + L D + AS++ A A L G ++ + + II SLV
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y CG +E RK F+ ++ D VSWN+I+M YA +G+G ++ LF EM S V P+ T
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
F ++L+AC +G+V+EG F++MK Y I+P IEHY CM+DL R G A +EEM
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Query: 593 PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSA 652
PF A +W S+L H + TI + AAE+I +++ +N G Y+ L N+ A + WE
Sbjct: 595 PFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVN 654
Query: 653 QVRELMIDKNVQK 665
+++ LM K + +
Sbjct: 655 RIKLLMESKGISR 667
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 246/577 (42%), Gaps = 82/577 (14%)
Query: 101 VSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVH 160
+ FA S ++ A LFD M + +WN +I G++ G +A+ + M V
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG---VK 127
Query: 161 CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
D V+ + A +L GK++HA VI G D +C+SL+ Y K G
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG--FVSDVYVCNSLISLYMKLG------ 179
Query: 221 RVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEME 280
+A +VF+ ++ V WNS+ISGY+ G+
Sbjct: 180 -------------------------CAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS 214
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV-THDIVVASALL 339
+L LFK M + G D + + L A + ++ K++H HA + + T D++V +++L
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
D YSK A + F + + + N MI Y+ GR+ DA F MS +
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN------ 328
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
GL D+ +N+L AS I LE G + G A+ G
Sbjct: 329 ---GLQP--------DVITSINLLP--------ASAI--------LE-GRTIHGYAMRRG 360
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
++ T+L+D Y +CG ++ +FD M + + +SWN+I+ Y NG AL LF+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFD-TMKHNYNINPEIEHYSCMVDLYAR 578
E+ S + P + T ++L A + + EGR + +K Y N I + +V +YA
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII--LNSLVHMYAM 478
Query: 579 AGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG-NRTIGKMAAEKIIQLDPENPGAYIQ 637
G L +A + + D W S++ HG R + +E I N +
Sbjct: 479 CGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 638 LSNVLATS----EDWEG-SAQVRELMIDKNVQKIPGC 669
L + S E WE + RE ID ++ GC
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHY-GC 573
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 215/482 (44%), Gaps = 111/482 (23%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+L EG+++H +K G + S + N L+ Y + GC DA ++F+EMP+ + SWN++I
Sbjct: 145 SLEEGKKIHAMVIKLGFV-SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203
Query: 71 EAHLHSGHRNESLRLFHAM------PEK----------TH-YSWNM-------------- 99
+L G SL LF M P++ +H YS M
Sbjct: 204 SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263
Query: 100 ---------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
++ ++K G++ A +F+ M +N + WN +I Y++ G A F+
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
MS E V+ ++ A A+ G+ +H + G VL ++L+ Y
Sbjct: 324 MS----EQNGLQPDVITSINLLPAS--AILEGRTIHGYAMRRGFLPHM--VLETALIDMY 375
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
G+CG L SA EV +FD ++ + WNSII+
Sbjct: 376 GECGQLKSA--------EV-----------------------IFDRMAEKNVISWNSIIA 404
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
YV NG+ AL LF+ + + D +T+A+IL A L + +++HA+ K
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK----- 459
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
+++ +TI+LN+++ +Y+ CG +EDA+ F+ +
Sbjct: 460 ---------------------SRYWS-----NTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
K ++SWNSI++ A + ++ +F M + +K +FAS+++AC+ ++ G +
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 451 VF 452
F
Sbjct: 554 YF 555
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 185/394 (46%), Gaps = 47/394 (11%)
Query: 225 VVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALAL 284
V K+V+D +L+ + G+A++ M +A ++FD A LWN +I G+ G +EA+
Sbjct: 58 VTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQF 117
Query: 285 FKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSK 344
+ RM GV D T ++ + + +E K++HA K+G D+ V ++L+ Y K
Sbjct: 118 YSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK 177
Query: 345 SQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGL 404
+A K F E+ D ++SWNS++ G
Sbjct: 178 LGCAWDAEKVFEEMPERD-------------------------------IVSWNSMISGY 206
Query: 405 AKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEF-D 463
++ +F M K D+FS S + AC+ ++G+++ A+ +E D
Sbjct: 207 LALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGD 266
Query: 464 HIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM-R 522
++ TS++D Y K G V ++F+GMI+ + V+WN ++ YA NG ++A F++M
Sbjct: 267 VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326
Query: 523 CSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNIN----PEIEHYSCMVDLYAR 578
+G++P IT +L A + EGR + H Y + P + + ++D+Y
Sbjct: 327 QNGLQPDVITSINLLPA----SAILEGRTI-----HGYAMRRGFLPHMVLETALIDMYGE 377
Query: 579 AGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
G L A + + M + + W S++ + +G
Sbjct: 378 CGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNG 410
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 103/249 (41%), Gaps = 48/249 (19%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
EGR +H ++ G L + L+ Y G L A +FD M + N SWN++I A+
Sbjct: 348 EGRTIHGYAMRRGFL-PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 74 LHSGHRNESLRLF----------------------------------HAMPEKTHYSW-- 97
+ +G +L LF HA K+ Y W
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY-WSN 465
Query: 98 ----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
N LV +A GDL+ A F+ + K+ + WN+II Y+ G R ++ LF M
Sbjct: 466 TIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM-- 523
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSSLVKFYGK 212
V+ + A++L AC+ ++ G + + E GI+ + C ++ G+
Sbjct: 524 -IASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGC--MLDLIGR 580
Query: 213 CGDLDSAAR 221
G+ +A R
Sbjct: 581 TGNFSAAKR 589
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 238/421 (56%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
A+ VFD LWN +I G+ + E +L L++RM + T ++L A +
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
L E Q+HA K+G +D+ ++L+++Y+ + A F + D + N++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
I Y G+++ A +F M+ K ISW +++ G + EA+ +F M D++ D
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
S A+ +SACA LE G+ + + D ++ L+D Y KCG +E +VF
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 490 MIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
+ K +W ++ GYA +G+G EA++ F EM+ G++P+ ITFTAVL+AC +TGLVEEG
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 550 RNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCI 609
+ +F +M+ +YN+ P IEHY C+VDL RAG L EA I+EMP + +A +W ++L+ C
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 610 AHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGC 669
H N +G+ E +I +DP + G Y+ +N+ A + W+ +A+ R LM ++ V K+PGC
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 670 S 670
S
Sbjct: 488 S 488
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 9/225 (4%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNESLRLFHAM 89
T LL+ S ++ TQ+ ++ + + ++ N+LI ++ +G+ + LF +
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 90 PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
PE SWN ++ + K+G + +A +LF M KN + W T+I GY + ++AL LF
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
M +E D LA L ACA AL GK +H+ + + D VL L+
Sbjct: 237 EMQNSDVE---PDNVSLANALSACAQLGALEQGKWIHS--YLNKTRIRMDSVLGCVLIDM 291
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
Y KCG+++ A V +K+ + +AL+SGYA G REA F
Sbjct: 292 YAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKF 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 13/211 (6%)
Query: 423 LDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDF---YCKCGF 479
L+ + + S + C+ + L+ Q+ + + GL D T + F F
Sbjct: 8 FSLEHNLYETMSCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDF 64
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+ + VFDG + D WN ++ G++ + +L L++ M CS +A TF ++L A
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 540 CDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
C + EE + + ++ + +++ YA G A L + +P + D
Sbjct: 125 CSNLSAFEETTQIHAQIT-KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDV 182
Query: 600 MWFSVLRGCIAHGNRTIG-----KMAAEKII 625
W SV++G + G I KMA + I
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 249/444 (56%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D F + + YA+ G++ AR VFD + V WN++I Y G EA LF+ M+
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
V D + NI+SA + + ++ + V D + +AL+ Y+ +
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 350 EACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNAC 409
A +FF ++ + + M++ YS CGR++DA+ IFD K L+ W +++ ++
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
P EA+ +F M +K D S SVISACA+ L+ + V GLE + I+ +
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 470 LVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS 529
L++ Y KCG ++ R VF+ M + + VSW++++ + +G S+AL+LF M+ V P+
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 530 AITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLI 589
+TF VL C H+GLVEEG+ +F +M YNI P++EHY CMVDL+ RA L EA+++I
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 590 EEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWE 649
E MP ++ +W S++ C HG +GK AA++I++L+P++ GA + +SN+ A + WE
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 650 GSAQVRELMIDKNVQKIPGCSWAD 673
+R +M +KNV K G S D
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRID 588
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 169/357 (47%), Gaps = 14/357 (3%)
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
++++N + + E + ++R+R G D + IL A + + ++H
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
A KI D V + +D Y+ + A F E+ D + NTMI Y G +++
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 382 AKWIFDTMSSKTLISWNSIL------VGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
A +F+ M ++ IL G N + AI F N D++MD ++
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN--DVRMDTHLLTAL 253
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
++ A C+++ + F K L +ST++V Y KCG ++ + +FD K D
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNL----FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT 555
V W T++ Y + Y EAL +F EM CSG++P ++ +V+SAC + G++++ + +
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 556 MKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ H + E+ + ++++YA+ G L D+ E+MP + + W S++ HG
Sbjct: 370 I-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHG 424
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 199/415 (47%), Gaps = 52/415 (12%)
Query: 104 FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVH 160
+A G + A ++FD M ++ + WNT+I Y + G +A LF+ M ++ P EM+
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 161 CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
C+ ++ AC + + ++ +I + + D L ++LV Y G +D A
Sbjct: 216 CN------IVSACGRTGNMRYNRAIYEFLIENDVRM--DTHLLTALVTMYAGAGCMDMAR 267
Query: 221 RVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEME 280
+ + F +A+VSGY+ G++ +A+ +FD + V W ++IS YV + E
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
AL +F+ M G+ DV ++ +++SA +L +++ K +H+ G+ ++ + +AL++
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSI 400
Y+K CG ++ + +F+ M + ++SW+S+
Sbjct: 388 MYAK-------------------------------CGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 401 LVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA----- 455
+ L+ + S+A+ +F RM +++ ++ +F V+ C+ +E G+++F
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNG 509
IT LE +VD + + + +V + M + ++ V W +++ +G
Sbjct: 477 ITPKLEH----YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 143/369 (38%), Gaps = 110/369 (29%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L EG +LH K L + Y+ G ++ A +FDEM + +WNT+IE
Sbjct: 127 LFEGMELHGVAFKIATLCDPFVETG-FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 72 AHLHSGHRNESLRLF------HAMPEK--------------------------------- 92
+ G +E+ +LF + MP++
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 93 -THYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV------------------------ 127
TH LV+ +A +G + +A F M +N V
Sbjct: 246 DTHL-LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 128 -------WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
W T+I Y + +P++AL +F+ M ++ D + +V+ ACA+ L+
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP---DVVSMFSVISACANLGILD 361
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSG 240
K VH+ + V G+E E + ++L+ Y KCG LD+
Sbjct: 362 KAKWVHSCIHVNGLESELS--INNALINMYAKCGGLDA---------------------- 397
Query: 241 YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTV 300
R VF+ + V W+S+I+ ++GE +AL+LF RM++ V + T
Sbjct: 398 ---------TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTF 448
Query: 301 ANILSAGCS 309
+L GCS
Sbjct: 449 VGVL-YGCS 456
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 118/296 (39%), Gaps = 77/296 (26%)
Query: 22 FLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNE 81
F K + N ++TA ++ YS+ G LDDA +FD+ + + W T+I A++ S + E
Sbjct: 270 FRKMSVRNLFVSTA--MVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 82 SLRLFHAM------PEKTHY----------------SW-----------------NMLVS 102
+LR+F M P+ W N L++
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 103 AFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCD 162
+AK G L +F+ MP +N + W+++I+ S G ALSLF M E V +
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMK---QENVEPN 444
Query: 163 AGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV 222
VL C+ + GK++ A + D+ + ++ YG DL
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMT--------DEYNITPKLEHYGCMVDL------ 490
Query: 223 AGVVKEVDDFSLSALVSGYANAGKMREARRVFDS-RVDQCAVLWNSIISGYVLNGE 277
+ A +REA V +S V V+W S++S ++GE
Sbjct: 491 ------------------FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFH 87
L S L+ N L+ Y++ G LD +F++MP+ N SW+++I A G +++L LF
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 88 AMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHGYSKR 138
M E ++ ++ + SG ++ +F SM + + + ++ + +
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 139 GHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEF 198
R+AL + ++M V + + +++ AC L GK R+ +ELE
Sbjct: 495 NLLREALEVIESMP------VASNVVIWGSLMSACRIHGELELGKFAAKRI----LELEP 544
Query: 199 DK----VLCSSLVKFYGKCGDLDSAARV 222
D VL S++ + D+ + RV
Sbjct: 545 DHDGALVLMSNIYAREQRWEDVRNIRRV 572
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 202/699 (28%), Positives = 330/699 (47%), Gaps = 111/699 (15%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L G ++H +K G+ + ++ + LL Y + G L DA ++FD MP + +W+TL+
Sbjct: 117 LSVGGKVHGRIIKGGVDDDAVIETS-LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS 175
Query: 72 AHLHSGHRNESLRLFHAM------PEKT-------------------------------- 93
+ L +G ++LR+F M P+
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 94 -HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
N L++ ++K GDL + +F+ + KN + W +I Y++ KAL F M
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
+E + L +VL +C + GK VH + ++ ++
Sbjct: 296 KSGIE---PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE------------- 339
Query: 213 CGDLDSAARVAGVVKEVDDFSLS-ALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
SLS ALV YA GK+ + V D+ V WNS+IS
Sbjct: 340 --------------------SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
Y G ++AL LF++M + D T+A+ +SA + +V L KQ+H H + V+
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-- 437
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
D + N++I +YS G ++ A +F+ +
Sbjct: 438 ------------------------------DEFVQNSLIDMYSKSGSVDSASTVFNQIKH 467
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
+++++WNS+L G ++N EAI +F M L+M++ +F +VI AC+S LE G+ V
Sbjct: 468 RSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWV 527
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG 511
K I GL+ D T+L+D Y KCG + VF M VSW++++ Y +G
Sbjct: 528 HHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRI 586
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
A++ F +M SG +P+ + F VLSAC H+G VEEG+ F+ MK ++ ++P EH++C
Sbjct: 587 GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SFGVSPNSEHFAC 645
Query: 572 MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
+DL +R+G L EA I+EMPF ADA++W S++ GC H I K + + ++
Sbjct: 646 FIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD 705
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
G Y LSN+ A +WE ++R M N++K+PG S
Sbjct: 706 TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 232/519 (44%), Gaps = 78/519 (15%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
L+ ++A G + +F++ P + ++ +I A+ L+ + E
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL---VSETT 96
Query: 160 HCDAGVLATVLGACADCFA-LNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDS 218
V +VL ACA L+ G +VH R+I G++ D V+ +SL+ YG+ G+L
Sbjct: 97 QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD--DDAVIETSLLCMYGQTGNLS- 153
Query: 219 AARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEE 278
+A +VFD + V W++++S + NGE
Sbjct: 154 ------------------------------DAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASAL 338
++AL +FK M GV D T+ +++ L + + + +H +
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR------------- 230
Query: 339 LDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWN 398
K F D L N+++T+YS CG + ++ IF+ ++ K +SW
Sbjct: 231 --------------KMFD----LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT 272
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV 458
+++ + +A+ F M ++ + + SV+S+C + G+ V G A+
Sbjct: 273 AMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR 332
Query: 459 GLEFDH-IISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
L+ ++ +S +LV+ Y +CG + V + + V+WN+++ YA G +AL L
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGL 392
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH---YSCMVD 574
FR+M ++P A T + +SAC++ GLV G+ + H + I ++ + ++D
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI-----HGHVIRTDVSDEFVQNSLID 447
Query: 575 LYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN 613
+Y+++G + A + ++ ++ W S+L G +GN
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVT-WNSMLCGFSQNGN 485
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 33/242 (13%)
Query: 313 VELVKQMHAHACKIG-VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMIT 371
+ LV Q+HAH G + D + + L+++Y+ P + F D+ + +I
Sbjct: 14 LRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIK 73
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
C ++ AID++ R+ ++ KF
Sbjct: 74 CNVWCHLLD-------------------------------AAIDLYHRLVSETTQISKFV 102
Query: 432 FASVISACA-SKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
F SV+ ACA S+ L +G +V G+ I G++ D +I TSL+ Y + G + KVFDGM
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR 550
D V+W+T++ NG +AL +F+ M GV P A+T +V+ C G + R
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 551 NL 552
++
Sbjct: 223 SV 224
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 192/685 (28%), Positives = 320/685 (46%), Gaps = 107/685 (15%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFH 87
S L N L+ YSR G L A Q+FDEMP + SWN+LI + G+ E+L ++H
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 88 AM------PEKTHYSWNM---------------------------------LVSAFAKSG 108
+ P+ S + LV+ + K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 109 DLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLAT 168
A +FD M ++ + +NT+I GY K +++ +F L+ L+ D +++
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF----LENLDQFKPDLLTVSS 312
Query: 169 VLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
VL AC L+ K ++ ++ G LE + + L+ Y KCGD+ +A V ++
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLE--STVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 229 VDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
D S ++++SGY +G + MEA+ LFK M
Sbjct: 371 KDTVSWNSIISGYIQSGDL-------------------------------MEAMKLFKMM 399
Query: 289 RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
D T ++S L ++ K +H++ K G+ D+ V++AL+D Y+K
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEV 459
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
++ K F + DT+ NT+I S C R D F T
Sbjct: 460 GDSLKIFSSMGTGDTVTWNTVI---SACVRFGD----FAT-------------------- 492
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIST 468
+ + +M ++ D +F + CAS + LG+++ + G E + I
Sbjct: 493 ----GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 469 SLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRP 528
+L++ Y KCG +E +VF+ M + D V+W ++ Y G G +AL F +M SG+ P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 529 SAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDL 588
++ F A++ AC H+GLV+EG F+ MK +Y I+P IEHY+C+VDL +R+ + +A +
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 589 IEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDW 648
I+ MP + DA++W SVLR C G+ + + +II+L+P++PG I SN A W
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 649 EGSAQVRELMIDKNVQKIPGCSWAD 673
+ + +R+ + DK++ K PG SW +
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIE 753
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 219/498 (43%), Gaps = 72/498 (14%)
Query: 121 PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
P KN +WN+II +SK G +AL + + V D +V+ ACA F
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK---VSPDKYTFPSVIKACAGLFDAE 123
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSG 240
G V+ +++ G E D F +ALV
Sbjct: 124 MGDLVYEQILDMGFE---------------------------------SDLFVGNALVDM 150
Query: 241 YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTV 300
Y+ G + AR+VFD + V WNS+ISGY +G EAL ++ ++ + D TV
Sbjct: 151 YSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTV 210
Query: 301 ANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA 360
+++L A +LLVV+ + +H A K GV +VV + L+ Y K + P +A + F E+
Sbjct: 211 SSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV 270
Query: 361 YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
D++ NTMI Y +E E++ +F
Sbjct: 271 RDSVSYNTMICGYLKLEMVE-------------------------------ESVRMFLE- 298
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
N+ K D + +SV+ AC L L + ++ + G + + L+D Y KCG +
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
R VF+ M D VSWN+I+ GY +G EA+ LF+ M + IT+ ++S
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 541 DHTGLVEEGRNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
++ G+ L + +K I+ + + ++D+YA+ G +G+++ + M D
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTV 475
Query: 600 MWFSVLRGCIAHGNRTIG 617
W +V+ C+ G+ G
Sbjct: 476 TWNTVISACVRFGDFATG 493
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 30/237 (12%)
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
++++HA +G+ + L+D YS + P + F
Sbjct: 23 LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR------------------- 63
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
R+ AK ++ WNSI+ +KN EA++ + ++ + DK++F SV
Sbjct: 64 --RVSPAKNVY---------LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSV 112
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
I ACA E+G+ V+ + + +G E D + +LVD Y + G + R+VFD M D
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNL 552
VSWN+++ GY+++GY EAL ++ E++ S + P + T ++VL A + +V++G+ L
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 438 ACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVS 497
A +S S L ++ I++GL+ S L+D Y VF + V
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 498 -WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
WN+I+ ++ NG EAL + ++R S V P TF +V+ AC E G +++ +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ ++ + +VD+Y+R G L A + +EMP + D W S++ G +HG
Sbjct: 133 -LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHG 186
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/564 (30%), Positives = 291/564 (51%), Gaps = 37/564 (6%)
Query: 108 GDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLA 167
G + A+ LF +P + +VWN +I G+SK + + L+ M E V D+
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNML---KEGVTPDSHTFP 138
Query: 168 TVL-GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV 226
+L G D AL CGK++H V+ G L + + ++LVK Y CG +D A
Sbjct: 139 FLLNGLKRDGGALACGKKLHCHVVKFG--LGSNLYVQNALVKMYSLCGLMDMA------- 189
Query: 227 KEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFK 286
R VFD R + WN +ISGY E E++ L
Sbjct: 190 ------------------------RGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLV 225
Query: 287 RMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
M R+ VS T+ +LSA + +L K++H + + + + +AL++AY+
Sbjct: 226 EMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 347 GPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAK 406
A + F +KA D I +++ Y G ++ A+ FD M + ISW ++ G +
Sbjct: 286 EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLR 345
Query: 407 NACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHII 466
C +E+++IF M + D+F+ SV++ACA LE+GE + ++ D ++
Sbjct: 346 AGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVV 405
Query: 467 STSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGV 526
+L+D Y KCG E +KVF M + D+ +W +++G A NG G EA+ +F +M+ +
Sbjct: 406 GNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSI 465
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
+P IT+ VLSAC+H+G+V++ R F M+ ++ I P + HY CMVD+ RAG + EA
Sbjct: 466 QPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAY 525
Query: 587 DLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE 646
+++ +MP ++ +W ++L H + + ++AA+KI++L+P+N Y L N+ A +
Sbjct: 526 EILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCK 585
Query: 647 DWEGSAQVRELMIDKNVQKIPGCS 670
W+ +VR ++D ++K PG S
Sbjct: 586 RWKDLREVRRKIVDVAIKKTPGFS 609
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 234/545 (42%), Gaps = 91/545 (16%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRR--GCLDDATQLFDEMPQTNAF 64
G+ +T + +QLH + G+ + T +L F+ R G + A +LF ++P+ +
Sbjct: 42 GVCKTTDQFKQLHSQSITRGVAPNP-TFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVV 100
Query: 65 SWNTLIEAHLHSGHRNESLRLF------------HAMP----------------EKTH-- 94
WN +I+ E +RL+ H P +K H
Sbjct: 101 VWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCH 160
Query: 95 ----------YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKA 144
Y N LV ++ G + +A +FD ++ WN +I GY++ ++
Sbjct: 161 VVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEES 220
Query: 145 LSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCS 204
+ L M + +V + L VL AC+ + K+VH V + E L +
Sbjct: 221 IELLVEMERN---LVSPTSVTLLLVLSACSKVKDKDLCKRVHE--YVSECKTEPSLRLEN 275
Query: 205 SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL 264
+LV Y CG++D A R+ +K D S +++V GY G ++ AR FD + +
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHAC 324
W +I GY+ G E+L +F+ M+ G+ D T+ ++L+A L +E+ + + +
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKW 384
K + +D+VV +AL+D Y K CG E A+
Sbjct: 396 KNKIKNDVVVGNALIDMYFK-------------------------------CGCSEKAQK 424
Query: 385 IFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
+F M + +W +++VGLA N EAI +F +M + ++ D ++ V+SAC
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYC------KCGFVEIGRKVFDGM-IKTDEVS 497
++ + F K + DH I SLV + C + G V+ ++ M + + +
Sbjct: 485 VDQARKFFAK-----MRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIV 539
Query: 498 WNTIL 502
W +L
Sbjct: 540 WGALL 544
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 162/327 (49%), Gaps = 20/327 (6%)
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
N L+ A+ G + ++R+F +M + SW +V + + G+L+LA + FD MP ++ +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
W +I GY + G ++L +F+ M M+ D + +VL ACA +L G+ +
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQ--SAGMIP-DEFTMVSVLTACAHLGSLEIGEWI- 390
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
+ ++ +++ D V+ ++L+ Y KCG + A +V + + D F+ +A+V G AN G+
Sbjct: 391 -KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 247 MREARRVF----DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVAN 302
+EA +VF D + + + ++S +G +A F +MR D +
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR-----SDHRIEPS 504
Query: 303 ILSAGCSLLVV---ELVKQMHAHACKIGVTHDIVVASALLDA---YSKSQGPHEACKFFG 356
++ GC + ++ LVK+ + K+ + + +V ALL A ++ A K
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKIL 564
Query: 357 ELKAYDTILLNTMITVYSNCGRIEDAK 383
EL+ + + + +Y+ C R +D +
Sbjct: 565 ELEPDNGAVYALLCNIYAGCKRWKDLR 591
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 244/445 (54%), Gaps = 32/445 (7%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D F ++L+SGY+++G A R+FD D+ V W ++I G+V NG EA+ F M+
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTHDIVVASALLDAYSKSQGP 348
+ GV+ + TV ++L A + V + +H + G V D+ + S+L+D Y K
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK---- 252
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
C +DA+ +FD M S+ +++W +++ G ++
Sbjct: 253 ---------------------------CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSR 285
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIST 468
C + + +F M D+ ++ + +SV+SACA L G +V I +E + T
Sbjct: 286 CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGT 345
Query: 469 SLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRP 528
+L+D Y KCG +E VF+ + + + +W ++ G+A +GY +A LF M S V P
Sbjct: 346 TLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSP 405
Query: 529 SAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDL 588
+ +TF AVLSAC H GLVEEGR LF +MK +N+ P+ +HY+CMVDL+ R G L EA L
Sbjct: 406 NEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
Query: 589 IEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDW 648
IE MP + +W ++ C+ H + +GK AA ++I+L P + G Y L+N+ + S++W
Sbjct: 466 IERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNW 525
Query: 649 EGSAQVRELMIDKNVQKIPGCSWAD 673
+ A+VR+ M D+ V K PG SW +
Sbjct: 526 DEVARVRKQMKDQQVVKSPGFSWIE 550
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 171/414 (41%), Gaps = 82/414 (19%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N L+S ++ SG A LFD K+ + W +I G+ + G +A+ F M
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTG-- 199
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC-----SSLVKFYGK 212
V + + +VL A + G+ VH G+ LE +V C SSLV YGK
Sbjct: 200 -VAANEMTVVSVLKAAGKVEDVRFGRSVH------GLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
C D A ++VFD + V W ++I+GY
Sbjct: 253 CSCYDDA-------------------------------QKVFDEMPSRNVVTWTALIAGY 281
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
V + + + +F+ M + V+ + T++++LSA + + +++H + K + +
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
+ L+D Y K CG +E+A +F+ + K
Sbjct: 342 TAGTTLIDLYVK-------------------------------CGCLEEAILVFERLHEK 370
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+ +W +++ G A + +A D+F M + ++ +F +V+SACA +E G ++F
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 453 ---GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+ + DH +VD + + G +E + + + M ++ V W +
Sbjct: 431 LSMKGRFNMEPKADHY--ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 51/251 (20%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
+R GR +H +L+TG + + + L+ Y + C DDA ++FDEMP N +W LI
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 72 AHLHSGHRNESLRLFHAM-------PEKTHYS---------------------------- 96
++ S ++ + +F M EKT S
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 97 ----WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM- 151
L+ + K G L+ A +F+ + KN W +I+G++ G+ R A LF TM
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 152 --SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSSLVK 208
+ P E+ VL ACA + G+++ + +E + D C +V
Sbjct: 400 SSHVSPNEV------TFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYAC--MVD 451
Query: 209 FYGKCGDLDSA 219
+G+ G L+ A
Sbjct: 452 LFGRKGLLEEA 462
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L GR++H +K I + T L+ Y + GCL++A +F+ + + N ++W +I
Sbjct: 322 LHRGRRVHCYMIKNSI-EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWN-----MLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
G+ ++ LF+ M +H S N ++SA A G ++ LF SM + +
Sbjct: 381 GFAAHGYARDAFDLFYTMLS-SHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNM 439
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
+ ++ + ++G +A +L + M ++P + V + G+C
Sbjct: 440 EPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV------VWGALFGSCLLHKDYEL 493
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
GK +RVI L ++L Y + + D ARV +K+
Sbjct: 494 GKYAASRVIKLQPSHSGRYTLLANL---YSESQNWDEVARVRKQMKD 537
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 240/439 (54%), Gaps = 32/439 (7%)
Query: 235 SALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
+ L++ YA G + EAR+VF+ + V W ++ISGY + +AL F +M R G S
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 295 GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
+ T+++++ A + Q+H K G ++ V SALLD
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD-------------- 204
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
+Y+ G ++DA+ +FD + S+ +SWN+++ G A+ + +A+
Sbjct: 205 -----------------LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 415 DIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
++F M + FS+AS+ AC+S LE G+ V I G + +L+D Y
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
K G + RK+FD + K D VSWN++L YA +G+G EA+ F EMR G+RP+ I+F
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPF 594
+VL+AC H+GL++EG + ++ MK + I PE HY +VDL RAG L A+ IEEMP
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 595 QADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQV 654
+ A +W ++L C H N +G AAE + +LDP++PG ++ L N+ A+ W +A+V
Sbjct: 427 EPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARV 486
Query: 655 RELMIDKNVQKIPGCSWAD 673
R+ M + V+K P CSW +
Sbjct: 487 RKKMKESGVKKEPACSWVE 505
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 140/256 (54%), Gaps = 10/256 (3%)
Query: 361 YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
+D ++ NT++ +Y+ CG +E+A+ +F+ M + ++W +++ G +++ P +A+ F +M
Sbjct: 93 HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
++F+ +SVI A A++ G Q+ G + G + + + ++L+D Y + G +
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
+ + VFD + ++VSWN ++ G+A +AL LF+ M G RPS ++ ++ AC
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 541 DHTGLVEEGRNLFDTMKHNYNINPEIEHYS----CMVDLYARAGCLGEAIDLIEEMPFQA 596
TG +E+G+ + H Y I + + ++D+YA++G + +A + + + +
Sbjct: 273 SSTGFLEQGKWV-----HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KR 326
Query: 597 DANMWFSVLRGCIAHG 612
D W S+L HG
Sbjct: 327 DVVSWNSLLTAYAQHG 342
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 205/503 (40%), Gaps = 119/503 (23%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLD 154
N L++ +AK G L+ A +F+ MP ++ + W T+I GYS+ P AL F M
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
P E L++V+ A A CG Q+H F KCG
Sbjct: 159 PNEFT------LSSVIKAAAAERRGCCGHQLHG---------------------FCVKCG 191
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
DS V SAL+ Y G M +A+ VFD+ + V WN++I+G+
Sbjct: 192 -FDSNVHVG-----------SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVV 334
+AL LF+ M R G + A++ A S +E K +HA+ K G
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
+ LLD Y+KS H+A K F L D + N+++T Y+ G ++A W F+ M
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR--- 356
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
VG+ N + SF SV++AC+ L+ G
Sbjct: 357 -------VGIRPN---------------------EISFLSVLTACSHSGLLDEGWH---- 384
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTI----LMGYATNGY 510
+ E+ +K DG++ +W+ + L+G A G
Sbjct: 385 ------------------------YYELMKK--DGIVPE---AWHYVTVVDLLGRA--GD 413
Query: 511 GSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE-HY 569
+ AL EM + P+A + A+L+AC E G +H + ++P+ +
Sbjct: 414 LNRALRFIEEM---PIEPTAAIWKALLNACRMHKNTELGAY---AAEHVFELDPDDPGPH 467
Query: 570 SCMVDLYARAGCLGEAIDLIEEM 592
+ ++YA G +A + ++M
Sbjct: 468 VILYNIYASGGRWNDAARVRKKM 490
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 69/335 (20%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G QLH +K G +S++ + LL Y+R G +DDA +FD + N SWN LI H
Sbjct: 180 GHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 75 HSGHRNESLRLFHAMP----EKTHYSW--------------------------------- 97
++L LF M +H+S+
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 98 --NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---S 152
N L+ +AKSG + A +FD + ++ + WN+++ Y++ G ++A+ F+ M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
+ P E+ +VL AC+ L+ G + + +GI E + ++V G+
Sbjct: 359 IRPNEI------SFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV--TVVDLLGR 410
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE--------ARRVFDSRVDQCA-- 262
GDL+ A R ++E+ +A+ NA +M + A VF+ D
Sbjct: 411 AGDLNRALR---FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 263 -VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD 296
+L+N SG G +A + K+M+ GV +
Sbjct: 468 VILYNIYASG----GRWNDAARVRKKMKESGVKKE 498
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 415 DIFCRMNMLDLK-----MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
D+ R + DL+ D+ + +++ C L G V + D ++ +
Sbjct: 41 DLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNT 100
Query: 470 LVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS 529
L++ Y KCG +E RKVF+ M + D V+W T++ GY+ + +AL F +M G P+
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 530 AITFTAVLSACDHTGLVEEGRNLFDTMKHNY----NINPEIEHYSCMVDLYARAGCLGEA 585
T ++V+ A E R H + + + S ++DLY R G + +A
Sbjct: 161 EFTLSSVIKAA-----AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215
Query: 586 IDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAE 622
+ + + + D + W +++ G H R+ + A E
Sbjct: 216 QLVFDALESRNDVS-WNALIAG---HARRSGTEKALE 248
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 22/227 (9%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L +G+ +H +K+G + N LL Y++ G + DA ++FD + + + SWN+L+
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFA-GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 336
Query: 72 AHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV 127
A+ G E++ F M S+ +++A + SG L ++ M K+G+V
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIV 395
Query: 128 ---WN--TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCG 182
W+ T++ + G +AL + M ++P A + +L AC ++
Sbjct: 396 PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPT------AAIWKALLNAC----RMHKN 445
Query: 183 KQVHARVIVEGIELEFDKVLCSS-LVKFYGKCGDLDSAARVAGVVKE 228
++ A EL+ D L Y G + AARV +KE
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 273/569 (47%), Gaps = 69/569 (12%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
+V + K ++ A +FD MP K+ ++WNT+I GY K +++ +F+ + +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE--SCT 217
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D L +L A A+ L G Q+H+ G C S
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTG---------CYS-------------- 254
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
D+ L+ +S Y+ GK++ +F V +N++I GY NGE
Sbjct: 255 ----------HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+L+LFK + G ST+ +++ L+ L+ +H + K V++AL
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTAL- 360
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
TVYS IE A+ +FD K+L SWN+
Sbjct: 361 ------------------------------TTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
++ G +N +AI +F M + + + ++SACA L LG+ V +
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
E +ST+L+ Y KCG + R++FD M K +EV+WNT++ GY +G G EAL +F
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
EM SG+ P+ +TF VL AC H GLV+EG +F++M H Y P ++HY+CMVD+ RA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G L A+ IE M + +++W ++L C H + + + +EK+ +LDP+N G ++ LS
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 640 NVLATSEDWEGSAQVRELMIDKNVQKIPG 668
N+ + ++ +A VR+ + + K PG
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 226/520 (43%), Gaps = 82/520 (15%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF----KTMSLDP 155
L + G + A +F S+ + ++N ++ G+S P +LS+F K+ L P
Sbjct: 58 LTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKP 117
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
++ A + A + G+ +H + +V+G + E +L S++VK Y K
Sbjct: 118 ------NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSEL--LLGSNIVKMYFKFW- 168
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
++ +AR+VFD ++ +LWN++ISGY N
Sbjct: 169 ------------------------------RVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 276 GEEMEALALFKRMRRHGVSG-DVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTHDIV 333
+E++ +F+ + + D +T+ +IL A L + L Q+H+ A K G +HD V
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
L I++YS CG+I+ +F
Sbjct: 259 --------------------------------LTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
++++N+++ G N ++ +F + + ++ + S++ L L + G
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHG 343
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
+ +ST+L Y K +E RK+FD + SWN ++ GY NG +
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV 573
A++LFREM+ S P+ +T T +LSAC G + G+ + D ++ + + I + ++
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR-STDFESSIYVSTALI 462
Query: 574 DLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN 613
+YA+ G + EA L + M + + W +++ G HG
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVT-WNTMISGYGLHGQ 501
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 177/437 (40%), Gaps = 77/437 (17%)
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH-G 292
L+ L ++ G + AR +F S L+N ++ G+ +N +L++F +R+
Sbjct: 55 LTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTD 114
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
+ + ST A +SA + +H A G ++++ S ++ Y
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMY---------F 165
Query: 353 KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
KF+ R+EDA+ +FD M K I WN+++ G KN E
Sbjct: 166 KFW----------------------RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 203
Query: 413 AIDIFCRM-NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLV 471
+I +F + N ++D + ++ A A L LG Q+ A G + T +
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
Y KCG +++G +F K D V++N ++ GY +NG +L+LF+E+ SG R +
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323
Query: 532 TFTAVLSACDHTGL--------------------------------VEEGRNLFDTMKHN 559
T +++ H L +E R LFD
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE---- 379
Query: 560 YNINPE--IEHYSCMVDLYARAGCLGEAIDLIEEM---PFQADANMWFSVLRGCIAHGNR 614
+PE + ++ M+ Y + G +AI L EM F + +L C G
Sbjct: 380 ---SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 615 TIGKMAAEKIIQLDPEN 631
++GK + + D E+
Sbjct: 437 SLGKWVHDLVRSTDFES 453
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 42/279 (15%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
LR G Q+H KTG + + YS+ G + + LF E + + ++N +I
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 72 AHLHSGHRNESLRLFHAM----------------PEKTH----YSWN------------- 98
+ +G SL LF + P H Y+ +
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHAS 355
Query: 99 ---MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
L + ++K +++ A LFD P K+ WN +I GY++ G A+SLF+ M
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
+ + +L ACA AL+ GK VH +V + E + ++L+ Y KCG
Sbjct: 416 FS---PNPVTITCILSACAQLGALSLGKWVHD--LVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
+ A R+ ++ + ++ + + ++SGY G+ +EA +F
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
D LL + S+ G I A+ IF ++ + +N ++ G + N P ++ +F +
Sbjct: 51 DISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLR 110
Query: 422 M-LDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
DLK + ++A ISA + G + G+A+ G + + ++ +++V Y K V
Sbjct: 111 KSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRV 170
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM 521
E RKVFD M + D + WNT++ GY N E++ +FR++
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 65/252 (25%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G L +FL ++++LTT YS+ ++ A +LFDE P+ + SWN +I +
Sbjct: 343 GYCLKSNFLSHASVSTALTTV------YSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 75 HSGHRNESLRLFHAMPEKTHYSWN------------------------------------ 98
+G +++ LF M +K+ +S N
Sbjct: 397 QNGLTEDAISLFREM-QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 99 ----MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
L+ +AK G + A LFD M KN + WNT+I GY G ++AL++F M
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM--- 512
Query: 155 PLEMVHCDAGVLAT------VLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSSLV 207
++G+ T VL AC+ + G ++ +I G E C +V
Sbjct: 513 ------LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC--MV 564
Query: 208 KFYGKCGDLDSA 219
G+ G L A
Sbjct: 565 DILGRAGHLQRA 576
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+ +H +++ SS+ + L+ Y++ G + +A +LFD M + N +WNT+I +
Sbjct: 439 GKWVH-DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 75 HSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV--- 127
G E+L +F+ M T ++ ++ A + +G ++ +F+SM + G
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 128 --WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQV 185
+ ++ + GH ++AL + MS++P + V T+LGAC N + V
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEP------GSSVWETLLGACRIHKDTNLARTV 611
Query: 186 HARVIVEGIELEFDKV 201
++ EL+ D V
Sbjct: 612 SEKL----FELDPDNV 623
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 208/713 (29%), Positives = 335/713 (46%), Gaps = 96/713 (13%)
Query: 8 IGRTLREGRQLHVSFL-----KTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
I R L EG +H L + G +N + LL Y++ G LD+A LF+ MP+ N
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRGSINR-VVYWTSLLSKYAKTGYLDEARVLFEVMPERN 107
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPC 122
+ N ++ ++ NE+ LF MP K SW ++++A G + A LFD MP
Sbjct: 108 IVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 123 KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCG 182
+N + WNT++ G + G KA +F M
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMP------------------------------ 196
Query: 183 KQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYA 242
D V ++++K Y + ++ A + G + E + + +++V GY
Sbjct: 197 --------------SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYC 242
Query: 243 NAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH--GVSGDVSTV 300
G +REA R+F ++ V W ++ISG+ N EAL LF M++ VS + T+
Sbjct: 243 RYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETL 302
Query: 301 ANILSAGCSLLVVE---LVKQMHAHACKIG---VTHDIVVASALLDAYS----------- 343
+ L+ C L VE L +Q+HA G V HD +A +L+ Y+
Sbjct: 303 IS-LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 344 ------------------KSQGPHEACKFFGELKA-YDTILLNTMITVYSNCGRIEDAKW 384
K+ A F +K+ +D + +MI Y G + A
Sbjct: 362 LNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 385 IFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
+F + K ++W ++ GL +N +EA + M LK +++ ++S+ + S
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 445 LELGEQVFG--KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL 502
L+ G+ + T + D I+ SLV Y KCG +E ++F M++ D VSWN+++
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
MG + +G +AL LF+EM SG +P+++TF VLSAC H+GL+ G LF MK Y+I
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSI 601
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN----RTIGK 618
P I+HY M+DL RAG L EA + I +PF D ++ ++L C + I +
Sbjct: 602 QPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAE 661
Query: 619 MAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
AA ++++LDP N ++ L NV A + ++R+ M K V+K PGCSW
Sbjct: 662 RAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSW 714
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 252/441 (57%), Gaps = 33/441 (7%)
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV 293
L+ L++ Y+ G + AR+VFD +++ V WN++I Y N E EAL +F MR G
Sbjct: 99 LNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGF 158
Query: 294 SGDVSTVANILSA-GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
T++++LSA G + +E K++H + K + ++ V +ALLD Y+K
Sbjct: 159 KFSEFTISSVLSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAK-------- 209
Query: 353 KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
CG I+DA +F++M K+ ++W+S++ G +N E
Sbjct: 210 -----------------------CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
A+ ++ R + L+ ++F+ +SVI AC++ + L G+Q+ G + +++S VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y KCG + +F + + + WNTI+ G+A + E + LF +M+ G+ P+ +T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
F+++LS C HTGLVEEGR F M+ Y ++P + HYSCMVD+ RAG L EA +LI+ +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 593 PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSA 652
PF A++W S+L C + N + ++AAEK+ +L+PEN G ++ LSN+ A ++ WE A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 653 QVRELMIDKNVQKIPGCSWAD 673
+ R+L+ D +V+K+ G SW D
Sbjct: 487 KSRKLLRDCDVKKVRGKSWID 507
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 184/385 (47%), Gaps = 70/385 (18%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N+L++A++K G ++LA +FD M ++ + WNT+I Y++ +AL +F M + +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 158 MVHCDAGVLATVLGACA-DCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
+++VL AC +C AL C K++H + I+L + G
Sbjct: 160 F---SEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNL----------YVG----- 200
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
+AL+ YA G +++A +VF+S D+ +V W+S+++GYV N
Sbjct: 201 ------------------TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 277 EEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVAS 336
EAL L++R +R + + T+++++ A +L + KQMHA CK G ++ VAS
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 337 ALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS 396
+ +D Y+K CG + ++ IF + K L
Sbjct: 303 SAVDMYAK-------------------------------CGSLRESYIIFSEVQEKNLEL 331
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG-KA 455
WN+I+ G AK+A P E + +F +M + ++ +F+S++S C +E G + F
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFV 480
T GL + + + +VD + G +
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLL 416
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 148/284 (52%), Gaps = 6/284 (2%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
D LLN +I YS CG +E A+ +FD M ++L+SWN+++ +N SEA+DIF M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
K +F+ +SV+SAC +++ ++ ++ + + T+L+D Y KCG ++
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 482 IGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD 541
+VF+ M V+W++++ GY N EAL L+R + + + T ++V+ AC
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 542 HTGLVEEGRNLFDTM-KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM 600
+ + EG+ + + K + N + S VD+YA+ G L E+ + E+ + + +
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVA--SSAVDMYAKCGSLRESYIIFSEVQ-EKNLEL 331
Query: 601 WFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLAT 644
W +++ G H + EK +Q D +P + S++L+
Sbjct: 332 WNTIISGFAKHARPKEVMILFEK-MQQDGMHPNE-VTFSSLLSV 373
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
Query: 435 VISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTD 494
++ CA + + GK I + LE D + L++ Y KCGFVE+ R+VFDGM++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 495 EVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF- 553
VSWNT++ Y N SEAL +F EMR G + S T ++VLSAC E + L
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 554 DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN 613
++K ++N + + ++DLYA+ G + +A+ + E M ++ W S++ G + + N
Sbjct: 187 LSVKTCIDLNLYVG--TALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAGYVQNKN 243
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 45/329 (13%)
Query: 26 GILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN-AFSWNTLIEAHLHSGHRNESL- 83
G+L SL + N ++ Y+R +A +F EM FS T+ G ++L
Sbjct: 121 GMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE 180
Query: 84 -RLFHAMPEKTHYSWNM-----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSK 137
+ H + KT N+ L+ +AK G ++ A +F+SM K+ + W++++ GY +
Sbjct: 181 CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 138 RGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE 197
+ +AL L++ LE + L++V+ AC++ AL GKQ+HA + G
Sbjct: 241 NKNYEEALLLYRRAQRMSLEQ---NQFTLSSVICACSNLAALIEGKQMHAVICKSG--FG 295
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSR 257
+ + SS V Y KCG L RE+ +F
Sbjct: 296 SNVFVASSAVDMYAKCGSL-------------------------------RESYIIFSEV 324
Query: 258 VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA-GCSLLVVELV 316
++ LWN+IISG+ + E + LF++M++ G+ + T +++LS G + LV E
Sbjct: 325 QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKS 345
+ G++ ++V S ++D ++
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRA 413
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 46/246 (18%)
Query: 14 EGRQLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEA 72
E ++LH +KT I LN + TA LL Y++ G + DA Q+F+ M ++ +W++++
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTA--LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237
Query: 73 HLHSGHRNESLRLF----------------------------------HAMPEKTHYSWN 98
++ + + E+L L+ HA+ K+ + N
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 99 MLVSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
+ V++ +AK G L+ ++ +F + KN +WNTII G++K P++ + LF+ M
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
D + H + +++L C + G++ +++ L + V S +V G+
Sbjct: 358 DGM---HPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRA 413
Query: 214 GDLDSA 219
G L A
Sbjct: 414 GLLSEA 419
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 276/517 (53%), Gaps = 42/517 (8%)
Query: 163 AGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV 222
A +A L + A GK++HA +I G + + + + L+ + KCG L A
Sbjct: 34 AKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLN--ISIKLLILHLKCGCLSYA--- 88
Query: 223 AGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEAL 282
R+VFD +N +ISGY+ +G E L
Sbjct: 89 ----------------------------RQVFDELPKPTLSAYNYMISGYLKHGLVKELL 120
Query: 283 ALFKRMRRHGVSGDVSTVANILSAGCS-----LLVVELVKQMHAHACKIGVTHDIVVASA 337
L +RM G D T++ +L A S +L L + +HA K V D V+ +A
Sbjct: 121 LLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITA 180
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
L+D Y KS A F +K + + +MI+ Y N G +EDA+ IF+T K ++ +
Sbjct: 181 LVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVY 240
Query: 398 NSILVGLAKNA-CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
N+++ G +++ ++D++ M + +FASVI AC+ + E+G+QV + +
Sbjct: 241 NAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIM 300
Query: 457 TVGLEFDHI-ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
G+ + HI + +SL+D Y KCG + R+VFD M + + SW +++ GY NG EAL
Sbjct: 301 KSGV-YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEAL 359
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDL 575
LF M+ + P+ +TF LSAC H+GLV++G +F++M+ +Y++ P++EHY+C+VDL
Sbjct: 360 ELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDL 419
Query: 576 YARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN-PGA 634
RAG L +A + MP + D+++W ++L C HGN + +AA ++ +L+ + PGA
Sbjct: 420 MGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGA 479
Query: 635 YIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
Y+ LSNV A+++ W+ +++RE+M + + K G SW
Sbjct: 480 YLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 211/449 (46%), Gaps = 77/449 (17%)
Query: 106 KSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGV 165
K G L A +FD +P +N +I GY K G ++ L L + MS + D
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEK---ADGYT 137
Query: 166 LATVLGACAD-----CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
L+ VL A + + VHAR+I ++E D VL ++LV Y K G L+SA
Sbjct: 138 LSMVLKASNSRGSTMILPRSLCRLVHARII--KCDVELDDVLITALVDTYVKSGKLESAR 195
Query: 221 RVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEME 280
V +K+ + ++++SGY N G + +A +F++ + V++N+++ G+ +GE +
Sbjct: 196 TVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAK 255
Query: 281 -ALALFKRMRRHGVSGDVSTVANILSAGCSLLVV-ELVKQMHAHACKIGVTHDIVVASAL 338
++ ++ M+R G ++ST A+++ A CS+L E+ +Q+HA K GV I + S+L
Sbjct: 256 RSVDMYISMQRAGFHPNISTFASVIGA-CSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSL 314
Query: 339 LDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWN 398
LD Y+K CG I DA+ +FD M K + SW
Sbjct: 315 LDMYAK-------------------------------CGGINDARRVFDQMQEKNVFSWT 343
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV 458
S++ G KN P EA+++F RM ++ + +F +SAC+ ++ G ++F
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFE----- 398
Query: 459 GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLF 518
++ D+ + + + C + D LMG A G ++A
Sbjct: 399 SMQRDYSMKPKMEHYAC----------IVD-------------LMGRA--GDLNKAFEFA 433
Query: 519 REMRCSGVRPSAITFTAVLSACDHTGLVE 547
R M RP + + A+LS+C+ G VE
Sbjct: 434 RAM---PERPDSDIWAALLSSCNLHGNVE 459
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 150/355 (42%), Gaps = 80/355 (22%)
Query: 13 REGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEA 72
+ G+++H +KTG L + +LL + + GCL A Q+FDE+P+ ++N +I
Sbjct: 51 KAGKKIHADIIKTG-FQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 73 HLHSGHRNESLRLFHAMP---EKTH-YSWNM----------------------------- 99
+L G E L L M EK Y+ +M
Sbjct: 110 YLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKC 169
Query: 100 -----------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
LV + KSG L+ A ++F++M +N + ++I GY +G A +F
Sbjct: 170 DVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 149 KTMSLDPL----EMV-------------------------HCDAGVLATVLGACADCFAL 179
T + + MV H + A+V+GAC+ +
Sbjct: 230 NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSH 289
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVS 239
G+QVHA+++ G+ + SSL+ Y KCG ++ A RV ++E + FS ++++
Sbjct: 290 EVGQQVHAQIMKSGVYTHIK--MGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 240 GYANAGKMREARRVF----DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR 290
GY G EA +F + R++ V + +S +G + +F+ M+R
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQR 402
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 29/208 (13%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H +K+G+ + + + LL Y++ G ++DA ++FD+M + N FSW ++I+ +
Sbjct: 292 GQQVHAQIMKSGVY-THIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 75 HSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV--- 127
+G+ E+L LF M E + ++ +SA + SG + + +F+SM +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 128 --WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC------------ 173
+ I+ + G KA + M P D+ + A +L +C
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERP------DSDIWAALLSSCNLHGNVELASIA 464
Query: 174 -ADCFALNCGKQVHARVIVEGIELEFDK 200
++ F LN K+ A + + + DK
Sbjct: 465 ASELFKLNADKRPGAYLALSNVYASNDK 492
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 195/674 (28%), Positives = 318/674 (47%), Gaps = 112/674 (16%)
Query: 42 YSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAM--------PEKT 93
Y+ G + A +LF+EMPQ++ S+N +I ++ G ++++ +F M P+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 94 HY-------------------------SW--------NMLVSAFAKSGDLQLAHSLFDSM 120
Y SW N L++ + G +++A +FD M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 121 PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
++ + WNT+I GY + G+ AL +F M + +++ D + ++L C L
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDL---DHATIVSMLPVCGHLKDLE 235
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSG 240
G+ VH +VE L DK+ EV + ALV+
Sbjct: 236 MGRNVHK--LVEEKRLG-DKI--------------------------EVKN----ALVNM 262
Query: 241 YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTV 300
Y G+M EAR VFD + + W +I+GY +G+ AL L + M+ GV + T+
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 301 ANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA 360
A+++S L V K +H A + V DI++ ++L
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSL---------------------- 360
Query: 361 YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
I++Y+ C R++ +F S W++I+ G +N S+A+ +F RM
Sbjct: 361 ---------ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
D++ + + S++ A A+ + L + G +T LV Y KCG +
Sbjct: 412 RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL 471
Query: 481 EIGRKVFDGMIKT----DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
E K+F+G+ + D V W ++ GY +G G AL +F EM SGV P+ ITFT+
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSA 531
Query: 537 LSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
L+AC H+GLVEEG LF M +Y HY+C+VDL RAG L EA +LI +PF+
Sbjct: 532 LNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 597 DANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRE 656
+ +W ++L C+ H N +G+MAA K+ +L+PEN G Y+ L+N+ A W+ +VR
Sbjct: 592 TSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRS 651
Query: 657 LMIDKNVQKIPGCS 670
+M + ++K PG S
Sbjct: 652 MMENVGLRKKPGHS 665
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 5/272 (1%)
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD 424
+L+T+ Y+ CG I A+ +F+ M +L+S+N ++ + +AI +F RM
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEG 110
Query: 425 LK--MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEI 482
+K D +++ V A ++LG V G+ + D + +L+ Y G VE+
Sbjct: 111 VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEM 170
Query: 483 GRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
R VFD M D +SWNT++ GY NGY ++AL +F M V T ++L C H
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
+E GRN+ ++ + +IE + +V++Y + G + EA + + M + D W
Sbjct: 231 LKDLEMGRNVHKLVEEK-RLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWT 288
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA 634
++ G G+ + +++Q + P A
Sbjct: 289 CMINGYTEDGD-VENALELCRLMQFEGVRPNA 319
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/709 (26%), Positives = 334/709 (47%), Gaps = 92/709 (12%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRG-CLDDATQLFDEMPQTNAFSWNTLIEAH 73
G+ +H +K G+ +L N L+ Y++ G DA FD + + SWN +I
Sbjct: 141 GKSMHSYIIKAGLEKDTLV-GNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 74 LHSGHRNESLRLFHAM---PEKTHY--------------------------------SW- 97
+ ++ R F M P + +Y SW
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 98 -------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
N LVS + + G ++ A SLF M K+ + WN +I GY+ KA LF
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 151 M----SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
+ + P D+ + ++L CA L GK++H+ ++ LE D + ++L
Sbjct: 320 LVHKGDVSP------DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE-DTSVGNAL 372
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWN 266
+ FY + GD +A ++ D S WN
Sbjct: 373 ISFYARFGDTSAAYWAFSLMSTKDIIS-------------------------------WN 401
Query: 267 SIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
+I+ + + ++ + L L + ++ D T+ ++L ++ + VK++H ++ K
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 327 GVTHD---IVVASALLDAYSKSQGPHEACKFFGELKAYDTIL-LNTMITVYSNCGRIEDA 382
G+ HD + +ALLDAY+K A K F L T++ N++++ Y N G +DA
Sbjct: 462 GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDA 521
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
+ +F MS+ L +W+ ++ A++ CP+EAI +F + ++ + + +++ CA
Sbjct: 522 QMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQL 581
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL 502
+ L L Q G I GL D + +L+D Y KCG ++ VF + D V + ++
Sbjct: 582 ASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMV 640
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
GYA +G G EAL ++ M S ++P + T +L+AC H GL+++G ++D+++ + +
Sbjct: 641 AGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGM 700
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAE 622
P +E Y+C VDL AR G L +A + +MP + +AN+W ++LR C + +G A
Sbjct: 701 KPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVAN 760
Query: 623 KIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
++Q + ++ G ++ +SN+ A WEG ++R LM K ++K GCSW
Sbjct: 761 HLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSW 809
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/545 (20%), Positives = 224/545 (41%), Gaps = 90/545 (16%)
Query: 13 REGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEA 72
R GRQ+H ++ L + + N L+ FY R G +++A LF M + SWN +I
Sbjct: 244 RSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 73 HLHSGHRNESLRLFHAMPEKTHYS------------------------------------ 96
+ + ++ +LFH + K S
Sbjct: 304 YASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 97 -----WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
N L+S +A+ GD A+ F M K+ + WN I+ ++ K +
Sbjct: 364 EDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP---KQFQFLNLL 420
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEG-IELEFDKVLCSSLVKFY 210
E + D+ + ++L C + + K+VH + G + E + L ++L+ Y
Sbjct: 421 HHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 211 GKCGDLDSAARV-AGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
KCG+++ A ++ G+ + S ++L+SGY N+G +A+ +F W+ ++
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMV 540
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
Y + EA+ +F+ ++ G+ + T+ N+L L + LV+Q H + + G+
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG 600
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
DI + LLD Y+K CG ++ A +F +
Sbjct: 601 -DIRLKGTLLDVYAK-------------------------------CGSLKHAYSVFQSD 628
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGE 449
+ + L+ + +++ G A + EA+ I+ M ++K D ++++AC ++ G
Sbjct: 629 ARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGL 688
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-------IKTDEVSWNTIL 502
Q++ TV H + ++ + C + G ++ D ++ + W T+L
Sbjct: 689 QIYDSIRTV-----HGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
Query: 503 MGYAT 507
T
Sbjct: 744 RACTT 748
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 43/386 (11%)
Query: 206 LVKFYGKCGDLDSAARVAGVVKEVDDFSLS----ALVSGYANAGKMREARRVFDSRVDQC 261
+VK DL S + G V ++ + S ++++ YA +M + +++F
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV-KQMH 320
V+WN +++G ++ E + FK M S I+ C L K MH
Sbjct: 87 PVVWNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIE 380
++ K G+ D +V +AL+ Y+K FG +
Sbjct: 146 SYIIKAGLEKDTLVGNALVSMYAK----------FGFI--------------------FP 175
Query: 381 DAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA 440
DA FD ++ K ++SWN+I+ G ++N ++A FC M + + + A+V+ CA
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Query: 441 SKS---CLELGEQVFGKAITVGLEFDHI-ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
S G Q+ + H+ + SLV FY + G +E +F M D V
Sbjct: 236 SMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSG-VRPSAITFTAVLSACDHTGLVEEGRNLFD- 554
SWN ++ GYA+N +A LF + G V P ++T ++L C + G+ +
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 555 TMKHNYNINPEIEHYSCMVDLYARAG 580
++H+Y + + + ++ YAR G
Sbjct: 356 ILRHSYLLE-DTSVGNALISFYARFG 380
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 17/250 (6%)
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD-LK 426
+++ +Y+ C R++D + +F M S + WN +L GL+ +C E + F M+ D K
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPK 119
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKA-----ITVGLEFDHIISTSLVDFYCKCGFV- 480
+FA V+ C+ LG+ GK+ I GLE D ++ +LV Y K GF+
Sbjct: 120 PSSVTFAIVLPL-----CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIF 174
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
FDG+ D VSWN I+ G++ N ++A F M P+ T VL C
Sbjct: 175 PDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Query: 541 ---DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQAD 597
D GR + + + + + +V Y R G + EA L M D
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKD 293
Query: 598 ANMWFSVLRG 607
W V+ G
Sbjct: 294 LVSWNVVIAG 303
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 21/224 (9%)
Query: 428 DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF 487
D F V+ ACAS S L G + G +G +S S+++ Y KC ++ +K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 488 DGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG-VRPSAITFTAVLSACDHTGLV 546
M D V WN +L G + + G E + F+ M + +PS++TF VL C G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 547 EEGRNLFDTMKHNYNINPEIEHYS----CMVDLYARAGCLGE----AIDLIEEMPFQADA 598
G+++ H+Y I +E + +V +YA+ G + A D I + D
Sbjct: 139 YNGKSM-----HSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD----KDV 189
Query: 599 NMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVL 642
W +++ G + N + ++ +P P Y ++NVL
Sbjct: 190 VSWNAIIAG-FSENNMMADAFRSFCLMLKEPTEPN-YATIANVL 231
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/668 (28%), Positives = 307/668 (45%), Gaps = 112/668 (16%)
Query: 46 GCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH----------- 94
G L A Q+FD+MP + SW ++I+ ++ + + +E+L LF AM H
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 95 ------------------------------YSWNMLVSAFAKSGDLQLAHSLFDSMPCKN 124
Y + L+ + + G + + +F MP +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 125 GLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
+ W II G G ++ L+ F MS E+ D A L ACA + GK
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSE-EL--SDTYTFAIALKACAGLRQVKYGKA 230
Query: 185 VHARVIVEGIELEFDKVLC--SSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYA 242
+H VIV G F LC +SL Y +CG+
Sbjct: 231 IHTHVIVRG----FVTTLCVANSLATMYTECGE--------------------------- 259
Query: 243 NAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVAN 302
M++ +F++ ++ V W S+I Y G+E++A+ F +MR V + T A+
Sbjct: 260 ----MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFAS 315
Query: 303 ILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYD 362
+ SA SL + +Q+H + +G+ + V+
Sbjct: 316 MFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS--------------------------- 348
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNM 422
N+M+ +YS CG + A +F M + +ISW++I+ G + E F M
Sbjct: 349 ----NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Query: 423 LDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEI 482
K F+ AS++S + + +E G QV A+ GLE + + +SL++ Y KCG ++
Sbjct: 405 SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKE 464
Query: 483 GRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
+F + D VS ++ GYA +G EA+ LF + G RP ++TF +VL+AC H
Sbjct: 465 ASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTH 524
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
+G ++ G + F+ M+ YN+ P EHY CMVDL RAG L +A +I EM ++ D +W
Sbjct: 525 SGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWT 584
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
++L C A G+ G+ AAE+I++LDP A + L+N+ +++ + E +A VR+ M K
Sbjct: 585 TLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKG 644
Query: 663 VQKIPGCS 670
V K PG S
Sbjct: 645 VIKEPGWS 652
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 149/604 (24%), Positives = 238/604 (39%), Gaps = 120/604 (19%)
Query: 1 MSMELQGIGRT--LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEM 58
+S+ L+ G++ + G LH +KT +L SS+ + LL Y R G +D + ++F EM
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLL-SSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 59 PQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYS---------------------- 96
P NA +W +I +H+G E L F M S
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 97 -----------------WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRG 139
N L + + + G++Q LF++M ++ + W ++I Y + G
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 140 HPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFD 199
KA+ F M V + A++ ACA L G+Q+H V+ G+
Sbjct: 290 QEVKAVETFIKMRNS---QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 200 KVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVD 259
+ +S++K Y CG+L SA+ + ++ D S S ++ GY AG
Sbjct: 347 --VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG-------------- 390
Query: 260 QCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQM 319
GE E F MR+ G +A++LS ++ V+E +Q+
Sbjct: 391 ---------------FGE--EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 320 HAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRI 379
HA A G+ + V S+L++ YSK EA FGE D + L MI Y+ G+
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGK- 492
Query: 380 EDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISAC 439
EAID+F + + + D +F SV++AC
Sbjct: 493 ------------------------------SKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 440 ASKSCLELGEQVFGKAI-TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI-KTDEVS 497
L+LG F T + +VD C+ G + K+ + M K D+V
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 498 WNTILMGYATNG---YGSEALTLFREMRCSGVRPSAITFTAVLSAC-DHTGLVEEGRNLF 553
W T+L+ G G A E+ P+ T L+ TG +EE N+
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILEL-----DPTCATALVTLANIYSSTGNLEEAANVR 637
Query: 554 DTMK 557
MK
Sbjct: 638 KNMK 641
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 163/367 (44%), Gaps = 35/367 (9%)
Query: 243 NAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR--RHGVSGDVSTV 300
NAG +R AR+VFD V W SII YV EAL LF MR H VS D S +
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 301 ANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA 360
+ +L A + + +HA+A K + + V S+LLD Y +
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR---------------- 155
Query: 361 YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
G+I+ + +F M + ++W +I+ GL E + F M
Sbjct: 156 ---------------VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM 200
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
+ + D ++FA + ACA ++ G+ + I G ++ SL Y +CG +
Sbjct: 201 SRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEM 260
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
+ G +F+ M + D VSW ++++ Y G +A+ F +MR S V P+ TF ++ SAC
Sbjct: 261 QDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
Query: 541 DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM 600
+ G L + + +N + + M+ +Y+ G L A L + M + D
Sbjct: 321 ASLSRLVWGEQLHCNVL-SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIIS 378
Query: 601 WFSVLRG 607
W +++ G
Sbjct: 379 WSTIIGG 385
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 190/656 (28%), Positives = 307/656 (46%), Gaps = 125/656 (19%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCK--NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
L +A +++LA +FD +P N + W+ +I Y+ KAL L+ M
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM------ 94
Query: 158 MVHCDAGVLAT------VLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
++GV T VL ACA A++ GK +H+ V
Sbjct: 95 ---LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHV---------------------- 129
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
C D + D + +ALV YA G++ A +VFD + V WN++ISG
Sbjct: 130 NCSDFAT-----------DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISG 178
Query: 272 YVLNGEEMEALALFKRMRR-HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
+ L+ + + LF MRR G+S ++ST+ + A + K +H + ++G ++
Sbjct: 179 FSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 331 DIVVA-------------------------------SALLDAYSKSQGPHEA-------- 351
D+VV SA++ Y +++ EA
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 352 -------------------CKFFGELKA--------------YDTILLNTMITVYSNCGR 378
C FG+L D + NT+I+ Y+ G
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 379 IEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISA 438
+ DA F + K +IS+NS++ G N P E+ +F M ++ D + V++A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 439 CASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSW 498
C+ + L G G + G + I +L+D Y KCG +++ ++VFD M K D VSW
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSW 478
Query: 499 NTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM-K 557
NT+L G+ +G G EAL+LF M+ +GV P +T A+LSAC H+GLV+EG+ LF++M +
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Query: 558 HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIG 617
++N+ P I+HY+CM DL ARAG L EA D + +MPF+ D + ++L C + N +G
Sbjct: 539 GDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELG 598
Query: 618 KMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
++K+ L E + + LSN + +E WE +A++R + + + K PG SW D
Sbjct: 599 NEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 141/272 (51%), Gaps = 17/272 (6%)
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSKTL--ISWNSILVGLAKNACPSEAIDIFCRM 420
T+L+N + +Y++C +E A+ +FD + + I+W+ ++ A N +A+D++ +M
Sbjct: 36 TVLVN-LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM 94
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
++ K+++ V+ ACA ++ G+ + D + T+LVDFY KCG +
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGEL 154
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM-RCSGVRPSAITFTAVLSA 539
E+ KVFD M K D V+WN ++ G++ + ++ + LF +M R G+ P+ T + A
Sbjct: 155 EMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPA 214
Query: 540 CDHTGLVEEGRNLFDTMKHNY----NINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQ 595
G + EG+ + H Y + ++ + ++D+YA++ C+ A + ++ F+
Sbjct: 215 LGRAGALREGKAV-----HGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFK 268
Query: 596 ADANMWFSVLRGCIAHGNRTIGKMAAEKIIQL 627
+ W +++ G + N I K A E Q+
Sbjct: 269 KNEVTWSAMIGGYVE--NEMI-KEAGEVFFQM 297
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 141/358 (39%), Gaps = 80/358 (22%)
Query: 5 LQGIGRT--LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
+GR LREG+ +H + G N L +L Y++ C+ A ++FD + N
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSND-LVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSW------------------------- 97
+W+ +I ++ + E+ +F M + +
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 98 ----------------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHP 141
N ++S +AK G L A F + K+ + +N++I G P
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 142 RKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
++ LF M + D L VL AC+ AL G H +V G + +
Sbjct: 391 EESFRLFHEMRTSG---IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAV--NTS 445
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC 261
+C++L+ Y KCG LD A R VFD+ +
Sbjct: 446 ICNALMDMYTKCGKLDVAKR-------------------------------VFDTMHKRD 474
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQM 319
V WN+++ G+ ++G EAL+LF M+ GV+ D T+ ILSA +V+ KQ+
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQL 532
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 16/148 (10%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPE---- 91
N L+ Y++ G LD A ++FD M + + SWNT++ G E+L LF++M E
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Query: 92 KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV------WNTIIHGYSKRGHPRKAL 145
+ ++SA + SG + LF+SM + V +N + ++ G+ +A
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY 567
Query: 146 SLFKTMSLDPLEMVHCDAGVLATVLGAC 173
M +P D VL T+L AC
Sbjct: 568 DFVNKMPFEP------DIRVLGTLLSAC 589
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 237/431 (54%), Gaps = 36/431 (8%)
Query: 247 MREARRVFDSRVDQC--AVLWNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTVANI 303
M A +VF S++++ +WN++I GY G + A +L++ MR G V D T +
Sbjct: 69 MSYAHKVF-SKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 304 LSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT 363
+ A ++ V L + +H+ + G FG L
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSG---------------------------FGSL----I 156
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
+ N+++ +Y+NCG + A +FD M K L++WNS++ G A+N P EA+ ++ MN
Sbjct: 157 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 216
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
+K D F+ S++SACA L LG++V I VGL + S L+D Y +CG VE
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS-GVRPSAITFTAVLSACDH 542
+ +FD M+ + VSW ++++G A NG+G EA+ LF+ M + G+ P ITF +L AC H
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
G+V+EG F M+ Y I P IEH+ CMVDL ARAG + +A + I+ MP Q + +W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
++L C HG+ + + A +I+QL+P + G Y+ LSN+ A+ + W ++R+ M+
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 663 VQKIPGCSWAD 673
V+K+PG S +
Sbjct: 457 VKKVPGHSLVE 467
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 190/426 (44%), Gaps = 76/426 (17%)
Query: 110 LQLAHSLFDSMPCK-NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLAT 168
+ AH +F + N +WNT+I GY++ G+ A SL++ M + L V D
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL--VEPDTHTYPF 126
Query: 169 VLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
++ A + G+ +H+ VI G SL+
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGF---------GSLI--------------------- 156
Query: 229 VDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
+ ++L+ YAN G + A +VFD ++ V WNS+I+G+ NG+ EALAL+ M
Sbjct: 157 ---YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 289 RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
G+ D T+ ++LSA + + L K++H + K+G+T ++ ++ LLD Y++
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR---- 269
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
CGR+E+AK +FD M K +SW S++VGLA N
Sbjct: 270 ---------------------------CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 409 CPSEAIDIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQVFGK---AITVGLEFDH 464
EAI++F M + L + +F ++ AC+ ++ G + F + + +H
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 465 IISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNGYGSEALTLFREMRC 523
+VD + G V+ + M ++ + V W T+L A +G L F ++
Sbjct: 363 F--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG--ACTVHGDSDLAEFARIQI 418
Query: 524 SGVRPS 529
+ P+
Sbjct: 419 LQLEPN 424
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 133/318 (41%), Gaps = 82/318 (25%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFY----SRRGCLDDATQLFDEMPQT-NAFSWNTLI 70
RQ+H ++ G+ S L+ FY + A ++F ++ + N F WNTLI
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 71 EAHLHSGHRNESLRLF-------------HAMP---------------EKTH-------- 94
+ G+ + L+ H P E H
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 95 ----YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
Y N L+ +A GD+ A+ +FD MP K+ + WN++I+G+++ G P +AL+L+
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M+ ++ D + ++L ACA AL GK+VH +I G+
Sbjct: 213 MNSKGIK---PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH----------- 258
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
S + L+ YA G++ EA+ +FD VD+ +V W S+I
Sbjct: 259 ----------------------SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 271 GYVLNGEEMEALALFKRM 288
G +NG EA+ LFK M
Sbjct: 297 GLAVNGFGKEAIELFKYM 314
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 53/252 (21%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
+R G +H +++G S + N LL Y+ G + A ++FD+MP+ + +WN++I
Sbjct: 137 VRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 72 AHLHSGHRNESLRLFHAMPEK---------------------------TH---------- 94
+G E+L L+ M K H
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 95 --YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
+S N+L+ +A+ G ++ A +LFD M KN + W ++I G + G ++A+ LFK M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 153 ----LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSSLV 207
L P E+ +L AC+ C + G + R+ E IE + C +V
Sbjct: 316 STEGLLPCEI------TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC--MV 367
Query: 208 KFYGKCGDLDSA 219
+ G + A
Sbjct: 368 DLLARAGQVKKA 379
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 190/639 (29%), Positives = 305/639 (47%), Gaps = 78/639 (12%)
Query: 43 SRRGCLDDATQLFDEMPQ----TNAFSWNTLIEA--HLHSGHRNESL--RLFHAMPEKTH 94
S+ L++A + EM + +++S+ L EA L S L R+ + +
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM--S 152
N ++ + + L+ A LFD M N + T+I Y+++G KA+ LF M S
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
D + + T+L + + AL+ G+Q+HA VI G LCS+ G
Sbjct: 179 GDKPP-----SSMYTTLLKSLVNPRALDFGRQIHAHVIRAG--------LCSNTSIETG- 224
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
+V+ Y G + A+RVFD + V ++ GY
Sbjct: 225 ------------------------IVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGY 260
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
G +AL LF + GV D + +L A SL + L KQ+HA K+G+ ++
Sbjct: 261 TQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEV 320
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
V + L+D Y K AC+ F E++ + + + +I+ Y + E+A F ++ SK
Sbjct: 321 SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK 380
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
NS F++ S+ AC+ + +G QV
Sbjct: 381 NASILNS------------------------------FTYTSIFQACSVLADCNIGGQVH 410
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGS 512
AI L ++L+ Y KCG ++ +VF+ M D V+W + G+A G S
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
EAL LF +M G++P+++TF AVL+AC H GLVE+G++ DTM YN+ P I+HY CM
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530
Query: 573 VDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENP 632
+D+YAR+G L EA+ ++ MPF+ DA W L GC H N +G++A E++ QLDPE+
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDT 590
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
Y+ N+ + WE +A++ +LM ++ ++K CSW
Sbjct: 591 AGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSW 629
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 234/542 (43%), Gaps = 112/542 (20%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R+L GR LH ++ GI N S+ N +LQ Y L+DA +LFDEM + NA S T+
Sbjct: 97 RSLSHGRLLH-DRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTM 155
Query: 70 IEAHLHSGHRNESLRLFHAM------PEKTHYSWNM------------------------ 99
I A+ G ++++ LF M P + Y+ +
Sbjct: 156 ISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL 215
Query: 100 ---------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
+V+ + K G L A +FD M K + ++ GY++ G R AL LF
Sbjct: 216 CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVD 275
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
+ + +E D+ V + VL ACA LN GKQ+HA V G+E E + + LV FY
Sbjct: 276 LVTEGVEW---DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS--VGTPLVDFY 330
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
KC +SA R ++E +D S SA++SGY + EA + F S + A + NS
Sbjct: 331 IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF-- 388
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
T +I A CS+L C IG
Sbjct: 389 ----------------------------TYTSIFQA-CSVLA----------DCNIGGQ- 408
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
V A A+ + SQ +GE + +IT+YS CG ++DA +F++M
Sbjct: 409 --VHADAIKRSLIGSQ--------YGE---------SALITMYSKCGCLDDANEVFESMD 449
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
+ +++W + + G A SEA+ +F +M +K + +F +V++AC+ +E G+
Sbjct: 450 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 451 VFG---KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYA 506
+ V DH ++D Y + G ++ K M + D +SW L G
Sbjct: 510 CLDTMLRKYNVAPTIDHY--DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 507 TN 508
T+
Sbjct: 568 TH 569
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 267/481 (55%), Gaps = 9/481 (1%)
Query: 200 KVLCSSLVKFYGKCGDLDSAARVAGVV--KEVDD--FSLSALVSGYANAGKMRE--ARRV 253
++L SSL+ C +L+ ++ G V K +D + L+ L+ G + ARRV
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 254 FDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVV 313
+ + LW ++I GY + G+ EA+A++ MR+ ++ T + +L A ++ +
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 314 ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVY 373
L +Q HA ++ + V + ++D Y K + A K F E+ D I +I Y
Sbjct: 166 NLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAY 225
Query: 374 SNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFA 433
+ G +E A +F+++ +K +++W +++ G A+NA P EA++ F RM ++ D+ + A
Sbjct: 226 ARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 434 SVISACASKSCLELGEQVFGKAITVGLE-FDHI-ISTSLVDFYCKCGFVEIGRKVFDGMI 491
ISACA + ++ A G DH+ I ++L+D Y KCG VE VF M
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREMRC-SGVRPSAITFTAVLSACDHTGLVEEGR 550
+ +++++++G AT+G EAL LF M + ++P+ +TF L AC H+GLV++GR
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 551 NLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIA 610
+FD+M + + P +HY+CMVDL R G L EA++LI+ M + +W ++L C
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 611 HGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
H N I ++AAE + +L+P+ G YI LSNV A++ DW G +VR+L+ +K ++K P S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 671 W 671
W
Sbjct: 526 W 526
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 209/478 (43%), Gaps = 82/478 (17%)
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A + + + +N +W +I GY+ G +A++++ M + + V + + +L A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPV---SFTFSALLKA 158
Query: 173 CADCFALNCGKQVHARVI-VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDD 231
C LN G+Q HA+ + G + + ++++ Y KC +D A +V + E D
Sbjct: 159 CGTMKDLNLGRQFHAQTFRLRGFCFVY---VGNTMIDMYVKCESIDCARKVFDEMPERDV 215
Query: 232 FSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH 291
S + L++ YA G M A +F+S + V W ++++G+ N + EAL F RM +
Sbjct: 216 ISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS 275
Query: 292 GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD--IVVASALLDAYSKSQGPH 349
G+ D TVA +SA L + + A K G + +V+ SAL+D YSK
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK----- 330
Query: 350 EACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNAC 409
CG +E+A +F +M++K + +++S+++GLA +
Sbjct: 331 --------------------------CGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 410 PSEAIDIFCRM-NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI-TVGLEFDHIIS 467
EA+ +F M ++K + +F + AC+ ++ G QVF T G++
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424
Query: 468 TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVR 527
T +VD + G ++ EAL L + M V
Sbjct: 425 TCMVDLLGRTGRLQ-------------------------------EALELIKTM---SVE 450
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFD-TMKHNYNINPE-IEHYSCMVDLYARAGCLG 583
P + A+L AC + + + +H + + P+ I +Y + ++YA AG G
Sbjct: 451 PHGGVWGALLGACR----IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWG 504
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
NT+I+ ++ + + ++F MPE+ SW L++A+A+ G+++ A LF+S+P K+ +
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
W ++ G+++ P++AL F M + D +A + ACA A +
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSG---IRADEVTVAGYISACAQLGASKYADRAV 304
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
G V+ S+L+ Y KCG+++ A V + + F+ S+++ G A G+
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 247 MREARRVFDSRVDQCAVLWNSI 268
+EA +F V Q + N++
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTV 386
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSW 97
L+ YS+ G +++A +F M N F+++++I G E+L LFH M +T
Sbjct: 324 LIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKP 383
Query: 98 NML-----VSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHGYSKRGHPRKALSL 147
N + + A + SG + +FDSM G+ + ++ + G ++AL L
Sbjct: 384 NTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALEL 443
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI-ELEFDKVLCSSL 206
KTMS++P GV +LGAC ++ ++ A + E + ELE D + L
Sbjct: 444 IKTMSVEP------HGGVWGALLGAC----RIHNNPEI-AEIAAEHLFELEPDIIGNYIL 492
Query: 207 V-KFYGKCGDLDSAARVAGVVKE 228
+ Y GD RV ++KE
Sbjct: 493 LSNVYASAGDWGGVLRVRKLIKE 515
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 244/440 (55%), Gaps = 1/440 (0%)
Query: 232 FSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH 291
F ++ +V M A R+F+ + L+NSII Y N + + ++K++ R
Sbjct: 43 FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK 102
Query: 292 GVS-GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
D T + + SL L KQ+H H CK G +V +AL+D Y K +
Sbjct: 103 SFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVD 162
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
A K F E+ D I N++++ Y+ G+++ AK +F M KT++SW +++ G C
Sbjct: 163 AHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCY 222
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
EA+D F M + ++ D+ S SV+ +CA LELG+ + A G + +L
Sbjct: 223 VEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNAL 282
Query: 471 VDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSA 530
++ Y KCG + ++F M D +SW+T++ GYA +G A+ F EM+ + V+P+
Sbjct: 283 IEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNG 342
Query: 531 ITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIE 590
ITF +LSAC H G+ +EG FD M+ +Y I P+IEHY C++D+ ARAG L A+++ +
Sbjct: 343 ITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 591 EMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEG 650
MP + D+ +W S+L C GN + +A + +++L+PE+ G Y+ L+N+ A WE
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWED 462
Query: 651 SAQVRELMIDKNVQKIPGCS 670
+++R+++ ++N++K PG S
Sbjct: 463 VSRLRKMIRNENMKKTPGGS 482
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 182/408 (44%), Gaps = 41/408 (10%)
Query: 106 KSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGV 165
K D+ A LF+ + N ++N+II Y+ + ++K + E+ D
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFEL--PDRFT 111
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
+ +CA + GKQVH + G F V ++L+ Y K DL A +V
Sbjct: 112 FPFMFKSCASLGSCYLGKQVHGHLCKFGPR--FHVVTENALIDMYMKFDDLVDAHKVFDE 169
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
+ E D S ++L+SGYA G+M++A+ +F +D+ V W ++ISGY G +EA+ F
Sbjct: 170 MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFF 229
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
+ M+ G+ D ++ ++L + L +EL K +H +A + G V +AL++ YSK
Sbjct: 230 REMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKC 289
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
+A + FG+++ D I +TMI+ Y+ G
Sbjct: 290 GVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHG------------------------ 325
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG---KAITVGLEF 462
AI+ F M +K + +F ++SAC+ + G + F + + +
Sbjct: 326 -------AIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKI 378
Query: 463 DHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNG 509
+H L+D + G +E ++ M +K D W ++L T G
Sbjct: 379 EHY--GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 424
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 14/259 (5%)
Query: 59 PQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFD 118
P+ + + N LI+ ++ ++ ++F M E+ SWN L+S +A+ G ++ A LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA 178
M K + W +I GY+ G +A+ F+ M L +E D L +VL +CA +
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE---PDEISLISVLPSCAQLGS 256
Query: 179 LNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALV 238
L GK +H G + +C++L++ Y KCG + A ++ G ++ D S S ++
Sbjct: 257 LELGKWIHLYAERRGFLKQTG--VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 314
Query: 239 SGYANAGKMREARRVFD----SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
SGYA G A F+ ++V + + ++S G E L F MR+
Sbjct: 315 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ---- 370
Query: 295 GDVSTVANILSAGCSLLVV 313
D I GC + V+
Sbjct: 371 -DYQIEPKIEHYGCLIDVL 388
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+L G+ +H+ + G L + N L++ YS+ G + A QLF +M + SW+T+I
Sbjct: 256 SLELGKWIHLYAERRGFLKQT-GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 314
Query: 71 EAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
+ + G+ + ++ F+ M + ++ L+SA + G Q FD M +
Sbjct: 315 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQI 374
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
+ +I ++ G +A+ + KTM + P D+ + ++L +C
Sbjct: 375 EPKIEHYGCLIDVLARAGKLERAVEITKTMPMKP------DSKIWGSLLSSC 420
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/612 (28%), Positives = 304/612 (49%), Gaps = 50/612 (8%)
Query: 104 FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDA 163
+ + L A+ LFD MP ++ L WN I+ + G+ KA+ LF+ M +
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYD--- 89
Query: 164 GVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVA 223
+ +L C++ G+Q+H V+ G LE + +C+SL+ Y + G L+ + +V
Sbjct: 90 STMVKLLQVCSNKEGFAEGRQIHGYVLRLG--LESNVSMCNSLIVMYSRNGKLELSRKVF 147
Query: 224 GVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCA-----VLWNSIISGYVLNGEE 278
+K+ + S ++++S Y G + +A + D ++ C V WNS++SGY G
Sbjct: 148 NSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD-EMEICGLKPDIVTWNSLLSGYASKGLS 206
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASAL 338
+A+A+ KRM+ G+ S+++++L A ++L K +H + + + +D+ V + L
Sbjct: 207 KDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTL 266
Query: 339 LDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL---- 394
+D Y K+ A F + A + + N++++ S ++DA+ + M + +
Sbjct: 267 IDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKS----------- 443
I+WNS+ G A P +A+D+ +M + + S+ ++ S C+
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 444 ---------------------CLEL---GEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
CL L G++V G + L D ++T+LVD Y K G
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
++ ++F G+ SWN +LMGYA G G E + F M +G+ P AITFT+VLS
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 540 CDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
C ++GLV+EG FD M+ Y I P IEH SCMVDL R+G L EA D I+ M + DA
Sbjct: 507 CKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDAT 566
Query: 600 MWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMI 659
+W + L C H + + ++A +++ L+P N Y+ + N+ + WE ++R LM
Sbjct: 567 IWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMR 626
Query: 660 DKNVQKIPGCSW 671
+ V+ SW
Sbjct: 627 NNRVRVQDLWSW 638
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 193/440 (43%), Gaps = 75/440 (17%)
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGY 241
G +H +I G++ +V+ +S+ FYG+C L G+
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASM-GFYGRCVSL-----------------------GF 41
Query: 242 ANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVA 301
AN ++FD + + WN I+ + +G +A+ LF+ M+ G ST+
Sbjct: 42 AN--------KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 302 NILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY 361
+L + +Q+H + ++G+ ++ + ++L+ YS++ + K F +K
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLISWNSILVGLAKNACPSEAIDIF 417
+ N++++ Y+ G ++DA + D M +++WNS+L G A +AI +
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 418 CRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC 477
RM + LK S +S++ A A L+LG+ + G + L +D + T+L+D Y K
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 478 GFVEIGRKVFDGM-----------------------------------IKTDEVSWNTIL 502
G++ R VFD M IK D ++WN++
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
GYAT G +AL + +M+ GV P+ +++TA+ S C G +F M+ +
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GV 392
Query: 563 NPEIEHYSCMVDLYARAGCL 582
P S ++ + GCL
Sbjct: 393 GPNAATMSTLLKIL---GCL 409
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/576 (22%), Positives = 238/576 (41%), Gaps = 97/576 (16%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G +H +K G+ NS + + FY R L A +LFDEMP+ + +WN ++ +L
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 75 HSGHRNESLRLFHAMPEKTHYSW------------------------------------- 97
SG+ +++ LF M ++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 98 --NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL-- 153
N L+ ++++G L+L+ +F+SM +N WN+I+ Y+K G+ A+ L M +
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 154 --------DPLEMVHCDAGV----------------------LATVLGACADCFALNCGK 183
+ L + G+ ++++L A A+ L GK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 184 QVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYAN 243
+H ++ +L +D + ++L+ Y K G L A V ++ + + ++LVSG +
Sbjct: 246 AIHGYILRN--QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 244 AGKMREAR----RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVST 299
A +++A R+ + A+ WNS+ SGY G+ +AL + +M+ GV+ +V +
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 300 VANILSAGCS-----LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
I S GCS +++ +M GV + S LL H +
Sbjct: 364 WTAIFS-GCSKNGNFRNALKVFIKMQEE----GVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 355 FG----ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
G + D + ++ +Y G ++ A IF + +K+L SWN +L+G A
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG---KAITVGLEFDHIIS 467
E I F M ++ D +F SV+S C + ++ G + F + +H
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH--C 536
Query: 468 TSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+ +VD + G+++ M +K D W L
Sbjct: 537 SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFL 572
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 3/227 (1%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
DT +++ + Y C + A +FD M + ++WN I++ ++ +A+++F M
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
K + ++ C++K G Q+ G + +GLE + + SL+ Y + G +E
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLE 141
Query: 482 IGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD 541
+ RKVF+ M + SWN+IL Y GY +A+ L EM G++P +T+ ++LS
Sbjct: 142 LSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYA 201
Query: 542 HTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAG--CLGEAI 586
GL ++ + M+ + P S ++ A G LG+AI
Sbjct: 202 SKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHLKLGKAI 247
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 290/578 (50%), Gaps = 46/578 (7%)
Query: 99 MLVSAFAKSGDLQLAHSLF-DSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
+ SA +L LA LF + P N V+NT+I S + + L+ +M
Sbjct: 73 IFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSM------ 124
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
+ H + T L L+ KQ+H +IV G L L +SLVKFY + G+
Sbjct: 125 IRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGC-LSLGNYLWNSLVKFYMELGNFG 183
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
A +V + D S + ++ GYA G
Sbjct: 184 VAEKVFARMPHPDVSSFNVMIVGYAK-------------------------------QGF 212
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH--DIVVA 335
+EAL L+ +M G+ D TV ++L L + L K +H + G + +++++
Sbjct: 213 SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
+ALLD Y K + A + F +K D NTM+ + G +E A+ +FD M + L+
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 396 SWNSILVGLAKNACPSEAI-DIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQVFG 453
SWNS+L G +K C + ++F M +++ +K D+ + S+IS A+ L G V G
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
I + L+ D +S++L+D YCKCG +E VF + D W +++ G A +G G +
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQ 452
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV 573
AL LF M+ GV P+ +T AVL+AC H+GLVEEG ++F+ MK + +PE EHY +V
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLV 512
Query: 574 DLYARAGCLGEAIDLIE-EMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENP 632
DL RAG + EA D+++ +MP + +MW S+L C + ++A ++++L+PE
Sbjct: 513 DLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKE 572
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
G Y+ LSN+ AT W S + RE M ++ V+K G S
Sbjct: 573 GGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 208/498 (41%), Gaps = 79/498 (15%)
Query: 48 LDDATQLF-DEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAM------PEKT------- 93
LD A LF + P N F +NT+I A S +NE L+ +M P++
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 94 ------------------------HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
+Y WN LV + + G+ +A +F MP + +N
Sbjct: 142 ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFN 201
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
+I GY+K+G +AL L+ M D +E D + ++L C + GK VH +
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIE---PDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
G + +L ++L+ Y KC + A R +K+ D S + +V G+ G M
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNG-EEMEALALFKRMR-RHGVSGDVSTVANILSAG 307
A+ VFD + V WNS++ GY G ++ LF M V D T+ +++S
Sbjct: 319 AQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGA 378
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLN 367
+ + + +H ++ + D ++SAL+D Y K
Sbjct: 379 ANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCK----------------------- 415
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM 427
CG IE A +F T + K + W S++ GLA + +A+ +F RM +
Sbjct: 416 --------CGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 428 DKFSFASVISACASKSCLELGEQVFGKAI-TVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
+ + +V++AC+ +E G VF G + + SLVD C+ G VE + +
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 487 FDGM--IKTDEVSWNTIL 502
++ + W +IL
Sbjct: 528 VQKKMPMRPSQSMWGSIL 545
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 69/300 (23%)
Query: 12 LREGRQLHVSFLKTG-ILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+R G+ +H + G + +S+L +N LL Y + A + FD M + + SWNT++
Sbjct: 248 IRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMV 307
Query: 71 EAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNT 130
+ G + +F MP++ SWN L+
Sbjct: 308 VGFVRLGDMEAAQAVFDQMPKRDLVSWNSLL----------------------------- 338
Query: 131 IIHGYSKRG-HPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
GYSK+G R LF M++ +E V D + +++ A+ L+ G+ VH V
Sbjct: 339 --FGYSKKGCDQRTVRELFYEMTI--VEKVKPDRVTMVSLISGAANNGELSHGRWVHGLV 394
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
I ++L+ D L S+L+ Y KCG ++ A
Sbjct: 395 I--RLQLKGDAFLSSALIDMYCKCGIIERAF----------------------------- 423
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
VF + ++ LW S+I+G +G +AL LF RM+ GV+ + T+ +L+A CS
Sbjct: 424 --MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA-CS 480
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 209/740 (28%), Positives = 350/740 (47%), Gaps = 149/740 (20%)
Query: 9 GRTLRE---GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFS 65
R LR+ G Q+H +++G+L S +N LL Y R G L + FDE+ + +
Sbjct: 67 ARHLRDTIFGGQVHCYAIRSGLLCHS-HVSNTLLSLYERLGNLASLKKKFDEIDEPDV-- 123
Query: 66 WNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
YSW L+SA K GD++ A +FD MP ++
Sbjct: 124 -----------------------------YSWTTLLSASFKLGDIEYAFEVFDKMPERDD 154
Query: 126 L-VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
+ +WN +I G + G+ ++ LF+ M L + H G AT+L C D +L+ GKQ
Sbjct: 155 VAIWNAMITGCKESGYHETSVELFREM--HKLGVRHDKFG-FATILSMC-DYGSLDFGKQ 210
Query: 185 VHA-----------------------------------------------RVIVEGIE-- 195
VH+ V+++G+
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF 270
Query: 196 ------LEFDKVLCSSL-------VKFYGKCGDLDSAARVAGVVKEV--DDFSL--SALV 238
L F K+L +SL V G C +V G+ + + ++L +A +
Sbjct: 271 KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATM 330
Query: 239 SGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVS 298
+ Y++ A +VF+S ++ V WN++IS Y A++++KRM GV D
Sbjct: 331 TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEF 390
Query: 299 TVANILSAGCSLLVVELVKQMHAHAC--KIGVTHDIVVASALLDAYSKSQGPHEACKFFG 356
T ++L+ L V+E+V+ AC K G++ I +++AL+ AYSK+
Sbjct: 391 TFGSLLATSLDLDVLEMVQ-----ACIIKFGLSSKIEISNALISAYSKN----------- 434
Query: 357 ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDI 416
G+IE A +F+ K LISWN+I+ G N P E ++
Sbjct: 435 --------------------GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 417 FCRMNMLDLKM--DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
F + ++++ D ++ ++++S C S S L LG Q + G + +I +L++ Y
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG-VRPSAITF 533
+CG ++ +VF+ M + D VSWN+++ Y+ +G G A+ ++ M+ G V P A TF
Sbjct: 535 SQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATF 594
Query: 534 TAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDL--IEE 591
+AVLSAC H GLVEEG +F++M + + ++H+SC+VDL RAG L EA L I E
Sbjct: 595 SAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISE 654
Query: 592 MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGS 651
+ ++W+++ C AHG+ +GKM A+ +++ + ++P Y+QLSN+ A + W+ +
Sbjct: 655 KTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEA 714
Query: 652 AQVRELMIDKNVQKIPGCSW 671
+ R + K GCSW
Sbjct: 715 EETRRAINMIGAMKQRGCSW 734
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 222/496 (44%), Gaps = 66/496 (13%)
Query: 129 NTIIHGYSKRGHPRKALSLF----KTMSLDPLEMVHCDAGVLA-----TVLGACADCFAL 179
N + G ++ G R AL LF + +L P + A A T+ G C+A+
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVS 239
G H+ V ++L+ Y + G+L S + + E D +S + L+S
Sbjct: 85 RSGLLCHSHV-------------SNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLS 131
Query: 240 GYANAGKMREARRVFDSRVDQCAV-LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVS 298
G + A VFD ++ V +WN++I+G +G ++ LF+ M + GV D
Sbjct: 132 ASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKF 191
Query: 299 TVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL 358
A ILS C ++ KQ+H+ K G +AS+
Sbjct: 192 GFATILSM-CDYGSLDFGKQVHSLVIKAG----FFIASS--------------------- 225
Query: 359 KAYDTILLNTMITVYSNCGRIEDAKWIFDT--MSSKTLISWNSILVGLAKNACPSEAIDI 416
++N +IT+Y NC + DA +F+ ++ + +++N ++ GLA E++ +
Sbjct: 226 ------VVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFK-RDESLLV 278
Query: 417 FCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCK 476
F +M L+ +F SV+ +C SC +G QV G AI G E ++S + + Y
Sbjct: 279 FRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSS 335
Query: 477 CGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
KVF+ + + D V+WNT++ Y G A+++++ M GV+P TF ++
Sbjct: 336 FEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSL 395
Query: 537 LSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
L+ ++E + + ++ +IE + ++ Y++ G + E DL+ E +
Sbjct: 396 LATSLDLDVLE----MVQACIIKFGLSSKIEISNALISAYSKNGQI-EKADLLFERSLRK 450
Query: 597 DANMWFSVLRGCIAHG 612
+ W +++ G +G
Sbjct: 451 NLISWNAIISGFYHNG 466
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNM-LDLKMDKFSFASVISACASKSCLELG 448
+S TL++ N L GL ++ A+ +F ++ L+ D++S + I+ G
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL------ 502
QV AI GL +S +L+ Y + G + +K FD + + D SW T+L
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 503 --------------------------MGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
G +GY ++ LFREM GVR F +
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 537 LSACDHTGL 545
LS CD+ L
Sbjct: 197 LSMCDYGSL 205
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 202/707 (28%), Positives = 323/707 (45%), Gaps = 117/707 (16%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R EG +++ S + + + + N L + R G L DA +F +M + N FSWN L
Sbjct: 108 RAQEEGSKVY-SIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVL 166
Query: 70 IEAHLHSGHRNESLRLFHAM-----------------------PE-----KTH-----YS 96
+ + G+ +E++ L+H M P+ + H Y
Sbjct: 167 VGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYG 226
Query: 97 W-------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF- 148
+ N L++ + K GD++ A LFD MP ++ + WN +I GY + G + L LF
Sbjct: 227 YELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFF 286
Query: 149 --KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
+ +S+DP D L +V+ AC G+ +HA VI G + D +C+SL
Sbjct: 287 AMRGLSVDP------DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV--DISVCNSL 338
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWN 266
+ Y NAG REA ++F + V W
Sbjct: 339 TQMY-------------------------------LNAGSWREAEKLFSRMERKDIVSWT 367
Query: 267 SIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
++ISGY N +A+ ++ M + V D TVA +LSA +L ++ ++H A K
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
+ ++VA N +I +YS C I+ A IF
Sbjct: 428 RLISYVIVA-------------------------------NNLINMYSKCKCIDKALDIF 456
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
+ K +ISW SI+ GL N EA+ IF R + L+ + + + ++ACA L
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALM 515
Query: 447 LGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYA 506
G+++ + G+ D + +L+D Y +CG + F+ K D SWN +L GY+
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYS 574
Query: 507 TNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEI 566
G GS + LF M S VRP ITF ++L C + +V +G F M+ +Y + P +
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNL 633
Query: 567 EHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQ 626
+HY+C+VDL RAG L EA I++MP D +W ++L C H +G+++A+ I +
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFE 693
Query: 627 LDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
LD ++ G YI L N+ A W A+VR +M + + GCSW +
Sbjct: 694 LDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 179/591 (30%), Positives = 296/591 (50%), Gaps = 83/591 (14%)
Query: 90 PEKTH-YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
P+K H + N++VS F K G ++ A SLFD MP ++ + W +I GY+ + +A F
Sbjct: 41 PKKHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECF 99
Query: 149 KTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE--LEFDKVLC 203
M P E L++VL +C + L G VH V+ G+E L D
Sbjct: 100 HEMVKQGTSPNEFT------LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVD---- 149
Query: 204 SSLVKFYGKCG-DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCA 262
++++ Y C +++A + +K +D
Sbjct: 150 NAMMNMYATCSVTMEAACLIFRDIKVKND------------------------------- 178
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
V W ++I+G+ G+ + L ++K+M + + A S+ V KQ+HA
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHAS 238
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
K G ++ V +++LD Y + CG + +A
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCR-------------------------------CGYLSEA 267
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
K F M K LI+WN+++ L ++ SEA+ +F R + ++F S+++ACA+
Sbjct: 268 KHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANI 326
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI-KTDEVSWNTI 501
+ L G+Q+ G+ G + ++ +L+D Y KCG + ++VF ++ + + VSW ++
Sbjct: 327 AALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSM 386
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
++GY ++GYG+EA+ LF +M SG+RP I F AVLSAC H GLVE+G F+ M+ Y
Sbjct: 387 MIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYG 446
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG-NRTIGKMA 620
INP+ + Y+C+VDL RAG +GEA +L+E MPF+ D + W ++L C AH N I ++A
Sbjct: 447 INPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLA 506
Query: 621 AEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
A K+++L P+ G Y+ LS + A W A+VR++M +K G SW
Sbjct: 507 ARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSW 557
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 46/249 (18%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
++ G+Q+H S +K G S+L N +L Y R G L +A F EM + +WNTLI
Sbjct: 228 SVTTGKQIHASVIKRG-FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 71 EAHLHSGHRNESLRLFHAMPEKTH----YSWNMLVSA----------------------- 103
+ L +E+L +F + Y++ LV+A
Sbjct: 287 -SELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 104 ------------FAKSGDLQLAHSLFDSMPCKNGLV-WNTIIHGYSKRGHPRKALSLFKT 150
+AK G++ + +F + + LV W +++ GY G+ +A+ LF
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M + D V VL AC + G + + V+ + D+ + + +V
Sbjct: 406 MVSSG---IRPDRIVFMAVLSACRHAGLVEKGLK-YFNVMESEYGINPDRDIYNCVVDLL 461
Query: 211 GKCGDLDSA 219
G+ G + A
Sbjct: 462 GRAGKIGEA 470
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 198/701 (28%), Positives = 327/701 (46%), Gaps = 117/701 (16%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH- 73
+ +H LK G L N LL Y + G DA LFDEMP+ N S+ TL + +
Sbjct: 68 AKAIHCDILKKGSC-LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA 126
Query: 74 ----------LH-SGHR------NESLRLF------------HAMPEKTHYSWNM----- 99
LH GH L+LF H+ K Y N
Sbjct: 127 CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
L++A++ G + A ++F+ + CK+ +VW I+ Y + G+ +L L M +
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM------ 240
Query: 160 HCDAGVLA------TVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
AG + T L A A + K VH +++ C
Sbjct: 241 ---AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL--------------------KTC 277
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
LD V L+ Y G M +A +VF+ V W+ +I+ +
Sbjct: 278 YVLDPRVGVG-------------LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVE-LVKQMHAHACKIGVTHDI 332
NG EA+ LF RMR V + T+++IL+ GC++ L +Q+H K+G DI
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILN-GCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
V++AL+D VY+ C +++ A +F +SSK
Sbjct: 384 YVSNALID-------------------------------VYAKCEKMDTAVKLFAELSSK 412
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+SWN+++VG +A +F + + + +F+S + ACAS + ++LG QV
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGS 512
G AI +S SL+D Y KCG ++ + VF+ M D SWN ++ GY+T+G G
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGR 532
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
+AL + M+ +P+ +TF VLS C + GL+++G+ F++M ++ I P +EHY+CM
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 573 VDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENP 632
V L R+G L +A+ LIE +P++ +W ++L + N + +AE+I++++P++
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDE 652
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
Y+ +SN+ A ++ W A +R+ M + V+K PG SW +
Sbjct: 653 ATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 51/289 (17%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
IG+ G QLH +K G + + +N L+ Y++ +D A +LF E+ N SW
Sbjct: 359 AIGKCSGLGEQLHGLVVKVG-FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 67 NTLIEAHLHSGHRNESLRLF----------------------------------HAMPEK 92
NT+I + + G ++ +F H + K
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK 477
Query: 93 THYSW-----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
T+ + N L+ +AK GD++ A S+F+ M + WN +I GYS G R+AL +
Sbjct: 478 TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRI 537
Query: 148 FKTMSLDPLEMVHCDAGVLA--TVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCS 204
LD ++ C L VL C++ ++ G++ +I + GIE + C
Sbjct: 538 -----LDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC- 591
Query: 205 SLVKFYGKCGDLDSAAR-VAGVVKEVDDFSLSALVSGYANAGKMREARR 252
+V+ G+ G LD A + + G+ E A++S N ARR
Sbjct: 592 -MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 184/631 (29%), Positives = 300/631 (47%), Gaps = 79/631 (12%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPE---- 91
NR ++ Y + GC+DDA +LF+EMP+ + SWN +I A +G +E R+F M
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 92 ------------------------------KTHYSWNM-----LVSAFAKSGDLQLAHSL 116
K YS N+ +V + K + A +
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 117 FDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF-KTMSLDPLEMVHCDAGVLATVLGACAD 175
FD + + + WN I+ Y + G +A+ +F K + L+ + H +++V+ AC+
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH----TVSSVMLACSR 275
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLS 235
AL GK +HA I + + D V+ +S+ Y KC L+SA RV + D S +
Sbjct: 276 SLALEVGKVIHA--IAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 236 ALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
+ +SGYA +G REAR +FD ++ V WN+++ GYV E EAL MR+ +
Sbjct: 334 SAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 296 DVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFF 355
D T+ IL+ + V++ KQ H + G +++VA+ALLD
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLD--------------- 438
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS-KTLISWNSILVGLAKNACPSEAI 414
+Y CG ++ A F MS + +SWN++L G+A+ +A+
Sbjct: 439 ----------------MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 415 DIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
F M ++ K K++ A++++ CA+ L LG+ + G I G + D +I ++VD Y
Sbjct: 483 SFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMY 541
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
KC + +VF D + WN+I+ G NG E LF + GV+P +TF
Sbjct: 542 SKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFL 601
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPF 594
+L AC G VE G F +M Y+I+P++EHY CM++LY + GCL + + + MPF
Sbjct: 602 GILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPF 661
Query: 595 QADANMWFSVLRGCIAHGNRTIGKMAAEKII 625
M + C + +G AA++++
Sbjct: 662 DPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 195/444 (43%), Gaps = 68/444 (15%)
Query: 232 FSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH 291
F L+ + Y G + +AR +F+ ++ WN++I+ NG E +F+RM R
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 292 GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEA 351
GV ++ A +L + +L + L++Q+H K G + ++ + ++++D Y K
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGK------- 209
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
C + DA+ +FD + + + +SWN I+ +
Sbjct: 210 ------------------------CRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLV 471
EA+ +F +M L+++ + +SV+ AC+ LE+G+ + A+ + + D ++STS+
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLF------------- 518
D Y KC +E R+VFD D SW + + GYA +G EA LF
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 519 ------------------REMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM-KHN 559
MR +T +L+ C V+ G+ + +H
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425
Query: 560 YNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKM 619
Y+ N + + ++D+Y + G L A +M D W ++L G +A R+ +
Sbjct: 426 YDTNVIVAN--ALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG-VARVGRSEQAL 482
Query: 620 AAEKIIQLDPENPGAYIQLSNVLA 643
+ + +Q++ + P Y L+ +LA
Sbjct: 483 SFFEGMQVEAK-PSKY-TLATLLA 504
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 192/495 (38%), Gaps = 113/495 (22%)
Query: 27 ILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESL--- 83
I+N S + N +++ Y G D+A +F +M + N N + + + + R+ +L
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 84 ------------------------------------RLFHAMPEKTHYSWNMLVSAFAKS 107
R+F K SW +S +A S
Sbjct: 283 KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMS 342
Query: 108 GDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLA 167
G + A LFD MP +N + WN ++ GY +AL M E+ + D L
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR---QEIENIDNVTLV 399
Query: 168 TVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVK 227
+L C+ + GKQ H + G + + ++ ++L+ YGKCG L SA +
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDT--NVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 228 EV-DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFK 286
E+ D+ S +AL++G A G+ +A F+ G ++EA
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFE--------------------GMQVEA----- 492
Query: 287 RMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
T+A +L+ ++ + L K +H + G D+V+ A++D YSK +
Sbjct: 493 -------KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCR 545
Query: 347 GPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAK 406
A + F E D IL WNSI+ G +
Sbjct: 546 CFDYAIEVFKEAATRDLIL-------------------------------WNSIIRGCCR 574
Query: 407 NACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT---VGLEFD 463
N E ++F + +K D +F ++ AC + +ELG Q F T + + +
Sbjct: 575 NGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVE 634
Query: 464 HIISTSLVDFYCKCG 478
H +++ YCK G
Sbjct: 635 HY--DCMIELYCKYG 647
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 283/578 (48%), Gaps = 67/578 (11%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N L+ + K + +A+ +FDSMP +N + W+ ++ G+ G + +LSLF M +
Sbjct: 45 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR---Q 101
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
++ + +T L AC AL G Q+H + G E+ + + +SLV Y KCG
Sbjct: 102 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE--VGNSLVDMYSKCG--- 156
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
++ EA +VF VD+ + WN++I+G+V G
Sbjct: 157 ----------------------------RINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 278 EMEALALFKRMRRHGVS--GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVA 335
+AL F M+ + D T+ ++L A S ++ KQ+H + G
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF------- 241
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
P A + +++ +Y CG + A+ FD + KT+I
Sbjct: 242 ----------HCPSSA------------TITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
SW+S+++G A+ EA+ +F R+ L+ ++D F+ +S+I A + L G+Q+ A
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
+ + + + S+VD Y KCG V+ K F M D +SW ++ GY +G G +++
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDL 575
+F EM + P + + AVLSAC H+G+++EG LF + + I P +EHY+C+VDL
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 459
Query: 576 YARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAY 635
RAG L EA LI+ MP + + +W ++L C HG+ +GK + ++++D +NP Y
Sbjct: 460 LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANY 519
Query: 636 IQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+ +SN+ + W REL K ++K G SW +
Sbjct: 520 VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 221/532 (41%), Gaps = 109/532 (20%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDD--ATQLFDEMPQTNAFSWNTLIE 71
+G Q+H LK+G +L T+N L+ Y + C + A ++FD MP+ N SW+ L+
Sbjct: 24 QGGQVHCYLLKSGS-GLNLITSNYLIDMYCK--CREPLMAYKVFDSMPERNVVSWSALMS 80
Query: 72 AHLHSGHRNESLRLFHAM------PEKTHYSWNM-------------------------- 99
H+ +G SL LF M P + +S N+
Sbjct: 81 GHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM 140
Query: 100 -------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
LV ++K G + A +F + ++ + WN +I G+ G+ KAL F M
Sbjct: 141 MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
++ D L ++L AC+ + GKQ+H ++ G + SLV Y K
Sbjct: 201 EANIKE-RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVK 259
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
CG L SA + +KE S S+L+ GYA
Sbjct: 260 CGYLFSARKAFDQIKEKTMISWSSLILGYAQ----------------------------- 290
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
GE +EA+ LFKR++ D +++I+ ++ KQM A A K+ +
Sbjct: 291 --EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
V ++++D Y K EA K F E++ D
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKD------------------------------ 378
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+ISW ++ G K+ +++ IF M +++ D+ + +V+SAC+ ++ GE++F
Sbjct: 379 -VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 453 GKAI-TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
K + T G++ +VD + G ++ + + D M IK + W T+L
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 10/273 (3%)
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
QG C + I N +I +Y C A +FD+M + ++SW++++ G
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
N ++ +F M + ++F+F++ + AC + LE G Q+ G + +G E
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 466 ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
+ SLVD Y KCG + KVF ++ +SWN ++ G+ GYGS+AL F M+ +
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 526 V--RPSAITFTAVLSACDHTGLVEEGRNLFDTM-KHNYNINPEIEHYSCMVDLYARAGCL 582
+ RP T T++L AC TG++ G+ + + + ++ +VDLY + G L
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 583 ---GEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+A D I+E + W S++ G G
Sbjct: 264 FSARKAFDQIKEKTMIS----WSSLILGYAQEG 292
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 148/350 (42%), Gaps = 62/350 (17%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
G+ L +G Q+H LK G + N L+ YS+ G +++A ++F + + SW
Sbjct: 118 GLLNALEKGLQIHGFCLKIG-FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW 176
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPE----------------KTHYSWNM----------- 99
N +I +H+G+ +++L F M E K S M
Sbjct: 177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 100 ----------------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRK 143
LV + K G L A FD + K + W+++I GY++ G +
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 144 ALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC 203
A+ LFK + ++ D+ L++++G AD L GKQ+ A + LE +
Sbjct: 297 AMGLFKRLQELNSQI---DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VL 351
Query: 204 SSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF--------- 254
+S+V Y KCG +D A + ++ D S + +++GY G +++ R+F
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANIL 304
V AVL SG + GEE+ K + HG+ V A ++
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEEL----FSKLLETHGIKPRVEHYACVV 457
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
+ S++ C K + G QV + G + I S L+D YCKC + KVFD M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR 550
+ + VSW+ ++ G+ NG +L+LF EM G+ P+ TF+ L AC +E+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 551 NLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
+ +K + + E+ + +VD+Y++ G + EA
Sbjct: 128 QIHGFCLKIGFEMMVEVG--NSLVDMYSKCGRINEA 161
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 281/571 (49%), Gaps = 68/571 (11%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
L+++ + G++ A +FD +P + V+N++I YS+ +P + L L+ M E +
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQM---IAEKI 112
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D+ + AC L G+ V + + G + D +CSS++ Y KCG
Sbjct: 113 QPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFG--YKNDVFVCSSVLNLYMKCG----- 165
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
KM EA +F + + W ++++G+ G+ +
Sbjct: 166 --------------------------KMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSL 199
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+A+ ++ M+ G D + +L A L ++ + +H + + G+ ++VV ++L+
Sbjct: 200 KAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLV 259
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
D Y+K G IE A +F M KT +SW S
Sbjct: 260 DMYAK-------------------------------VGFIEVASRVFSRMMFKTAVSWGS 288
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
++ G A+N ++A + M L + D + V+ AC+ L+ G V +
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
+ D + +T+L+D Y KCG + R++F+ + + D V WNT++ Y +G G E ++LF
Sbjct: 349 V-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFL 407
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
+M S + P TF ++LSA H+GLVE+G++ F M + Y I P +HY C++DL ARA
Sbjct: 408 KMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARA 467
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G + EA+D+I +W ++L GCI H N ++G +AA KI+QL+P++ G +S
Sbjct: 468 GRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Query: 640 NVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
N AT+ W+ A+VR+LM + ++K+PG S
Sbjct: 528 NFFATANKWKEVAKVRKLMRNGAMEKVPGYS 558
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 122/311 (39%), Gaps = 82/311 (26%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGH-----------RNESL--- 83
+L Y + G +D+A LF +M + + W T++ +G +NE
Sbjct: 157 VLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRD 216
Query: 84 --------------------RLFHAMPEKTHYSWNM-----LVSAFAKSGDLQLAHSLFD 118
R H +T N+ LV +AK G +++A +F
Sbjct: 217 RVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFS 276
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPRKALSL---FKTMSLDPLEMVHCDAGVLATVLGACAD 175
M K + W ++I G+++ G KA +++ P D L VL AC+
Sbjct: 277 RMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQP------DLVTLVGVLVACSQ 330
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLS 235
+L G+ VH ++ + D+V ++L+ Y KC
Sbjct: 331 VGSLKTGRLVHCYILKRHV---LDRVTATALMDMYSKC---------------------- 365
Query: 236 ALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
G + +R +F+ + V WN++IS Y ++G E ++LF +M +
Sbjct: 366 ---------GALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 296 DVSTVANILSA 306
D +T A++LSA
Sbjct: 417 DHATFASLLSA 427
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/566 (30%), Positives = 271/566 (47%), Gaps = 66/566 (11%)
Query: 109 DLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAGV 165
+L A S+F+S+ C + +WN++I GYS +P KAL ++ M P D
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSP------DYFT 109
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
VL AC+ + G VH V+ G E+ C L+ Y CG+++ R
Sbjct: 110 FPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTC--LLHMYMCCGEVNYGLR---- 163
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
VF+ V W S+ISG+V N +A+ F
Sbjct: 164 ---------------------------VFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAF 196
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
+ M+ +GV + + + ++L A + K H +G D Y +S
Sbjct: 197 REMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG-----------FDPYFQS 245
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
+ ++ IL ++I +Y+ CG + A+++FD M +TL+SWNSI+ G +
Sbjct: 246 K------------VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS 293
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
+N EA+ +F M L + DK +F SVI A + C +LG+ + G D
Sbjct: 294 QNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAA 353
Query: 466 ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
I +LV+ Y K G E +K F+ + K D ++W +++G A++G+G+EAL++F+ M+ G
Sbjct: 354 IVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
Query: 526 -VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
P IT+ VL AC H GLVEEG+ F M+ + + P +EHY CMVD+ +RAG E
Sbjct: 414 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEE 473
Query: 585 AIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLAT 644
A L++ MP + + N+W ++L GC H N + + + + G Y+ LSN+ A
Sbjct: 474 AERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAK 533
Query: 645 SEDWEGSAQVRELMIDKNVQKIPGCS 670
+ W +RE M K V K+ G S
Sbjct: 534 AGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/556 (23%), Positives = 227/556 (40%), Gaps = 132/556 (23%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYS---RRGCLDDATQLFDEMPQTNAFSW 66
R+L E QLH +K+ ++ + + + RL+ F + L A +F+ + + + W
Sbjct: 17 RSLVELNQLHGLMIKSSVIRNVIPLS-RLIDFCTTCPETMNLSYARSVFESIDCPSVYIW 75
Query: 67 NTLIEAHLHSGHRNESLRLFHAM------PE----------------------------K 92
N++I + +S + +++L + M P+ K
Sbjct: 76 NSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVK 135
Query: 93 THYSWNMLVSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
T + NM VS + G++ +F+ +P N + W ++I G+ A+
Sbjct: 136 TGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEA 195
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE--------FD 199
F+ M + V + ++ +L AC C + GK H ++G+ + F+
Sbjct: 196 FREMQSNG---VKANETIMVDLLVACGRCKDIVTGKWFHG--FLQGLGFDPYFQSKVGFN 250
Query: 200 KVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVD 259
+L +SL+ Y KCGDL R AR +FD +
Sbjct: 251 VILATSLIDMYAKCGDL-------------------------------RTARYLFDGMPE 279
Query: 260 QCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA----GCSLLVVEL 315
+ V WNSII+GY NG+ EAL +F M G++ D T +++ A GCS +L
Sbjct: 280 RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS----QL 335
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
+ +HA+ K G D + AL++ Y+K+ A K F +L+ DT
Sbjct: 336 GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT------------ 383
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML-DLKMDKFSFAS 434
I+W +++GLA + +EA+ IF RM + D ++
Sbjct: 384 -------------------IAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424
Query: 435 VISACASKSCLELGEQVFGKAITV-GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT 493
V+ AC+ +E G++ F + + GLE +VD + G E + ++KT
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER----LVKT 480
Query: 494 DEVSWNTILMGYATNG 509
V N + G NG
Sbjct: 481 MPVKPNVNIWGALLNG 496
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 13/263 (4%)
Query: 362 DTILLNTMITVYSNCGR---IEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFC 418
+ I L+ +I + C + A+ +F+++ ++ WNS++ G + + P +A+ +
Sbjct: 37 NVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQ 96
Query: 419 RMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG 478
M D F+F V+ AC+ ++ G V G + G E + +ST L+ Y CG
Sbjct: 97 EMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 479 FVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLS 538
V G +VF+ + + + V+W +++ G+ N S+A+ FREM+ +GV+ + +L
Sbjct: 157 EVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLV 216
Query: 539 ACDHTGLVEEGRNLFDTMKHNYNINPEIEHY--------SCMVDLYARAGCLGEAIDLIE 590
AC + G+ F +P + + ++D+YA+ G L A L +
Sbjct: 217 ACGRCKDIVTGK-WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 591 EMPFQADANMWFSVLRGCIAHGN 613
MP + + W S++ G +G+
Sbjct: 276 GMPERTLVS-WNSIITGYSQNGD 297
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 180/444 (40%), Gaps = 75/444 (16%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R ++ G +H +KTG ++ + LL Y G ++ ++F+++PQ N +W +L
Sbjct: 121 RDIQFGSCVHGFVVKTG-FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 70 IEAHLHSGHRNESLRLFHAMPE-------------------------------------- 91
I +++ ++++ F M
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 92 ----KTHYSWNM-----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
++ +N+ L+ +AK GDL+ A LFD MP + + WN+II GYS+ G
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 143 KALSLFKTMSLDPLEM-VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
+AL +F LD L++ + D +V+ A G+ +HA V G D
Sbjct: 300 EALCMF----LDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVK--DAA 353
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC 261
+ +LV Y K GD +SA + +++ D + + ++ G A+ G EA +F ++
Sbjct: 354 IVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
Query: 262 AVLWNSIISGYVLN-----GEEMEALALFKRMRR-HGVSGDVS---TVANILS-AGCSLL 311
+ I VL G E F MR HG+ V + +ILS AG
Sbjct: 414 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEE 473
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALL---DAYSKSQGPHEACKFFGELKAYDTILLNT 368
LVK M V ++ + ALL D + + E + + +
Sbjct: 474 AERLVKTMP-------VKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVL 526
Query: 369 MITVYSNCGRIEDAKWIFDTMSSK 392
+ +Y+ GR D K I ++M SK
Sbjct: 527 LSNIYAKAGRWADVKLIRESMKSK 550
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 233/442 (52%), Gaps = 36/442 (8%)
Query: 232 FSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH 291
F ++ L++ Y + +A ++FD + + W ++IS Y +AL L M R
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 292 GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEA 351
V +V T +++L + + V+ +H K G+ D+ V SAL+D ++K P
Sbjct: 157 NVRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP--- 210
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
EDA +FD M + I WNSI+ G A+N+
Sbjct: 211 ----------------------------EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLV 471
A+++F RM ++ + SV+ AC + LELG Q V + D I++ +LV
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ--AHVHIVKYDQDLILNNALV 300
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
D YCKCG +E +VF+ M + D ++W+T++ G A NGY EAL LF M+ SG +P+ I
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
T VL AC H GL+E+G F +MK Y I+P EHY CM+DL +AG L +A+ L+ E
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNE 420
Query: 592 MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGS 651
M + DA W ++L C N + + AA+K+I LDPE+ G Y LSN+ A S+ W+
Sbjct: 421 MECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSV 480
Query: 652 AQVRELMIDKNVQKIPGCSWAD 673
++R M D+ ++K PGCSW +
Sbjct: 481 EEIRTRMRDRGIKKEPGCSWIE 502
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 178/410 (43%), Gaps = 80/410 (19%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N+L++ + K L AH LFD MP +N + W T+I YSK +KAL L M D
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN-- 157
Query: 158 MVHCDAGVLATVLGAC---ADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
V + ++VL +C +D L+CG +I EG+E
Sbjct: 158 -VRPNVYTYSSVLRSCNGMSDVRMLHCG------IIKEGLE------------------- 191
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
D F SAL+ +A G+ +A VFD V A++WNSII G+
Sbjct: 192 --------------SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVV 334
N AL LFKRM+R G + +T+ ++L A L ++EL Q H H K D+++
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLIL 295
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
+AL+D Y K +A + F ++K D I +TMI+
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS----------------------- 332
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
GLA+N EA+ +F RM K + + V+ AC+ LE G F
Sbjct: 333 --------GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 455 AITV-GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+ G++ ++D K G ++ K+ + M + D V+W T+L
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 35 ANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAM----- 89
N L+ Y + L+DA QLFD+MPQ N SW T+I A+ ++L L M
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV 158
Query: 90 -PEKTHYS------------------------------WNMLVSAFAKSGDLQLAHSLFD 118
P YS + L+ FAK G+ + A S+FD
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA 178
M + +VWN+II G+++ AL LFK M + L +VL AC
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI---AEQATLTSVLRACTGLAL 275
Query: 179 LNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALV 238
L G Q H ++ + + D +L ++LV Y KC
Sbjct: 276 LELGMQAHVHIV----KYDQDLILNNALVDMYCKC------------------------- 306
Query: 239 SGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVS 298
G + +A RVF+ ++ + W+++ISG NG EAL LF+RM+ G +
Sbjct: 307 ------GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 299 TVANILSAGCS 309
T+ +L A CS
Sbjct: 361 TIVGVLFA-CS 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 428 DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF 487
D +++ +I C S + G + G + L++ Y K + ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 488 DGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD------ 541
D M + + +SW T++ Y+ +AL L M VRP+ T+++VL +C+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 542 --HTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
H G+++EG + ++ S ++D++A+ G +A+ + +EM DA
Sbjct: 180 MLHCGIIKEG------------LESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAI 226
Query: 600 MWFSVLRGCIAHGNRT 615
+W S++ G A +R+
Sbjct: 227 VWNSIIGG-FAQNSRS 241
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L G Q HV +K + L N L+ Y + G L+DA ++F++M + + +W+T+I
Sbjct: 276 LELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 72 AHLHSGHRNESLRLFHAMPEK-THYSWNMLVS---AFAKSGDLQLAHSLFDSMPCKNGLV 127
+G+ E+L+LF M T ++ +V A + +G L+ F SM G+
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 128 -----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
+ +I K G A+ L M +P DA T+LGAC
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEP------DAVTWRTLLGAC 437
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 247/466 (53%), Gaps = 32/466 (6%)
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWN 266
+ Y K GD SA V G +++ + S + L++GY AG + AR+VFD D+ WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 267 SIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
++I+G + E L+LF+ M G S D T+ ++ S L V + +Q+H + K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
G+ D+VV S+L Y ++ G+++D + +
Sbjct: 121 GLELDLVVNSSLAHMYMRN-------------------------------GKLQDGEIVI 149
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
+M + L++WN++++G A+N CP + ++ M + + +K +F +V+S+C+ +
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 447 LGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYA 506
G+Q+ +AI +G + +SL+ Y KCG + K F DEV W++++ Y
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 507 TNGYGSEALTLFREM-RCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPE 565
+G G EA+ LF M + + + + F +L AC H+GL ++G LFD M Y P
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 566 IEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKII 625
++HY+C+VDL RAGCL +A +I MP + D +W ++L C H N + + ++I+
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
Query: 626 QLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
Q+DP + Y+ L+NV A+++ W ++VR+ M DKNV+K G SW
Sbjct: 390 QIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISW 435
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 194/445 (43%), Gaps = 74/445 (16%)
Query: 82 SLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHP 141
++ ++ M +K + S N+L++ + ++GDL A +FD MP + WN +I G +
Sbjct: 13 AVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN 72
Query: 142 RKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEF 198
+ LSLF+ M P D L +V A +++ G+Q+H I G+EL
Sbjct: 73 EEGLSLFREMHGLGFSP------DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL-- 124
Query: 199 DKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRV 258
D V+ SSL Y + GK+++ V S
Sbjct: 125 DLVVNSSLAHMYMR-------------------------------NGKLQDGEIVIRSMP 153
Query: 259 DQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQ 318
+ V WN++I G NG L L+K M+ G + T +LS+ L + +Q
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
Query: 319 MHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGR 378
+HA A KIG + + V S+L+ YSK +A K F E + D ++ ++MI+ Y G+
Sbjct: 214 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 273
Query: 379 IEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISA 438
++A +F+TM+ +T ++++++ +F +++ A
Sbjct: 274 GDEAIELFNTMAEQT------------------------------NMEINEVAFLNLLYA 303
Query: 439 CASKSCLELGEQVFGKAI-TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEV 496
C+ + G ++F + G + T +VD + G ++ + M IKTD V
Sbjct: 304 CSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV 363
Query: 497 SWNTILMGYATNGYGSEALTLFREM 521
W T+L + A +F+E+
Sbjct: 364 IWKTLLSACNIHKNAEMAQRVFKEI 388
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
+G+Q+H +K G + ++ L+ YS+ GCL DA + F E + W+++I A+
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSS-LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 74 LHSGHRNESLRLFHAMPEKTHYSWNM-----LVSAFAKSGDLQLAHSLFDSMPCKNGLV- 127
G +E++ LF+ M E+T+ N L+ A + SG LFD M K G
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 128 ----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGK 183
+ ++ + G +A ++ ++M + D + T+L AC ++
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMP------IKTDIVIWKTLLSAC----NIHKNA 378
Query: 184 QVHARVIVEGIELEFDKVLCSSLV 207
++ RV E ++++ + C L+
Sbjct: 379 EMAQRVFKEILQIDPNDSACYVLL 402
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 245/450 (54%), Gaps = 37/450 (8%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D F + L+ Y++ G + AR+VFD + +WN++ L G E L L+ +M
Sbjct: 111 DPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN 170
Query: 290 RHGVSGDVSTVANILSA----GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
R GV D T +L A C++ + K++HAH + G + + + + L+D Y++
Sbjct: 171 RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR- 229
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
FG C ++ A ++F M + ++SW++++ A
Sbjct: 230 ---------FG-------------------C--VDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 406 KNACPSEAIDIFCRM--NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFD 463
KN EA+ F M D + + SV+ ACAS + LE G+ + G + GL+
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 464 HIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRC 523
+ ++LV Y +CG +E+G++VFD M D VSWN+++ Y +GYG +A+ +F EM
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 524 SGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLG 583
+G P+ +TF +VL AC H GLVEEG+ LF+TM ++ I P+IEHY+CMVDL RA L
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD 439
Query: 584 EAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLA 643
EA ++++M + +W S+L C HGN + + A+ ++ L+P+N G Y+ L+++ A
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYA 499
Query: 644 TSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
++ W+ +V++L+ + +QK+PG W +
Sbjct: 500 EAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 214/558 (38%), Gaps = 120/558 (21%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAM----PE 91
N+L+Q + G L A ++ + + ++ LI H +++LR+ + +
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSD 109
Query: 92 KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
+ + L+ ++ G + A +FD + VWN + + GH + L L+ M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 152 SLDPLEMVHCDAGVLATVLGAC--ADCFA--LNCGKQVHARVIVEGIELEFDKVLCSSLV 207
+ +E D VL AC ++C L GK++HA + G + ++LV
Sbjct: 170 NRIGVE---SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV--YIMTTLV 224
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
Y + G +D A+ V G + + S SA+++ YA GK
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK--------------------- 263
Query: 268 IISGYVLNGEEMEALALFKRMRRH--GVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
EAL F+ M R S + T+ ++L A SL +E K +H + +
Sbjct: 264 ----------AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWI 385
G+ + V SAL +T+Y CG++E + +
Sbjct: 314 RGLDSILPVISAL-------------------------------VTMYGRCGKLEVGQRV 342
Query: 386 FDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCL 445
FD M + ++SWNS++ + +AI IF M +F SV+ AC+ + +
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 446 ELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGY 505
E G+++F + DH I + + C L+G
Sbjct: 403 EEGKRLFET-----MWRDHGIKPQIEHYACMVD-----------------------LLGR 434
Query: 506 ATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVE----EGRNLFDTMKHNYN 561
A EA + ++MR P + ++L +C G VE R LF N
Sbjct: 435 ANR--LDEAAKMVQDMR---TEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAG 489
Query: 562 INPEIEHYSCMVDLYARA 579
+Y + D+YA A
Sbjct: 490 ------NYVLLADIYAEA 501
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 58/258 (22%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L +G+++H + G +S + L+ Y+R GC+D A+ +F MP N SW+ +I
Sbjct: 198 LMKGKEIHAHLTRRG-YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIA 256
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYS----------------------------------- 96
+ +G E+LR F M +T S
Sbjct: 257 CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 97 ------WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
+ LV+ + + G L++ +FD M ++ + WN++I Y G+ +KA+ +F+
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEE 376
Query: 151 M-----SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCS 204
M S P+ V +VLGAC+ + GK++ + + GI+ + + C
Sbjct: 377 MLANGASPTPVTFV--------SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC- 427
Query: 205 SLVKFYGKCGDLDSAARV 222
+V G+ LD AA++
Sbjct: 428 -MVDLLGRANRLDEAAKM 444
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 155/435 (35%), Positives = 245/435 (56%), Gaps = 10/435 (2%)
Query: 240 GYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVST 299
YA+ GK+R + +F +D L+ + I+ +NG + +A L+ ++ ++ + T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
+++L + CS +L+ H H K G+ D VA+ L+D Y+K A K F +
Sbjct: 133 FSSLLKS-CSTKSGKLI---HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
+ MIT Y+ G +E A+ +FD+M + ++SWN ++ G A++ P++A+ +F +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 420 MNML-DLKMDKFSFASVISACASKSCLELGE--QVFGKAITVGLEFDHIISTSLVDFYCK 476
+ K D+ + + +SAC+ LE G VF K+ + L + T L+D Y K
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK--VCTGLIDMYSK 306
Query: 477 CGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMR-CSGVRPSAITFTA 535
CG +E VF+ + D V+WN ++ GYA +GY +AL LF EM+ +G++P+ ITF
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 536 VLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQ 595
L AC H GLV EG +F++M Y I P+IEHY C+V L RAG L A + I+ M
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 596 ADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVR 655
AD+ +W SVL C HG+ +GK AE +I L+ +N G Y+ LSN+ A+ D+EG A+VR
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVR 486
Query: 656 ELMIDKNVQKIPGCS 670
LM +K + K PG S
Sbjct: 487 NLMKEKGIVKEPGIS 501
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 172/402 (42%), Gaps = 42/402 (10%)
Query: 30 SSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNA--FSWNTLIEAHLHSGHRNESLRLFH 87
S+ TA L + L D +Q DE+ Q +A N L LH + +L+L
Sbjct: 17 STTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLL----LHPRYPVLNLKLHR 72
Query: 88 AMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
A +A G ++ + +LF + ++ I+ S G +A L
Sbjct: 73 A---------------YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLL 117
Query: 148 FKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCS 204
+ + ++P E +++L +C+ GK +H V+ G L D + +
Sbjct: 118 YVQLLSSEINPNEFT------FSSLLKSCST----KSGKLIHTHVLKFG--LGIDPYVAT 165
Query: 205 SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL 264
LV Y K GD+ SA +V + E S +A+++ YA G + AR +FDS ++ V
Sbjct: 166 GLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVS 225
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
WN +I GY +G +AL LF+++ G D TV LSA + +E + +H
Sbjct: 226 WNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV 285
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAK 383
+ ++ V + L+D YSK EA F + D + N MI Y+ G +DA
Sbjct: 286 KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDAL 345
Query: 384 WIFDTMS-----SKTLISWNSILVGLAKNACPSEAIDIFCRM 420
+F+ M T I++ L A +E I IF M
Sbjct: 346 RLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 111/227 (48%), Gaps = 20/227 (8%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L GR +HV F+K+ + ++ L+ YS+ G L++A +F++ P+ + +WN +I
Sbjct: 275 LETGRWIHV-FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Query: 72 AHLHSGHRNESLRLFHAMP-----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
+ G+ ++LRLF+ M + T ++ + A A +G + +F+SM + G+
Sbjct: 334 GYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
+ ++ + G ++A K M++D D+ + ++VLG+C
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD------ADSVLWSSVLGSCKLHGDFVL 447
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
GK++ +I I+ VL S++ Y GD + A+V ++KE
Sbjct: 448 GKEIAEYLIGLNIKNSGIYVLLSNI---YASVGDYEGVAKVRNLMKE 491
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 181/657 (27%), Positives = 304/657 (46%), Gaps = 79/657 (12%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ-----TNAFSWNTLIEAHLHSGHRNES 82
+ S + N L+ YS+ D ++F + ++F++ +I+A+ G R
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG-REFL 125
Query: 83 LRLFHAMPEKTHYSWNMLVSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSK 137
R+ H + K+ Y +++V++ +AK + + +FD MP ++ WNT+I + +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 138 RGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE 197
G KAL LF M E ++ L + AC+ L GK++H + + +G EL
Sbjct: 186 SGEAEKALELFGRMESSGFEP---NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL- 241
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSR 257
D++ SALV Y + AR VF
Sbjct: 242 --------------------------------DEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 258 VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVK 317
+ V WNS+I GYV G+ + + RM G +T+ +IL A + K
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 318 QMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCG 377
+H + + V DI V +L+D Y K CG
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFK-------------------------------CG 358
Query: 378 RIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVIS 437
A+ +F SWN ++ +A++++ +M + +K D +F SV+
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 438 ACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVS 497
AC+ + LE G+Q+ LE D ++ ++L+D Y KCG + ++F+ + K D VS
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK 557
W ++ Y ++G EAL F EM+ G++P +T AVLSAC H GL++EG F M+
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 558 HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQAD-ANMWFSVLRGCIAHGNRTI 616
Y I P IEHYSCM+D+ RAG L EA ++I++ P +D A + ++ C H ++
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSL 598
Query: 617 GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
G A +++ P++ Y+ L N+ A+ E W+ + +VR M + ++K PGCSW +
Sbjct: 599 GDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 171/414 (41%), Gaps = 76/414 (18%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GR +H +K+G + + A+ L+ Y++ +++ Q+FDEMP+ + SWNT+I
Sbjct: 126 GRMIHTLVVKSGYV-CDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 75 HSGHRNESLRLFHAMP---------------------------------------EKTHY 95
SG ++L LF M E Y
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
+ LV + K L++A +F MP K+ + WN++I GY +G + + + M
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM---I 301
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
+E L ++L AC+ L GK +H VI + D + SL+ Y KCG+
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA--DIYVNCSLIDLYFKCGE 359
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
AN A VF A WN +IS Y+
Sbjct: 360 --------------------------ANL-----AETVFSKTQKDVAESWNVMISSYISV 388
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVA 335
G +A+ ++ +M GV DV T ++L A L +E KQ+H + + D ++
Sbjct: 389 GNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL 448
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
SALLD YSK EA + F + D + MI+ Y + G+ +A + FD M
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 132/255 (51%), Gaps = 6/255 (2%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKT-LISWNSILVGLAKNACPSEAIDIFCR- 419
D +L ++I VY C A+ +F+ ++ + WNS++ G +KN+ + +++F R
Sbjct: 38 DVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRL 97
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
+N D F+F +VI A + LG + + G D ++++SLV Y K
Sbjct: 98 LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL 157
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
E +VFD M + D SWNT++ + +G +AL LF M SG P++++ T +SA
Sbjct: 158 FENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISA 217
Query: 540 CDHTGLVEEGRNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
C +E G+ + +K + ++ + S +VD+Y + CL A ++ ++MP +
Sbjct: 218 CSRLLWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAREVFQKMP-RKSL 274
Query: 599 NMWFSVLRGCIAHGN 613
W S+++G +A G+
Sbjct: 275 VAWNSMIKGYVAKGD 289
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 160/361 (44%), Gaps = 66/361 (18%)
Query: 12 LREGRQLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
L G+++H +K G L+ + +A L+ Y + CL+ A ++F +MP+ + +WN++I
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSA--LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 71 EAHLHSGHRNESLRLFHAM------PEKT---------HYSWNM---------------- 99
+ ++ G + + + M P +T S N+
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 100 --------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
L+ + K G+ LA ++F WN +I Y G+ KA+ ++ M
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 152 ---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+ P D +VL AC+ AL GKQ+H + + LE D++L S+L+
Sbjct: 402 VSVGVKP------DVVTFTSVLPACSQLAALEKGKQIH--LSISESRLETDELLLSALLD 453
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS------RVDQCA 262
Y KCG+ A R+ + + D S + ++S Y + G+ REA FD + D
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMR-RHGVSGDV---STVANILS-AGCSLLVVELVK 317
+L +++S G E L F +MR ++G+ + S + +IL AG L E+++
Sbjct: 514 LL--AVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
Query: 318 Q 318
Q
Sbjct: 572 Q 572
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 427 MDKFSFASVISACA-SKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRK 485
M+ S++ C S L + V + +T+GL D ++ SL++ Y C R
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 486 VFDGM-IKTDEVSWNTILMGYATNGYGSEALTLF-REMRCSGVRPSAITFTAVLSACDHT 543
VF+ I++D WN+++ GY+ N + L +F R + CS P + TF V+ A +
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YG 118
Query: 544 GLVEEGRNLFDTMKHNYNINP----EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
L GR M H + ++ S +V +YA+ ++ + +EMP + D
Sbjct: 119 AL---GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVA 174
Query: 600 MWFSVL 605
W +V+
Sbjct: 175 SWNTVI 180
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 292/615 (47%), Gaps = 107/615 (17%)
Query: 65 SWNTLIEAHLHSGHRNESLRLFHAMPEKTH-YSWNMLVSAFAKSGDLQLAHSLFDSMPCK 123
S + L+ H+ +N + LF+ +KT +SWN +++ A+SGD A F SM
Sbjct: 12 SVSRLLHTERHTERQNLTT-LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM--- 67
Query: 124 NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGK 183
+ LSL+ T S P + AC+ F + GK
Sbjct: 68 -------------------RKLSLYPTRSSFP------------CAIKACSSLFDIFSGK 96
Query: 184 QVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYAN 243
Q H + V G + D F SAL+ Y+
Sbjct: 97 QTHQQAFVFGYQ---------------------------------SDIFVSSALIVMYST 123
Query: 244 AGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM------RRHGVSGDV 297
GK+ +AR+VFD + V W S+I GY LNG ++A++LFK + + D
Sbjct: 124 CGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
Query: 298 STVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSK--SQGPHEACKFF 355
+ +++SA + L + +H+ K G + V + LLDAY+K G A K F
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAID 415
++ D + N++++VY+ G +A +F + ++++N+I
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI--------------- 288
Query: 416 IFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYC 475
+ ++V+ A + L +G+ + + I +GLE D I+ TS++D YC
Sbjct: 289 ---------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 476 KCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTA 535
KCG VE RK FD M + SW ++ GY +G+ ++AL LF M SGVRP+ ITF +
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 536 VLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQ 595
VL+AC H GL EG F+ MK + + P +EHY CMVDL RAG L +A DLI+ M +
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 596 ADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVR 655
D+ +W S+L C H N + +++ ++ +LD N G Y+ LS++ A + W+ +VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 656 ELMIDKNVQKIPGCS 670
+M ++ + K PG S
Sbjct: 514 MIMKNRGLVKPPGFS 528
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 178/406 (43%), Gaps = 87/406 (21%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q H G S + ++ L+ YS G L+DA ++FDE+P+ N SW ++I +
Sbjct: 95 GKQTHQQAFVFG-YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 75 HSGHRNESLRLF---------------------------------HAMPEKTH------- 94
+G+ +++ LF + E H
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 95 -----YSWNMLVSAFAKSGD--LQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
N L+ A+AK G+ + +A +FD + K+ + +N+I+ Y++ G +A +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F+ + + ++V +A L+TVL A + AL GK +H +VI G LE D ++ +S++
Sbjct: 274 FRRLVKN--KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG--LEDDVIVGTSII 329
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
Y KCG +++A R+ FD ++ W +
Sbjct: 330 DMYCKCGRVETA-------------------------------RKAFDRMKNKNVRSWTA 358
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL--LVVELVKQMHAHACK 325
+I+GY ++G +AL LF M GV + T ++L+A CS L VE + +A +
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA-CSHAGLHVEGWRWFNAMKGR 417
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY-DTILLNTMI 370
GV + ++D ++ +A +K D+I+ ++++
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/597 (27%), Positives = 291/597 (48%), Gaps = 52/597 (8%)
Query: 77 GHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYS 136
G NE+ + F ++ K SWN +VS + +G + A LFD M +N + WN ++ GY
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 137 KRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIEL 196
K +A ++F+ M
Sbjct: 91 KNRMIVEARNVFELMP-------------------------------------------- 106
Query: 197 EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS 256
E + V +++VK Y + G + A + + E ++ S + + G + G++ +AR+++D
Sbjct: 107 ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDM 166
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV 316
+ V ++I G G EA +F MR +V T +++ V++
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVA 222
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
+++ ++ V +++L Y+ S +A +FF + I N MI +
Sbjct: 223 RKLF----EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEV 278
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
G I A+ +FD M + +W ++ + EA+D+F +M ++ S S++
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
S CA+ + L+ G QV + + D +++ L+ Y KCG + + VFD D +
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
WN+I+ GYA++G G EAL +F EM SG P+ +T A+L+AC + G +EEG +F++M
Sbjct: 399 MWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTI 616
+ + + P +EHYSC VD+ RAG + +A++LIE M + DA +W ++L C H +
Sbjct: 459 ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDL 518
Query: 617 GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
++AA+K+ + +P+N G Y+ LS++ A+ W A VR+ M NV K PGCSW +
Sbjct: 519 AEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 223/502 (44%), Gaps = 81/502 (16%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHY 95
N ++ Y G +A QLFDEM + N SWN L+ ++ + E+ +F MPE+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
SW +V + + G + A SLF MP +N + W + G G KA L+ M P
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM---P 168
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
++ V ++ G C + G+ AR+I + + E + V ++++ Y +
Sbjct: 169 VKDVVASTNMIG---GLCRE------GRVDEARLIFDEMR-ERNVVTWTTMITGYRQNNR 218
Query: 216 LDSAAR---------------------VAGVVKEVDDF----------SLSALVSGYANA 244
+D A + ++G +++ ++F + +A++ G+
Sbjct: 219 VDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEV 278
Query: 245 GKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANIL 304
G++ +ARRVFD D+ W +I Y G E+EAL LF +M++ GV ++ +IL
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 305 SAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTI 364
S +L ++ +Q+HAH + D+ VAS L+
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM------------------------- 373
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD 424
T+Y CG + AK +FD SSK +I WNSI+ G A + EA+ IF M
Sbjct: 374 ------TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG 427
Query: 425 LKMDKFSFASVISACASKSCLELGEQVF---GKAITVGLEFDHIISTSLVDFYCKCGFVE 481
+K + ++++AC+ LE G ++F V +H T VD + G V+
Sbjct: 428 TMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCT--VDMLGRAGQVD 485
Query: 482 IGRKVFDGM-IKTDEVSWNTIL 502
++ + M IK D W +L
Sbjct: 486 KAMELIESMTIKPDATVWGALL 507
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWN 67
IG REGR + + ++ T ++ Y + +D A +LF+ MP+ SW
Sbjct: 179 IGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWT 238
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV 127
+++ + SG ++ F MP K + N ++ F + G++ A +FD M ++
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT 298
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA 187
W +I Y ++G +AL LF M + V L ++L CA +L G+QVHA
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQ---KQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 188 RVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKM 247
++ + + D + S L+ Y KCG+L A V D ++++SGYA+ G
Sbjct: 356 HLV--RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 248 REARRVF 254
EA ++F
Sbjct: 414 EEALKIF 420
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 196/699 (28%), Positives = 316/699 (45%), Gaps = 112/699 (16%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
LR G+ + +K G + + TA ++ Y++ G + +A ++F +P + SW ++
Sbjct: 267 LRFGKVVQARVIKCGAEDVFVCTA--IVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLS 324
Query: 72 AHLHSGHRNESLRLF----------------------------------HAMPEKTHYSW 97
+ S +L +F HA K+ +
Sbjct: 325 GYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL 384
Query: 98 N-----MLVSAFAKSGDLQLAHSLFDSMP-CKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
+ L+S ++KSGD+ L+ +F+ + + + N +I +S+ P KA+ LF M
Sbjct: 385 DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRM 444
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
+ L L +VL DC LN GKQVH + G+ L D + SSL Y
Sbjct: 445 LQEGLRTDEFSVCSLLSVL----DC--LNLGKQVHGYTLKSGLVL--DLTVGSSLFTLYS 496
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
KCG L+ E+ ++F + W S+ISG
Sbjct: 497 KCGSLE-------------------------------ESYKLFQGIPFKDNACWASMISG 525
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
+ G EA+ LF M G S D ST+A +L+ S + K++H + + G+
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
+ + SAL++ YSK CG ++ A+ ++D +
Sbjct: 586 MDLGSALVNMYSK-------------------------------CGSLKLARQVYDRLPE 614
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
+S +S++ G +++ + +F M M MD F+ +S++ A A LG QV
Sbjct: 615 LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQV 674
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG 511
+GL + + +SL+ Y K G ++ K F + D ++W ++ YA +G
Sbjct: 675 HAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKA 734
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
+EAL ++ M+ G +P +TF VLSAC H GLVEE ++M +Y I PE HY C
Sbjct: 735 NEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVC 794
Query: 572 MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
MVD R+G L EA I M + DA +W ++L C HG +GK+AA+K I+L+P +
Sbjct: 795 MVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSD 854
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
GAYI LSN+LA +W+ + R+LM VQK PG S
Sbjct: 855 AGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 175/647 (27%), Positives = 266/647 (41%), Gaps = 125/647 (19%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
LR + L L+ +L + LL +YS G + DA +LFD +PQ + S N +I
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 72 AHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSA------------------------ 103
+ ESLR F M E S+ ++SA
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 104 -----------FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
F+K+ + A+ +F N WNTII G + + LF M
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
+ D+ ++VL ACA L GK V ARVI G E D +C+++V Y K
Sbjct: 244 VG---FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE---DVFVCTAIVDLYAK 297
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
C G M EA VF + V W ++SGY
Sbjct: 298 C-------------------------------GHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
+ + AL +FK MR GV + TV +++SA +V Q+HA K G D
Sbjct: 327 TKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS 386
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF---DTM 389
VA+AL+ YSKS G I+ ++ +F D +
Sbjct: 387 SVAAALISMYSKS-------------------------------GDIDLSEQVFEDLDDI 415
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGE 449
+ ++ N ++ +++ P +AI +F RM L+ D+FS S++S CL LG+
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGK 470
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNG 509
QV G + GL D + +SL Y KCG +E K+F G+ D W +++ G+ G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH- 568
Y EA+ LF EM G P T AVL+ C + G+ + H Y + I+
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-----HGYTLRAGIDKG 585
Query: 569 ---YSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
S +V++Y++ G L A + + +P + D S++ G HG
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHG 631
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 282/582 (48%), Gaps = 80/582 (13%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKA-LSLFKTMSLDPL 156
N L+ + GD + LF N +N +I G + + +A LSL++ M L
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
+ D V ACA + G+ VH+ + G LE D + SL+ Y KCG +
Sbjct: 129 K---PDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVG--LERDVHINHSLIMMYAKCGQV 183
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
GYA R++FD ++ V WNS+ISGY G
Sbjct: 184 -----------------------GYA--------RKLFDEITERDTVSWNSMISGYSEAG 212
Query: 277 EEMEALALFKRMRRHGVSGDVSTVANILSAGCS----LLVVELVKQMHAHACKIGVTHDI 332
+A+ LF++M G D T+ ++L A CS L L+++M A KIG++
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGA-CSHLGDLRTGRLLEEM-AITKKIGLS--- 267
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
T L + +I++Y CG ++ A+ +F+ M K
Sbjct: 268 ------------------------------TFLGSKLISMYGKCGDLDSARRVFNQMIKK 297
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
++W +++ ++N SEA +F M + D + ++V+SAC S LELG+Q+
Sbjct: 298 DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIE 357
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGS 512
A + L+ + ++T LVD Y KCG VE +VF+ M +E +WN ++ YA G+
Sbjct: 358 THASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAK 417
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
EAL LF M V PS ITF VLSAC H GLV +G F M + + P+IEHY+ +
Sbjct: 418 EALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNI 474
Query: 573 VDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQL-DPEN 631
+DL +RAG L EA + +E P + D M ++L C + I + A ++++ + +N
Sbjct: 475 IDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKN 534
Query: 632 PGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
G Y+ SNVLA + W+ SA++R LM D+ V K PGCSW +
Sbjct: 535 AGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 576
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 183/400 (45%), Gaps = 70/400 (17%)
Query: 85 LFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKA 144
LF E+ + + L+ +AK G + A LFD + ++ + WN++I GYS+ G+ + A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 145 LSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCS 204
+ LF+ M + E D L ++LGAC+ L G+ + I + I L L S
Sbjct: 218 MDLFRKMEEEGFE---PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL--STFLGS 272
Query: 205 SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL 264
L+ YGKCGDLDS ARRVF+ + + V
Sbjct: 273 KLISMYGKCGDLDS-------------------------------ARRVFNQMIKKDRVA 301
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHAC 324
W ++I+ Y NG+ EA LF M + GVS D T++ +LSA S+ +EL KQ+ HA
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKW 384
++ + H+I VA+ L+D Y K EA + F + + N MIT Y++ G ++A
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALL 421
Query: 385 IFDTMS-SKTLISWNSIL-----VGLAKNACP------------------SEAIDIFCRM 420
+FD MS + I++ +L GL C + ID+ R
Sbjct: 422 LFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 421 NMLDL----------KMDKFSFASVISACASKSCLELGEQ 450
MLD K D+ A+++ AC + + + E+
Sbjct: 482 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREK 521
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 292/581 (50%), Gaps = 14/581 (2%)
Query: 101 VSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVH 160
+++ AKSG + A +FD MP + + WNT++ YS+ G ++A++LF + +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP-- 68
Query: 161 CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
D +L CA + G+++ + VI G + +SL+ YGKC D SA
Sbjct: 69 -DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLP--VNNSLIDMYGKCSDTLSAN 125
Query: 221 RVAG--VVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEE 278
+V ++ + +L+ Y NA + A VF + A WN +ISG+ G+
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV--KQMHAHACKIGVTHDIVVAS 336
L+LFK M D T +++++A CS +V + +HA K G + + +
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNA-CSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 337 ALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS 396
++L Y+K +A + ++ + N++I G E A +F K +++
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
W +++ G +N +A+ F M + D F++ +V+ AC+ + L G+ + G I
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALT 516
G + + +LV+ Y KCG ++ + F + D VSWNT+L + +G +AL
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 517 LFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLY 576
L+ M SG++P +TF +L+ C H+GLVEEG +F++M +Y I E++H +CM+D++
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 577 ARAGCLGEAIDLIEE----MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENP 632
R G L EA DL + ++ + W ++L C H + +G+ ++ + +P
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEE 544
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+++ LSN+ ++ W+ VR M+++ ++K PGCSW +
Sbjct: 545 MSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIE 585
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 176/390 (45%), Gaps = 43/390 (11%)
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV 293
L++ ++ A +G++ AR+VFD + V WN++++ Y G EA+ALF ++R
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 294 SGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACK 353
D + ILS SL V+ +++ + + G + V ++L+D Y K A K
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 354 FFGEL--KAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
F ++ + + + +++ Y N + E A +F M + +WN ++ G A
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISACAS--------------------KSCLELGEQV 451
+ +F M + K D ++F+S+++AC++ S +E V
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 452 FGKAITVG--------LEFDHIIS----TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWN 499
+G LE +++ S++D K G E +VF + + V+W
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 500 TILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHN 559
T++ GY NG G +AL F EM SGV + AVL AC L+ G+ M H
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK-----MIHG 361
Query: 560 YNINPEIEHYS----CMVDLYARAGCLGEA 585
I+ + Y+ +V+LYA+ G + EA
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 214/508 (42%), Gaps = 81/508 (15%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEM--PQTNAFSWNTL 69
++ GR++ +++G +SL N L+ Y + A ++F +M N +W +L
Sbjct: 86 VKFGRKIQSLVIRSGFC-ASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
+ A++++ +L +F MP++ ++WN+++S A G L+ SLF M
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM--------- 195
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC-ADCFALNCGKQVHAR 188
S FK D ++++ AC AD + G+ VHA
Sbjct: 196 --------------LESEFKP-----------DCYTFSSLMNACSADSSNVVYGRMVHAV 230
Query: 189 VIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMR 248
++ G + +S++ FY K G D A R ++ + S ++++ G+
Sbjct: 231 MLKNGWSSAVEAK--NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 249 EARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
+A VF ++ V W ++I+GY NG+ +AL F M + GV D +L A
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 348
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT 368
L ++ K +H G V +AL++ Y+K EA + FG++ D + NT
Sbjct: 349 GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNT 408
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
M+ + G + A ++D M + +K D
Sbjct: 409 MLFAFGVHGLADQALKLYDNMIAS-------------------------------GIKPD 437
Query: 429 KFSFASVISACASKSCLELGEQVFG---KAITVGLEFDHIISTSLVDFYCKCGFVEIGRK 485
+F +++ C+ +E G +F K + LE DH+ T ++D + + G + +
Sbjct: 438 NVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV--TCMIDMFGRGGHLAEAKD 495
Query: 486 V---FDGMI--KTDEVSWNTILMGYATN 508
+ + ++ ++ SW T+L +T+
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACSTH 523
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 42/302 (13%)
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
+ L + I + GRI A+ +FD M ++WN++L ++ EAI +F ++
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
D K D +SF +++S CAS ++ G ++ I G ++ SL+D Y KC
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 484 RKVFDGMI---------------------------------KTDEVSWNTILMGYATNGY 510
KVF M K +WN ++ G+A G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 511 GSEALTLFREMRCSGVRPSAITFTAVLSAC--DHTGLVEEGRNLFDTMKHNYNINPEIEH 568
L+LF+EM S +P TF+++++AC D + +V GR + M N + +E
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVV-YGRMVHAVMLKN-GWSSAVEA 242
Query: 569 YSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLD 628
+ ++ Y + G +A+ +E + + W S++ C+ G A ++ L
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACMKIGETE----KALEVFHLA 297
Query: 629 PE 630
PE
Sbjct: 298 PE 299
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 192/674 (28%), Positives = 321/674 (47%), Gaps = 107/674 (15%)
Query: 23 LKTGILNSSLTTANRLLQFYSRRGCLDDATQLFD-----EMPQT------------NAFS 65
L I +S+ T +R+L+ + G L +A ++ + E+P T FS
Sbjct: 18 LTPSISSSAPTKQSRILEL-CKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFS 76
Query: 66 WNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGD-LQLAHSLFDSMPCKN 124
+ I+ H H + + E N L+S + K G ++ +FD K+
Sbjct: 77 FIHGIQFHAH---------VVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKD 127
Query: 125 GLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNC 181
+ W +++ GY KAL +F M LD E L++ + AC++ +
Sbjct: 128 AISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFT------LSSAVKACSELGEVRL 181
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGY 241
G+ H VI G E++ + S+L YG V +E D
Sbjct: 182 GRCFHGVVITHG--FEWNHFISSTLAYLYG-------------VNREPVD---------- 216
Query: 242 ANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR-HGVSGDVSTV 300
ARRVFD + + W +++S + N EAL LF M R G+ D ST
Sbjct: 217 --------ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTF 268
Query: 301 ANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA 360
+L+A +L ++ K++H G+ ++VV S+LLD Y K
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGK---------------- 312
Query: 361 YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
CG + +A+ +F+ MS K +SW+++L G +N +AI+IF M
Sbjct: 313 ---------------CGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
DL + F +V+ ACA + + LG+++ G+ + G + I+ ++L+D Y K G +
Sbjct: 358 EEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
+ +V+ M + ++WN +L A NG G EA++ F +M G++P I+F A+L+AC
Sbjct: 414 DSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
Query: 541 DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM 600
HTG+V+EGRN F M +Y I P EHYSCM+DL RAG EA +L+E + DA++
Sbjct: 474 GHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASL 533
Query: 601 WFSVLRGCIAHGNRT-IGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMI 659
W +L C A+ + + + + A+++++L+P+ +Y+ LSN+ + +R+LM+
Sbjct: 534 WGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMV 593
Query: 660 DKNVQKIPGCSWAD 673
+ V K G SW D
Sbjct: 594 RRGVAKTVGQSWID 607
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/542 (23%), Positives = 210/542 (38%), Gaps = 125/542 (23%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGC-LDDATQLFDEMPQTNAFSWNTLIEAH 73
G Q H +K+G L + N LL Y + G + + ++FD +A SW +++ +
Sbjct: 80 GIQFHAHVVKSG-LETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGY 138
Query: 74 LHSGHRNESL----------------------------------RLFHAMPEKTHYSWNM 99
+ ++L R FH + + WN
Sbjct: 139 VTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNH 198
Query: 100 LVSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM--- 151
+S+ + + + A +FD MP + + W ++ +SK +AL LF M
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 152 -SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
L P D TVL AC + L GK++H ++I GI + V+ SSL+ Y
Sbjct: 259 KGLVP------DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI--GSNVVVESSLLDMY 310
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
GKCG + A +V + + + S SAL+ GY
Sbjct: 311 GKCGSVREARQVFNGMSKKNSVSWSALLGGYCQ--------------------------- 343
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
NGE +A+ +F+ M D+ +L A L V L K++H + G
Sbjct: 344 ----NGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
+++V SAL+D Y KS G I+ A ++ MS
Sbjct: 396 NVIVESALIDLYGKS-------------------------------GCIDSASRVYSKMS 424
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
+ +I+WN++L LA+N EA+ F M +K D SF ++++AC ++ G
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Query: 451 VF---GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFD-GMIKTDEVSWNTILMGYA 506
F K+ + +H + ++D + G E + + + D W +L A
Sbjct: 485 YFVLMAKSYGIKPGTEHY--SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Query: 507 TN 508
N
Sbjct: 543 AN 544
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 53/332 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R L++G+++H + GI S++ + LL Y + G + +A Q+F+ M + N+ SW+ L
Sbjct: 279 RRLKQGKEIHGKLITNGI-GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSA-------------------------- 103
+ + +G +++ +F M EK Y + ++ A
Sbjct: 338 LGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNV 397
Query: 104 ---------FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
+ KSG + A ++ M +N + WN ++ ++ G +A+S F M
Sbjct: 398 IVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKK 457
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSSLVKFYGKC 213
++ D +L AC ++ G+ + GI+ + C ++ G+
Sbjct: 458 GIKP---DYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSC--MIDLLGRA 512
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSG--YANAGKMREARRV------FDSRVDQCAVLW 265
G + A + + +D SL ++ G ANA R A R+ + + VL
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDV 297
+++ Y G +AL + K M R GV+ V
Sbjct: 573 SNM---YKAIGRHGDALNIRKLMVRRGVAKTV 601
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 185/588 (31%), Positives = 284/588 (48%), Gaps = 92/588 (15%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKR----------GHPRKALSL 147
N L+ A+ K + A LFD MP +N + WN +IHG +R G + L
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F +SLD + + ++ C D + G Q+H ++ +G LE +SLV
Sbjct: 135 FTDVSLDHVSFM--------GLIRLCTDSTNMKAGIQLHCLMVKQG--LESSCFPSTSLV 184
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
FYGKCG + EARRVF++ +D+ VLWN+
Sbjct: 185 HFYGKCG-------------------------------LIVEARRVFEAVLDRDLVLWNA 213
Query: 268 IISGYVLNGEEMEALALFKRM--RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
++S YVLNG EA L K M ++ GD T +++LSA C +E KQ+HA K
Sbjct: 214 LVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA-CR---IEQGKQIHAILFK 269
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWI 385
+ DI VA+ALL+ Y+KS + DA+
Sbjct: 270 VSYQFDIPVATALLNMYAKS-------------------------------NHLSDAREC 298
Query: 386 FDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCL 445
F++M + ++SWN+++VG A+N EA+ +F +M + +L+ D+ +FASV+S+CA S +
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Query: 446 ELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGY 505
+QV G ++ SL+ Y + G + F + + D VSW +++
Sbjct: 359 WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGAL 418
Query: 506 ATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPE 565
A++G+ E+L +F M ++P ITF VLSAC H GLV+EG F M Y I E
Sbjct: 419 ASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAE 477
Query: 566 IEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKII 625
EHY+C++DL RAG + EA D++ MP + + + GC H R K A+K++
Sbjct: 478 DEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLL 537
Query: 626 QLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNV--QKIPGCSW 671
+++P P Y LSN + W +A +R+ +N K PGCSW
Sbjct: 538 EIEPTKPVNYSILSNAYVSEGHWNQAALLRKRE-RRNCYNPKTPGCSW 584
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 216/524 (41%), Gaps = 116/524 (22%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI- 70
L + +Q H +K GI NS L N+LLQ Y++ DDA +LFDEMP N +WN LI
Sbjct: 52 LSDVKQEHGFMVKQGIYNS-LFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIH 110
Query: 71 -----------EAHL----------------------------HSGHRNESLRLFHAMP- 90
AHL S + ++L M
Sbjct: 111 GVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVK 170
Query: 91 ---EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
E + + LV + K G + A +F+++ ++ ++WN ++ Y G +A L
Sbjct: 171 QGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGL 230
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
K M D D +++L AC + GKQ+HA I+ + +FD + ++L+
Sbjct: 231 LKLMGSDK-NRFRGDYFTFSSLLSAC----RIEQGKQIHA--ILFKVSYQFDIPVATALL 283
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
Y K L +AR F+S V + V WN+
Sbjct: 284 NMYAKSNHLS-------------------------------DARECFESMVVRNVVSWNA 312
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
+I G+ NGE EA+ LF +M + D T A++LS+ + +KQ+ A K G
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFD 387
+ VA++L+ +YS++ G + +A F
Sbjct: 373 SADFLSVANSLISSYSRN-------------------------------GNLSEALLCFH 401
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
++ L+SW S++ LA + E++ +F M + L+ DK +F V+SAC+ ++
Sbjct: 402 SIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQE 460
Query: 448 GEQVFGKAITV-GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
G + F + +E + T L+D + GF++ V + M
Sbjct: 461 GLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 161/340 (47%), Gaps = 28/340 (8%)
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILL-NTMITVYSNCGRIEDAKWIFDTMSSKTL 394
SA LD S + H F + Y+++ L N ++ Y+ +DA +FD M + +
Sbjct: 46 SASLDHLSDVKQEH---GFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNI 102
Query: 395 ISWNSILVGLAKNACPS--EAIDIFC---RMNMLDLKMDKFSFASVISACASKSCLELGE 449
++WN ++ G+ + + A FC R+ D+ +D SF +I C + ++ G
Sbjct: 103 VTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNG 509
Q+ + GLE STSLV FY KCG + R+VF+ ++ D V WN ++ Y NG
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
Query: 510 YGSEALTLFREMRC--SGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM-KHNYNINPEI 566
EA L + M + R TF+++LSAC +E+G+ + + K +Y + +
Sbjct: 223 MIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPV 278
Query: 567 EHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN-----RTIGKMAA 621
+ ++++YA++ L +A + E M + + W +++ G +G R G+M
Sbjct: 279 A--TALLNMYAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLL 335
Query: 622 EKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDK 661
E L P+ LS+ S WE QV+ ++ K
Sbjct: 336 E---NLQPDELTFASVLSSCAKFSAIWE-IKQVQAMVTKK 371
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 46/318 (14%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
++ G QLH +K G L SS + L+ FY + G + +A ++F+ + + WN L+
Sbjct: 157 NMKAGIQLHCLMVKQG-LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALV 215
Query: 71 EAHLHSGHRNESLRLF--------------------------------HAMPEKTHYSWN 98
+++ +G +E+ L HA+ K Y ++
Sbjct: 216 SSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFD 275
Query: 99 M-----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
+ L++ +AKS L A F+SM +N + WN +I G+++ G R+A+ LF M L
Sbjct: 276 IPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLL 335
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
+ L+ D A+VL +CA A+ KQV A V +G +F V +SL+ Y +
Sbjct: 336 ENLQ---PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG-SADFLSV-ANSLISSYSRN 390
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC---AVLWNSIIS 270
G+L A ++E D S ++++ A+ G E+ ++F+S + + + + ++S
Sbjct: 391 GNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLS 450
Query: 271 GYVLNGEEMEALALFKRM 288
G E L FKRM
Sbjct: 451 ACSHGGLVQEGLRCFKRM 468
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 189/655 (28%), Positives = 333/655 (50%), Gaps = 43/655 (6%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GRQ+H LK+G L+S+ N +L Y++ L DA +F + + ++ S+N +++ ++
Sbjct: 60 GRQIHCRVLKSG-LDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYV 118
Query: 75 HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHG 134
S RL+ A+ LFD MP ++ + + T+I G
Sbjct: 119 RSR------RLWDAL-------------------------KLFDVMPERSCVSYTTLIKG 147
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI 194
Y++ +A+ LF+ M + + + LATV+ AC+ + + + + I +
Sbjct: 148 YAQNNQWSEAMELFREMRNLGIML---NEVTLATVISACSHLGGIWDCRMLQSLAI--KL 202
Query: 195 ELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
+LE + ++L+ Y C L A ++ + E + + + +++GY+ AG + +A +F
Sbjct: 203 KLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELF 262
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVE 314
D ++ V W ++I G + + EAL + M R G+ + ++LSA +
Sbjct: 263 DQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSS 322
Query: 315 LVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL-LNTMITVY 373
Q+H K G + + ++ Y+ S A + F E D I N +I +
Sbjct: 323 KGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF-EASVKDHIASRNALIAGF 381
Query: 374 SNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM-NMLDLKMDKFSF 432
G +E A+ +FD K + SWN+++ G A++ P A+ +F M + +K D +
Sbjct: 382 VKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITM 441
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-- 490
SV SA +S LE G++ + + ++ +++D Y KCG +E +F
Sbjct: 442 VSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKN 501
Query: 491 IKTDEVS-WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
I + +S WN I+ G AT+G+ AL L+ +++ ++P++ITF VLSAC H GLVE G
Sbjct: 502 ISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG 561
Query: 550 RNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCI 609
+ F++MK ++ I P+I+HY CMVDL +AG L EA ++I++MP +AD +W +L
Sbjct: 562 KTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASR 621
Query: 610 AHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQ 664
HGN I ++AA ++ +DP + G + LSNV A + WE A VRE M ++V+
Sbjct: 622 THGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 229/482 (47%), Gaps = 37/482 (7%)
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
L + LG+CA + CG+Q+H RV+ G L+ + +C+S++ Y KC L A V
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSG--LDSNGYICNSVLNMYAKCRLLADAESVFRD 101
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
++D S + +V GY + ++ +A ++FD ++ V + ++I GY N + EA+ LF
Sbjct: 102 HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 161
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
+ MR G+ + T+A ++SA L + + + + A K+ + + V++ LL Y
Sbjct: 162 REMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
+A K F E+ + + N M+ YS G IE A+ +FD ++ K ++SW +++ G
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 281
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
+ EA+ + M +K + ++SA A G Q+ G + G +
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 341
Query: 466 ISTSLVDFYC-------------------------------KCGFVEIGRKVFDGMIKTD 494
+ +++ FY K G VE R+VFD D
Sbjct: 342 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 401
Query: 495 EVSWNTILMGYATNGYGSEALTLFREM-RCSGVRPSAITFTAVLSACDHTGLVEEGRNLF 553
SWN ++ GYA + AL LFREM S V+P AIT +V SA G +EEG+
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 554 DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM--WFSVLRGCIAH 611
D + + I P + ++D+YA+ G + A+++ + + + + W +++ G H
Sbjct: 462 DYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 612 GN 613
G+
Sbjct: 521 GH 522
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC------------- 477
+ S + +CAS + + G Q+ + + GL+ + I S+++ Y KC
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 478 -------------GFVEIGR-----KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
G+V R K+FD M + VS+ T++ GYA N SEA+ LFR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
EMR G+ + +T V+SAC H G + + R + ++ + + + ++ +Y
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCR-MLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRG 607
CL +A L +EMP + + W +L G
Sbjct: 222 LCLKDARKLFDEMP-ERNLVTWNVMLNG 248
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/663 (27%), Positives = 322/663 (48%), Gaps = 90/663 (13%)
Query: 29 NSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNA------FSWNTLIEAHLHSGHRNES 82
+ ++ T L+ +Y+R D+A +LF +M ++++ ++ TL+ + +N +
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN-A 165
Query: 83 LRLFHAMPEKTHYSW-------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGY 135
+ HA K + N+L+ ++ + L LA LF+ +P K+ + +NT+I GY
Sbjct: 166 VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 136 SKRGHPRKALSLFKTMSL---DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE 192
K G +++ LF M P + +GVL V+G FAL G+Q+HA +
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQPSDFTF--SGVLKAVVG--LHDFAL--GQQLHALSVTT 279
Query: 193 GIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARR 252
G +R A V ++ DF Y+ ++ E R
Sbjct: 280 GF-------------------------SRDASVGNQILDF--------YSKHDRVLETRM 306
Query: 253 VFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLV 312
+FD + V +N +IS Y + +L F+ M+ G A +LS +L
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 313 VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITV 372
+++ +Q+H A + V ++L+D Y+K
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAK---------------------------- 398
Query: 373 YSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
C E+A+ IF ++ +T +SW +++ G + + +F +M +L+ D+ +F
Sbjct: 399 ---CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS-LVDFYCKCGFVEIGRKVFDGMI 491
A+V+ A AS + L LG+Q+ I G +++ S S LVD Y KCG ++ +VF+ M
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN 551
+ VSWN ++ +A NG G A+ F +M SG++P +++ VL+AC H G VE+G
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 552 LFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAH 611
F M Y I P+ +HY+CM+DL R G EA L++EMPF+ D MW SVL C H
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 612 GNRTIGKMAAEKIIQLDP-ENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
N+++ + AAEK+ ++ + AY+ +SN+ A + +WE V++ M ++ ++K+P S
Sbjct: 635 KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Query: 671 WAD 673
W +
Sbjct: 695 WVE 697
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/567 (24%), Positives = 236/567 (41%), Gaps = 67/567 (11%)
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
N ++E L G + + +++ MP K S N ++S K+GD+ A LFD+MP + +
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
W ++ Y++ H +A LF+ M D T+L C D N QVH
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSS-SCTLPDHVTFTTLLPGCNDAVPQNAVGQVH 170
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
A + G + + + L+K Y + LD A + + E D + + L++GY
Sbjct: 171 AFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK--- 227
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
+G E++ LF +MR+ G T + +L A
Sbjct: 228 ----------------------------DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
L L +Q+HA + G + D V + +LD YSK E F E+ D +
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
N +I+ YS + E ++ F M +
Sbjct: 320 NVVISSYSQADQYE-------------------------------ASLHFFREMQCMGFD 348
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
F FA+++S A+ S L++G Q+ +A+ + + SLVD Y KC E +
Sbjct: 349 RRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 487 FDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLV 546
F + + VSW ++ GY G L LF +MR S +R TF VL A +
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASL 468
Query: 547 EEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLR 606
G+ L + + N+ + S +VD+YA+ G + +A+ + EEMP +A W +++
Sbjct: 469 LLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALIS 526
Query: 607 GCIAHGNRTIGKMAAEKIIQ--LDPEN 631
+G+ A K+I+ L P++
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDS 553
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 194/445 (43%), Gaps = 61/445 (13%)
Query: 183 KQVHARVIVEGIELEFDKVLCSS--LVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSG 240
++V AR+I G FD C S +V+ + G + +A +V + + S + ++SG
Sbjct: 33 RRVDARIIKTG----FDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG 88
Query: 241 YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG--VSGDVS 298
+ G + AR +FD+ D+ V W ++ Y N EA LF++M R D
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 299 TVANILSAGCSLLVVE-LVKQMHAHACKIGVTHD--IVVASALLDAYSKSQGPHEACKFF 355
T +L GC+ V + V Q+HA A K+G + + V++ LL +Y + + AC F
Sbjct: 149 TFTTLL-PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAID 415
E+ D++ NT+IT G K+ +E+I
Sbjct: 208 EEIPEKDSVTFNTLIT-------------------------------GYEKDGLYTESIH 236
Query: 416 IFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYC 475
+F +M + F+F+ V+ A LG+Q+ ++T G D + ++DFY
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 476 KCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTA 535
K V R +FD M + D VS+N ++ Y+ +L FREM+C G F
Sbjct: 297 KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 536 VLSACDHTGLVEEGRNLF--------DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAID 587
+LS + ++ GR L D++ H N +VD+YA+ EA
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGN---------SLVDMYAKCEMFEEAEL 407
Query: 588 LIEEMPFQADANMWFSVLRGCIAHG 612
+ + +P Q W +++ G + G
Sbjct: 408 IFKSLP-QRTTVSWTALISGYVQKG 431
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 152/627 (24%), Positives = 237/627 (37%), Gaps = 163/627 (25%)
Query: 17 QLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
Q+H +K G N LT +N LL+ Y LD A LF+E+P+ ++ ++NTLI +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 76 SGHRNESLRLF----------------------------------HAMPEKTHYSW---- 97
G ES+ LF HA+ T +S
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 98 -NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
N ++ ++K + LFD MP + + +N +I YS+ +L F+ M
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVL--CSSLVKFYGKCG 214
+ + AT+L A+ +L G+Q+H + ++ D +L +SLV Y KC
Sbjct: 348 DRRNFP---FATMLSIAANLSSLQMGRQLHCQALLATA----DSILHVGNSLVDMYAKCE 400
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
+ A + + + S +AL+SGY G L
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKG----------------------------L 432
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVV 334
+G L LF +MR + D ST A +L A S + L KQ+HA + G ++
Sbjct: 433 HG---AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
S L+D Y+K CG I+DA +F+ M +
Sbjct: 490 GSGLVDMYAK-------------------------------CGSIKDAVQVFEEMPDRNA 518
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
+SWN+++ A N AI F +M L+ D S V++AC+
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS-------------- 564
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-----IKTDEVSWNTILMGYATNG 509
CGFVE G + F M I + + +L NG
Sbjct: 565 ---------------------HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSAC---DHTGLVEE-GRNLFDTMKHNYNINPE 565
+EA L EM P I +++VL+AC + L E LF K +
Sbjct: 604 RFAEAEKLMDEM---PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR-----D 655
Query: 566 IEHYSCMVDLYARAGCLGEAIDLIEEM 592
Y M ++YA AG + D+ + M
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAM 682
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 153/386 (39%), Gaps = 81/386 (20%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+QLH + TG + + N++L FYS+ + + LFDEMP+ + S+N +I ++
Sbjct: 269 GQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 75 HSGHRNESLRLFHAM----------PEKTHYSW--------------------------- 97
+ SL F M P T S
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 98 --NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
N LV +AK + A +F S+P + + W +I GY ++G L LF M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC-SSLVKFYGKCG 214
L D ATVL A A +L GKQ+HA +I G + V S LV Y KCG
Sbjct: 448 LR---ADQSTFATVLKASASFASLLLGKQLHAFIIRSG---NLENVFSGSGLVDMYAKCG 501
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
+ A +V F+ D+ AV WN++IS +
Sbjct: 502 SIKDAVQV-------------------------------FEEMPDRNAVSWNALISAHAD 530
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL--LVVELVKQMHAHACKIGVTHDI 332
NG+ A+ F +M G+ D ++ +L+A CS V + + A + G+T
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTA-CSHCGFVEQGTEYFQAMSPIYGITPKK 589
Query: 333 VVASALLDAYSKSQGPHEACKFFGEL 358
+ +LD ++ EA K E+
Sbjct: 590 KHYACMLDLLGRNGRFAEAEKLMDEM 615
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 118/229 (51%), Gaps = 6/229 (2%)
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
+++ A K G D ++ +++ + A K + E+ +T+ NTMI+ +
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIF---CRMNMLDLKMDKFSF 432
G + A+ +FD M +T+++W ++ A+N+ EA +F CR + L D +F
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP-DHVTF 150
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS--LVDFYCKCGFVEIGRKVFDGM 490
+++ C QV A+ +G + + ++ S L+ YC+ +++ +F+ +
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+ D V++NT++ GY +G +E++ LF +MR SG +PS TF+ VL A
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 51/328 (15%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
+L+ GRQLH L +S L N L+ Y++ ++A +F +PQ SW LI
Sbjct: 366 SLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 71 EAHLHSGHRNESLRLFHAMP---------------------------EKTH--------- 94
++ G L+LF M ++ H
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 95 ---YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
+S + LV +AK G ++ A +F+ MP +N + WN +I ++ G A+ F M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQ-VHARVIVEGIELEFDKVLCSSLVKFY 210
L+ D+ + VL AC+ C + G + A + GI + C ++
Sbjct: 545 IESGLQ---PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC--MLDLL 599
Query: 211 GKCGDLDSAARVAGVVK-EVDDFSLSALVSG---YANAG-KMREARRVFDSRVDQCAVLW 265
G+ G A ++ + E D+ S++++ + N R A ++F + A +
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGV 293
S+ + Y GE + + K MR G+
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGI 687
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 202/747 (27%), Positives = 344/747 (46%), Gaps = 96/747 (12%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQ----LFDEMPQTNAFSWNTL 69
+ R+ ++SF K N + + R G L +A + LF + + ++ L
Sbjct: 31 KSRKKNLSFTKKKEPN---IIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKL 87
Query: 70 IEAHLHSGHRNESLRLFHA----MPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
+E+ + SG + R+ HA E + L+S +AK G + A +FDSM +N
Sbjct: 88 LESCIDSGSIHLG-RILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 126 LVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQV 185
W+ +I YS+ R+ LF+ M D V D + +L CA+C + GK +
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDG---VLPDDFLFPKILQGCANCGDVEAGKVI 203
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAG 245
H+ VI G+ + +S++ Y KCG+LD A + ++E D + ++++ Y G
Sbjct: 204 HSVVIKLGMSSCLR--VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNG 261
Query: 246 KMREARRVFD---------------------SRVDQC------------------AVLWN 266
K EA + +++ +C W
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 267 SIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
++ISG + NG +AL +F++M GV + T+ + +SA L V+ ++H+ A K+
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
G D++V ++L+D YSK +A K F +K D N+MIT Y G A +F
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 387 DTMSSKTL----ISWNSILVGLAKNACPSEAIDIFCRM-------------NML------ 423
M L I+WN+++ G KN EA+D+F RM N++
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 424 ------------DLKMDKF-----SFASVISACASKSCLELGEQVFGKAITVGLEFDHII 466
++ +F + S++ ACA+ ++ ++ G + L+ H +
Sbjct: 502 NGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAV 561
Query: 467 STSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGV 526
+L D Y K G +E R +F GM D ++WN+++ GY +G AL LF +M+ G+
Sbjct: 562 KNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
P+ T ++++ A G V+EG+ +F ++ ++Y+I P +EH S MV LY RA L EA+
Sbjct: 622 TPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEAL 681
Query: 587 DLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE 646
I+EM Q++ +W S L GC HG+ + AAE + L+PEN +S + A
Sbjct: 682 QFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGA 741
Query: 647 DWEGSAQVRELMIDKNVQKIPGCSWAD 673
S + + D ++K G SW +
Sbjct: 742 KLGRSLEGNKPRRDNLLKKPLGQSWIE 768
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 245/451 (54%), Gaps = 4/451 (0%)
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
A++ + D F + L+ + + A VF + L+ ++I G+V +G
Sbjct: 50 AKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSA 109
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+ ++L+ RM + V D + ++L A C L ++ +++HA K+G V ++
Sbjct: 110 DGVSLYHRMIHNSVLPDNYVITSVLKA-CDL---KVCREIHAQVLKLGFGSSRSVGLKMM 165
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
+ Y KS A K F E+ D + MI YS CG I++A +F + K + W +
Sbjct: 166 EIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTA 225
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
++ GL +N ++A+++F M M ++ ++F+ V+SAC+ LELG V
Sbjct: 226 MIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQR 285
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
+E + + +L++ Y +CG + R+VF M D +S+NT++ G A +G EA+ FR
Sbjct: 286 MELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFR 345
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
+M G RP+ +T A+L+AC H GL++ G +F++MK +N+ P+IEHY C+VDL R
Sbjct: 346 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRV 405
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G L EA IE +P + D M ++L C HGN +G+ A+++ + + + G Y+ LS
Sbjct: 406 GRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLS 465
Query: 640 NVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
N+ A+S W+ S ++RE M D ++K PGCS
Sbjct: 466 NLYASSGKWKESTEIRESMRDSGIEKEPGCS 496
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 224/528 (42%), Gaps = 93/528 (17%)
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
AH+ S H + +R FH ++ + L+ + + A+ +F + N ++ +
Sbjct: 43 AHVPSIHA-KIIRTFH---DQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAM 98
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIV 191
I G+ G +SL+ M + V D V+ +VL AC L +++HA+V+
Sbjct: 99 IDGFVSSGRSADGVSLYHRMIHNS---VLPDNYVITSVLKACD----LKVCREIHAQVLK 151
Query: 192 EGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREAR 251
G + + +++ YGK G+L +A ++ + + D + + +++ Y+ G ++EA
Sbjct: 152 LG--FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEAL 209
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
+F + V W ++I G V N E +AL LF+ M+ VS + T +LSA L
Sbjct: 210 ELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMIT 371
+EL + +H+ + V +AL++ YS+ +EA + F ++ D I NTMI+
Sbjct: 270 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 329
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
GLA + EAI+ F M + ++ +
Sbjct: 330 -------------------------------GLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 432 FASVISACASKSCLELGEQVFG---KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFD 488
++++AC+ L++G +VF + V + +H +VD + G +E
Sbjct: 359 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY--GCIVDLLGRVGRLE------- 409
Query: 489 GMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEE 548
EA +R + + P I +LSAC G +E
Sbjct: 410 ------------------------EA---YRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 549 G----RNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
G + LF++ NP+ Y + +LYA +G E+ ++ E M
Sbjct: 443 GEKIAKRLFESE------NPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 37/249 (14%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L+ R++H LK G SS + ++++ Y + G L +A ++FDEM
Sbjct: 139 LKVCREIHAQVLKLG-FGSSRSVGLKMMEIYGKSGELVNAKKMFDEM------------- 184
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
P++ H + ++++ +++ G ++ A LF + K+ + W +
Sbjct: 185 ------------------PDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAM 226
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIV 191
I G + KAL LF+ M +E V + VL AC+D AL G+ VH+ V
Sbjct: 227 IDGLVRNKEMNKALELFREMQ---MENVSANEFTAVCVLSACSDLGALELGRWVHS--FV 281
Query: 192 EGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREAR 251
E +E + ++L+ Y +CGD++ A RV V+++ D S + ++SG A G EA
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAI 341
Query: 252 RVFDSRVDQ 260
F V++
Sbjct: 342 NEFRDMVNR 350
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 188/668 (28%), Positives = 302/668 (45%), Gaps = 114/668 (17%)
Query: 51 ATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPE------KTHYS-------- 96
A QLFD MP+ N S+N+LI + G +++ LF E K Y+
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 97 -------------------------WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
N+L+ ++K G L A SLFD ++ + WN++
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCG---KQVHAR 188
I GY + G + L+L M D L + L +VL AC C LN G K +
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRDGLNLT---TYALGSVLKAC--CINLNEGFIEKGMAIH 275
Query: 189 VIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMR 248
+ +EFD V+ ++L+ Y K G L +
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSL-------------------------------K 304
Query: 249 EARRVFDSRVDQCAVLWNSIISGYVLNGE-----EMEALALFKRMRRHGVSGDVSTVANI 303
EA ++F + V +N++ISG++ E EA LF M+R G+ ST + +
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVV 364
Query: 304 LSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT 363
L A + +E +Q+HA CK D + SAL
Sbjct: 365 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL------------------------- 399
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
I +Y+ G ED F + S + + SW S++ +N A D+F ++
Sbjct: 400 ------IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
++ ++++ + ++SACA + L GEQ+ G AI G++ + TS + Y K G + +
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
+VF + D +++ ++ A +G +EAL +F M+ G++P+ F VL AC H
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFS 603
GLV +G F MK++Y INP +H++C+VDL R G L +A +LI FQ W +
Sbjct: 574 GLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 604 VLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNV 663
+L C + + IGK AE++++L+PE G+Y+ L N+ S + +VRELM D+ V
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGV 693
Query: 664 QKIPGCSW 671
+K P SW
Sbjct: 694 KKEPALSW 701
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 9/231 (3%)
Query: 382 AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACAS 441
AK F+ ++ +L++ + VGL S C+ + +D + + A
Sbjct: 7 AKTFFNNIAQDSLVTLITKRVGLGYRFLSS-----LCQPK--NTALDSEGYKILFQTAAK 59
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTI 501
+ LG+ G I L + +L++ YCKC + R++FD M + + +S+N++
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
+ GY G+ +A+ LF E R + ++ T+ L C ++ G L + N
Sbjct: 120 ISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN-G 178
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
++ ++ + ++D+Y++ G L +A+ L + + D W S++ G + G
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISGYVRVG 228
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 185/640 (28%), Positives = 300/640 (46%), Gaps = 87/640 (13%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
+R G QLH LK G+ + LL Y R L+ A Q+F++MP + +WN ++
Sbjct: 129 VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS 188
Query: 72 AHLHSGHRNESLRLFHAM---------------------------PEKTHYSW------- 97
H G E + F + ++ H S
Sbjct: 189 LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDC 248
Query: 98 -----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
N L+SA+ K G+ +A +F + + WN II +K +P KAL LF +M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM- 307
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
P + G +VLG + L+CG+Q+H +I G E VL ++L+ FY K
Sbjct: 308 --PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGI--VLGNALIDFYAK 363
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
C G + ++R FD D+ V WN+++SGY
Sbjct: 364 C-------------------------------GNLEDSRLCFDYIRDKNIVCWNALLSGY 392
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
N + L+LF +M + G T + L + C V EL +Q+H+ ++G +
Sbjct: 393 A-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC---VTEL-QQLHSVIVRMGYEDND 447
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTIL-LNTMITVYSNCGRIEDAKWIFDTMSS 391
V S+L+ +Y+K+Q ++A +++ LN + +YS G+ ++ + T+
Sbjct: 448 YVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ 507
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
+SWN + +++ E I++F M +++ DK++F S++S C+ L LG +
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 452 FGKAITVGLEF---DHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
G + +F D + L+D Y KCG + KVF+ + + ++W ++ +
Sbjct: 568 HG--LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
GYG EAL F+E G +P ++F ++L+AC H G+V+EG LF MK +Y + PE++H
Sbjct: 626 GYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDH 684
Query: 569 YSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGC 608
Y C VDL AR G L EA LI EMPF ADA +W + L GC
Sbjct: 685 YRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/542 (25%), Positives = 224/542 (41%), Gaps = 99/542 (18%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS-L 153
Y N ++S + K G++ LA +FD MP +N + +NTII GYSK G KA +F M
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
L +G+L +CA + G Q+H G+ L++ + + F G C
Sbjct: 110 GYLPNQSTVSGLL-----SCAS-LDVRAGTQLH------GLSLKYGLFMADA---FVGTC 154
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
L+ Y + A +VF+ + WN ++S
Sbjct: 155 -----------------------LLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
G E + F+ + R G S S+ +L + +++ KQ+H A K G+ +I
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
V ++L+ AY K H A + F + ++D
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWD------------------------------- 280
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
++SWN+I+ AK+ P +A+ +F M ++ ++ SV+ + L G Q+ G
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
I G E ++ +L+DFY KCG +E R FD + + V WN +L GYA N G
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPI 399
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGL-----------VEEGRNLFDTMKHNYNI 562
L+LF +M G RP+ TF+ L +C T L E+ + ++ +Y
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 563 NPEIEHYSCMVD----------------LYARAGCLGEAIDLIEEMPFQADANMWFSVLR 606
N + ++D +Y+R G E++ LI + Q D W +
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIA 518
Query: 607 GC 608
C
Sbjct: 519 AC 520
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/632 (20%), Positives = 249/632 (39%), Gaps = 123/632 (19%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL-------HSGHRNESLRLFHA 88
N +++ YS+ G +D A +F EM + + L +G + L L +
Sbjct: 84 NTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYG 143
Query: 89 MPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
+ + L+ + + L++A +F+ MP K+ WN ++ RG ++ + F
Sbjct: 144 LFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFF 203
Query: 149 KTMSLDPLEMVHCDAGVLAT----VLGACADCFALNCGKQVHARVIVEGIELEFDKVLCS 204
+ E+V A + + VL + L+ KQ+H +G++ E V +
Sbjct: 204 R-------ELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV--N 254
Query: 205 SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL 264
SL+ YGKCG+ A R+ + +AG V
Sbjct: 255 SLISAYGKCGNTHMAERM------------------FQDAGSWD-------------IVS 283
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHAC 324
WN+II + ++AL LF M HG S + T ++L + ++ +Q+H
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKW 384
K G IV+ +AL+D Y+K CG +ED++
Sbjct: 344 KNGCETGIVLGNALIDFYAK-------------------------------CGNLEDSRL 372
Query: 385 IFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
FD + K ++ WN++L G A P + +F +M + + +++F++ + +C C
Sbjct: 373 CFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSC----C 427
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKC--------------------------- 477
+ +Q+ + +G E + + +SL+ Y K
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 478 -----GFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
G K+ + + D VSWN + + + Y E + LF+ M S +RP T
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
F ++LS C + G ++ + + + ++D+Y + G + + + EE
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 593 PFQADANMWFSVLRGCIAHGNRTIGKMAAEKI 624
+ + W +++ HG G+ A EK
Sbjct: 608 R-EKNLITWTALISCLGIHG---YGQEALEKF 635
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 16/300 (5%)
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
N +I++Y G + A +FD M + +S+N+I+ G +K +A +F M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEF-DHIISTSLVDFYCKCGFVEIGRK 485
++ + + ++S CAS + G Q+ G ++ GL D + T L+ Y + +E+ +
Sbjct: 113 PNQSTVSGLLS-CASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 486 VFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
VF+ M +WN ++ G+ E + FRE+ G + +F VL
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD 230
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSV- 604
++ + L + ++ EI + ++ Y + G + E M FQ DA W V
Sbjct: 231 LDISKQLHCSATKK-GLDCEISVVNSLISAYGKCG----NTHMAERM-FQ-DAGSWDIVS 283
Query: 605 LRGCIAHGNRTIGKMAAEKIIQLDPE-----NPGAYIQLSNVLATSEDWEGSAQVRELMI 659
I ++ + A K+ PE N G Y+ + V + + Q+ ++I
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 236/448 (52%), Gaps = 33/448 (7%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFD--SRVDQCAVLWNSIISGYVLNGEEMEALALF 285
E + F L+AL+S Y G + +AR+VF+ + Q +V +N++ISGY N + +A +F
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
+RM+ GVS D T+ ++ + L + +H K G+ ++ V
Sbjct: 145 RRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAV----------- 193
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
LN+ IT+Y CG +E + +FD M K LI+WN+++ G +
Sbjct: 194 --------------------LNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS 233
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
+N + ++++ +M + D F+ SV+S+CA ++G +V + G +
Sbjct: 234 QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF 293
Query: 466 ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
+S + + Y +CG + R VFD M VSW ++ Y +G G L LF +M G
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Query: 526 VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
+RP F VLSAC H+GL ++G LF MK Y + P EHYSC+VDL RAG L EA
Sbjct: 354 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 413
Query: 586 IDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATS 645
++ IE MP + D +W ++L C H N + ++A K+I+ +P N G Y+ +SN+ + S
Sbjct: 414 MEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDS 473
Query: 646 EDWEGSAQVRELMIDKNVQKIPGCSWAD 673
++ EG ++R +M ++ +K PG S+ +
Sbjct: 474 KNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 173/373 (46%), Gaps = 37/373 (9%)
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHAC 324
WN + E+++L++ M R G S D + IL + SL + +Q+H H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKW 384
K G + V +AL I++Y CG + DA+
Sbjct: 81 KGGCETEPFVLTAL-------------------------------ISMYCKCGLVADARK 109
Query: 385 IFD--TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
+F+ SS+ + +N+++ G N+ ++A +F RM + +D + ++ C
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVP 169
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL 502
L LG + G+ + GL+ + + S + Y KCG VE GR++FD M ++WN ++
Sbjct: 170 EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
GY+ NG + L L+ +M+ SGV P T +VLS+C H G + G + ++ N
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GF 288
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIA-HGNRTIGKMAA 621
P + + + +YAR G L +A + + MP ++ + W +++ GC HG IG M
Sbjct: 289 VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS-WTAMI-GCYGMHGMGEIGLMLF 346
Query: 622 EKIIQLDPENPGA 634
+ +I+ GA
Sbjct: 347 DDMIKRGIRPDGA 359
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 170/418 (40%), Gaps = 75/418 (17%)
Query: 91 EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL--VWNTIIHGYSKRGHPRKALSLF 148
E + L+S + K G + A +F+ P + L +N +I GY+ A +F
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+ M V D+ + ++ C L G+ +H + + G++ E + +S +
Sbjct: 145 RRMKETG---VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV--AVLNSFIT 199
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
Y KCG +++ RR+FD + + WN++
Sbjct: 200 MYMKCGSVEAG-------------------------------RRLFDEMPVKGLITWNAV 228
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
ISGY NG + L L+++M+ GV D T+ ++LS+ C+ H A KIG
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS-CA----------HLGAKKIG- 276
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL-NTMITVYSNCGRIEDAKWIFD 387
HE K + + N I++Y+ CG + A+ +FD
Sbjct: 277 --------------------HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
M K+L+SW +++ + + +F M ++ D F V+SAC+ +
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 448 GEQVFGKAIT--VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
G ++F +A+ LE + LVD + G ++ + + M ++ D W +L
Sbjct: 377 GLELF-RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 128/336 (38%), Gaps = 79/336 (23%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFS--WNTLIEA 72
G+QLH K G L+ Y + G + DA ++F+E PQ++ S +N LI
Sbjct: 72 GQQLHCHVTKGGCETEPFVL-TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISG 130
Query: 73 HLHSGHRNESLRLFHAMPEK------------------THYSW----------------- 97
+ + ++ +F M E Y W
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 98 ----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
N ++ + K G ++ LFD MP K + WN +I GYS+ G L L++ M
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
V D L +VL +CA A G +V GK
Sbjct: 251 SG---VCPDPFTLVSVLSSCAHLGAKKIGHEV-------------------------GKL 282
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
+ + G V V F +A +S YA G + +AR VFD + V W ++I Y
Sbjct: 283 VESN------GFVPNV--FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
++G L LF M + G+ D + +LSA CS
Sbjct: 335 MHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA-CS 369
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 95/244 (38%), Gaps = 44/244 (18%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GR LH +K G L+S + N + Y + G ++ +LFDEMP +WN +I +
Sbjct: 175 GRSLHGQCVKGG-LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS 233
Query: 75 HSGHRNESLRLFHAMP----------------------------------EKTHYSWNML 100
+G + L L+ M E + N+
Sbjct: 234 QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF 293
Query: 101 V-----SAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
V S +A+ G+L A ++FD MP K+ + W +I Y G L LF M
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI--- 350
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
+ D V VL AC+ + G ++ R + +LE S LV G+ G
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 216 LDSA 219
LD A
Sbjct: 410 LDEA 413
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/567 (28%), Positives = 284/567 (50%), Gaps = 75/567 (13%)
Query: 111 QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
+ ++ LF N ++N++I+G+ + L LF ++ L + VL
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGL---YLHGFTFPLVL 118
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG-DLDSAARVAGVVKEV 229
AC + G +H+ V+ KCG + D AA
Sbjct: 119 KACTRASSRKLGIDLHSLVV---------------------KCGFNHDVAA--------- 148
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
+++L+S Y+ +G++ +A ++FD D+ V W ++ SGY +G EA+ LFK+M
Sbjct: 149 ----MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
GV D + +LSA C H + IV
Sbjct: 205 EMGVKPDSYFIVQVLSA-C------------VHVGDLDSGEWIV---------------- 235
Query: 350 EACKFFGELKAY-DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
K+ E++ ++ + T++ +Y+ CG++E A+ +FD+M K +++W++++ G A N+
Sbjct: 236 ---KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEF--DHII 466
P E I++F +M +LK D+FS +S+CAS L+LGE +G ++ EF + +
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE--WGISLIDRHEFLTNLFM 350
Query: 467 STSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGV 526
+ +L+D Y KCG + G +VF M + D V N + G A NG+ + +F + G+
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
P TF +L C H GL+++G F+ + Y + +EHY CMVDL+ RAG L +A
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 587 DLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE 646
LI +MP + +A +W ++L GC + + + +++I L+P N G Y+QLSN+ +
Sbjct: 471 RLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGG 530
Query: 647 DWEGSAQVRELMIDKNVQKIPGCSWAD 673
W+ +A+VR++M K ++KIPG SW +
Sbjct: 531 RWDEAAEVRDMMNKKGMKKIPGYSWIE 557
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 7/272 (2%)
Query: 361 YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
+DT L+N ++ + + + +F + +NS++ G N E +D+F +
Sbjct: 43 HDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSI 102
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
L + F+F V+ AC S +LG + + G D TSL+ Y G +
Sbjct: 103 RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL 162
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
K+FD + V+W + GY T+G EA+ LF++M GV+P + VLSAC
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 541 DHTGLVEEGRNLFDTMKH-NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
H G ++ G + M+ N + + +V+LYA+ G + +A + + M + D
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVR--TTLVNLYAKCGKMEKARSVFDSM-VEKDIV 279
Query: 600 MWFSVLRGCIAHGNRTIGKMAAEKIIQLDPEN 631
W ++++G + + + K E +Q+ EN
Sbjct: 280 TWSTMIQG---YASNSFPKEGIELFLQMLQEN 308
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 45/279 (16%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G LH +K G N + LL YS G L+DA +LFDE+P + +W L +
Sbjct: 130 GIDLHSLVVKCG-FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 75 HSGHRNESLRLFHAMPE---------------------------------------KTHY 95
SG E++ LF M E K +
Sbjct: 189 TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF 248
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
LV+ +AK G ++ A S+FDSM K+ + W+T+I GY+ P++ + LF M +
Sbjct: 249 VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
L+ D + L +CA AL+ G+ +++ E + + ++L+ Y KCG
Sbjct: 309 LK---PDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
+ V +KE D ++A +SG A G ++ + VF
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 239/472 (50%), Gaps = 39/472 (8%)
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD 296
L+ YA+ + AR+VFD ++ ++ N +I YV NG E + +F M V D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 297 VSTVANILSA-GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFF 355
T +L A CS +V + +++H A K+G++ + V + L+ Y K EA
Sbjct: 140 HYTFPCVLKACSCSGTIV-IGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDA--------------------------------- 382
E+ D + N+++ Y+ R +DA
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 383 ----KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISA 438
K +F M K+L+SWN ++ KNA P EA++++ RM + D S SV+ A
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 439 CASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSW 498
C S L LG+++ G L + ++ +L+D Y KCG +E R VF+ M D VSW
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 499 NTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
++ Y +G G +A+ LF +++ SG+ P +I F L+AC H GL+EEGR+ F M
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Query: 559 NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGK 618
+Y I P +EH +CMVDL RAG + EA I++M + + +W ++L C H + IG
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
Query: 619 MAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+AA+K+ QL PE G Y+ LSN+ A + WE +R +M K ++K PG S
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 138/264 (52%), Gaps = 13/264 (4%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
T+ GR++H S K G L+S+L N L+ Y + G L +A + DEM + + SWN+L+
Sbjct: 155 TIVIGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLV 213
Query: 71 EAHLHSGHRNESLRLFHAMP--EKTHYSWNM--LVSAFAKSG--DLQLAHSLFDSMPCKN 124
+ + +++L + M + +H + M L+ A + + ++ +F M K+
Sbjct: 214 VGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKS 273
Query: 125 GLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
+ WN +I Y K P +A+ L+ M D E DA + +VL AC D AL+ GK+
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP---DAVSITSVLPACGDTSALSLGKK 330
Query: 185 VHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANA 244
+H +E +L + +L ++L+ Y KCG L+ A V +K D S +A++S Y +
Sbjct: 331 IHG--YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 245 GKMREARRVFDSRVDQCAVLWNSI 268
G+ +A +F S++ ++ +SI
Sbjct: 389 GRGCDAVALF-SKLQDSGLVPDSI 411
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 176/448 (39%), Gaps = 87/448 (19%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPL 156
L+ A+A D+ A +FD +P +N ++ N +I Y G + + +F TM ++ P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP- 138
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
D VL AC+ + G+++H G+ + + LV YGKCG L
Sbjct: 139 -----DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL--FVGNGLVSMYGKCGFL 191
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRV----------------------- 253
A V + D S ++LV GYA + +A V
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 254 --------------FDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVST 299
F + V WN +I Y+ N +EA+ L+ RM G D +
Sbjct: 252 SNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVS 311
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
+ ++L A + L K++H + + + ++++ +AL+D Y+K +A F +K
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
+ D + MI+ Y GR DA +F + L+
Sbjct: 372 SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP----------------------- 408
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT----VGLEFDHIISTSLVDFYC 475
D +F + ++AC+ LE G F K +T + +H+ +VD
Sbjct: 409 --------DSIAFVTTLAACSHAGLLEEGRSCF-KLMTDHYKITPRLEHL--ACMVDLLG 457
Query: 476 KCGFV-EIGRKVFDGMIKTDEVSWNTIL 502
+ G V E R + D ++ +E W +L
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALL 485
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 451 VFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGY 510
V + I L + + L+ Y V RKVFD + + + + N ++ Y NG+
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 511 GSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYS 570
E + +F M VRP TF VL AC +G + GR + + ++ + +
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT-KVGLSSTLFVGN 179
Query: 571 CMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
+V +Y + G L EA +++EM + D W S++ G
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVG 215
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 192/740 (25%), Positives = 337/740 (45%), Gaps = 90/740 (12%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
E + H + + TG L+ ++ A++L+ Y+ G + ++++F + + + F WN++I+AH
Sbjct: 41 ESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH 100
Query: 74 LHSGHRNESLRLFHAM----PEKTHYSWNMLVSA-------------------------- 103
+G SL F +M H++ M+VSA
Sbjct: 101 FSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRN 160
Query: 104 ----------FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
++K G LQ A +FD MP ++ + W II G+ + G L M
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHS 220
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
++ + L AC++ AL G+ +H + G L K + SS+ FY K
Sbjct: 221 AGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNG--LASSKFVQSSMFSFYSKS 278
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
G+ A + + D FS +++++ A +G M E+ +F ++ +IS +
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 274 LNGEEM----EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
+M + A + RH S D + ++LS C ++ + +++ C+I
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF---CRISEE 395
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELK----------AYDTI--------------- 364
+ + +L Y K + + + F +++ A I
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 365 --------------LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
++N++I +Y G + A W + +I+WN+++
Sbjct: 456 HCYVVKTSLDLTISVVNSLIDLYGKMGDLTVA-WRMFCEADTNVITWNAMIASYVHCEQS 514
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
+AI +F RM + K + +++ AC + LE G+ + E + +S +L
Sbjct: 515 EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAAL 574
Query: 471 VDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSA 530
+D Y KCG +E R++FD + D V WN ++ GY +G A+ LF +M S V+P+
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 531 ITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIE 590
TF A+LSAC H GLVE+G+ LF M H Y++ P ++HYSC+VDL +R+G L EA +
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVM 693
Query: 591 EMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEG 650
MPF D +W ++L C+ HG +G AE+ + DP+N G YI L+N+ + + WE
Sbjct: 694 SMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEE 753
Query: 651 SAQVRELMIDKNVQKIPGCS 670
+ + RE+M + V K G S
Sbjct: 754 AERAREMMRESGVGKRAGHS 773
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 216/540 (40%), Gaps = 112/540 (20%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L+EGR LH +K G+ +S ++ + FYS+ G +A F E+ + FSW ++I
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSS-MFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAK-----------------------SG 108
+ SG ES +F M K + +++S S
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL 364
Query: 109 DLQLAHSLFDSMPCK------------------NGLVWNTIIHGYSKRGHPRKALSLFKT 150
D + +SL SM CK N WNT++ GY K K + LF+
Sbjct: 365 DSTVCNSLL-SMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK 423
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
+ +E+ D+ +V+ +C+ A+ GK +H V+ ++L V +SL+ Y
Sbjct: 424 IQNLGIEI---DSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVV--NSLIDLY 478
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
GK GDL A R+ D + WN++I+
Sbjct: 479 GKMGDLTVAWRMF--------------------------------CEADTNVITWNAMIA 506
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
YV + +A+ALF RM T+ +L A + +E + +H + +
Sbjct: 507 SYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM 566
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
++ +++AL+D Y+K CG +E ++ +FD +
Sbjct: 567 NLSLSAALIDMYAK-------------------------------CGHLEKSRELFDAGN 595
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
K + WN ++ G + AI +F +M D+K +F +++SAC +E G++
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKK 655
Query: 451 VFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNG 509
+F K ++ + + LVD + G +E M D V W T+L T+G
Sbjct: 656 LFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHG 715
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 275/573 (47%), Gaps = 75/573 (13%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
L+SA + LA +F+ + N + N++I +++ P +A +F M L
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGL--- 113
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D +L AC+ L K +H + E + L D + ++L+ Y +CG L
Sbjct: 114 FADNFTYPFLLKACSGQSWLPVVKMMHNHI--EKLGLSSDIYVPNALIDCYSRCGGL--- 168
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
GV R+A ++F+ ++ V WNS++ G V GE
Sbjct: 169 ----GV----------------------RDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+A LF M + D++ + +L
Sbjct: 203 DARRLFDEMPQR---------------------------------------DLISWNTML 223
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS--SKTLISW 397
D Y++ + +A + F ++ +T+ +TM+ YS G +E A+ +FD M +K +++W
Sbjct: 224 DGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
I+ G A+ EA + +M LK D + S+++AC L LG ++
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKR 343
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
L + + +L+D Y KCG ++ VF+ + K D VSWNT+L G +G+G EA+ L
Sbjct: 344 SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYA 577
F MR G+RP +TF AVL +C+H GL++EG + F +M+ Y++ P++EHY C+VDL
Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLG 463
Query: 578 RAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQ 637
R G L EAI +++ MP + + +W ++L C H I K + +++LDP +PG Y
Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSL 523
Query: 638 LSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
LSN+ A +EDWEG A +R M V+K G S
Sbjct: 524 LSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 150/295 (50%), Gaps = 14/295 (4%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCL--DDATQLFDEMPQTNAFSWNTLIEAH 73
+ +H K G L+S + N L+ YSR G L DA +LF++M + + SWN+++
Sbjct: 137 KMMHNHIEKLG-LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 74 LHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIH 133
+ +G ++ RLF MP++ SWN ++ +A+ ++ A LF+ MP +N + W+T++
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVM 255
Query: 134 GYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEG 193
GYSK G A +F M L +V ++ A+ L ++ +++ G
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKNVV-----TWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 194 IELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE----VDDFSLSALVSGYANAGKMRE 249
L+FD S++ + G L R+ ++K + + L+AL+ YA G +++
Sbjct: 311 --LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANIL 304
A VF+ + V WN+++ G ++G EA+ LF RMRR G+ D T +L
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 131/582 (22%), Positives = 252/582 (43%), Gaps = 94/582 (16%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
L + +QLH ++ L+ L A +L+ S + A ++F+++ + N N+LI
Sbjct: 31 NLNQVKQLHAQIIRRN-LHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 71 EAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDL---QLAHSLFDSMPCK 123
AH + ++ +F M ++++ L+ A + L ++ H+ + +
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 124 NGL-VWNTIIHGYSKRG--HPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
+ + V N +I YS+ G R A+ LF+ MS D ++LG +
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-------ERDTVSWNSMLGGL-----VK 197
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSG 240
G+ AR + + + + D + ++++ Y +C ++ A + + E + S S +V G
Sbjct: 198 AGELRDARRLFDEMP-QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMG 256
Query: 241 YANAGKMREARRVFDSR--VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVS 298
Y+ AG M AR +FD + V W II+GY G EA L +M G+ D +
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 299 TVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL 358
V +IL+A ++ L ++H+ + + + V +ALLD Y+K
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK-------------- 362
Query: 359 KAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFC 418
CG ++ A +F+ + K L+SWN++L GL + EAI++F
Sbjct: 363 -----------------CGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 419 RMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG 478
RM ++ DK +F +V+ +C ++ G +D++
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEG----------------------IDYFYSM- 442
Query: 479 FVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLS 538
KV+D + + + L+G G EA+ + + M + P+ + + A+L
Sbjct: 443 -----EKVYDLVPQVEHYGCLVDLLGRV--GRLKEAIKVVQTM---PMEPNVVIWGALLG 492
Query: 539 ACDHTGLVEEGRNLFDTMKHNYNINP-EIEHYSCMVDLYARA 579
AC V+ + + D + ++P + +YS + ++YA A
Sbjct: 493 ACRMHNEVDIAKEVLDNL---VKLDPCDPGNYSLLSNIYAAA 531
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 139/314 (44%), Gaps = 48/314 (15%)
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
VKQ+HA + + D+ +A L+ A S + + A + F +++ + L N++I +
Sbjct: 35 VKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH-- 92
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
A+N+ P +A +F M L D F++ +
Sbjct: 93 -----------------------------AQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEI--GRKVFDGMIKT 493
+ AC+ +S L + + + +GL D + +L+D Y +CG + + K+F+ M +
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 494 DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF 553
D VSWN++L G G +A LF EM + I++ +L + + LF
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELF 239
Query: 554 DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVL------RG 607
+ M ++ +S MV Y++AG + A + ++MP A + ++++ +G
Sbjct: 240 EKMPERNTVS-----WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKG 294
Query: 608 CIAHGNRTIGKMAA 621
+ +R + +M A
Sbjct: 295 LLKEADRLVDQMVA 308
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 241/425 (56%), Gaps = 4/425 (0%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
AR++FD + C L+N +I Y ++ + E++ L+ + G+ T I +A S
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
++ +H+ + G D + L+ AY+K A + F E+ D + N M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIF-CRMNMLDLKMD 428
IT Y G ++ A +FD+M K + SW +++ G ++N SEA+ +F C +K +
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 429 KFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI-ISTSLVDFYCKCGFVEIGRKVF 487
+ SV+ ACA+ LE+G ++ G A G FD+I + + ++ Y KCG +++ +++F
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLF 273
Query: 488 DGMIKTDEV-SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLV 546
+ + + SWN+++ AT+G EALTLF +M G +P A+TF +L AC H G+V
Sbjct: 274 EELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMV 333
Query: 547 EEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLR 606
+G+ LF +M+ + I+P++EHY CM+DL R G L EA DLI+ MP + DA +W ++L
Sbjct: 334 VKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLG 393
Query: 607 GCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKI 666
C HGN I ++A+E + +L+P NPG + +SN+ A +E W+G ++R+LM + + K
Sbjct: 394 ACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKA 453
Query: 667 PGCSW 671
G S+
Sbjct: 454 AGYSY 458
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 52 TQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQ 111
+Q F ++++F TLI A+ G + R+F M ++ WN +++ + + GD++
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMK 165
Query: 112 LAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLG 171
A LFDSMP KN W T+I G+S+ G+ +AL +F M D + V + + +VL
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD--KSVKPNHITVVSVLP 223
Query: 172 ACADCFALNCGKQVHARVIVEGIELEFDKV-LCSSLVKFYGKCGDLDSAARVAGVVKEVD 230
ACA+ L G+++ G FD + +C++ ++ Y KCG +D A R+
Sbjct: 224 ACANLGELEIGRRLEGYARENGF---FDNIYVCNATIEMYSKCGMIDVAKRL-------- 272
Query: 231 DFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR 290
+ G R + C+ WNS+I +G+ EAL LF +M R
Sbjct: 273 ----------FEELGNQR----------NLCS--WNSMIGSLATHGKHDEALTLFAQMLR 310
Query: 291 HGVSGDVSTVANILSA 306
G D T +L A
Sbjct: 311 EGEKPDAVTFVGLLLA 326
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 164/416 (39%), Gaps = 76/416 (18%)
Query: 109 DLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLAT 168
+L A LFD ++N +I Y P +++ L+ +S D L H +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 169 VLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
+ + L + +H++ G E
Sbjct: 91 ASASFSSARPL---RLLHSQFFRSGFE--------------------------------- 114
Query: 229 VDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
D F + L++ YA G + ARRVFD + +WN++I+GY G+ A+ LF M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 289 RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
R V+ + ++ G +++ M K + I V S L
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD--KSVKPNHITVVSVL---------- 222
Query: 349 HEACKFFGELKA-------------YDTILL-NTMITVYSNCGRIEDAKWIFDTM-SSKT 393
AC GEL+ +D I + N I +YS CG I+ AK +F+ + + +
Sbjct: 223 -PACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
L SWNS++ LA + EA+ +F +M K D +F ++ AC + G+++F
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 454 KAITVGLEFDHIISTSL------VDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+E H IS L +D + G ++ + M +K D V W T+L
Sbjct: 342 -----SMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 123/317 (38%), Gaps = 83/317 (26%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH- 94
N ++ Y RRG + A +LFD MP+ N SW T+I +G+ +E+L++F M +
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 95 ---------------------------------------YSWNMLVSAFAKSGDLQLAHS 115
Y N + ++K G + +A
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 116 LFDSMPCKNGLV-WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA 174
LF+ + + L WN++I + G +AL+LF M E DA +L AC
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQML---REGEKPDAVTFVGLLLAC- 327
Query: 175 DCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSL 234
VH ++V+G EL S V + +++ +
Sbjct: 328 ----------VHGGMVVKGQEL-------------------FKSMEEVHKISPKLEHY-- 356
Query: 235 SALVSGYANAGKMREARRVFDS-RVDQCAVLWNSIISGYVLNGE----EMEALALFKRMR 289
++ GK++EA + + + AV+W +++ +G E+ + ALFK
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 290 RHGVSGDVSTVANILSA 306
+ G+ ++NI +A
Sbjct: 417 TN--PGNCVIMSNIYAA 431
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEM-PQTNAFSWNTLI 70
L GR+L + G ++ + N ++ YS+ G +D A +LF+E+ Q N SWN++I
Sbjct: 231 LEIGRRLEGYARENGFFDN-IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 71 EAHLHSGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
+ G +E+L LF M + ++ L+ A G + LF SM + +
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA 174
+ +I + G ++A L KTM + P DA V T+LGAC+
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKP------DAVVWGTLLGACS 396
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 178/625 (28%), Positives = 304/625 (48%), Gaps = 69/625 (11%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM--- 151
Y L++ + K G + A LFD MP ++ +VWN +I GYS+ G+ A LF M
Sbjct: 86 YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
P A L +L C C ++ G+ VH G+EL D + ++L+ FY
Sbjct: 146 GFSP------SATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL--DSQVKNALISFYS 197
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA----RRVFDSRVDQCAVLWNS 267
KC +L SA + +K+ S + ++ Y+ +G EA + +F+ V+ V +
Sbjct: 198 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 257
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA--GCSLLVVELVKQMHAHACK 325
++S +V + E + L + + G+ D+S V +++ A C LV ++++A A +
Sbjct: 258 LLSAHV-SHEPLHCLVV-----KCGMVNDISVVTSLVCAYSRCGCLVS--AERLYASAKQ 309
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGE---------------------------- 357
IV ++++ Y++ A +F +
Sbjct: 310 ----DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Query: 358 ---LKAY--------DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAK 406
L Y T+++N +IT+YS +E ++F+ + LISWNS++ G +
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQ 425
Query: 407 NACPSEAIDIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHI 465
+ S A ++F +M + L D + AS+++ C+ CL LG+++ G + E ++
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENF 485
Query: 466 ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
+ T+L+D Y KCG VF + +WN+++ GY+ +G AL+ + EMR G
Sbjct: 486 VCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG 545
Query: 526 VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
++P ITF VLSAC+H G V+EG+ F M + I+P ++HY+ MV L RA EA
Sbjct: 546 LKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEA 605
Query: 586 IDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATS 645
+ LI +M + D+ +W ++L CI H +G+ A K+ LD +N G Y+ +SN+ AT
Sbjct: 606 LYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATE 665
Query: 646 EDWEGSAQVRELMIDKNVQKIPGCS 670
W+ +VR +M D G S
Sbjct: 666 AMWDDVVRVRNMMKDNGYDGYLGVS 690
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 31/224 (13%)
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
V+Q+ H K G+ + V ++LL+ Y K A F E+ DT++ N +I YS
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
G DA W +V L + PS + ++
Sbjct: 129 NGYECDA--------------WKLFIVMLQQGFSPSAT-----------------TLVNL 157
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
+ C + G V G A GLE D + +L+ FY KC + +F M
Sbjct: 158 LPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKST 217
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
VSWNT++ Y+ +G EA+T+F+ M V S +T +LSA
Sbjct: 218 VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
EQV GL+ + TSL++ Y K G V + +FD M + D V WN ++ GY+ N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT-MKHNYNINPEIE 567
GY +A LF M G PSA T +L C G V +GR++ K ++ +++
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 568 HYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNR----TIGKMAAEK 623
+ ++ Y++ LG A L EM ++ + W +++ G + T+ K EK
Sbjct: 190 N--ALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 624 IIQLDP 629
+++ P
Sbjct: 247 NVEISP 252
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 250/473 (52%), Gaps = 13/473 (2%)
Query: 206 LVKFYGKC---GDLDSAARVAGVVKEVDDFSLSALVSGYA-NAGKMREARRVFDSRVDQC 261
L K +C GD+D A RV ++ + + ++L+ G + + +M EA ++FD +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPD 123
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
+N ++S YV N +A + F RM + + + G EL M
Sbjct: 124 TFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM-- 181
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
+ + V +A++ Y + +A FF + MIT Y ++E
Sbjct: 182 ------MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 382 AKWIFDTMS-SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA 440
A+ +F M+ +K L++WN+++ G +N+ P + + +F M ++ + +S + C+
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 441 SKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNT 500
S L+LG Q+ L D TSL+ YCKCG + K+F+ M K D V+WN
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 355
Query: 501 ILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNY 560
++ GYA +G +AL LFREM + +RP ITF AVL AC+H GLV G F++M +Y
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDY 415
Query: 561 NINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMA 620
+ P+ +HY+CMVDL RAG L EA+ LI MPF+ A ++ ++L C H N + + A
Sbjct: 416 KVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA 475
Query: 621 AEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
AEK++QL+ +N Y+QL+N+ A+ WE A+VR+ M + NV K+PG SW +
Sbjct: 476 AEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIE 528
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 198/517 (38%), Gaps = 147/517 (28%)
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAM------------------------------ 89
Q F N +I + SG + +LR+FH M
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 90 --PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
PE +S+N+++S + ++ + + A S FD MP K+ WNT+I GY++RG KA L
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F +M +E ++V ++++
Sbjct: 178 FYSM--------------------------------------------MEKNEVSWNAMI 193
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF-DSRVDQCAVLWN 266
Y +CGDL+ A+ V + +A+++GY A K+ A +F D V++ V WN
Sbjct: 194 SGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 267 SIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
++ISGYV N + L LF+ M G+ + S +++ L L ++L +Q+H K
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
+ +D+ ++L+ Y K +A K F +K D + N MI+ Y+ G + A +F
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
M ++ D +F +V+ AC +
Sbjct: 374 REMIDNK-------------------------------IRPDWITFVAVLLACNHAGLVN 402
Query: 447 LGEQVFGKAI---TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILM 503
+G F + V + DH T +VD + G +E
Sbjct: 403 IGMAYFESMVRDYKVEPQPDHY--TCMVDLLGRAGKLE---------------------- 438
Query: 504 GYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
EAL L R M RP A F +L AC
Sbjct: 439 ---------EALKLIRSM---PFRPHAAVFGTLLGAC 463
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWN 67
IG + R + L I + N +L Y R + A FD MP +A SWN
Sbjct: 100 IGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN 159
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPC----- 122
T+I + G ++ LF++M EK SWN ++S + + GDL+ A F P
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA 219
Query: 123 ---------------------------KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
KN + WN +I GY + P L LF+ M L+
Sbjct: 220 WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LE- 277
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
E + ++ L++ L C++ AL G+Q+H IV L D +SL+ Y KCG+
Sbjct: 278 -EGIRPNSSGLSSALLGCSELSALQLGRQIHQ--IVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVD 259
L A ++ V+K+ D + +A++SGYA G +A +F +D
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L+ GRQ+H K+ + N +T L+ Y + G L DA +LF+ M + + +WN +I
Sbjct: 300 LQLGRQIHQIVSKSTLCND-VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 72 AHLHSGHRNESLRLFHAMPE-KTHYSWNMLVS---AFAKSGDLQLAHSLFDSM------- 120
+ G+ +++L LF M + K W V+ A +G + + + F+SM
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 121 PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
P + + ++ + G +AL L ++M P A V T+LGAC
Sbjct: 419 PQPDH--YTCMVDLLGRAGKLEEALKLIRSMPFRP------HAAVFGTLLGAC 463
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 189/308 (61%), Gaps = 1/308 (0%)
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
N+++ +Y+NCG + A +FD M K L++WNS++ G A+N P EA+ ++ MN +K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
D F+ S++SACA L LG++V I VGL + S L+D Y +CG VE + +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 487 FDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS-GVRPSAITFTAVLSACDHTGL 545
FD M+ + VSW ++++G A NG+G EA+ LF+ M + G+ P ITF +L AC H G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVL 605
V+EG F M+ Y I P IEH+ CMVDL ARAG + +A + I+ MP Q + +W ++L
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 606 RGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQK 665
C HG+ + + A +I+QL+P + G Y+ LSN+ A+ + W ++R+ M+ V+K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 666 IPGCSWAD 673
+PG S +
Sbjct: 327 VPGHSLVE 334
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 145/300 (48%), Gaps = 40/300 (13%)
Query: 235 SALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
++L+ YAN G + A +VFD ++ V WNS+I+G+ NG+ EALAL+ M G+
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 295 GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
D T+ ++LSA + + L K++H + K+G+T ++ ++ LLD Y++
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR---------- 136
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
CGR+E+AK +FD M K +SW S++VGLA N EAI
Sbjct: 137 ---------------------CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 175
Query: 415 DIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQVFGK---AITVGLEFDHIISTSL 470
++F M + L + +F ++ AC+ ++ G + F + + +H +
Sbjct: 176 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCM 233
Query: 471 VDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS 529
VD + G V+ + M ++ + V W T+L A +G L F ++ + P+
Sbjct: 234 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG--ACTVHGDSDLAEFARIQILQLEPN 291
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 36/194 (18%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
Y N L+ +A GD+ A+ +FD MP K+ + WN++I+G+++ G P +AL+L+ M+
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
++ D + ++L ACA AL GK+VH +I G+
Sbjct: 84 GIK---PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH--------------- 125
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
S + L+ YA G++ EA+ +FD VD+ +V W S+I G +
Sbjct: 126 ------------------SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 167
Query: 275 NGEEMEALALFKRM 288
NG EA+ LFK M
Sbjct: 168 NGFGKEAIELFKYM 181
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMG 504
+ LGE + I G + SL+ Y CG V KVFD M + D V+WN+++ G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 505 YATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINP 564
+A NG EAL L+ EM G++P T ++LSAC G + G+ + M +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVGLTR 122
Query: 565 EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAE 622
+ + ++DLYAR G + EA L +EM ++ W S++ G +G GK A E
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAIE 176
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 53/252 (21%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
+R G +H +++G S + N LL Y+ G + A ++FD+MP+ + +WN++I
Sbjct: 4 VRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 72 AHLHSGHRNESLRLFHAMPEK---------------------------TH---------- 94
+G E+L L+ M K H
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 95 --YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
+S N+L+ +A+ G ++ A +LFD M KN + W ++I G + G ++A+ LFK M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 153 ----LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSSLV 207
L P E+ +L AC+ C + G + R+ E IE + C +V
Sbjct: 183 STEGLLPCEI------TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC--MV 234
Query: 208 KFYGKCGDLDSA 219
+ G + A
Sbjct: 235 DLLARAGQVKKA 246
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 266/557 (47%), Gaps = 75/557 (13%)
Query: 116 LFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACAD 175
+F+ +P +WN +I GYS + + +S+ M L D V+ C++
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGL--ARPDEYTFPLVMKVCSN 122
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLS 235
+ G VH V+ G + D V+ +S V FYGKC DL SA
Sbjct: 123 NGQVRVGSSVHGLVLRIGFDK--DVVVGTSFVDFYGKCKDLFSA---------------- 164
Query: 236 ALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
R+VF ++ AV W +++ YV +GE EA ++F M +
Sbjct: 165 ---------------RKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGS 209
Query: 296 DVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFF 355
+AL+D KS A K F
Sbjct: 210 ---------------------------------------WNALVDGLVKSGDLVNAKKLF 230
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAID 415
E+ D I +MI Y+ G + A+ +F+ + +W+++++G A+N P+EA
Sbjct: 231 DEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFK 290
Query: 416 IFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFD-HIISTSLVDFY 474
+F M ++K D+F ++SAC+ C EL E+V +F H + +L+D
Sbjct: 291 VFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMN 350
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
KCG ++ K+F+ M + D VS+ +++ G A +G GSEA+ LF +M G+ P + FT
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFT 410
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPF 594
+L C + LVEEG F+ M+ Y+I +HYSC+V+L +R G L EA +LI+ MPF
Sbjct: 411 VILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPF 470
Query: 595 QADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQV 654
+A A+ W S+L GC HGN I ++ A + +L+P++ G+Y+ LSN+ A + W A +
Sbjct: 471 EAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHL 530
Query: 655 RELMIDKNVQKIPGCSW 671
R+ M + + KI G SW
Sbjct: 531 RDKMNENGITKICGRSW 547
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 160/365 (43%), Gaps = 61/365 (16%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
+R G +H L+ G + + + FY + L A ++F EMP+ NA SW L+
Sbjct: 126 VRVGSSVHGLVLRIG-FDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL----- 126
A++ SG E+ +F MPE+ SWN LV KSGDL A LFD MP ++ +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 127 --------------------------VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVH 160
W+ +I GY++ G P +A +F M + V
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC---AKNVK 301
Query: 161 CDAGVLATVLGACAD--CFALNCGK---QVHARVIVEGIELEFDK-VLCSSLVKFYGKCG 214
D ++ ++ AC+ CF L C K +H R+ +F + +L+ KCG
Sbjct: 302 PDEFIMVGLMSACSQMGCFEL-CEKVDSYLHQRMN------KFSSHYVVPALIDMNAKCG 354
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
+D AA++ + + D S +++ G A G EA R+F+ VD+ ++ + + +L
Sbjct: 355 HMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE-GIVPDEVAFTVIL 413
Query: 275 N--GEEM---EALALFKRMRRH----GVSGDVSTVANILSAGCSLL-VVELVKQM--HAH 322
G+ E L F+ MR+ S + N+LS L EL+K M AH
Sbjct: 414 KVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAH 473
Query: 323 ACKIG 327
A G
Sbjct: 474 ASAWG 478
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 236/442 (53%), Gaps = 34/442 (7%)
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAV---LWNSIISGYVLNGEEMEALALFKRMRR 290
LS L++ ++ ++ AR++FD D + +W ++ GY NG +AL ++ M
Sbjct: 170 LSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLC 229
Query: 291 HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
+ +++ L A L + + + +HA K
Sbjct: 230 SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVK------------------------- 264
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
+ D ++ N ++ +Y G +DA+ +FD MS + +++WNS++ L+K
Sbjct: 265 ------RKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRV 318
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
E ++F +M + + +++ AC+ + L G+++ + + + D + SL
Sbjct: 319 HEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSL 378
Query: 471 VDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSA 530
+D Y KCG VE R+VFD M+ D SWN +L YA NG E + LF M SGV P
Sbjct: 379 MDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDG 438
Query: 531 ITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIE 590
ITF A+LS C TGL E G +LF+ MK + ++P +EHY+C+VD+ RAG + EA+ +IE
Sbjct: 439 ITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIE 498
Query: 591 EMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEG 650
MPF+ A++W S+L C HGN ++G++AA+++ L+P NPG Y+ +SN+ A ++ W+
Sbjct: 499 TMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDN 558
Query: 651 SAQVRELMIDKNVQKIPGCSWA 672
++RE+M + V+K GCSW
Sbjct: 559 VDKIREMMKQRGVKKEAGCSWV 580
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 208/501 (41%), Gaps = 116/501 (23%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGL---VWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
L++ F+ L LA +FD + + L VW + GYS+ G PR AL ++ M +
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
E + ++ L AC D L G+ +HA+++ + + D+V+ + L+K Y + G
Sbjct: 233 EPGNFS---ISVALKACVDLKDLRVGRGIHAQIVKR--KEKVDQVVYNVLLKLYMESGLF 287
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
D +AR+VFD ++ V WNS+IS
Sbjct: 288 D-------------------------------DARKVFDGMSERNVVTWNSLISVLSKKV 316
Query: 277 EEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV-KQMHAHACKIGVTHDIVVA 335
E LF++M+ + +T+ IL A CS + L K++HA
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPA-CSRVAALLTGKEIHAQ------------- 362
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
+L + K P LLN+++ +Y CG +E ++ +FD M +K L
Sbjct: 363 --ILKSKEKPDVP----------------LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLA 404
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
SWN +L A N E I++F M + D +F +++S C+ E G +F +
Sbjct: 405 SWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM 464
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
T EF +S +L + C +GR G IK EA+
Sbjct: 465 KT---EFR--VSPALEHYACLVDI--LGRA---GKIK--------------------EAV 494
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG----RNLFDTMKHNYNINPEIEHYSC 571
+ M +PSA + ++L++C G V G + LF HN +Y
Sbjct: 495 KVIETM---PFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPG------NYVM 545
Query: 572 MVDLYARAGCLGEAIDLIEEM 592
+ ++YA A + + +D I EM
Sbjct: 546 VSNIYADAK-MWDNVDKIREM 565
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 17/260 (6%)
Query: 42 YSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRL---FHAMPEKT----- 93
YSR G DA ++ +M + N I L + + LR+ HA K
Sbjct: 211 YSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVD 270
Query: 94 HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
+N+L+ + +SG A +FD M +N + WN++I SK+ + +LF+ M
Sbjct: 271 QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
EM+ L T+L AC+ AL GK++HA+++ + + D L +SL+ YGKC
Sbjct: 331 ---EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS--KEKPDVPLLNSLMDMYGKC 385
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF----DSRVDQCAVLWNSII 269
G+++ + RV V+ D S + +++ YA G + E +F +S V + + +++
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 270 SGYVLNGEEMEALALFKRMR 289
SG G L+LF+RM+
Sbjct: 446 SGCSDTGLTEYGLSLFERMK 465
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 204/717 (28%), Positives = 312/717 (43%), Gaps = 134/717 (18%)
Query: 12 LREGRQLHVSFLKTGI--LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
L+ RQ+H L G S N L+ Y R G L+ A ++FD+MP N S+N L
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTH----------------------------------- 94
A+ RN + A P TH
Sbjct: 170 YSAY----SRNPDFASY-AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQ 224
Query: 95 -----YSWNMLVSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKA 144
YS N++V ++ GDL+ A +FD + ++ + WNT+I G K
Sbjct: 225 IIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDG 284
Query: 145 LSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
L F+ M +DP + + + VL C+ + + GK +HAR+IV
Sbjct: 285 LMFFRNMLMSGVDPTQFTY------SIVLNGCSKLGSYSLGKLIHARIIVS--------- 329
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSL-SALVSGYANAGKMREARRVFDSRVDQ 260
DS A D L +AL+ Y + G MREA VF +
Sbjct: 330 ---------------DSLA----------DLPLDNALLDMYCSCGDMREAFYVFGRIHNP 364
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS-GDVSTVANILSAGCSLLVVELVKQM 319
V WNSIISG NG +A+ +++R+ R D T + +SA K +
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 320 HAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRI 379
H K+G + V + LL Y K++
Sbjct: 425 HGQVTKLGYERSVFVGTTLLSMYFKNR-------------------------------EA 453
Query: 380 EDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISAC 439
E A+ +FD M + ++ W ++VG ++ A+ F M + D FS +SVI AC
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 440 ASKSCLELGEQVFGKAITVGLEFDHIIST--SLVDFYCKCGFVEIGRKVFDGMIKTDEVS 497
+ + L GE AI G FD ++S +LVD Y K G E +F D
Sbjct: 514 SDMAMLRQGEVFHCLAIRTG--FDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC 571
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK 557
WN++L Y+ +G +AL+ F ++ +G P A+T+ ++L+AC H G +G+ L++ MK
Sbjct: 572 WNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK 631
Query: 558 HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPF-QADANMWFSVLRGCIAHGNRTI 616
I +HYSCMV+L ++AG + EA++LIE+ P A +W ++L C+ N I
Sbjct: 632 EQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQI 690
Query: 617 GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
G AAE+I++LDPE+ +I LSN+ A + WE A++R + K PG SW +
Sbjct: 691 GLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIE 747
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 199/454 (43%), Gaps = 74/454 (16%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKN-----GL--VWNTIIHGYSKRGHPRKALSL 147
Y+ N L+S + + L+ A +FD MP +N GL V+ + G S K L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIK-LGS 81
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F+ + PL + A + + C L +Q+HA V+ G
Sbjct: 82 FQMIFFMPLNEI---ASSVVELTRKCVSITVLKRARQIHALVLTAG-------------- 124
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
AG E ++ + L+S Y G + +AR+VFD + V +N+
Sbjct: 125 ---------------AGAATE-SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNA 168
Query: 268 IISGYVLNGE-EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
+ S Y N + A L M V + ST +++ L V + +++ K+
Sbjct: 169 LYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKL 228
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
G + ++VV +++L +YS+CG +E A+ IF
Sbjct: 229 GYSDNVVVQTSVLG-------------------------------MYSSCGDLESARRIF 257
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
D ++++ ++WN+++VG KN + + F M M + +F+++ V++ C+
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 447 LGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYA 506
LG+ + + I D + +L+D YC CG + VF + + VSWN+I+ G +
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 507 TNGYGSEALTLFRE-MRCSGVRPSAITFTAVLSA 539
NG+G +A+ ++R +R S RP TF+A +SA
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 188/417 (45%), Gaps = 37/417 (8%)
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAV--LWNSIISGYVLNGEEMEA----LALFKRMRR 290
L+S Y + +AR+VFD + V S + YV G + + L F+ +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 291 HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
++ S+V + S+ V++ +Q+HA G A + ++ P+
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAG-------------AGAATESPYA 134
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA-C 409
N +I++Y CG +E A+ +FD M + ++S+N++ ++N
Sbjct: 135 N---------------NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDF 179
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
S A + M +K + +F S++ CA + +G + + I +G + ++ TS
Sbjct: 180 ASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTS 239
Query: 470 LVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS 529
++ Y CG +E R++FD + D V+WNT+++G N + L FR M SGV P+
Sbjct: 240 VLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPT 299
Query: 530 AITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLI 589
T++ VL+ C G G+ + + + ++ ++ + ++D+Y G + EA +
Sbjct: 300 QFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL-ADLPLDNALLDMYCSCGDMREAFYVF 358
Query: 590 EEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE 646
+ + W S++ GC +G + +++++ P Y + + AT+E
Sbjct: 359 GRI-HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 204/719 (28%), Positives = 321/719 (44%), Gaps = 130/719 (18%)
Query: 5 LQGIGRTLREGRQLHVSFLKTGILN-----SSLTTANRLLQFYSRRGCLDDATQLFDEMP 59
+ G R G Q + F+ + S L N + FY + G L + FD M
Sbjct: 29 VSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMN 88
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAMP-------------------------EKTH 94
++ SWN ++ L G E L F + EK H
Sbjct: 89 SRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIH 148
Query: 95 ------------YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
N ++ +A S L A LFD M ++ + W+ +I Y + P
Sbjct: 149 GYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPV 207
Query: 143 KALSLFKTMSLDPLEMVH-----CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE 197
L LFK EMVH D + +VL AC ++ G+ VH I G +L
Sbjct: 208 VGLKLFK-------EMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSR 257
D +C+SL+ Y K D+DSA R VFD
Sbjct: 261 -DVFVCNSLIDMYSKGFDVDSAFR-------------------------------VFDET 288
Query: 258 VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVEL-V 316
+ V WNSI++G+V N EAL +F M + V D TV ++L C L
Sbjct: 289 TCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRV-CKFFEQPLPC 347
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
K +H + G + V S+L+DAY+ +C
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYT-------------------------------SC 376
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
++DA + D+M+ K ++S ++++ GLA EAI IFC M + + S++
Sbjct: 377 SLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLL 433
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHI-ISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
+AC+ + L + G AI L + I + TS+VD Y KCG +E+ R+ FD + + +
Sbjct: 434 NACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNI 493
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT 555
+SW I+ YA NG +AL LF EM+ G P+A+T+ A LSAC+H GLV++G +F +
Sbjct: 494 ISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKS 553
Query: 556 MKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMP--FQADANMWFSVLRGCIAHGN 613
M + P ++HYSC+VD+ +RAG + A++LI+ +P +A A+ W ++L GC
Sbjct: 554 MVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFK 612
Query: 614 RTI--GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+ I ++ AE +++L+P Y+ S+ A + WE A +R L+ ++ V+ + G S
Sbjct: 613 KLIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYS 670
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 232/424 (54%), Gaps = 12/424 (2%)
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVV- 313
+ + V W S I+ NG EA F M GV + T +LS GC
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS-GCGDFTSG 87
Query: 314 --ELVKQMHAHACKIGVTHD-IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMI 370
L +H +ACK+G+ + ++V +A++ YSK +A F ++ +++ NTMI
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 371 TVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
Y G++++A +FD M + LISW +++ G K EA+ F M + +K D
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
+ + ++AC + L G V ++ + + +S SL+D YC+CG VE R+VF M
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR 550
K VSWN++++G+A NG E+L FR+M+ G +P A+TFT L+AC H GLVEEG
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 551 NLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIA 610
F MK +Y I+P IEHY C+VDLY+RAG L +A+ L++ MP + + + S+L C
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 611 HGNRTIGKMAAEKIIQ----LDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKI 666
HGN + AE++++ L+ ++ Y+ LSN+ A WEG++++R M ++K
Sbjct: 388 HGNNIV---LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 444
Query: 667 PGCS 670
PG S
Sbjct: 445 PGFS 448
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 173/391 (44%), Gaps = 49/391 (12%)
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN--CGKQV 185
W + I+ ++ G +A F M+L +E H +L C D + + G +
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHI---TFIALLSGCGDFTSGSEALGDLL 95
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAG 245
H G++ V ++++ Y K G A V +++ + + + ++ GY +G
Sbjct: 96 HGYACKLGLDRNHVMV-GTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 246 KMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
++ A ++FD ++ + W ++I+G+V G + EAL F+ M+ GV D + L+
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 306 AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL 365
A +L + +H + +++ V+++L+D Y +
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCR--------------------- 253
Query: 366 LNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDL 425
CG +E A+ +F M +T++SWNS++VG A N E++ F +M
Sbjct: 254 ----------CGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGF 303
Query: 426 KMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS------LVDFYCKCGF 479
K D +F ++AC+ +E G + F ++ D+ IS LVD Y + G
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQI-----MKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 480 VEIGRKVFDGM-IKTDEVSWNTILMGYATNG 509
+E K+ M +K +EV ++L + +G
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 153/366 (41%), Gaps = 71/366 (19%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G LH K G+ + + ++ YS+RG A +FD M N+ +WNT+I+ ++
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 75 HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHG 134
SG + + ++F MPE+ SW +I+G
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISW-------------------------------TAMING 180
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI 194
+ K+G+ +AL F+ M + V D + L AC + AL+ G VH V+ +
Sbjct: 181 FVKKGYQEEALLWFREMQISG---VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQ-- 235
Query: 195 ELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
+ + + + +SL+ Y +CG ++ AR+VF
Sbjct: 236 DFKNNVRVSNSLIDLYCRCGCVEF-------------------------------ARQVF 264
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL--LV 312
+ + V WNS+I G+ NG E+L F++M+ G D T L+A CS LV
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA-CSHVGLV 323
Query: 313 VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY-DTILLNTMIT 371
E ++ C ++ I L+D YS++ +A K + + +++ +++
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 372 VYSNCG 377
SN G
Sbjct: 384 ACSNHG 389
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 114/289 (39%), Gaps = 66/289 (22%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWN 67
IG + GR + + + + T N ++ Y R G +D+A ++FD+MP+ + SW
Sbjct: 116 IGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWT 175
Query: 68 TLIEAHLHSGHRNESLRLFHAMP---EKTHYS-------------------W-------- 97
+I + G++ E+L F M K Y W
Sbjct: 176 AMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQ 235
Query: 98 ---------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
N L+ + + G ++ A +F +M + + WN++I G++ G+ ++L F
Sbjct: 236 DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYF 295
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSS--- 205
+ M + DA L AC+ H ++ EG+ F + C
Sbjct: 296 RKMQEKGFK---PDAVTFTGALTACS-----------HVGLVEEGLRY-FQIMKCDYRIS 340
Query: 206 --------LVKFYGKCGDLDSAAR-VAGVVKEVDDFSLSALVSGYANAG 245
LV Y + G L+ A + V + + ++ + +L++ +N G
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 285/578 (49%), Gaps = 72/578 (12%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
+ML+ + K GD++ A LFD + ++ + W +I +S+ G+ AL LFK M E
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR---E 107
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
V + +VL +C D L G Q+H V +K C+ G+L
Sbjct: 108 DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV---------EKGNCA---------GNL- 148
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
+V+ SAL+S YA GKM EAR FDS ++ V WN++I GY N
Sbjct: 149 -------IVR-------SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASA 337
+ +LF+ M G D T ++L A + +E+V ++H A K+G
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLG---------- 244
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
FG A L+ +++ Y CG + +A + + + L+S
Sbjct: 245 -----------------FGRSSA----LIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 398 NSILVGLAK-NACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
+++ G ++ N C S+A DIF M + KMD+ +S++ C + + + +G Q+ G A+
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFAL 343
Query: 457 -TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
+ + FD + SL+D Y K G +E F+ M + D SW +++ GY +G +A+
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAI 403
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDL 575
L+ M ++P+ +TF ++LSAC HTG E G ++DTM + + I EH SC++D+
Sbjct: 404 DLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDM 463
Query: 576 YARAGCLGEAIDLI--EEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPG 633
AR+G L EA LI +E ++ W + L C HGN + K+AA +++ ++P P
Sbjct: 464 LARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPV 523
Query: 634 AYIQLSNVLATSEDWEGSAQVRELMIDK-NVQKIPGCS 670
YI L++V A + W+ + R+LM + + K PG S
Sbjct: 524 NYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 219/518 (42%), Gaps = 107/518 (20%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWN 67
L++G H L I + + ++ +SR G DA LF EM + N F++
Sbjct: 58 LKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYG 117
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLV-----SAFAKSGDLQLAHSLFDSMPC 122
+++++ G E +++ H EK + + N++V S +A+ G ++ A FDSM
Sbjct: 118 SVLKSCKDLGCLKEGMQI-HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 123 KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCG 182
++ + WN +I GY+ + SLF+ M + G DCF G
Sbjct: 177 RDLVSWNAMIDGYTANACADTSFSLFQLMLTE----------------GKKPDCFTF--G 218
Query: 183 KQVHARVIVE-----------GIELEFDK--VLCSSLVKFYGKCGDLDSAARVAGVVKEV 229
+ A ++V+ I+L F + L SLV Y KCG L +A ++ K+
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D S +AL++G+ S+ + C +A +FK M
Sbjct: 279 DLLSCTALITGF--------------SQQNNCTS----------------DAFDIFKDMI 308
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTHDIVVASALLDAYSKSQGP 348
R D V+++L ++ V + +Q+H A K + D+ + ++L+D Y+KS
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS--- 365
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
G IEDA F+ M K + SW S++ G ++
Sbjct: 366 ----------------------------GEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHG 397
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV-GLEFDHIIS 467
+AID++ RM +K + +F S++SAC+ ELG +++ I G+E
Sbjct: 398 NFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHL 457
Query: 468 TSLVDFYCKCGFVEIGRKVF---DGMIKTDEVSWNTIL 502
+ ++D + G++E + +G++ +W L
Sbjct: 458 SCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 96/175 (54%)
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD 424
L + +I +Y G ++ A+ +FD +S + ++SW +++ ++ +A+ +F M+ D
Sbjct: 49 LKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED 108
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
+K ++F++ SV+ +C CL+ G Q+ G + I+ ++L+ Y +CG +E R
Sbjct: 109 VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
FD M + D VSWN ++ GY N + +LF+ M G +P TF ++L A
Sbjct: 169 LQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 451 VFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGY 510
+ G +IT G + + L+D Y K G V+ RK+FD + K D VSW ++ ++ GY
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 511 GSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYS 570
+AL LF+EM V+ + T+ +VL +C G ++EG + +++ N + S
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKG-NCAGNLIVRS 152
Query: 571 CMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
++ LYAR G + EA + M + D W +++ G A+
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYTANA 193
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/574 (29%), Positives = 268/574 (46%), Gaps = 68/574 (11%)
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
WN L+S +AK G L A LFD MP ++ + N + +G+ + L K M L
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM----L 148
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
D L VL C K +HA I+ G + E + + L+ Y KCG
Sbjct: 149 GSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEIS--VGNKLITSYFKCG-- 204
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
VSG R VFD + + ++ISG + N
Sbjct: 205 -------------------CSVSG----------RGVFDGMSHRNVITLTAVISGLIENE 235
Query: 277 EEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVAS 336
+ L LF MRR V + T + L+A + +Q+HA K G+ ++ + S
Sbjct: 236 LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIES 295
Query: 337 ALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS 396
AL+D YSK CG IEDA IF++ + +S
Sbjct: 296 ALMDMYSK-------------------------------CGSIEDAWTIFESTTEVDEVS 324
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
ILVGLA+N EAI F RM +++D ++V+ + L LG+Q+ I
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVI 384
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALT 516
+ ++ L++ Y KCG + + VF M K + VSWN+++ +A +G+G AL
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 517 LFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLY 576
L+ EM V+P+ +TF ++L AC H GL+++GR L + MK + I P EHY+C++D+
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 577 ARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYI 636
RAG L EA I+ +P + D +W ++L C HG+ +G+ AAE++ Q P++ A+I
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 637 QLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
++N+ ++ W+ A+ + M V K G S
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
++ N+++++Y+ CG++ DA +FD M + +IS N + G +N + RM +
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-LG 149
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
D + V+S C + + + + AI G + + + L+ Y KCG G
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
R VFDGM + ++ ++ G N + L LF MR V P+++T+ + L+AC +
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIE 590
+ EG+ + + Y I E+ S ++D+Y++ G + +A + E
Sbjct: 270 QRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 150/357 (42%), Gaps = 58/357 (16%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
EG+Q+H K GI S L + L+ YS+ G ++DA +F+ + + S ++
Sbjct: 274 EGQQIHALLWKYGI-ESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 74 LHSGHRNESLRLF----------------------------------HAMPEKTHYSWNM 99
+G E+++ F H++ K +S N
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 100 -----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
L++ ++K GDL + ++F MP +N + WN++I +++ GH AL L++ M+
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT-- 450
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVI-VEGIELEFDKVLCSSLVKFYGKC 213
LE+ D L ++L AC+ ++ G+++ + V GIE + C ++ G+
Sbjct: 451 TLEVKPTDVTFL-SLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC--IIDMLGRA 507
Query: 214 GDLDSAARVAGVVKEVDDFSL-SALVSGYANAGKMR----EARRVFDSRVDQCA--VLWN 266
G L A + D + AL+ + G A ++F + D + +L
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA 567
Query: 267 SIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
+I Y G+ E KRM+ GV+ + + + VVE ++H A
Sbjct: 568 NI---YSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVE--DKLHPQA 619
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 76/320 (23%)
Query: 29 NSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHA 88
+ ++ N+L+ Y + GC +FD M N + +I + + + LRLF
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSL 246
Query: 89 M------PEKTHY----------------------SW-----------NMLVSAFAKSGD 109
M P Y W + L+ ++K G
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGS 306
Query: 110 LQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATV 169
++ A ++F+S + + I+ G ++ G +A+ F M +E+ DA V++ V
Sbjct: 307 IEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI---DANVVSAV 363
Query: 170 LGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV 229
LG +L GKQ+H+ VI + + + + L+ Y KCGDL
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKR--KFSGNTFVNNGLINMYSKCGDLT------------ 409
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
+++ VF + V WNS+I+ + +G + AL L++ M
Sbjct: 410 -------------------DSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 290 RHGVSGDVSTVANILSAGCS 309
V T ++L A CS
Sbjct: 451 TLEVKPTDVTFLSLLHA-CS 469
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWN 67
I +L G+QLH +K ++ N L+ YS+ G L D+ +F MP+ N SWN
Sbjct: 369 IDNSLGLGKQLHSLVIKRKFSGNTFVN-NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWN 427
Query: 68 TLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK 123
++I A GH +L+L+ M + T ++ L+ A + G + L + M
Sbjct: 428 SMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEV 487
Query: 124 NGLVWNT-----IIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA 174
+G+ T II + G ++A S ++ L P D + +LGAC+
Sbjct: 488 HGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP------DCKIWQALLGACS 537
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/709 (26%), Positives = 326/709 (45%), Gaps = 129/709 (18%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L+ G Q+H F T S + +N ++ Y + G D+A +F+ + + SWNT++
Sbjct: 92 LKRGCQIH-GFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL- 149
Query: 72 AHLHSGHRNESLRL------------FHAMPEKTHYSW---------------------- 97
SG + + L F A T S+
Sbjct: 150 ----SGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL 205
Query: 98 -------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRG-HPRKALSLFK 149
N ++ +++SG + A +FD M K+ + WN+++ G S+ G +A+ +F+
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE--LEFDKVLCSSLV 207
M + +E+ H +V+ C L +Q+H I G E LE +L S
Sbjct: 266 DMMREGVELDHVS---FTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR-- 320
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
Y KCG L++ + VF ++ V W +
Sbjct: 321 --YSKCGVLEAV-------------------------------KSVFHQMSERNVVSWTT 347
Query: 268 IISGYVLNGEEMEALALFKRMRRHGV-SGDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
+IS + +A+++F MR GV +V+ V I + C+ + E +K +H K
Sbjct: 348 MISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK-IHGLCIKT 401
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
G + V N+ IT+Y+ +EDAK F
Sbjct: 402 GFVSEPSVG-------------------------------NSFITLYAKFEALEDAKKAF 430
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA--SKSC 444
+ ++ + +ISWN+++ G A+N EA+ +F + ++++F SV++A A
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDIS 489
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMG 504
++ G++ + +GL ++S++L+D Y K G ++ KVF+ M + ++ W +I+
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISA 549
Query: 505 YATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINP 564
Y+++G + LF +M V P +TF +VL+AC+ G+V++G +F+ M YN+ P
Sbjct: 550 YSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEP 609
Query: 565 EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKI 624
EHYSCMVD+ RAG L EA +L+ E+P +M S+L C HGN +G AE
Sbjct: 610 SHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELA 669
Query: 625 IQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
+++ PE G+Y+Q+ N+ A E+W+ +A++R+ M KNV K G SW D
Sbjct: 670 MEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWID 718
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 382 AKWIFDTMSSKTLISW--NSILVGLAKNACPSEAIDIF---CRMNMLDLKMDKFSFASVI 436
A +FD S + + +SI L +N+ P+ A+ IF ++ MD+ + +
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNS-PARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV 496
AC + L+ G Q+ G + T G +S +++ Y K G + +F+ ++ D V
Sbjct: 86 KAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
SWNTIL G+ N AL M+ +GV A T++ LS C + G L T+
Sbjct: 144 SWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ ++ + + +Y+R+G A + +EM F+ D W S+L G G
Sbjct: 201 VKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSGLSQEG 254
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 38/261 (14%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
++++G++ H LK G LNS ++ LL Y++RG +D++ ++F+EM Q N F W ++I
Sbjct: 489 SVKQGQRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSII 547
Query: 71 EAHLHSGHRNESLRLFHAMPEKT----HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
A+ G + LFH M ++ ++ +++A + G + + +F+ M L
Sbjct: 548 SAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNL 607
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
++ ++ + G ++A L + P E +L ++LG+C L+
Sbjct: 608 EPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGE------SMLQSMLGSC----RLHG 657
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYG---------KCGDLDSAARVAGVVKE---- 228
++ A+ V + +E L S V+ Y K ++ A R V KE
Sbjct: 658 NVKMGAK--VAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFS 715
Query: 229 ---VDDFSLSALVSGYANAGK 246
V D S + G+++ K
Sbjct: 716 WIDVGDTEGSLTMQGFSSGDK 736
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 244/446 (54%), Gaps = 5/446 (1%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEME---ALALFK 286
D+ +++ + +NAG +R A VF + L N++I L E A+ +++
Sbjct: 46 DNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 287 RMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
++ D T +L + V +Q+H G + V + L+ Y
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG 165
Query: 347 GPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS--SKTLISWNSILVGL 404
G +A K F E+ D + N ++ Y G +++A+ + + M + +SW ++ G
Sbjct: 166 GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGY 225
Query: 405 AKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
AK+ SEAI++F RM M +++ D+ + +V+SACA LELGE++ G+
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 465 IISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS 524
++ +++D Y K G + VF+ + + + V+W TI+ G AT+G+G+EAL +F M +
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKA 345
Query: 525 GVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
GVRP+ +TF A+LSAC H G V+ G+ LF++M+ Y I+P IEHY CM+DL RAG L E
Sbjct: 346 GVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLRE 405
Query: 585 AIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLAT 644
A ++I+ MPF+A+A +W S+L H + +G+ A ++I+L+P N G Y+ L+N+ +
Sbjct: 406 ADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSN 465
Query: 645 SEDWEGSAQVRELMIDKNVQKIPGCS 670
W+ S +R +M V+K+ G S
Sbjct: 466 LGRWDESRMMRNMMKGIGVKKMAGES 491
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 194/415 (46%), Gaps = 53/415 (12%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRK---ALSLFK---TMSL 153
+ A + +G L+ A+S+F PC N + NT+I S P A+++++ +
Sbjct: 53 FIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCA 112
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
P D VL + G+Q+H +V+V G + V + L++ Y C
Sbjct: 113 KP------DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV--TGLIQMYFSC 164
Query: 214 GDLDSAARVAG--VVKEVDDFSLSALVSGYANAGKMREARRVFDSRV--DQCAVLWNSII 269
G L A ++ +VK+V+ ++ AL++GY G+M EAR + + + V W +I
Sbjct: 165 GGLGDARKMFDEMLVKDVNVWN--ALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVI 222
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
SGY +G EA+ +F+RM V D T+ +LSA L +EL +++ ++ G+
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN 282
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
+ + +A++D Y+KS G I A +F+ +
Sbjct: 283 RAVSLNNAVIDMYAKS-------------------------------GNITKALDVFECV 311
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGE 449
+ + +++W +I+ GLA + +EA+ +F RM ++ + +F +++SAC+ ++LG+
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Query: 450 QVFGKAIT-VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
++F + G+ + ++D + G + +V M K + W ++L
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 137/340 (40%), Gaps = 71/340 (20%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GRQ+H + G +SS+ L+Q Y G L DA ++FDEM + WN L+ +
Sbjct: 135 GRQIHGQVVVFG-FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 75 HSGHRNESLRLFHAMP--EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTII 132
G +E+ L MP + SW ++S +AKSG A +F M +N
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN-------- 245
Query: 133 HGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE 192
V D L VL ACAD +L G+++
Sbjct: 246 --------------------------VEPDEVTLLAVLSACADLGSLELGERI------- 272
Query: 193 GIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARR 252
CS + D R + V D YA +G + +A
Sbjct: 273 ----------CSYV--------DHRGMNRAVSLNNAVIDM--------YAKSGNITKALD 306
Query: 253 VFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLV 312
VF+ ++ V W +II+G +G EALA+F RM + GV + T ILSA +
Sbjct: 307 VFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366
Query: 313 VELVKQM-HAHACKIGVTHDIVVASALLDAYSKSQGPHEA 351
V+L K++ ++ K G+ +I ++D ++ EA
Sbjct: 367 VDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 245/456 (53%), Gaps = 8/456 (1%)
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
D+ A+R+ + + F+ + GYA +F + ++N +I +
Sbjct: 43 DVFVASRLLALCVDDSTFNKPTNLLGYAYG--------IFSQIQNPNLFVFNLLIRCFST 94
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVV 334
E +A + +M + + D T ++ A + V + +Q H+ + G +D+ V
Sbjct: 95 GAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYV 154
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
++L+ Y+ A + FG++ D + +M+ Y CG +E+A+ +FD M + L
Sbjct: 155 ENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNL 214
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
+W+ ++ G AKN C +AID+F M + ++ SVIS+CA LE GE+ +
Sbjct: 215 FTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEY 274
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
+ + + I+ T+LVD + +CG +E VF+G+ +TD +SW++I+ G A +G+ +A
Sbjct: 275 VVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
+ F +M G P +TFTAVLSAC H GLVE+G +++ MK ++ I P +EHY C+VD
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 575 LYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA 634
+ RAG L EA + I +M + +A + ++L C + N + + +I++ PE+ G
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 635 YIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
Y+ LSN+ A + W+ +R++M +K V+K PG S
Sbjct: 455 YVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 223/513 (43%), Gaps = 89/513 (17%)
Query: 83 LRLFHAMPEKTHYSWNMLV-----------SAFAKSGDL-QLAHSLFDSMPCKNGLVWNT 130
L++ H +TH ++ V S F K +L A+ +F + N V+N
Sbjct: 28 LKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNL 87
Query: 131 IIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVI 190
+I +S P KA + M + D ++ A ++ + G+Q H++++
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKS---RIWPDNITFPFLIKASSEMECVLVGEQTHSQIV 144
Query: 191 VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
G + D + +SLV Y CG + +A R+ G + D S +++V+GY G + A
Sbjct: 145 RFG--FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENA 202
Query: 251 RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
R +FD + W+ +I+GY N +A+ LF+ M+R GV + + + +++S+ L
Sbjct: 203 REMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHL 262
Query: 311 LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMI 370
+E ++ + + K +T ++++ +AL+D + +
Sbjct: 263 GALEFGERAYEYVVKSHMTVNLILGTALVDMFWR-------------------------- 296
Query: 371 TVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
CG IE A +F+ + +SW+SI+ GLA + +A+ F +M L
Sbjct: 297 -----CGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
+F +V+SAC+ +E G +++ ++ DH I L + C + D
Sbjct: 352 TFTAVLSACSHGGLVEKGLEIYEN-----MKKDHGIEPRLEHYGC----------IVD-- 394
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC---DHTGLVE 547
++G A G +EA +M V+P+A A+L AC +T + E
Sbjct: 395 -----------MLGRA--GKLAEAENFILKMH---VKPNAPILGALLGACKIYKNTEVAE 438
Query: 548 EGRNLFDTMKHNYNINPEIEHYSCMVDLYARAG 580
N+ +K ++ +Y + ++YA AG
Sbjct: 439 RVGNMLIKVKPEHS-----GYYVLLSNIYACAG 466
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 10/239 (4%)
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDS 119
Q + + N+L+ + + G + R+F M + SW +V+ + K G ++ A +FD
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 120 MPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFAL 179
MP +N W+ +I+GY+K KA+ LF+ M E V + V+ +V+ +CA AL
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK---REGVVANETVMVSVISSCAHLGAL 265
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVS 239
G++ + V+ + + +L ++LV + +CGD++ A V + E D S S+++
Sbjct: 266 EFGERAYEYVVKSHMTVNL--ILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 240 GYANAGKMREARRVFDSRVD----QCAVLWNSIISGYVLNGEEMEALALFKRMRR-HGV 293
G A G +A F + V + +++S G + L +++ M++ HG+
Sbjct: 324 GLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGI 382
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 173/580 (29%), Positives = 278/580 (47%), Gaps = 80/580 (13%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPC--KNGLVWNTIIHGYSKRGH--PRKALSLFKTMSLDP 155
L +A+ +S L A S F+ +PC +N WNTI+ GYSK L L+ M
Sbjct: 45 LTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR-- 102
Query: 156 LEMVHCDAGV----LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
HCD GV L + AC L G +H + G+ DK
Sbjct: 103 ----HCD-GVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGL----DK----------- 142
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
DD+ +LV YA G M A++VFD + +VLW ++ G
Sbjct: 143 ------------------DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTH 330
Y+ ++ E LF MR G++ D T+ ++ A C + A K+G H
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKA-CG----------NVFAGKVGKCVH 233
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
+ + + +D Q ++I +Y C +++A+ +F+T
Sbjct: 234 GVSIRRSFIDQSDYLQA--------------------SIIDMYVKCRLLDNARKLFETSV 273
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
+ ++ W +++ G AK EA D+F +M + ++ + A+++ +C+S L G+
Sbjct: 274 DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKS 333
Query: 451 VFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGY 510
V G I G+E D + TS +D Y +CG +++ R VFD M + + +SW++++ + NG
Sbjct: 334 VHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGL 393
Query: 511 GSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYS 570
EAL F +M+ V P+++TF ++LSAC H+G V+EG F++M +Y + PE EHY+
Sbjct: 394 FEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYA 453
Query: 571 CMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPE 630
CMVDL RAG +GEA I+ MP + A+ W ++L C H + AEK++ ++PE
Sbjct: 454 CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPE 513
Query: 631 NPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
Y+ LSN+ A + WE VR M K +K G S
Sbjct: 514 KSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 224/546 (41%), Gaps = 126/546 (23%)
Query: 9 GRTLREGRQLHVSFLKTG-----ILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP--QT 61
+TL +Q+H + G +L SSLT A Y + LD AT F+ +P +
Sbjct: 17 AKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNA------YIQSNRLDFATSSFNRIPCWKR 70
Query: 62 NAFSWNTLIEAH-------------LHSGHRN-----ESLRLFHAMP------------- 90
N SWNT++ + L++ R +S L A+
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 91 ----------EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGH 140
+K Y LV +A+ G ++ A +FD +P +N ++W ++ GY K
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 141 PRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK 200
+ LF M L + DA L ++ AC + FA GK VH I ++
Sbjct: 191 DPEVFRLFCLMRDTGLAL---DALTLICLVKACGNVFAGKVGKCVHGVSIRRSF-IDQSD 246
Query: 201 VLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ 260
L +S++ Y KC LD+ AR++F++ VD+
Sbjct: 247 YLQASIIDMYVKCRLLDN-------------------------------ARKLFETSVDR 275
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMH 320
V+W ++ISG+ +EA LF++M R + + T+A IL + SL + K +H
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIE 380
+ + G+ D V ++ +D Y++ CG I+
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYAR-------------------------------CGNIQ 364
Query: 381 DAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA 440
A+ +FD M + +ISW+S++ N EA+D F +M ++ + +F S++SAC+
Sbjct: 365 MARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACS 424
Query: 441 SKSCLELGEQVF---GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEV 496
++ G + F + V E +H +VD + G + + D M +K
Sbjct: 425 HSGNVKEGWKQFESMTRDYGVVPEEEHY--ACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 497 SWNTIL 502
+W +L
Sbjct: 483 AWGALL 488
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMS--SKTLISWNSILVGLAKNA--CPSEAIDIF 417
+ +L +++ Y R++ A F+ + + SWN+IL G +K+ C S+ + ++
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 418 CRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC 477
RM +D F+ I AC LE G + G A+ GL+ D ++ SLV+ Y +
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 478 GFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
G +E +KVFD + + V W ++ GY E LF MR +G+ A+T ++
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 538 SACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQAD 597
AC + + G+ + I+ + ++D+Y + L A L E +
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRN 276
Query: 598 ANMWFSVLRG 607
MW +++ G
Sbjct: 277 VVMWTTLISG 286
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI--KTDEVSWNTILMGYA 506
+QV K I G E + ++ +SL + Y + ++ F+ + K + SWNTIL GY+
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 507 TNGY--GSEALTLFREMR--CSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
+ S+ L L+ MR C GV + F + AC GL+E G L + +
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLENGI-LIHGLAMKNGL 140
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAH 611
+ + +V++YA+ G + A + +E+P + ++ +W +++G + +
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLMKGYLKY 188
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 174/584 (29%), Positives = 272/584 (46%), Gaps = 81/584 (13%)
Query: 98 NMLVSAFAKSGDLQ-----LAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
N +V+ KS D + HS+ + + +NT++ Y+ PR + +KT
Sbjct: 42 NKVVTFLGKSADFASYSSVILHSIRSVL---SSFSYNTLLSSYAVCDKPRVTIFAYKTFV 98
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
+ D V AC + GKQ+H IV + D + +SLV FYG
Sbjct: 99 SNGFSP---DMFTFPPVFKACGKFSGIREGKQIHG--IVTKMGFYDDIYVQNSLVHFYGV 153
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
CG+ R A +VF + V W II+G+
Sbjct: 154 CGE-------------------------------SRNACKVFGEMPVRDVVSWTGIITGF 182
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
G EAL F +M V +++T +L + + + L K +H K +
Sbjct: 183 TRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISL 239
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
+AL+D Y K C ++ DA +F + K
Sbjct: 240 ETGNALIDMYVK-------------------------------CEQLSDAMRVFGELEKK 268
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQV 451
+SWNS++ GL EAID+F M +K D SV+SACAS ++ G V
Sbjct: 269 DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG 511
+T G+++D I T++VD Y KCG++E ++F+G+ + +WN +L G A +G+G
Sbjct: 329 HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHG 388
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK-HNYNINPEIEHYS 570
E+L F EM G +P+ +TF A L+AC HTGLV+EGR F MK YN+ P++EHY
Sbjct: 389 LESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYG 448
Query: 571 CMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN-RTIGKMAAEKIIQLDP 629
CM+DL RAG L EA++L++ MP + D + ++L C G + K + + ++
Sbjct: 449 CMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEF 508
Query: 630 ENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
E+ G Y+ LSN+ A + W+ A++R LM K + K+PG S+ +
Sbjct: 509 EDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 177/437 (40%), Gaps = 74/437 (16%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
+REG+Q+H K G + + N L+ FY G +A ++F EMP + SW +I
Sbjct: 122 IREGKQIHGIVTKMGFYDD-IYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIIT 180
Query: 72 AHLHSGHRNESLRLFHAM---PEKTHY--------------------------------- 95
+G E+L F M P Y
Sbjct: 181 GFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
+ N L+ + K L A +F + K+ + WN++I G ++A+ LF M
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTS- 299
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
+ D +L +VL ACA A++ G+ VH ++ GI ++D + +++V Y KCG
Sbjct: 300 -SGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGI--KWDTHIGTAIVDMYAKCGY 356
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ---------CAVLWN 266
+++A + ++ + F+ +AL+ G A G E+ R F+ V A L
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 267 SIISGYVLNGEEM------EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMH 320
+G V G LF ++ +G D+ A +L +ELVK M
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEA-----LELVKAMP 471
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQG-----PHEACKFFGELKAYDTILLNTMITVYSN 375
V D+ + A+L A K++G P E F +++ D+ + + +++
Sbjct: 472 -------VKPDVRICGAILSA-CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAA 523
Query: 376 CGRIEDAKWIFDTMSSK 392
R +D I M K
Sbjct: 524 NRRWDDVARIRRLMKVK 540
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA-------CPSEAI 414
D +++N ++T G+ D F + SS L S S+L + N C +
Sbjct: 37 DDLIINKVVTF---LGKSAD----FASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRV 89
Query: 415 DIFCRMNMLD--LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
IF + D F+F V AC S + G+Q+ G +G D + SLV
Sbjct: 90 TIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVH 149
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
FY CG KVF M D VSW I+ G+ G EAL F +M V P+ T
Sbjct: 150 FYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLAT 206
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+ VL + G + G+ + + ++ +E + ++D+Y + L +A+ + E+
Sbjct: 207 YVCVLVSSGRVGCLSLGKGIHGLILKRASL-ISLETGNALIDMYVKCEQLSDAMRVFGEL 265
Query: 593 PFQADANMWFSVLRGCIAHGNRT 615
+ D W S++ G + H R+
Sbjct: 266 E-KKDKVSWNSMISG-LVHCERS 286
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 272/582 (46%), Gaps = 76/582 (13%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
Y N L++ + K + A LFD MP +N + W ++ GY G + L LFK+M
Sbjct: 70 YQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFS 129
Query: 155 ----PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEG-IELEFDKVLCSSLVKF 209
P E V V +C++ + GKQ H + G I EF + ++LV
Sbjct: 130 GESRPNEFV------ATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVR---NTLVYM 180
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
Y C A RV + D S+ +SGY G +E V ++ V WN++
Sbjct: 181 YSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLT 239
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
+ +L LF +R + L Q+H+ + G
Sbjct: 240 Y--------LSSLRLFSNLRD----------------------LNLALQVHSRMVRFGFN 269
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
++ EAC +I +Y CG++ A+ +FD
Sbjct: 270 AEV-----------------EAC--------------GALINMYGKCGKVLYAQRVFDDT 298
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGE 449
++ + +I+ ++ EA+++F +M+ ++ ++++FA ++++ A S L+ G+
Sbjct: 299 HAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGD 358
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNG 509
+ G + G ++ +LV+ Y K G +E RK F GM D V+WNT++ G + +G
Sbjct: 359 LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHG 418
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHY 569
G EAL F M +G P+ ITF VL AC H G VE+G + F+ + +++ P+I+HY
Sbjct: 419 LGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY 478
Query: 570 SCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDP 629
+C+V L ++AG +A D + P + D W ++L C N +GK AE I+ P
Sbjct: 479 TCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYP 538
Query: 630 ENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
+ G Y+ LSN+ A S +WEG A+VR LM ++ V+K PG SW
Sbjct: 539 NDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 189/459 (41%), Gaps = 69/459 (15%)
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
L +L CA+ L G+ +HA +IV + ++R
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVT------------------------NQSSRAE-- 67
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
D + +++L++ Y + AR++FD ++ V W +++ GY +G + E L LF
Sbjct: 68 ----DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLF 123
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLL-VVELVKQMHAHACKIGVTHDIVVASALLDAYSK 344
K M G S VA ++ CS +E KQ H K G+ V + L+ YS
Sbjct: 124 KSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSL 183
Query: 345 SQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGL 404
G EA + +L D + ++ ++ Y CG +
Sbjct: 184 CSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFK------------------------ 219
Query: 405 AKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
E +D+ + D + ++ S + ++ L L QV + + G +
Sbjct: 220 -------EGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 465 IISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS 524
+L++ Y KCG V ++VFD + TI+ Y + EAL LF +M
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 525 GVRPSAITFTAVLSACDHTGLVEEGRNLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLG 583
V P+ TF +L++ L+++G L +K Y + + + +V++YA++G +
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVG--NALVNMYAKSGSIE 390
Query: 584 EAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAE 622
+A M F+ D W +++ GC HG +G+ A E
Sbjct: 391 DARKAFSGMTFR-DIVTWNTMISGCSHHG---LGREALE 425
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 125/513 (24%), Positives = 213/513 (41%), Gaps = 67/513 (13%)
Query: 12 LREGRQLHVSFLKTGILNSS--LTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
LR G +H + T + + N L+ Y + A +LFD MP+ N SW +
Sbjct: 47 LRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAM 106
Query: 70 IEAHLHSGHRNESLRLFHAM-----PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKN 124
++ + +SG E L+LF +M + ++ + + SG ++ F K
Sbjct: 107 MKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ-FHGCFLKY 165
Query: 125 GL-----VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFAL 179
GL V NT+++ YS +A+ + LD L +CD V ++ L +C A
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRV-----LDDLP--YCDLSVFSSALSGYLECGAF 218
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVA------GVVKEVDDFS 233
G V + E + ++ + S ++ + DL+ A +V G EV+ +
Sbjct: 219 KEGLDVLRKTANE--DFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE--A 274
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV 293
AL++ Y GK+ A+RVFD Q L +I+ Y + EAL LF +M V
Sbjct: 275 CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 294 SGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACK 353
+ T A +L++ L +++ +H K G + ++V +AL++ Y+KS +A K
Sbjct: 335 PPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARK 394
Query: 354 FFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEA 413
F + D + NTMI+ G + + EA
Sbjct: 395 AFSGMTFRDIVTWNTMIS-------------------------------GCSHHGLGREA 423
Query: 414 IDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG---KAITVGLEFDHIISTSL 470
++ F RM ++ +F V+ AC+ +E G F K V + H T +
Sbjct: 424 LEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY--TCI 481
Query: 471 VDFYCKCG-FVEIGRKVFDGMIKTDEVSWNTIL 502
V K G F + + I+ D V+W T+L
Sbjct: 482 VGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
+ L+ W+ + + K+ ID R+N L + CA+ S L +GE +
Sbjct: 9 QRLLKWDKLASLVPKSKKTPFPID---RLNEL------------LKVCANSSYLRIGESI 53
Query: 452 FGKAITVGLEF---DHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
I D SL++ Y KC RK+FD M + + VSW ++ GY +
Sbjct: 54 HAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNS 113
Query: 509 GYGSEALTLFREMRCSG-VRPSAITFTAVLSACDHTGLVEEGRNL------FDTMKHNYN 561
G+ E L LF+ M SG RP+ T V +C ++G +EEG+ + + H +
Sbjct: 114 GFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFV 173
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
N +V +Y+ GEAI +++++P+ D +++ S L G + G
Sbjct: 174 RN-------TLVYMYSLCSGNGEAIRVLDDLPY-CDLSVFSSALSGYLECG 216
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/450 (32%), Positives = 247/450 (54%), Gaps = 11/450 (2%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
E D + ++L+ YA+ GK+ +VFD + V WN +IS YV NG +A+ +FKR
Sbjct: 78 EFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKR 137
Query: 288 MRRH-GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH---DIVVASALLDAYS 343
M + + D T+ + LSA +L +E+ ++++ + VT + + +AL+D +
Sbjct: 138 MSQESNLKFDEGTIVSTLSACSALKNLEIGERIY----RFVVTEFEMSVRIGNALVDMFC 193
Query: 344 KSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVG 403
K +A F ++ + +M+ Y + GRI++A+ +F+ K ++ W +++ G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253
Query: 404 LAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFD 463
+ EA+++F M ++ D F S+++ CA LE G+ + G + D
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313
Query: 464 HIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRC 523
++ T+LVD Y KCG +E +VF + + D SW +++ G A NG AL L+ EM
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN 373
Query: 524 SGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLG 583
GVR AITF AVL+AC+H G V EGR +F +M +N+ P+ EH SC++DL RAG L
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433
Query: 584 EAIDLIEEMPFQADANM---WFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSN 640
EA +LI++M ++D + + S+L +GN I + AEK+ +++ + A+ L++
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLAS 493
Query: 641 VLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
V A++ WE VR M D ++K PGCS
Sbjct: 494 VYASANRWEDVTNVRRKMKDLGIRKFPGCS 523
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 221/484 (45%), Gaps = 53/484 (10%)
Query: 18 LHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSG 77
+++S L+T SL N++L+ + LF E+ + N + L S
Sbjct: 1 MNMSLLQT----PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSI 56
Query: 78 HR------NESLRLF--HAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
R E + + A E Y N L+ +A G +++ H +FD MP ++ + WN
Sbjct: 57 GRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWN 116
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
+I Y G A+ +FK MS + + D G + + L AC+ L G++++ V
Sbjct: 117 GLISSYVGNGRFEDAIGVFKRMSQES--NLKFDEGTIVSTLSACSALKNLEIGERIYRFV 174
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
+ E E + ++LV + KCG LD A V +++ + +++V GY + G++ E
Sbjct: 175 VTE---FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDE 231
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
AR +F+ + VLW ++++GYV EAL LF+ M+ G+ D + ++L+
Sbjct: 232 ARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQ 291
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
+E K +H + + VT D VV +AL+D Y+K
Sbjct: 292 TGALEQGKWIHGYINENRVTVDKVVGTALVDMYAK------------------------- 326
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
CG IE A +F + + SW S++ GLA N A+D++ M + +++D
Sbjct: 327 ------CGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 430 FSFASVISACASKSCLELGEQVFGKAI---TVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
+F +V++AC + G ++F V + +H + L+D C+ G ++ ++
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH--CSCLIDLLCRAGLLDEAEEL 438
Query: 487 FDGM 490
D M
Sbjct: 439 IDKM 442
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 171/381 (44%), Gaps = 64/381 (16%)
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
+++N ++ + LALF +R G+ D T+ +L + L V +++H +
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
A K G+ D V+++L+ Y+ K F E+ D + N +I+ Y GR EDA
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
+F MS ++ +LK D+ + S +SAC++
Sbjct: 132 IGVFKRMSQES------------------------------NLKFDEGTIVSTLSACSAL 161
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL 502
LE+GE+++ + + E I +LVD +CKCG ++ R VFD M + W +++
Sbjct: 162 KNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 503 MGYAT--------------------------NGYGS-----EALTLFREMRCSGVRPSAI 531
GY + NGY EAL LFR M+ +G+RP
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
++L+ C TG +E+G+ + + N + + + +VD+YA+ GC+ A+++ E
Sbjct: 281 VLVSLLTGCAQTGALEQGKWIHGYINEN-RVTVDKVVGTALVDMYAKCGCIETALEVFYE 339
Query: 592 MPFQADANMWFSVLRGCIAHG 612
+ + D W S++ G +G
Sbjct: 340 IK-ERDTASWTSLIYGLAMNG 359
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 149/371 (40%), Gaps = 103/371 (27%)
Query: 5 LQGIGRTLR--EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
L+ IGR + EG ++H +K G+ S + N L+ Y+ G ++ ++FDEMPQ +
Sbjct: 53 LKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVS-NSLMGMYASLGKIEITHKVFDEMPQRD 111
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSW------------------------- 97
SWN LI +++ +G +++ +F M ++++ +
Sbjct: 112 VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY 171
Query: 98 --------------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRK 143
N LV F K G L A ++FDSM KN W +++ GY G +
Sbjct: 172 RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDE 231
Query: 144 ALSLFKTMSL--------------------DPLEMVHC--------DAGVLATVLGACAD 175
A LF+ + + LE+ C D VL ++L CA
Sbjct: 232 ARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQ 291
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLS 235
AL GK +H + + + DKV+ ++LV Y KCG +++A V +KE D S
Sbjct: 292 TGALEQGKWIHGYINENRVTV--DKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-- 347
Query: 236 ALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
W S+I G +NG AL L+ M GV
Sbjct: 348 -----------------------------WTSLIYGLAMNGMSGRALDLYYEMENVGVRL 378
Query: 296 DVSTVANILSA 306
D T +L+A
Sbjct: 379 DAITFVAVLTA 389
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 114/225 (50%), Gaps = 4/225 (1%)
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
+ + +L+ +N +L LA ++ + +F + L D F+ V+ + + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
E+V G A+ GLEFD +S SL+ Y G +EI KVFD M + D VSWN ++ Y N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 509 GYGSEALTLFREM-RCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE 567
G +A+ +F+ M + S ++ T + LSAC +E G ++ + + ++ I
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 568 HYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ +VD++ + GCL +A + + M + W S++ G ++ G
Sbjct: 186 N--ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTG 227
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 231/446 (51%), Gaps = 31/446 (6%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
E + + ++ ++ + G + +ARR+FD ++ + SIISG+V G +EA LFK
Sbjct: 155 EPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKM 214
Query: 288 MRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQG 347
M + T A +L A L + + KQ+H A K+GV + V+ L+D YSK
Sbjct: 215 MWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSK--- 271
Query: 348 PHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKN 407
CG IEDA+ F+ M KT ++WN+++ G A +
Sbjct: 272 ----------------------------CGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 408 ACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIS 467
EA+ + M + +D+F+ + +I + LEL +Q I G E + + +
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 468 TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVR 527
T+LVDFY K G V+ R VFD + + + +SWN ++ GYA +G G++A+ LF +M + V
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA 423
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAID 587
P+ +TF AVLSAC ++GL E+G +F +M + I P HY+CM++L R G L EAI
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIA 483
Query: 588 LIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSED 647
I P + NMW ++L C N +G++ AEK+ + PE G Y+ + N+ +
Sbjct: 484 FIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGK 543
Query: 648 WEGSAQVRELMIDKNVQKIPGCSWAD 673
+A V E + K + +P C+W +
Sbjct: 544 TAEAAGVLETLESKGLSMMPACTWVE 569
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 216/504 (42%), Gaps = 106/504 (21%)
Query: 91 EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
E Y N ++ K G + A LFD +P +N + +II G+ G+ +A LFK
Sbjct: 155 EPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKM 214
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCS-SLVKF 209
M E+ C+ A +L A A ++ GKQ+H + G+ D S L+
Sbjct: 215 MW---EELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV---VDNTFVSCGLIDM 268
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
Y KCGD++ +AR F+ ++ V WN++I
Sbjct: 269 YSKCGDIE-------------------------------DARCAFECMPEKTTVAWNNVI 297
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
+GY L+G EAL L MR GVS D T++ ++ L +EL KQ HA + G
Sbjct: 298 AGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFE 357
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
+IV +AL+D YSK GR++ A+++FD +
Sbjct: 358 SEIVANTALVDFYSK-------------------------------WGRVDTARYVFDKL 386
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGE 449
K +ISWN+++ G A + ++A+ +F +M ++ + +F +V+SACA E G
Sbjct: 387 PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNG 509
++F V H I + + C +GR DG++
Sbjct: 447 EIFLSMSEV-----HGIKPRAMHYACMIEL--LGR---DGLL------------------ 478
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPE-IEH 568
EA+ R + ++ + + A+L+AC +E GR + + + Y + PE + +
Sbjct: 479 --DEAIAFIRR---APLKTTVNMWAALLNACRMQENLELGRVVAEKL---YGMGPEKLGN 530
Query: 569 YSCMVDLYARAGCLGEAIDLIEEM 592
Y M ++Y G EA ++E +
Sbjct: 531 YVVMYNMYNSMGKTAEAAGVLETL 554
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 178/412 (43%), Gaps = 67/412 (16%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEK--- 92
NR+L + + G + DA +LFDE+P+ N +S+ ++I ++ G+ E+ LF M E+
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 93 --THYSWNML----------------------------------VSAFAKSGDLQLAHSL 116
TH ML + ++K GD++ A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 117 FDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADC 176
F+ MP K + WN +I GY+ G+ +AL L M V D L+ ++
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG---VSIDQFTLSIMIRISTKL 338
Query: 177 FALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSA 236
L KQ HA +I G E E V ++LV FY K G +D+A V + + S +A
Sbjct: 339 AKLELTKQAHASLIRNGFESEI--VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNA 396
Query: 237 LVSGYANAGKMREARRVFD----SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR-H 291
L+ GYAN G+ +A ++F+ + V V + +++S +G + +F M H
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVH 456
Query: 292 GVSGDVSTVANILS-AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ---- 346
G+ A ++ G L+ E + + K V + +ALL+A +
Sbjct: 457 GIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVN----MWAALLNACRMQENLEL 512
Query: 347 GPHEACKFFG----ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
G A K +G +L Y M +Y++ G+ +A + +T+ SK L
Sbjct: 513 GRVVAEKLYGMGPEKLGNY-----VVMYNMYNSMGKTAEAAGVLETLESKGL 559
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 44/207 (21%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
G+G ++ G+QLHV LK G+++++ + L+ YS+ G ++DA F+ MP+ +W
Sbjct: 236 GLG-SIYVGKQLHVCALKLGVVDNTFVSCG-LIDMYSKCGDIEDARCAFECMPEKTTVAW 293
Query: 67 NTLIEAHLHSGHRNESLRLFHAM---------------------------PEKTHYSW-- 97
N +I + G+ E+L L + M ++ H S
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR 353
Query: 98 ----------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
LV ++K G + A +FD +P KN + WN ++ GY+ G A+ L
Sbjct: 354 NGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKL 413
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACA 174
F+ M + H VL ACA
Sbjct: 414 FEKMIAANVAPNHV---TFLAVLSACA 437
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 22/231 (9%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
+Q H S ++ G S + L+ FYS+ G +D A +FD++P+ N SWN L+ + +
Sbjct: 345 KQAHASLIRNG-FESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYAN 403
Query: 76 SGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV---- 127
G ++++LF M H ++ ++SA A SG + +F SM +G+
Sbjct: 404 HGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAM 463
Query: 128 -WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
+ +I + G +A++ + L + A +L AC L G+ V
Sbjct: 464 HYACMIELLGRDGLLDEAIAFIRRAPLKT------TVNMWAALLNACRMQENLELGRVVA 517
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSAL 237
++ G E + V+ ++ GK A AGV++ ++ LS +
Sbjct: 518 EKLYGMGPEKLGNYVVMYNMYNSMGK------TAEAAGVLETLESKGLSMM 562
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNM-LDLKMDKFSFASVISACASKSCL 445
DT SK+ ++ S + L EA ++F + + K+ ++ +++ AC +
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 446 ELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGY 505
++V+G ++ G E + + ++ + KCG + R++FD + + + S+ +I+ G+
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 506 ATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFD-TMKHNYNINP 564
G EA LF+ M TF +L A G + G+ L +K N
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNT 259
Query: 565 EIEHYSC-MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ SC ++D+Y++ G + +A E MP + W +V+ G HG
Sbjct: 260 FV---SCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHG 304
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 233/439 (53%), Gaps = 34/439 (7%)
Query: 264 LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
++N++ G+V + +L L+ RM R VS T ++++ A S + + AH
Sbjct: 838 VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA--SSFASRFGESLQAHI 895
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVY---------- 373
K G + + + L+D YS + EA K F E+ D I TM++ Y
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSAN 955
Query: 374 -------------SNC--------GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
SNC G +E A+ +F+ M K +ISW +++ G ++N E
Sbjct: 956 SLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYRE 1015
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
AI +F +M + D+ + ++VISACA LE+G++V + G D I ++LVD
Sbjct: 1016 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 1075
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y KCG +E VF + K + WN+I+ G A +G+ EAL +F +M V+P+A+T
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
F +V +AC H GLV+EGR ++ +M +Y+I +EHY MV L+++AG + EA++LI M
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Query: 593 PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSA 652
F+ +A +W ++L GC H N I ++A K++ L+P N G Y L ++ A W A
Sbjct: 1196 EFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVA 1255
Query: 653 QVRELMIDKNVQKI-PGCS 670
++R M + ++KI PG S
Sbjct: 1256 EIRGRMRELGIEKICPGTS 1274
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 186/435 (42%), Gaps = 61/435 (14%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLD 154
N ++A L LA S M N V+N + G+ HP ++L L+ M S+
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 155 PLEMVH---CDAGVLATVLGACADCFALNCGKQVHARVIVEGIEL--------------- 196
P + A A+ G G H ++ I+
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD 928
Query: 197 ---EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRV 253
E D + +++V Y + D+DSA +A + E ++ + + L++GY G + +A +
Sbjct: 929 EMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESL 988
Query: 254 FDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVV 313
F+ + + W ++I GY N EA+A+F +M G+ D T++ ++SA L V+
Sbjct: 989 FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 314 ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVY 373
E+ K++H + + G D+ + SAL+D YSK
Sbjct: 1049 EIGKEVHMYTLQNGFVLDVYIGSALVDMYSK----------------------------- 1079
Query: 374 SNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFA 433
CG +E A +F + K L WNSI+ GLA + EA+ +F +M M +K + +F
Sbjct: 1080 --CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFV 1137
Query: 434 SVISACASKSCLELGEQVFGKAI---TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
SV +AC ++ G +++ I ++ +H +V + K G + ++ M
Sbjct: 1138 SVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY--GGMVHLFSKAGLIYEALELIGNM 1195
Query: 491 -IKTDEVSWNTILMG 504
+ + V W +L G
Sbjct: 1196 EFEPNAVIWGALLDG 1210
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSW 97
L+ FYS G + +A ++FDEMP+ + +W T++ A+ + + L + M EK +
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 969
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N L++ + G+L+ A SLF+ MP K+ + W T+I GYS+ R+A+++F M E
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMM---EE 1026
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
+ D ++TV+ ACA L GK+VH + G L D + S+LV Y KCG L+
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVL--DVYIGSALVDMYSKCGSLE 1084
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCAVLWNSIISGYV 273
A V + + + F ++++ G A G +EA ++F V AV + S+ +
Sbjct: 1085 RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACT 1144
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
G E +++ M D S V+N+ G
Sbjct: 1145 HAGLVDEGRRIYRSM-----IDDYSIVSNVEHYG 1173
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 43/230 (18%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPE-- 91
T+N L+ Y G L+ A LF++MP + SW T+I+ + + E++ +F+ M E
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 92 -------------------------KTH------------YSWNMLVSAFAKSGDLQLAH 114
+ H Y + LV ++K G L+ A
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 115 SLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA 174
+F ++P KN WN+II G + G ++AL +F M +E V +A +V AC
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME---MESVKPNAVTFVSVFTACT 1144
Query: 175 DCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAG 224
++ G++++ R +++ + + +V + K G + A + G
Sbjct: 1145 HAGLVDEGRRIY-RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIG 1193
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 289/587 (49%), Gaps = 86/587 (14%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N L++ +AK G++ A +FD+MP +N + W +I GY + G+ ++ LF +M
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM------ 153
Query: 158 MVHC--DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
+ HC + L++VL +C GKQVH + G+ + ++++ YG+C D
Sbjct: 154 LSHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSI--YVANAVISMYGRCHD 207
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
+A EA VF++ + V WNS+I+ +
Sbjct: 208 GAAA----------------------------YEAWTVFEAIKFKNLVTWNSMIAAFQCC 239
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSA---GCSLLVVELVK---QMHAHACKIGVT 329
+A+ +F RM GV D +T+ NI S+ L+ E+ K Q+H+ K G+
Sbjct: 240 NLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLV 299
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
VA+AL+ YS+ M+ Y++C ++ F M
Sbjct: 300 TQTEVATALIKVYSE------------------------MLEDYTDCYKL------FMEM 329
Query: 390 SS-KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
S + +++WN I+ A P AI +F ++ L D ++F+SV+ ACA
Sbjct: 330 SHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHA 388
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
+ + I G D +++ SL+ Y KCG +++ +VFD M D VSWN++L Y+ +
Sbjct: 389 LSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLH 448
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
G L +F++M + P + TF A+LSAC H G VEEG +F +M P++ H
Sbjct: 449 GQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNH 505
Query: 569 YSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQL- 627
Y+C++D+ +RA EA ++I++MP DA +W ++L C HGN +GK+AA+K+ +L
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELV 565
Query: 628 DPENPGAYIQLSNVLATSEDW-EGSAQVRELMIDKNVQKIPGCSWAD 673
+P N +YIQ+SN+ + E + ++E M V+K P SW +
Sbjct: 566 EPTNSMSYIQMSNIYNAEGSFNEANLSIKE-METWRVRKEPDLSWTE 611
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDH--IISTSLVDFYCKCGFVEIGRKVFD 488
++A++ ACA + L G + ++ + I++ L++ Y KCG + R+VFD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 489 GMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
M + + VSW ++ GY G E LF M S P+ T ++VL++C +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRY 173
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
T R +H +K G L ++ N L+ Y++ G LD ++FD+M + SWN+++
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLN-NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 71 EAHLHSGHRNESLRLFHAM---PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV 127
+A+ G + L +F M P+ ++ L+SA + +G ++ +F SM K +
Sbjct: 443 KAYSLHGQVDSILPVFQKMDINPDSA--TFIALLSACSHAGRVEEGLRIFRSMFEKPETL 500
Query: 128 -----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
+ +I S+ +A + K M +DP DA V +LG+C
Sbjct: 501 PQLNHYACVIDMLSRAERFAEAEEVIKQMPMDP------DAVVWIALLGSC 545
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/614 (26%), Positives = 298/614 (48%), Gaps = 56/614 (9%)
Query: 74 LHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIH 133
LH + + +F P+ ++ + L+S + + + A +FD + +N +N ++
Sbjct: 39 LHVLQLHARIVVFSIKPD--NFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLI 96
Query: 134 GYSKRGHPRKALSLFKT------MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA 187
Y+ R A SLF + S D + L C D + + +QVH
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 188 RVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKM 247
VI G + D + + ++ +Y KC +++SA
Sbjct: 157 FVIRGG--FDSDVFVGNGMITYYTKCDNIESA---------------------------- 186
Query: 248 REARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM------RRHGVSGDVSTVA 301
R+VFD ++ V WNS+ISGY +G + ++K M + +GV TV
Sbjct: 187 ---RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV-----TVI 238
Query: 302 NILSA--GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
++ A S L+ L ++H + + D+ + +A++ Y+K A F E+
Sbjct: 239 SVFQACGQSSDLIFGL--EVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
D++ +I+ Y G +++A +F M S L +WN+++ GL +N E I+ F
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
M + + + +S++ + S L+ G+++ AI G + + ++TS++D Y K GF
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+ ++VFD ++W I+ YA +G A +LF +M+C G +P +T TAVLSA
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Query: 540 CDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
H+G + +++FD+M Y+I P +EHY+CMV + +RAG L +A++ I +MP A
Sbjct: 477 FAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK 536
Query: 600 MWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMI 659
+W ++L G G+ I + A +++ +++PEN G Y ++N+ + WE + VR M
Sbjct: 537 VWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
Query: 660 DKNVQKIPGCSWAD 673
++KIPG SW +
Sbjct: 597 RIGLKKIPGTSWIE 610
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 173/459 (37%), Gaps = 135/459 (29%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
RQ+H F+ G +S + N ++ +Y++ ++ A ++FDEM + + SWN++I +
Sbjct: 151 ARQVH-GFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 75 HSGHRNESLRLFHAM-------PE----------------------------KTHYSW-- 97
SG + +++ AM P + H
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 98 ---NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
N ++ +AK G L A +LFD M K+ + + II GY G ++A++LF M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 155 PL------------------------EMVHC----DAGVLATVLGACADCFALNCGKQVH 186
L EM+ C + L+++L + L GK++H
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
A I G + + ++++ YA G
Sbjct: 390 AFAIRNGADNNI---------------------------------YVTTSIIDNYAKLGF 416
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
+ A+RVFD+ D+ + W +II+ Y ++G+ A +LF +M+ G D T+ +LSA
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQG-PHEACKFFGELKAYDTIL 365
AH+ + I ++L Y G H AC
Sbjct: 477 -------------FAHSGDSDMAQHIF--DSMLTKYDIEPGVEHYAC------------- 508
Query: 366 LNTMITVYSNCGRIEDAKWIFDTMSSKTLIS-WNSILVG 403
M++V S G++ DA M + W ++L G
Sbjct: 509 ---MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 268/565 (47%), Gaps = 74/565 (13%)
Query: 110 LQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVH-CDAGVLAT 168
++L H F S P V TI+ + R +L + L P H DA
Sbjct: 5 MRLIHRSFSSSP--TNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDA----- 57
Query: 169 VLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
+L AC D AL G++VHA +I L + L+ FYGKC L+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMI--KTRYLPATYLRTRLLIFYGKCDCLE----------- 104
Query: 229 VDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
+AR+V D ++ V W ++IS Y G EAL +F M
Sbjct: 105 --------------------DARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 289 RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
R + T A +L++ + L KQ+H K I V S+LLD Y+K+
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA--- 201
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
G+I++A+ IF+ + + ++S +I+ G A+
Sbjct: 202 ----------------------------GQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIST 468
EA+++F R++ + + ++AS+++A + + L+ G+Q + L F ++
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 469 SLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG-VR 527
SL+D Y KCG + R++FD M + +SWN +L+GY+ +G G E L LFR MR V+
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFDTM-KHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
P A+T AVLS C H + + G N+FD M Y P EHY C+VD+ RAG + EA
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 587 DLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSE 646
+ I+ MP + A + S+L C H + IG+ ++I+++PEN G Y+ LSN+ A++
Sbjct: 414 EFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAG 473
Query: 647 DWEGSAQVRELMIDKNVQKIPGCSW 671
W VR +M+ K V K PG SW
Sbjct: 474 RWADVNNVRAMMMQKAVTKEPGRSW 498
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 54/343 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R LR+G+++H +KT L ++ RLL FY + CL+DA ++ DEMP+ N SW +
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLR-TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAM 124
Query: 70 IEAHLHSGHRNESLRLFHAM------PEKTHYS------------------------WNM 99
I + +GH +E+L +F M P + ++ WN
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY 184
Query: 100 ---------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
L+ +AK+G ++ A +F+ +P ++ + II GY++ G +AL +F
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
+ + + + L T L A L+ GKQ H V+ EL F VL +SL+ Y
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLA---LLDHGKQAHCHVLRR--ELPFYAVLQNSLIDMY 299
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF-----DSRVDQCAVLW 265
KCG+L A R+ + E S +A++ GY+ G RE +F + RV AV
Sbjct: 300 SKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
+++SG E L +F M V+G+ T GC
Sbjct: 360 LAVLSGCSHGRMEDTGLNIFDGM----VAGEYGTKPGTEHYGC 398
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L G+Q H L+ L N L+ YS+ G L A +LFD MP+ A SWN ++
Sbjct: 270 LDHGKQAHCHVLRRE-LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSG-------DLQLAHSLFDSMPC-- 122
+ G E L LF M ++ + + SG D L ++FD M
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL--NIFDGMVAGE 386
Query: 123 ---KNGLV-WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA 178
K G + I+ + G +A K M P AGVL ++LGAC +
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP------TAGVLGSLLGACRVHLS 440
Query: 179 LNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDS 218
++ G+ V R+I E + V+ S+L G+ D+++
Sbjct: 441 VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNN 480
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 235/424 (55%), Gaps = 4/424 (0%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG--VSGDVSTVANILSAG 307
A ++ D NS+I + + ++ ++R+ G + D TV ++ A
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC-KFFGELKAYDTILL 366
L + E Q+H + G +D V + L+ Y++ G ++C K F + D +
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAE-LGCLDSCHKVFNSIPCPDFVCR 177
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
M+T + CG + A+ +F+ M + I+WN+++ G A+ EA+++F M + +K
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK 237
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
++ + SV+SAC L+ G ++ ++T+LVD Y KCG +E +V
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEV 297
Query: 487 FDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLV 546
F GM + + +W++ L G A NG+G + L LF M+ GV P+A+TF +VL C G V
Sbjct: 298 FWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 547 EEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLR 606
+EG+ FD+M++ + I P++EHY C+VDLYARAG L +A+ +I++MP + A +W S+L
Sbjct: 358 DEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLH 417
Query: 607 GCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKI 666
+ N +G +A++K+++L+ N GAY+ LSN+ A S DW+ + VR+ M K V+K
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 667 PGCS 670
PGCS
Sbjct: 478 PGCS 481
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 36/395 (9%)
Query: 110 LQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATV 169
L A+ + D N++I + K P K+ ++ + L + D + +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRI-LSSGNDLKPDNYTVNFL 114
Query: 170 LGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV 229
+ AC G QVH I G + D + + L+ Y + G LDS +V +
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRG--FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP 172
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D +A+V+ A G + AR++F+ ++ + WN++ISGY GE EAL +F M+
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
GV + + ++LSA L ++ + H++ + + + +A+ L+D Y+K
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAK----- 287
Query: 350 EACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNAC 409
CG +E A +F M K + +W+S L GLA N
Sbjct: 288 --------------------------CGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGF 321
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT-VGLEFDHIIST 468
+ +++F M + + +F SV+ C+ ++ G++ F G+E
Sbjct: 322 GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYG 381
Query: 469 SLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
LVD Y + G +E + M +K W+++L
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 164/395 (41%), Gaps = 100/395 (25%)
Query: 9 GRTLRE-GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWN 67
G +RE G Q+H ++ G N L+ Y+ GCLD ++F+ +P + F
Sbjct: 120 GLRMRETGLQVHGMTIRRGFDNDPHVQTG-LISLYAELGCLDSCHKVFNSIPCPD-FVCR 177
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV 127
T +V+A A+ GD+ A LF+ MP ++ +
Sbjct: 178 T------------------------------AMVTACARCGDVVFARKLFEGMPERDPIA 207
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA 187
WN +I GY++ G R+AL++F M LE V + + +VL AC AL+ G+ H+
Sbjct: 208 WNAMISGYAQVGESREALNVFHLMQ---LEGVKVNGVAMISVLSACTQLGALDQGRWAHS 264
Query: 188 RVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKM 247
+E +++ L ++LV Y KCGD++ A V ++E + ++
Sbjct: 265 --YIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT-------------- 308
Query: 248 REARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
W+S ++G +NG + L LF M++ GV+ + T ++L G
Sbjct: 309 -----------------WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR-G 350
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLN 367
CS VV V + H D+ G + +G
Sbjct: 351 CS--VVGFVDEGQRH----------------FDSMRNEFGIEPQLEHYG----------- 381
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKTLIS-WNSIL 401
++ +Y+ GR+EDA I M K + W+S+L
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 232/431 (53%), Gaps = 41/431 (9%)
Query: 245 GKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANIL 304
G + A +VF V++ VLW S+I+GY+LN + + A F D+S
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF----------DLSP----- 86
Query: 305 SAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTI 364
DIV+ + ++ Y + EA F ++ D +
Sbjct: 87 ------------------------ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVM 122
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM-NML 423
NT++ Y+N G +E + +FD M + + SWN ++ G A+N SE + F RM +
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGL-EFDHIISTSLVDFYCKCGFVEI 482
+ + + V+SACA + G+ V T+G + D + +L+D Y KCG +EI
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEI 242
Query: 483 GRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
+VF G+ + D +SWNT++ G A +G+G+EAL LF EM+ SG+ P +TF VL AC H
Sbjct: 243 AMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKH 302
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
GLVE+G F++M +++I PEIEH C+VDL +RAG L +A++ I +MP +ADA +W
Sbjct: 303 MGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWA 362
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
++L + IG++A E++I+L+P NP ++ LSN+ + ++ +A+++ M D
Sbjct: 363 TLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTG 422
Query: 663 VQKIPGCSWAD 673
+K G SW +
Sbjct: 423 FKKEAGVSWIE 433
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 24/345 (6%)
Query: 51 ATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDL 110
A + FD P+ + WNT+I ++ G+ E+ LF MP + SWN ++ +A GD+
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDM 137
Query: 111 QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
+ +FD MP +N WN +I GY++ G + L FK M +D +V DA + VL
Sbjct: 138 EACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM-VDEGSVVPNDA-TMTLVL 195
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKV---LCSSLVKFYGKCGDLDSAARVAGVVK 227
ACA A + GK VH G L ++KV + ++L+ YGKCG ++ A V +K
Sbjct: 196 SACAKLGAFDFGKWVHKY----GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK 251
Query: 228 EVDDFSLSALVSGYANAGKMREARRVF----DSRVDQCAVLWNSIISGYVLNGEEMEALA 283
D S + +++G A G EA +F +S + V + ++ G + LA
Sbjct: 252 RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLA 311
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVE---LVKQMHAHACKIGVTHDIVVASALLD 340
F M D S + I GC + ++ + Q K+ V D V+ + LL
Sbjct: 312 YFNSMFT-----DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Query: 341 A---YSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
A Y K A + +L+ + + +Y + GR +DA
Sbjct: 367 ASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDA 411
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 161/401 (40%), Gaps = 83/401 (20%)
Query: 108 GDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLA 167
G + A+ +F M KN ++W ++I+GY + +S + L P
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLN---KDLVSARRYFDLSP------------ 86
Query: 168 TVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVK 227
E D VL ++++ Y + G++ A + +
Sbjct: 87 -----------------------------ERDIVLWNTMISGYIEMGNMLEARSLFDQMP 117
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
D S + ++ GYAN G M RVFD ++ WN +I GY NG E L FKR
Sbjct: 118 CRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 288 MRRHG-VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH-DIVVASALLDAYSKS 345
M G V + +T+ +LSA L + K +H + +G D+ V +AL+D Y K
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKC 237
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
A + F +K D LISWN+++ GLA
Sbjct: 238 GAIEIAMEVFKGIKRRD-------------------------------LISWNTMINGLA 266
Query: 406 KNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT---VGLEF 462
+ +EA+++F M + DK +F V+ AC +E G F T + E
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEI 326
Query: 463 DHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+H +VD + GF+ + + M +K D V W T+L
Sbjct: 327 EH--CGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+ +H G + N L+ Y + G ++ A ++F + + + SWNT+I
Sbjct: 207 GKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 75 HSGHRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVW 128
GH E+L LFH M P+K + ++ A G ++ + F+SM ++
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVG--VLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 129 NT-----IIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGK 183
++ S+ G +A+ M V DA + AT+LGA ++ G+
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMP------VKADAVIWATLLGASKVYKKVDIGE 378
Query: 184 QVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
+I + V+ S++ YG G D AAR+ +++
Sbjct: 379 VALEELIKLEPRNPANFVMLSNI---YGDAGRFDDAARLKVAMRD 420
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/577 (29%), Positives = 271/577 (46%), Gaps = 74/577 (12%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
LV+ +AK G ++ A +F ++ +N +I G+ G P A+ ++ M + +
Sbjct: 102 LVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANG---I 157
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D ++L +D L+ K+VH +L FD
Sbjct: 158 LPDKYTFPSLLKG-SDAMELSDVKKVHGL----AFKLGFDS------------------- 193
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC-AVLWNSIISGYVLNGEE 278
D + S LV+ Y+ + +A++VFD D+ +VLWN++++GY
Sbjct: 194 ----------DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASAL 338
+AL +F +MR GV T+ ++LSA ++ + +H A K G DIVV++AL
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 339 LDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWN 398
+D Y KS+ +E+A IF+ M + L +WN
Sbjct: 304 IDMYGKSKW-------------------------------LEEANSIFEAMDERDLFTWN 332
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV 458
S+L + +F RM ++ D + +V+ C + L G ++ G I
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS 392
Query: 459 GL----EFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
GL + I SL+D Y KCG + R VFD M D SWN ++ GY G A
Sbjct: 393 GLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELA 452
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
L +F M +GV+P ITF +L AC H+G + EGRN M+ YNI P +HY+C++D
Sbjct: 453 LDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVID 512
Query: 575 LYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA 634
+ RA L EA +L P + +W S+L C HGN+ + +A +++ +L+PE+ G
Sbjct: 513 MLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGG 572
Query: 635 YIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
Y+ +SNV + +E VR+ M +NV+K PGCSW
Sbjct: 573 YVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSW 609
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 216/492 (43%), Gaps = 80/492 (16%)
Query: 141 PRKAL-SLFKTMS----LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE 195
P AL SL+ T+S +P H + L CA G+Q+H ++ +G
Sbjct: 33 PSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGF- 91
Query: 196 LEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD 255
LD + R ++LV+ YA G MR A VF
Sbjct: 92 --------------------LDDSPRAG-----------TSLVNMYAKCGLMRRAVLVFG 120
Query: 256 SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVEL 315
++ +N++ISG+V+NG ++A+ ++ MR +G+ D T ++L G + +
Sbjct: 121 GS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAMELSD 178
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYD-TILLNTMITVYS 374
VK++H A K+G D V S L+ +YSK +A K F EL D ++L N ++ YS
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 375 NCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFAS 434
R EDA + +F +M + + + + S
Sbjct: 239 QIFRFEDA-------------------------------LLVFSKMREEGVGVSRHTITS 267
Query: 435 VISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTD 494
V+SA ++ G + G A+ G D ++S +L+D Y K ++E +F+ M + D
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327
Query: 495 EVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFD 554
+WN++L + G L LF M CSG+RP +T T VL C + +GR +
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387
Query: 555 TM----KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIA 610
M N + E H S M D+Y + G L +A + + M + D+ W ++ G
Sbjct: 388 YMIVSGLLNRKSSNEFIHNSLM-DMYVKCGDLRDARMVFDSMRVK-DSASWNIMING--- 442
Query: 611 HGNRTIGKMAAE 622
+G ++ G++A +
Sbjct: 443 YGVQSCGELALD 454
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 198/483 (40%), Gaps = 103/483 (21%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H ++ G L+ S L+ Y++ G + A +F + + F +N LI +
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFV 137
Query: 75 HSGHRNESLRLFHAM------PEK--------------------TH------------YS 96
+G +++ + M P+K H Y
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYV 197
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKN-GLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
+ LV++++K ++ A +FD +P ++ ++WN +++GYS+ AL +F M
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE-- 255
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
E V + +VL A ++ G+ +H + G D V+ ++L+ YGK
Sbjct: 256 -EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG--SDIVVSNALIDMYGK--- 309
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
+ + EA +F++ ++ WNS++ +
Sbjct: 310 ----------------------------SKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVA 335
G+ LALF+RM G+ D+ T+ +L L + +++H + ++
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGY----------MIV 391
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
S LL+ S ++ H N+++ +Y CG + DA+ +FD+M K
Sbjct: 392 SGLLNRKSSNEFIH-----------------NSLMDMYVKCGDLRDARMVFDSMRVKDSA 434
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
SWN ++ G +C A+D+F M +K D+ +F ++ AC+ L G +
Sbjct: 435 SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 456 ITV 458
TV
Sbjct: 495 ETV 497
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 284/589 (48%), Gaps = 20/589 (3%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPC---KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
L+S +A+ G L A ++F+++ + +WN+I+ G AL L++ M L
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
D +L +L AC + H +VI G++ V + L+ Y K G +
Sbjct: 155 T---GDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVV--NELLTLYPKAGRM 209
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCAVLWNSIISGY 272
A + + + S + ++ G++ A ++F+ V W S++S +
Sbjct: 210 GDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCH 269
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
G+ + L F MR G + +A S L + + +++H + K G +
Sbjct: 270 SQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYL 329
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS-- 390
+AL+ Y K +A F +++ N++IT + + G++++A +F +
Sbjct: 330 PSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEM 389
Query: 391 ------SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
+++W S++ G ++++ F +M + + + ++S CA
Sbjct: 390 NHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPA 449
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMG 504
L LG ++ G I + + ++ +LV+ Y KCG + G VF+ + D +SWN+I+ G
Sbjct: 450 LNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKG 509
Query: 505 YATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINP 564
Y +G+ +AL++F M SG P I AVLSAC H GLVE+GR +F +M + + P
Sbjct: 510 YGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEP 569
Query: 565 EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKI 624
+ EHY+C+VDL R G L EA ++++ MP + + ++L C H N I + A ++
Sbjct: 570 QQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQL 629
Query: 625 IQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
L+PE G+Y+ LSN+ + WE SA VR L K+++K+ G SW +
Sbjct: 630 SVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIE 678
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 131/571 (22%), Positives = 238/571 (41%), Gaps = 120/571 (21%)
Query: 5 LQGIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ---T 61
L G+ T ++ RQ+H L + + S + A L+ Y+R G L DA +F+ + +
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS 121
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAMPEK----------------------------- 92
+ WN++++A++ G +L L+ M ++
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 93 ----------THYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
+ N L++ + K+G + A++LF MP +N + WN +I G+S+
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 143 KALSLFKTMS---LDPLEMV-------HCDAG----------------------VLATVL 170
A+ +F+ M P E+ H G LA
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKVLCS--SLVKFYGKCGDLDSAARVAGVVKE 228
CA+ AL+ ++VH VI G F++ L S +L+ YGK G + A + ++
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGG----FEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 229 VDDFSLSALVSGYANAGKMREARRVFDS--------RVDQCAVLWNSIISGYVLNGEEME 280
S ++L++ + +AGK+ EA +F V V W S+I G + G +
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
+L F++M+ V + T+ ILS L + L +++H H + ++ +I+V +AL++
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSI 400
Y+K CG + + +F+ + K LISWNSI
Sbjct: 478 MYAK-------------------------------CGLLSEGSLVFEAIRDKDLISWNSI 506
Query: 401 LVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF-GKAITVG 459
+ G + +A+ +F RM D + +V+SAC+ +E G ++F + G
Sbjct: 507 IKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFG 566
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
LE +VD + GF++ ++ M
Sbjct: 567 LEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS---WNSILVGLAKNACPSEAIDIFCRMN 421
L +I+VY+ G + DA+ +F+T+S L WNSIL + A++++ M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
L D + ++ AC L + I +GL+ + + L+ Y K G +
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 482 IGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD 541
+F M + +SWN ++ G++ A+ +F M+ +P +T+T+VLS
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 542 HTGLVEEGRNLFDTMKHNYN 561
G E+ F M+ + N
Sbjct: 271 QCGKFEDVLKYFHLMRMSGN 290
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 122/310 (39%), Gaps = 56/310 (18%)
Query: 13 REGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ--------TNAF 64
++G+ L I N + + N L+ + G LD+A LF E+ + N
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 65 SWNTLIEAHLHSGHRNESLRLFHAM----------------------PE----------- 91
+W ++I+ G ++SL F M P
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 92 -KTHYSWNMLV-----SAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKAL 145
+T S N+LV + +AK G L +F+++ K+ + WN+II GY G KAL
Sbjct: 461 IRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKAL 520
Query: 146 SLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCS 204
S+F M H D L VL AC+ + G+++ + G+E + + C
Sbjct: 521 SMFDRMISSGF---HPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC- 576
Query: 205 SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL 264
+V G+ G L A+ +VK + ++ N+ +M + + + Q +VL
Sbjct: 577 -IVDLLGRVGFLKEASE---IVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVL 632
Query: 265 WNSIISGYVL 274
Y+L
Sbjct: 633 EPERTGSYML 642
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 187/623 (30%), Positives = 297/623 (47%), Gaps = 56/623 (8%)
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHY-----SWNMLVSAFAKSGDLQLAHSL 116
N F++ L+++ G + R+ HA KT + + LVS + K + A +
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQG-RILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 117 FDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADC 176
D MP + N + G + G R A +F + M ++ +A+VLG C D
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM---NSVTVASVLGGCGD- 144
Query: 177 FALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSA 236
+ G Q+H + G E+E + +SLV Y +CG+ AA
Sbjct: 145 --IEGGMQLHCLAMKSGFEMEV--YVGTSLVSMYSRCGEWVLAA---------------- 184
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV--S 294
R+F+ + V +N+ ISG + NG ++F MR+
Sbjct: 185 ---------------RMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEP 229
Query: 295 GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
DV T N ++A SLL ++ +Q+H K + +V +AL+D YSK + A
Sbjct: 230 NDV-TFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 355 FGELK-AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL----ISWNSILVGLAKNAC 409
F ELK + I N++I+ G+ E A +F+ + S+ L +WNS++ G ++
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
EA F RM + + S++SAC+ L+ G+++ G I E D + TS
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 470 LVDFYCKCGFVEIGRKVFDGM--IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVR 527
L+D Y KCG R++FD D V WN ++ GY +G A+ +F +R V
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAID 587
PS TFTAVLSAC H G VE+G +F M+ Y P EH CM+DL R+G L EA +
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE 528
Query: 588 LIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSED 647
+I++M + + S+L C H + +G+ AA K+ +L+PENP ++ LS++ A E
Sbjct: 529 VIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALER 587
Query: 648 WEGSAQVRELMIDKNVQKIPGCS 670
WE +R+++ K + K+PG S
Sbjct: 588 WEDVESIRQVIDQKQLVKLPGLS 610
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 243/453 (53%), Gaps = 4/453 (0%)
Query: 224 GVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALA 283
G+ +E S + S +++G + A + D WN +I G+ + ++++
Sbjct: 35 GLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSIS 94
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
++ +M R G+ D T ++ + L +L +H K G+ D+ + + L+ Y
Sbjct: 95 VYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYG 154
Query: 344 KSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVG 403
+ A K F E+ + + N+++ Y+ G + A+ +FD MS + +++W+S++ G
Sbjct: 155 SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDG 214
Query: 404 LAKNACPSEAIDIFCRM-NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEF 462
K ++A++IF +M M K ++ + SVI ACA L G+ V + V L
Sbjct: 215 YVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPL 274
Query: 463 DHIISTSLVDFYCKCGFVEIGRKVF--DGMIKTDEVSWNTILMGYATNGYGSEALTLFRE 520
I+ TSL+D Y KCG + VF + +TD + WN I+ G A++G+ E+L LF +
Sbjct: 275 TVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHK 334
Query: 521 MRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAG 580
MR S + P ITF +L+AC H GLV+E + F ++K + P+ EHY+CMVD+ +RAG
Sbjct: 335 MRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAG 393
Query: 581 CLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSN 640
+ +A D I EMP + +M ++L GCI HGN + + +K+I+L P N G Y+ L+N
Sbjct: 394 LVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLAN 453
Query: 641 VLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
V A ++ + + +RE M K V+KI G S D
Sbjct: 454 VYAINKQFRAARSMREAMEKKGVKKIAGHSILD 486
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 176/397 (44%), Gaps = 45/397 (11%)
Query: 91 EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
E+ S + SA + SGD+ A+ + WN +I G+S +P K++S++
Sbjct: 39 EEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ 98
Query: 151 M---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
M L P M + ++ + + G +H V+ G LE+D +C++L+
Sbjct: 99 MLRFGLLPDHMTY------PFLMKSSSRLSNRKLGGSLHCSVVKSG--LEWDLFICNTLI 150
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
YG D SA ++ + + + ++++ YA +G + AR VFD ++ V W+S
Sbjct: 151 HMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSS 210
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVS-GDVSTVANILSAGCSLLVVELVKQMHAHACKI 326
+I GYV GE +AL +F +M R G S + T+ +++ A L + K +H + +
Sbjct: 211 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 270
Query: 327 GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF 386
+ +++ ++L+D Y+K CG I DA +F
Sbjct: 271 HLPLTVILQTSLIDMYAK-------------------------------CGSIGDAWSVF 299
Query: 387 DTMSSKTL--ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
S K + WN+I+ GLA + E++ +F +M + D+ +F +++AC+
Sbjct: 300 YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGL 359
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
++ F G E +VD + G V+
Sbjct: 360 VKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVK 396
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 128/239 (53%), Gaps = 18/239 (7%)
Query: 64 FSWNTLIEAHLHSGHRNES--LRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP 121
F NTLI H++ R+++ +LF MP K +WN ++ A+AKSGD+ A +FD M
Sbjct: 144 FICNTLI--HMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS 201
Query: 122 CKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAG--VLATVLGACADCFAL 179
++ + W+++I GY KRG KAL +F M + M A + +V+ ACA AL
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQM----MRMGSSKANEVTMVSVICACAHLGAL 257
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV--AGVVKEVDDFSLSAL 237
N GK VH R I++ + L +L +SL+ Y KCG + A V VKE D +A+
Sbjct: 258 NRGKTVH-RYILD-VHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 238 VSGYANAGKMREARRVF----DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
+ G A+ G +RE+ ++F +S++D + + +++ G EA FK ++ G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESG 374
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 240/484 (49%), Gaps = 16/484 (3%)
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFS--LSALVSGYANAGKMRE----ARRVFD 255
LC +L + ++ R++ K+ F+ L A+ S +A +E A VF
Sbjct: 13 LCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFR 72
Query: 256 SRVDQCAVLWNSIISGYVLN-GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLV-- 312
+ +N+II L+ + + F MRR V D T + A C+
Sbjct: 73 FITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKA-CAAKKNG 131
Query: 313 -VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMIT 371
+ LVK +H A + G+ D+ + L+ YS A + F E D + N +I
Sbjct: 132 DLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLID 191
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
I A+ +FD+M + L+SWNS++ G A+ EAI +F M L LK D +
Sbjct: 192 GLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVA 251
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI 491
S +SACA + G+ + L D ++T LVDFY KCGF++ ++F+
Sbjct: 252 IVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCS 311
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN 551
+WN ++ G A +G G + FR+M SG++P +TF +VL C H+GLV+E RN
Sbjct: 312 DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARN 371
Query: 552 LFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN----MWFSVLRG 607
LFD M+ Y++N E++HY CM DL RAG + EA ++IE+MP W +L G
Sbjct: 372 LFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGG 431
Query: 608 CIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELM-IDKNVQKI 666
C HGN I + AA ++ L PE+ G Y + + A +E WE +VRE++ DK V+K
Sbjct: 432 CRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKN 491
Query: 667 PGCS 670
G S
Sbjct: 492 VGFS 495
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 167/361 (46%), Gaps = 29/361 (8%)
Query: 61 TNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSM 120
++ F+ NTLI + + +L+LF P++ ++N+L+ K+ ++ A LFDSM
Sbjct: 150 SDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSM 209
Query: 121 PCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCF 177
P ++ + WN++I GY++ H R+A+ LF M L P D + + L ACA
Sbjct: 210 PLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP------DNVAIVSTLSACAQSG 263
Query: 178 ALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSAL 237
GK +H + L D L + LV FY KCG +D+A + + + F+ +A+
Sbjct: 264 DWQKGKAIHD--YTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 238 VSGYANAGK----MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR-HG 292
++G A G + R++ S + V + S++ G +G EA LF +MR +
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYD 381
Query: 293 VSGDVS---TVANILS-AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDA---YSKS 345
V+ ++ +A++L AG E+++QM G ++ S LL +
Sbjct: 382 VNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG---GNREKLLAWSGLLGGCRIHGNI 438
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
+ +A L D + M+ +Y+N R E+ + + + + N VG +
Sbjct: 439 EIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKN---VGFS 495
Query: 406 K 406
K
Sbjct: 496 K 496
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 225/422 (53%), Gaps = 10/422 (2%)
Query: 262 AVLWNSIISGYVLN---GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQ 318
+ LWN II V N + ++++ RMR H VS D T +L + + L + L ++
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 319 MHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGR 378
HA G+ D V ++LL+ YS A + F + + D N+++ Y+ G
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 379 IEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD-----LKMDKFSFA 433
I+DA+ +FD M + +ISW+ ++ G EA+D+F M + ++ ++F+ +
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 434 SVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IK 492
+V+SAC LE G+ V +E D ++ T+L+D Y KCG +E ++VF+ + K
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCS-GVRPSAITFTAVLSACDHTGLVEEGRN 551
D +++ ++ A G E LF EM S + P+++TF +L AC H GL+ EG++
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 552 LFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAH 611
F M + I P I+HY CMVDLY R+G + EA I MP + D +W S+L G
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 612 GNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
G+ + A +++I+LDP N GAY+ LSNV A + W +R M K + K+PGCS+
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 672 AD 673
+
Sbjct: 444 VE 445
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 179/397 (45%), Gaps = 60/397 (15%)
Query: 126 LVWNTII----HGYS--KRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFAL 179
+WN II H S +R P + + P D +L + + L
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSP------DFHTFPFLLPSFHNPLHL 78
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVS 239
G++ HA++++ G L+ D + +SL+ Y CGDL SA RV D + +++V+
Sbjct: 79 PLGQRTHAQILLFG--LDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVN 136
Query: 240 GYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG-----VS 294
YA AG + +AR++FD ++ + W+ +I+GYV+ G+ EAL LF+ M+ V
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 295 GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
+ T++ +LSA L +E K +HA+ K V DIV+ +AL+D Y+K
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK---------- 246
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI-SWNSILVGLAKNACPSEA 413
CG +E AK +F+ + SK + ++++++ LA E
Sbjct: 247 ---------------------CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 414 IDIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS--- 469
+F M D + + +F ++ AC + + G+ F I EF S
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE---EFGITPSIQHYG 342
Query: 470 -LVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMG 504
+VD Y + G ++ M ++ D + W ++L G
Sbjct: 343 CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 159/348 (45%), Gaps = 23/348 (6%)
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP 121
+ F +L+ + G + R+F K +WN +V+A+AK+G + A LFD MP
Sbjct: 96 DPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMP 155
Query: 122 CKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL-DPLE-MVHCDAGVLATVLGACADCFAL 179
+N + W+ +I+GY G ++AL LF+ M L P E V + ++TVL AC AL
Sbjct: 156 ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGAL 215
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF-SLSALV 238
GK VHA ++ +E D VL ++L+ Y KCG L+ A RV + D + SA++
Sbjct: 216 EQGKWVHA--YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 239 SGYANAGKMREARRVFDS-----RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV 293
A G E ++F ++ +V + I+ V G E + FK M
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE--- 330
Query: 294 SGDVSTVANILSAGCSLLVV---ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
+ +I GC + + L+K+ + + + D+++ +LL S+ G +
Sbjct: 331 --EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG-SRMLGDIK 387
Query: 351 AC----KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
C K EL ++ + VY+ GR + K I M K +
Sbjct: 388 TCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 229/439 (52%), Gaps = 33/439 (7%)
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV 293
L+ L+ G M AR+VFD LWN++ GYV N E+L L+K+MR GV
Sbjct: 46 LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGV 105
Query: 294 SGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACK 353
D T ++ A L +HAH K G +VA+ L+ Y K
Sbjct: 106 RPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMK--------- 156
Query: 354 FFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEA 413
FGEL + A+++F++M K L++WN+ L + + A
Sbjct: 157 -FGELSS---------------------AEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 414 IDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDF 473
++ F +M ++ D F+ S++SAC LE+GE+++ +A ++ + I+ + +D
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDM 254
Query: 474 YCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITF 533
+ KCG E R +F+ M + + VSW+T+++GYA NG EALTLF M+ G+RP+ +TF
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTF 314
Query: 534 TAVLSACDHTGLVEEGRNLFDTM--KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
VLSAC H GLV EG+ F M ++ N+ P EHY+CMVDL R+G L EA + I++
Sbjct: 315 LGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKK 374
Query: 592 MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGS 651
MP + D +W ++L C H + +G+ A+ +++ P+ ++ LSN+ A + W+
Sbjct: 375 MPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCV 434
Query: 652 AQVRELMIDKNVQKIPGCS 670
+VR M +K+ S
Sbjct: 435 DKVRSKMRKLGTKKVAAYS 453
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 144/338 (42%), Gaps = 81/338 (23%)
Query: 13 REGRQLHVSFLKTGI--LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
++ +++H L+TG NS LT +LL+ G + A Q+FDEM + F WNTL
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLT---QLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 71 EAHLHSGHRNESLRLFHAM------PEKTHYSW--------------------------- 97
+ ++ + ESL L+ M P++ Y +
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 98 ------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
LV + K G+L A LF+SM K+ + WN + + G+ AL F M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
D ++ D+ + ++L AC +L G++++ R E E++ + ++ ++ + +
Sbjct: 202 CADAVQF---DSFTVVSMLSACGQLGSLEIGEEIYDRARKE--EIDCNIIVENARLDMHL 256
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
KCG+ ++A + +K+ + S S ++ GYA
Sbjct: 257 KCGNTEAARVLFEEMKQRNVVSWSTMIVGYA----------------------------- 287
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
+NG+ EAL LF M+ G+ + T +LSA CS
Sbjct: 288 --MNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA-CS 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 440 ASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWN 499
AS S + +++ + G + + T L++ G + R+VFD M K WN
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 500 TILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF-DTMKH 558
T+ GY N E+L L+++MR GVRP T+ V+ A G G L +K+
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 559 NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIG- 617
+ + + +V +Y + G L A L E M + D W + L C+ GN I
Sbjct: 139 GFGCLGIVA--TELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIAL 195
Query: 618 ----KMAAEKIIQLD 628
KM A+ +Q D
Sbjct: 196 EYFNKMCADA-VQFD 209
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 44/245 (17%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G LH +K G + A L+ Y + G L A LF+ M + +WN + +
Sbjct: 128 GFALHAHVVKYGFGCLGIV-ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCV 186
Query: 75 HSGHRNESLRLFHAM----------------------------------PEKTHYSWNML 100
+G+ +L F+ M K N++
Sbjct: 187 QTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII 246
Query: 101 VS-----AFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
V K G+ + A LF+ M +N + W+T+I GY+ G R+AL+LF TM +
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE-LEFDKVLCSSLVKFYGKCG 214
L + VL AC+ +N GK+ + ++ + LE K + +V G+ G
Sbjct: 307 LRPNYV---TFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 215 DLDSA 219
L+ A
Sbjct: 364 LLEEA 368
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 231/454 (50%), Gaps = 33/454 (7%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTVANILSAGC 308
ARR+ + A ++N+++ GY + E ++A+F M R G V D + A ++ A
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL---------- 358
+ + QMH A K G+ + V + L+ Y A K F E+
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 359 ---------------KAYDTILL------NTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
+ +D +L+ N M+ Y G +E AK IF M + +SW
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
++++VG+A N +E+ F + + ++ S V+SAC+ E G+ + G
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI-KTDEVSWNTILMGYATNGYGSEALT 516
G + ++ +L+D Y +CG V + R VF+GM K VSW +++ G A +G G EA+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 517 LFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLY 576
LF EM GV P I+F ++L AC H GL+EEG + F MK Y+I PEIEHY CMVDLY
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417
Query: 577 ARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYI 636
R+G L +A D I +MP A +W ++L C +HGN + + +++ +LDP N G +
Sbjct: 418 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 477
Query: 637 QLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
LSN AT+ W+ A +R+ MI + ++K S
Sbjct: 478 LLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWS 511
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 176/382 (46%), Gaps = 46/382 (12%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R+LR G Q+H LK G L S L L+ Y GC++ A ++FDEM Q N +WN +
Sbjct: 120 RSLRTGFQMHCQALKHG-LESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
I A + +F M + H SWN++++ + K+G+L+ A +F MP ++ + W+
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWS 238
Query: 130 TIIHGYSKRGHPRKALSLFKTMS---LDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
T+I G + G ++ F+ + + P E+ L VL AC+ + GK +H
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEV------SLTGVLSACSQSGSFEFGKILH 292
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
VE + + ++L+ Y +CG++
Sbjct: 293 G--FVEKAGYSWIVSVNNALIDMYSRCGNVPM---------------------------- 322
Query: 247 MREARRVFDS-RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
AR VF+ + +C V W S+I+G ++G+ EA+ LF M +GV+ D + ++L
Sbjct: 323 ---ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 306 AGCSLLVVELVKQMHAHACKI-GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT- 363
A ++E + + ++ + +I ++D Y +S +A F ++ T
Sbjct: 380 ACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTA 439
Query: 364 ILLNTMITVYSNCGRIEDAKWI 385
I+ T++ S+ G IE A+ +
Sbjct: 440 IVWRTLLGACSSHGNIELAEQV 461
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 193/450 (42%), Gaps = 79/450 (17%)
Query: 99 MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEM 158
+L A + S L A L P + ++NT++ GYS+ P ++++F M
Sbjct: 44 ILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGF-- 101
Query: 159 VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDS 218
V D+ A V+ A + +L G Q+H + + G+E + ++L+ YG CG ++
Sbjct: 102 VFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHL--FVGTTLIGMYGGCGCVEF 159
Query: 219 AARV-------------------------AGVVKEVDDF------SLSALVSGYANAGKM 247
A +V AG + D S + +++GY AG++
Sbjct: 160 ARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGEL 219
Query: 248 REARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
A+R+F + V W+++I G NG E+ F+ ++R G+S + ++ +LSA
Sbjct: 220 ESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLN 367
E K +H K G + + V +AL+D YS+
Sbjct: 280 SQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR----------------------- 316
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKT-LISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
CG + A+ +F+ M K ++SW S++ GLA + EA+ +F M +
Sbjct: 317 --------CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 368
Query: 427 MDKFSFASVISACASKSCLELGEQVFG---KAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
D SF S++ AC+ +E GE F + + E +H +VD Y + G ++
Sbjct: 369 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY--GCMVDLYGRSGKLQ-- 424
Query: 484 RKVFDGM----IKTDEVSWNTILMGYATNG 509
K +D + I + W T+L +++G
Sbjct: 425 -KAYDFICQMPIPPTAIVWRTLLGACSSHG 453
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 235/445 (52%), Gaps = 37/445 (8%)
Query: 234 LSALVSGYANAGKMREAR-RVFDSRV-DQ--CAVLWNSIISGYVLNGEEMEALALFKRMR 289
L+ L+S + ++R +F SR+ DQ A LWN+I+ Y+ + ++A+ ++ M
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
R V D ++ ++ A + L K++H+ A ++G D
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGD------------------ 151
Query: 350 EACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNAC 409
E C+ + IT+Y G E+A+ +FD + L SWN+I+ GL
Sbjct: 152 EFCE-------------SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLE--FDHIIS 467
+EA+++F M L+ D F+ SV ++C L L Q+ + E D ++
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 468 TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVR 527
SL+D Y KCG +++ +F+ M + + VSW+++++GYA NG EAL FR+MR GVR
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAID 587
P+ ITF VLSAC H GLVEEG+ F MK + + P + HY C+VDL +R G L EA
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 588 LIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSED 647
++EEMP + + +W ++ GC G+ + + A +++L+P N G Y+ L+NV A
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGM 438
Query: 648 WEGSAQVRELMIDKNVQKIPGCSWA 672
W+ +VR+LM K V KIP S+A
Sbjct: 439 WKDVERVRKLMKTKKVAKIPAYSYA 463
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 46/305 (15%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
++ + K+G+ + A +FD P + WN II G + G +A+ +F M LE
Sbjct: 158 FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE-- 215
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D + +V +C L+ Q+H V+ E + D ++ +SL+ YGKC
Sbjct: 216 -PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC------ 268
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
G+M A +F+ + V W+S+I GY NG +
Sbjct: 269 -------------------------GRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTL 303
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA-----HACKIGVTHDIVV 334
EAL F++MR GV + T +LSA +VE K A + G++H
Sbjct: 304 EALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSH---- 359
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILL-NTMITVYSNCGRIEDAKWIFDTMSSKT 393
++D S+ EA K E+ +++ ++ G +E A+W+ M
Sbjct: 360 YGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVE-- 417
Query: 394 LISWN 398
L WN
Sbjct: 418 LEPWN 422
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 48/250 (19%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G++LH ++ G + + + Y + G ++A ++FDE P+ SWN +I
Sbjct: 136 GKELHSVAVRLGFVGDEFCESG-FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 75 HSGHRNESLRLFHAMPE------------------------------------KTHYS-- 96
H+G NE++ +F M KT
Sbjct: 195 HAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSD 254
Query: 97 ---WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
N L+ + K G + LA +F+ M +N + W+++I GY+ G+ +AL F+ M
Sbjct: 255 IMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR- 313
Query: 154 DPLEM-VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
E V + VL AC + GK A + E ELE +V +
Sbjct: 314 ---EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE-FELEPGLSHYGCIVDLLSR 369
Query: 213 CGDLDSAARV 222
G L A +V
Sbjct: 370 DGQLKEAKKV 379
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 231/433 (53%), Gaps = 40/433 (9%)
Query: 235 SALVSGYANAGKMREARRVFD--SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
S LV YA+ G A VFD S+ D WNS+ISGY G+ +A+AL+ +M G
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
V D T +L A + V++ + +H K G
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG------------------------- 225
Query: 353 KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
FG YD +LN ++ +Y+ CG I A+ +FD + K +SWNS+L G + E
Sbjct: 226 --FG----YDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHE 279
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
A+DIF M ++ DK + +SV++ S + G Q+ G I G+E++ ++ +L+
Sbjct: 280 ALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGMEWELSVANALIV 336
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y K G + +FD M++ D VSWN I+ ++ N S L F +M + +P IT
Sbjct: 337 LYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGIT 393
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLI-EE 591
F +VLS C +TG+VE+G LF M Y I+P++EHY+CMV+LY RAG + EA +I +E
Sbjct: 394 FVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQE 453
Query: 592 MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGS 651
M +A +W ++L C HGN IG++AA+++ +L+P+N + L + + ++ E
Sbjct: 454 MGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDV 513
Query: 652 AQVRELMIDKNVQ 664
+VR++M+D+ ++
Sbjct: 514 ERVRQMMVDRGLE 526
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 173/387 (44%), Gaps = 80/387 (20%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNG--LVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
LV +A G ++AH +FD M ++ WN++I GY++ G A++L+ M+ D
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG-- 190
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
V D VL AC ++ G+ +H ++ EG +D + ++LV Y KCGD+
Sbjct: 191 -VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG--FGYDVYVLNALVVMYAKCGDIV 247
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
A V ++ D S +++++GY + G +
Sbjct: 248 KARNVFDMIPHKDYVSWNSMLTGYLHHGLLH----------------------------- 278
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASA 337
EAL +F+ M ++G+ D ++++L+ +L + +Q+H + G+ ++ VA+A
Sbjct: 279 --EALDIFRLMVQNGIEPDKVAISSVLA---RVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
L+ YSK +AC F ++ DT +SW
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDT-------------------------------VSW 362
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF---GK 454
N+I+ +KN S + F +M+ + K D +F SV+S CA+ +E GE++F K
Sbjct: 363 NAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVE 481
+ + +H +V+ Y + G +E
Sbjct: 420 EYGIDPKMEHY--ACMVNLYGRAGMME 444
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 191/440 (43%), Gaps = 75/440 (17%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ--TNAFSWN 67
R + G ++H + +L ++L +++L++ Y+ G + A ++FD M + ++ F+WN
Sbjct: 106 RAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWN 164
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEK---------------------------TH------ 94
+LI + G +++ L+ M E H
Sbjct: 165 SLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
Query: 95 ------YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
Y N LV +AK GD+ A ++FD +P K+ + WN+++ GY G +AL +F
Sbjct: 225 GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF 284
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+ M + +E D +++VL A + G+Q+H VI G+E E + ++L+
Sbjct: 285 RLMVQNGIE---PDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELS--VANALIV 336
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYA-NAGKMREARRVFDSRVDQCAVLWNS 267
Y K G L A + + E D S +A++S ++ N+ ++ ++ + + + S
Sbjct: 337 LYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVS 396
Query: 268 IIS-----GYVLNGEEMEAL-----ALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVK 317
++S G V +GE + +L + +M + ++ A ++ S++V E+
Sbjct: 397 VLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEM-- 454
Query: 318 QMHAHACKIGVTHDIVVASALLDA---YSKSQGPHEACKFFGELKAYDTILLNTMITVYS 374
G+ V ALL A + + A + EL+ + +I +YS
Sbjct: 455 ---------GLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYS 505
Query: 375 NCGRIEDAKWIFDTMSSKTL 394
R ED + + M + L
Sbjct: 506 KAKRAEDVERVRQMMVDRGL 525
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 6/184 (3%)
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI 491
FAS++ C S ++ G +V L + IS+ LV Y CG+ E+ +VFD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 492 KTD--EVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
K D +WN+++ GYA G +A+ L+ +M GV+P TF VL AC G V+ G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 550 RNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGC 608
+ D +K + + + + +V +YA+ G + +A ++ + +P + D W S+L G
Sbjct: 215 EAIHRDLVKEGFGYDVYV--LNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLTGY 271
Query: 609 IAHG 612
+ HG
Sbjct: 272 LHHG 275
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 188/715 (26%), Positives = 332/715 (46%), Gaps = 124/715 (17%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCL--------DDATQLFDEMPQT 61
+ L+ G+ +H ++ + NSS N L+ Y CL D ++FD M +
Sbjct: 121 KNLKAGKAVHCHLIRC-LQNSSRVVHNSLMNMYV--SCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAM----------------P--------EKTHYSW 97
N +WNTLI ++ +G E+ R F M P +K + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 98 NML-----------------VSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGH 140
++ +S +A+ GD++ + +FDS +N VWNT+I Y +
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 141 PRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK 200
+++ LF ++ E+V + L A + + G+Q H V EL
Sbjct: 298 LVESIELF-LEAIGSKEIVSDEVTYLLAA-SAVSALQQVELGRQFHGFVSKNFRELPI-- 353
Query: 201 VLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ 260
V+ +SL+ Y +CG + + V ++E D
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERD------------------------------ 383
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMH 320
V WN++IS +V NG + E L L M++ G D TV +LSA +L E+ KQ H
Sbjct: 384 -VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIE 380
A + G+ + + S L+D YSKS G I
Sbjct: 443 AFLIRQGIQFE-GMNSYLIDMYSKS-------------------------------GLIR 470
Query: 381 DAKWIFDT--MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISA 438
++ +F+ + + +WNS++ G +N + +F +M +++ + + AS++ A
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 439 CASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSW 498
C+ ++LG+Q+ G +I L+ + ++++LVD Y K G ++ +F + + V++
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 499 NTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
T+++GY +G G A++LF M+ SG++P AITF AVLSAC ++GL++EG +F+ M+
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 559 NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQAD-ANMWFSVLRGCIAHGNRTIG 617
YNI P EHY C+ D+ R G + EA + ++ + + + A +W S+L C HG +
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Query: 618 KMAAEKIIQLDP-ENPGAY-IQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+ +E++ + D +N Y + LSN+ A + W+ +VR M +K ++K G S
Sbjct: 711 ETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRS 765
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 224/518 (43%), Gaps = 67/518 (12%)
Query: 101 VSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVH 160
+S + G+ QLA LFD++P ++WNTII G+ P +AL + M +
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK-KTAPFTN 104
Query: 161 CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
CDA ++ L ACA+ L GK VH +I +V+ +SL+ Y C
Sbjct: 105 CDAYTYSSTLKACAETKNLKAGKAVHCHLI--RCLQNSSRVVHNSLMNMYVSC------- 155
Query: 221 RVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEME 280
+ D F + R+VFD+ + V WN++IS YV G E
Sbjct: 156 -----LNAPDCFEYDVV-------------RKVFDNMRRKNVVAWNTLISWYVKTGRNAE 197
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
A F M R V + N+ A ++ + K+G D
Sbjct: 198 ACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG------------D 245
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSI 400
Y K D ++++ I++Y+ G IE ++ +FD+ + + WN++
Sbjct: 246 EYVK-----------------DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 401 LVGLAKNACPSEAIDIFCR-MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
+ +N C E+I++F + ++ D+ ++ SA ++ +ELG Q G
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
E +I SL+ Y +CG V VF M + D VSWNT++ + NG E L L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHY---SCMVDLY 576
EM+ G + IT TA+LSA + E G+ H + I I+ S ++D+Y
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQ-----THAFLIRQGIQFEGMNSYLIDMY 463
Query: 577 ARAGCLGEAIDLIEEMPF-QADANMWFSVLRGCIAHGN 613
+++G + + L E + + D W S++ G +G+
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 170/385 (44%), Gaps = 32/385 (8%)
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
S+ + +S G + AR++FD+ VLWN+II G++ N EAL + RM++
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 293 --VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
+ D T ++ L A ++ K +H H + VV ++L++ Y
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV------- 153
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
+C L A D C + + +FD M K +++WN+++ K
Sbjct: 154 SC-----LNAPD-------------CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRN 195
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEF--DHIIST 468
+EA F M +++K SF +V A + ++ +G + +G E+ D + +
Sbjct: 196 AEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVS 255
Query: 469 SLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG-VR 527
S + Y + G +E R+VFD ++ + WNT++ Y N E++ LF E S +
Sbjct: 256 SAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIV 315
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAID 587
+T+ SA VE GR + N+ P + S MV +Y+R G + ++
Sbjct: 316 SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFG 374
Query: 588 LIEEMPFQADANMWFSVLRGCIAHG 612
+ M + D W +++ + +G
Sbjct: 375 VFLSMR-ERDVVSWNTMISAFVQNG 398
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 182/707 (25%), Positives = 311/707 (43%), Gaps = 166/707 (23%)
Query: 35 ANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH 94
+N LL S+ G +D+A Q+FD+MP+ + F+WNT+I A+ +S +++ +LF + P K
Sbjct: 31 SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNT 90
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
SWN L+S + KSG A +LF M ++ +
Sbjct: 91 ISWNALISGYCKSGSKVEAFNLFWEM----------------------------QSDGIK 122
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
P E L +VL C L G+Q+H I G +L+ + V
Sbjct: 123 PNEY------TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVV------------- 163
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS-RVDQCAVLWNSIISGYV 273
+ L++ YA ++ EA +F++ ++ V W S+++GY
Sbjct: 164 --------------------NGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
NG +A+ F+ +RR G + T ++L+A S+ + Q+H K G +I
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
V SAL+D Y+K C +E A+ + + M
Sbjct: 264 VQSALIDMYAK-------------------------------CREMESARALLEGMEVDD 292
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA-SKSCLELGEQVF 452
++SWNS++VG + EA+ +F RM+ D+K+D F+ S+++ A S++ +++
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAH 352
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGS 512
+ G +++ +LVD Y K G ++ KVF+GMI+ D +SW ++ G NG
Sbjct: 353 CLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYD 412
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF-DTMKHNYNINPEIEH--- 568
EAL LF MR G+ P I +VLSA L+E G+ + + +K + + + +
Sbjct: 413 EALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLV 472
Query: 569 --------------------------YSCMVDLYARAGCLGEA----------------- 585
++C++ YA+ G L +A
Sbjct: 473 TMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGP 532
Query: 586 ------IDL-------------IEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQ 626
IDL + +M + DA +W ++L HGN G+ AA+ +++
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLME 592
Query: 627 LDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
L+P N Y+QLSN+ + + + +A VR LM +N+ K PGCSW +
Sbjct: 593 LEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVE 639
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 216/538 (40%), Gaps = 134/538 (24%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLF------- 86
T N ++ YS L DA +LF P N SWN LI + SG + E+ LF
Sbjct: 61 TWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDG 120
Query: 87 ---------------------------HAMPEKTHYSW-----NMLVSAFAKSGDLQLAH 114
H KT + N L++ +A+ + A
Sbjct: 121 IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180
Query: 115 SLFDSMPC-KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
LF++M KN + W +++ GYS+ G KA+ F+ + E + +VL AC
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRR---EGNQSNQYTFPSVLTAC 237
Query: 174 ADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA-------------- 219
A A G QVH ++ G + + S+L+ Y KC +++SA
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNI--YVQSALIDMYAKCREMESARALLEGMEVDDVVS 295
Query: 220 --ARVAGVVKE-------------------VDDFSL------------------------ 234
+ + G V++ +DDF++
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 235 ------------SALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEAL 282
+ALV YA G M A +VF+ +++ + W ++++G NG EAL
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 283 ALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAY 342
LF MR G++ D A++LSA L ++E +Q+H + K G + V ++L+ Y
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475
Query: 343 SKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILV 402
+K +A F ++ D I +I Y+ G +EDA+ FD+M + I
Sbjct: 476 TKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVY-----GITP 530
Query: 403 GLAKNACPSEAIDIFCR----------MNMLDLKMDKFSFASVISACASKSCLELGEQ 450
G AC ID+F R ++ ++++ D + ++++A +E GE+
Sbjct: 531 GPEHYAC---MIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGER 585
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 233/441 (52%), Gaps = 17/441 (3%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALAL---FKRMRRHGVSGDVSTVANILSA 306
A ++F+ + WN+II G+ + E+ +A+ ++ M V + T ++L A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEA-CKFFGELKAYDTIL 365
++ KQ+H A K G D V S L+ Y +A F+ + D ++
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 366 L-------------NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
+ N MI Y G + A+ +FD M ++++SWN+++ G + N +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
A+++F M D++ + + SV+ A + LELGE + A G+ D ++ ++L+D
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y KCG +E VF+ + + + ++W+ ++ G+A +G +A+ F +MR +GVRPS +
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+ +L+AC H GLVEEGR F M + P IEHY CMVDL R+G L EA + I M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 593 PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSA 652
P + D +W ++L C GN +GK A ++ + P + GAY+ LSN+ A+ +W +
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 653 QVRELMIDKNVQKIPGCSWAD 673
++R M +K+++K PGCS D
Sbjct: 498 EMRLRMKEKDIRKDPGCSLID 518
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 199/416 (47%), Gaps = 61/416 (14%)
Query: 109 DLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRK--ALSLFKTMSLDPLEMVHCDAGVL 166
DL AH +F+ MP +N WNTII G+S+ + A++LF M D E V +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD--EFVEPNRFTF 131
Query: 167 ATVLGACADCFALNCGKQVHARVIVEGIELEF----DKVLCSSLVKFYGKCGDL-DSAAR 221
+VL ACA + GKQ+H G+ L++ D+ + S+LV+ Y CG + D+
Sbjct: 132 PSVLKACAKTGKIQEGKQIH------GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVL 185
Query: 222 VAGVVKEVDDFSLS-------------ALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
+ E D ++ ++ GY G + AR +FD + V WN++
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
ISGY LNG +A+ +F+ M++ + + T+ ++L A L +EL + +H +A G+
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDT 388
D V+ SAL+D YSK CG IE A +F+
Sbjct: 306 RIDDVLGSALIDMYSK-------------------------------CGIIEKAIHVFER 334
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
+ + +I+W++++ G A + +AID FC+M ++ ++ ++++AC+ +E G
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 449 EQVFGKAITV-GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+ F + ++V GLE +VD + G ++ + M IK D+V W +L
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 63/302 (20%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
++EG+Q+H LK G +N L++ Y G + DA LF + +IE
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSN-LVRMYVMCGFMKDARVLF----------YKNIIE 192
Query: 72 AHL----HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV 127
+ R+ + L WN+++ + + GD + A LFD M ++ +
Sbjct: 193 KDMVVMTDRRKRDGEIVL-----------WNVMIDGYMRLGDCKAARMLFDKMRQRSVVS 241
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA 187
WNT+I GYS G + A+ +F+ M + + L +VL A + +L G+ +H
Sbjct: 242 WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV---TLVSVLPAISRLGSLELGEWLHL 298
Query: 188 RVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKM 247
GI + D VL S+L+ Y KCG ++ A V
Sbjct: 299 YAEDSGIRI--DDVLGSALIDMYSKCGIIEKAIHV------------------------- 331
Query: 248 REARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
F+ + + W+++I+G+ ++G+ +A+ F +MR+ GV N+L+A
Sbjct: 332 ------FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA- 384
Query: 308 CS 309
CS
Sbjct: 385 CS 386
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 223/431 (51%), Gaps = 2/431 (0%)
Query: 242 ANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM--RRHGVSGDVST 299
A+ M A VF + +WN+II G+ + A+++F M V T
Sbjct: 69 ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 128
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
++ A L +Q+H K G+ D + + +L Y EA + F +
Sbjct: 129 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 188
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
+D + N+MI ++ CG I+ A+ +FD M + +SWNS++ G +N +A+D+F
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 248
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
M D+K D F+ S+++ACA E G + + E + I+ T+L+D YCKCG
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+E G VF+ K WN++++G A NG+ A+ LF E+ SG+ P +++F VL+A
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 540 CDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
C H+G V F MK Y I P I+HY+ MV++ AG L EA LI+ MP + D
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 600 MWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMI 659
+W S+L C GN + K AA+ + +LDP+ Y+ LSN A+ +E + + R LM
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 488
Query: 660 DKNVQKIPGCS 670
++ ++K GCS
Sbjct: 489 ERQMEKEVGCS 499
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 205/460 (44%), Gaps = 56/460 (12%)
Query: 58 MPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNML----VSAF--AKSGDLQ 111
MP + + S NT + L+ HA KT + + V AF A D+
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75
Query: 112 LAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM-----SLDPLEMVHCDAGVL 166
A+ +F + KN VWNTII G+S+ P A+S+F M S+ P + +
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 167 ATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV 226
LG D G+Q+H VI EG LE D + ++++ Y CG L A R+ +
Sbjct: 136 YGRLGQARD------GRQLHGMVIKEG--LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 227 KEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFK 286
D + ++++ G+A G + +A+ +FD + V WNS+ISG+V NG +AL +F+
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 287 RMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
M+ V D T+ ++L+A L E + +H + + + +V +AL+D Y K
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK-- 305
Query: 347 GPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAK 406
CG IE+ +F+ K L WNS+++GLA
Sbjct: 306 -----------------------------CGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 407 NACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF---GKAITVGLEFD 463
N A+D+F + L+ D SF V++ACA + ++ F + +
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 464 HIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
H T +V+ G +E + M ++ D V W+++L
Sbjct: 397 HY--TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 119/294 (40%), Gaps = 68/294 (23%)
Query: 13 REGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEA 72
R+GRQLH +K G+ + S N +L Y GCL +A ++F M + +WN++I
Sbjct: 143 RDGRQLHGMVIKEGLEDDSFIR-NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 73 HLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTII 132
G +++ LF MP++ SWN ++S F ++G + A +F M K+
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD-------- 253
Query: 133 HGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE 192
V D + ++L ACA A G+ +H ++
Sbjct: 254 --------------------------VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRN 287
Query: 193 GIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARR 252
EL + ++ ++L+ Y KCG ++ E
Sbjct: 288 RFEL--NSIVVTALIDMYCKCGCIE-------------------------------EGLN 314
Query: 253 VFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
VF+ + WNS+I G NG E A+ LF + R G+ D + +L+A
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 283/573 (49%), Gaps = 42/573 (7%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
LV+ ++ L A ++ ++ + L WN +I Y + ++++S++K M + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS---KGI 180
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D +V+ ACA G+ VH + V +C++L+ Y + G +D A
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL--YVCNALISMYKRFGKVDVA 238
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCAVLWNSIISGYVLN 275
R+ + E D S +A+++ Y + K+ EA ++ D S V+ V WN+I G +
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTHDIVV 334
G + AL MR V + N L A CS H A K G V H +V+
Sbjct: 299 GNYIGALNCVVGMRNCNVRIGSVAMINGLKA-CS----------HIGALKWGKVFHCLVI 347
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
S C F ++ + N++IT+YS C + A +F + + +L
Sbjct: 348 RS---------------CSFSHDIDN----VRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
+WNSI+ G A N E + M + + + AS++ A L+ G++
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 455 AITVGLEFD-HIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
+ D I+ SLVD Y K G + ++VFD M K D+V++ +++ GY G G
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV 573
AL F++M SG++P +T AVLSAC H+ LV EG LF M+H + I +EHYSCMV
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 574 DLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEK-IIQLDPENP 632
DLY RAG L +A D+ +P++ + M ++L+ C+ HGN IG+ AA+K +++ PE+
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQK 665
G Y+ L+++ A + W V+ L+ D VQK
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 186/439 (42%), Gaps = 53/439 (12%)
Query: 167 ATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV 226
A++L C G+Q+HA I G LEFD VL LV FY LD
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSG--LEFDSVLVPKLVTFYSAFNLLD--------- 135
Query: 227 KEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFK 286
EA+ + ++ + WN +I Y+ N E+++++K
Sbjct: 136 ----------------------EAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYK 173
Query: 287 RMRRHGVSGDVSTVANILSAGCSLL------VVELVKQMHAHACKIGVTHDIVVASALLD 340
RM G+ D T +++ A +LL VV ++ +H C ++ V +AL+
Sbjct: 174 RMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC------NLYVCNALIS 227
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLIS 396
Y + A + F + D + N +I Y++ ++ +A + D M ++++
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
WN+I G + A++ M ++++ + + + AC+ L+ G +VF +
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLV 346
Query: 457 TVGLEFDHIIS---TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
F H I SL+ Y +C + VF + +WN+I+ G+A N E
Sbjct: 347 IRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV 573
L +EM SG P+ IT ++L G ++ G+ + + + ++ +V
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 574 DLYARAGCLGEAIDLIEEM 592
D+YA++G + A + + M
Sbjct: 467 DMYAKSGEIIAAKRVFDSM 485
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/535 (21%), Positives = 214/535 (40%), Gaps = 114/535 (21%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+QLH + +G+ S+ +L+ FYS LD+A + + + WN LI +++
Sbjct: 102 GQQLHAHCISSGLEFDSVLVP-KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYI 160
Query: 75 HSGHRNESLRLFHAMPEK-----------------------------------TH----Y 95
+ ES+ ++ M K +H Y
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
N L+S + + G + +A LFD M ++ + WN II+ Y+ +A L M L
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 156 LEMVHCDAGVLA--TVLGACAD---------CFA--LNCGKQVHARVIVEGIE------- 195
+E A ++ T+ G C + C NC ++ + ++ G++
Sbjct: 281 VE-----ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 196 LEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD 255
L++ KV +++ D+D+ ++L++ Y+ +R A VF
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVR--------------NSLITMYSRCSDLRHAFIVFQ 381
Query: 256 SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVEL 315
WNSIISG+ N E L K M G + T+A+IL + ++
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
K+ H + + D ++ L N+++ +Y+
Sbjct: 442 GKEFHCYILRRQSYKDCLI------------------------------LWNSLVDMYAK 471
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
G I AK +FD+M + +++ S++ G + A+ F M+ +K D + +V
Sbjct: 472 SGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAV 531
Query: 436 ISACASKSCLELGEQVFGK---AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF 487
+SAC+ + + G +F K + L +H + +VD YC+ G+++ R +F
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY--SCMVDLYCRAGYLDKARDIF 584
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 36/292 (12%)
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD--VSTVANILSAGCSLLV 312
D V Q VL+NS + +G+ EA F +R S + + + A++LS
Sbjct: 42 DESVPQ--VLFNSF-RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNE 98
Query: 313 VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITV 372
+Q+HAH G+ +D++L+ ++T
Sbjct: 99 FVPGQQLHAHCISSGL-------------------------------EFDSVLVPKLVTF 127
Query: 373 YSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
YS +++A+ I + + WN ++ +N E++ ++ RM ++ D+F++
Sbjct: 128 YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTY 187
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK 492
SVI ACA+ G V G + + +L+ Y + G V++ R++FD M +
Sbjct: 188 PSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE 247
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
D VSWN I+ Y + EA L M SGV S +T+ + C G
Sbjct: 248 RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
+S AS++S C + G+Q+ I+ GLEFD ++ LV FY ++ + + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 490 MIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC--------- 540
+ WN ++ Y N E++++++ M G+R T+ +V+ AC
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 541 --------------------------DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
G V+ R LFD M ++ ++ +++
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-----WNAIIN 258
Query: 575 LYARAGCLGEAIDLIEEMPF---QADANMWFSVLRGCIAHGN 613
Y LGEA L++ M +A W ++ GC+ GN
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
WN LV +AKSG++ A +FDSM ++ + + ++I GY + G AL+ FK M +
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI 521
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARV-IVEGIELEFDKVLCSSLVKFYGKCGD 215
+ H + VL AC+ + G + ++ V GI L + C +V Y + G
Sbjct: 522 KPDHV---TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC--MVDLYCRAGY 576
Query: 216 LDSAARVAGVVKEVDDFSLSA------LVSGYANAGKMREARRVFDSRVDQ 260
LD A + + ++ A L+ G N G+ + + +++ +
Sbjct: 577 LDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEH 627
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 283/573 (49%), Gaps = 42/573 (7%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
LV+ ++ L A ++ ++ + L WN +I Y + ++++S++K M + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMS---KGI 180
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D +V+ ACA G+ VH + V +C++L+ Y + G +D A
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL--YVCNALISMYKRFGKVDVA 238
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCAVLWNSIISGYVLN 275
R+ + E D S +A+++ Y + K+ EA ++ D S V+ V WN+I G +
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTHDIVV 334
G + AL MR V + N L A CS H A K G V H +V+
Sbjct: 299 GNYIGALNCVVGMRNCNVRIGSVAMINGLKA-CS----------HIGALKWGKVFHCLVI 347
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
S C F ++ + N++IT+YS C + A +F + + +L
Sbjct: 348 RS---------------CSFSHDIDN----VRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
+WNSI+ G A N E + M + + + AS++ A L+ G++
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 455 AITVGLEFD-HIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
+ D I+ SLVD Y K G + ++VFD M K D+V++ +++ GY G G
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV 573
AL F++M SG++P +T AVLSAC H+ LV EG LF M+H + I +EHYSCMV
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 574 DLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEK-IIQLDPENP 632
DLY RAG L +A D+ +P++ + M ++L+ C+ HGN IG+ AA+K +++ PE+
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQK 665
G Y+ L+++ A + W V+ L+ D VQK
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 186/439 (42%), Gaps = 53/439 (12%)
Query: 167 ATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV 226
A++L C G+Q+HA I G LEFD VL LV FY LD
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSG--LEFDSVLVPKLVTFYSAFNLLD--------- 135
Query: 227 KEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFK 286
EA+ + ++ + WN +I Y+ N E+++++K
Sbjct: 136 ----------------------EAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYK 173
Query: 287 RMRRHGVSGDVSTVANILSAGCSLL------VVELVKQMHAHACKIGVTHDIVVASALLD 340
RM G+ D T +++ A +LL VV ++ +H C ++ V +AL+
Sbjct: 174 RMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC------NLYVCNALIS 227
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLIS 396
Y + A + F + D + N +I Y++ ++ +A + D M ++++
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
WN+I G + A++ M ++++ + + + AC+ L+ G +VF +
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLV 346
Query: 457 TVGLEFDHIIS---TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
F H I SL+ Y +C + VF + +WN+I+ G+A N E
Sbjct: 347 IRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV 573
L +EM SG P+ IT ++L G ++ G+ + + + ++ +V
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 574 DLYARAGCLGEAIDLIEEM 592
D+YA++G + A + + M
Sbjct: 467 DMYAKSGEIIAAKRVFDSM 485
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/535 (21%), Positives = 214/535 (40%), Gaps = 114/535 (21%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+QLH + +G+ S+ +L+ FYS LD+A + + + WN LI +++
Sbjct: 102 GQQLHAHCISSGLEFDSVLVP-KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYI 160
Query: 75 HSGHRNESLRLFHAMPEK-----------------------------------TH----Y 95
+ ES+ ++ M K +H Y
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
N L+S + + G + +A LFD M ++ + WN II+ Y+ +A L M L
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 156 LEMVHCDAGVLA--TVLGACAD---------CFA--LNCGKQVHARVIVEGIE------- 195
+E A ++ T+ G C + C NC ++ + ++ G++
Sbjct: 281 VE-----ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 196 LEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD 255
L++ KV +++ D+D+ ++L++ Y+ +R A VF
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVR--------------NSLITMYSRCSDLRHAFIVFQ 381
Query: 256 SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVEL 315
WNSIISG+ N E L K M G + T+A+IL + ++
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
K+ H + + D ++ L N+++ +Y+
Sbjct: 442 GKEFHCYILRRQSYKDCLI------------------------------LWNSLVDMYAK 471
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
G I AK +FD+M + +++ S++ G + A+ F M+ +K D + +V
Sbjct: 472 SGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAV 531
Query: 436 ISACASKSCLELGEQVFGK---AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF 487
+SAC+ + + G +F K + L +H + +VD YC+ G+++ R +F
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY--SCMVDLYCRAGYLDKARDIF 584
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 36/292 (12%)
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD--VSTVANILSAGCSLLV 312
D V Q VL+NS + +G+ EA F +R S + + + A++LS
Sbjct: 42 DESVPQ--VLFNSF-RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNE 98
Query: 313 VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITV 372
+Q+HAH G+ +D++L+ ++T
Sbjct: 99 FVPGQQLHAHCISSGL-------------------------------EFDSVLVPKLVTF 127
Query: 373 YSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
YS +++A+ I + + WN ++ +N E++ ++ RM ++ D+F++
Sbjct: 128 YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTY 187
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK 492
SVI ACA+ G V G + + +L+ Y + G V++ R++FD M +
Sbjct: 188 PSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE 247
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
D VSWN I+ Y + EA L M SGV S +T+ + C G
Sbjct: 248 RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
+S AS++S C + G+Q+ I+ GLEFD ++ LV FY ++ + + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 490 MIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC--------- 540
+ WN ++ Y N E++++++ M G+R T+ +V+ AC
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 541 --------------------------DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
G V+ R LFD M ++ ++ +++
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-----WNAIIN 258
Query: 575 LYARAGCLGEAIDLIEEMPF---QADANMWFSVLRGCIAHGN 613
Y LGEA L++ M +A W ++ GC+ GN
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
WN LV +AKSG++ A +FDSM ++ + + ++I GY + G AL+ FK M +
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGI 521
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARV-IVEGIELEFDKVLCSSLVKFYGKCGD 215
+ H + VL AC+ + G + ++ V GI L + C +V Y + G
Sbjct: 522 KPDHV---TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSC--MVDLYCRAGY 576
Query: 216 LDSAARVAGVVKEVDDFSLSA------LVSGYANAGKMREARRVFDSRVDQ 260
LD A + + ++ A L+ G N G+ + + +++ +
Sbjct: 577 LDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEH 627
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/598 (27%), Positives = 266/598 (44%), Gaps = 79/598 (13%)
Query: 84 RLFHAMPEKT------HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSK 137
R+ HA KT + N L++ ++K + A + P +N + W ++I G ++
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQ 85
Query: 138 RGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA--RVIVEGIE 195
GH AL F M + G + F C + A R+ V G +
Sbjct: 86 NGHFSTALVEFFEMRRE----------------GVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 196 LEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD 255
+ V C ++ + C D Y +AR++FD
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDM----------------------YCKTRLRDDARKLFD 167
Query: 256 SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVEL 315
++ WN+ IS V +G EA+ F RR + T L+A L + L
Sbjct: 168 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
Q+H + G D+ V + L+D Y K
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGK------------------------------- 256
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
C +I ++ IF M +K +SW S++ +N +A ++ R ++ F +SV
Sbjct: 257 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSV 316
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
+SACA + LELG + A+ +E + ++LVD Y KCG +E + FD M + +
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNL 376
Query: 496 VSWNTILMGYATNGYGSEALTLFREM--RCSGVRPSAITFTAVLSACDHTGLVEEGRNLF 553
V+ N+++ GYA G AL LF EM R G P+ +TF ++LSAC G VE G +F
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF 436
Query: 554 DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN 613
D+M+ Y I P EHYSC+VD+ RAG + A + I++MP Q ++W ++ C HG
Sbjct: 437 DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGK 496
Query: 614 RTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
+G +AAE + +LDP++ G ++ LSN A + W + VRE + ++K G SW
Sbjct: 497 PQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L GR +H +K + ++ + L+ Y + GC++D+ Q FDEMP+ N + N+LI
Sbjct: 326 LELGRSIHAHAVKACV-ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIG 384
Query: 72 AHLHSGHRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
+ H G + +L LF M P + ++ L+SA +++G ++ +FDSM G
Sbjct: 385 GYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG 444
Query: 126 LV-----WNTIIHGYSKRGHPRKALSLFKTMSLDP 155
+ ++ I+ + G +A K M + P
Sbjct: 445 IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/560 (28%), Positives = 270/560 (48%), Gaps = 45/560 (8%)
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A +F+ +P + ++ +I GY++ AL+LF M + D +++
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR-------DVVSWNSMISG 106
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C +C +N ++ + + V +++V + G +D A R+ + D
Sbjct: 107 CVECGDMNTAVKLFDEMPERSV------VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
+ +++V GY GK+ +A ++F + + W ++I G N EAL LFK M R
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
+ +++A + + Q+H K+G ++ V+++L
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL-------------- 266
Query: 353 KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
IT Y+NC RI D++ +FD + + W ++L G + N +
Sbjct: 267 -----------------ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHED 309
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
A+ IF M + ++ +FAS +++C++ L+ G+++ G A+ +GLE D + SLV
Sbjct: 310 ALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVV 369
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y G V VF + K VSWN+I++G A +G G A +F +M P IT
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYN-INPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
FT +LSAC H G +E+GR LF M N I+ +I+HY+CMVD+ R G L EA +LIE
Sbjct: 430 FTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
Query: 592 MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGS 651
M + + +W ++L C H + G+ AA I LD ++ AY+ LSN+ A++ W
Sbjct: 490 MVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNV 549
Query: 652 AQVRELMIDKNVQKIPGCSW 671
+++R M + K PG SW
Sbjct: 550 SKLRVKMKKNGIMKKPGSSW 569
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 248/526 (47%), Gaps = 100/526 (19%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWN 67
+ R + E R++ F + + SL T +++ Y+R L DA LFDEMP + SWN
Sbjct: 47 LSRRIDEAREV---FNQVPSPHVSLYT--KMITGYTRSNRLVDALNLFDEMPVRDVVSWN 101
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV 127
++I + G N +++LF MPE++ SW +V+ +SG + A LF MP K+
Sbjct: 102 SMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA 161
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMS-------------LDPLE-----------MVHC-- 161
WN+++HGY + G AL LFK M LD E M+ C
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCI 221
Query: 162 --DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
+ V+ ACA+ A + G QVH +I G +++ + +SL+ F
Sbjct: 222 KSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG--FLYEEYVSASLITF---------- 269
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
YAN ++ ++R+VFD +V + +W +++SGY LN +
Sbjct: 270 ---------------------YANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHE 308
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+AL++F M R+ + + ST A+ L++ +L ++ K+MH A K+G+ D V
Sbjct: 309 DALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG---- 364
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
N+++ +YS+ G + DA +F + K+++SWNS
Sbjct: 365 ---------------------------NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
I+VG A++ A IF +M L+ + D+ +F ++SAC+ LE G ++F +
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGI 457
Query: 460 LEFDHIIS--TSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
D I T +VD +CG ++ ++ + M +K +E+ W +L
Sbjct: 458 NHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 192/396 (48%), Gaps = 14/396 (3%)
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD 296
L+ + + ++ EAR VF+ L+ +I+GY + ++AL LF M V
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 297 VSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFG 356
S ++ + G V+L +M + +V +A+++ +S +A + F
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERS--------VVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 357 ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDI 416
++ DT N+M+ Y G+++DA +F M K +ISW +++ GL +N EA+D+
Sbjct: 153 QMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 417 FCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCK 476
F M +K F VI+ACA+ +G QV G I +G ++ +S SL+ FY
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 477 CGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
C + RKVFD + W +L GY+ N +AL++F M + + P+ TF +
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 537 LSACDHTGLVEEGRNLFDTMKHNYNINPEIEHY--SCMVDLYARAGCLGEAIDLIEEMPF 594
L++C G ++ G+ + + E + + + +V +Y+ +G + +A+ + ++ F
Sbjct: 333 LNSCSALGTLDWGKEMHGVA---VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-F 388
Query: 595 QADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPE 630
+ W S++ GC HG + ++I+L+ E
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 174/698 (24%), Positives = 313/698 (44%), Gaps = 105/698 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
+ L G +H L G +S ++ L+ Y++ G L A ++F+EM + + W +
Sbjct: 60 QRLSFGLSIHQQVLVNG-FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAM 118
Query: 70 IEAHLHSGHRNESLRLFHAMP-------------------EKTHYS-------------- 96
I + +G E+ L + M E T
Sbjct: 119 IGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCD 178
Query: 97 ---WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
N +++ + K + A LFD M ++ + WNT+I GY+ G+ + L L M
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG 238
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
D L G +V G D L G+ +H +++ G ++ D L ++L+ Y KC
Sbjct: 239 DGLRPDQQTFGASLSVSGTMCD---LEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKC 293
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
GK + RV ++ ++ V W +ISG +
Sbjct: 294 -------------------------------GKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 274 LNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIV 333
G +AL +F M + G +A+++++ L +L +H + + G T
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYT---- 378
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
DT LN++IT+Y+ CG ++ + IF+ M+ +
Sbjct: 379 ---------------------------LDTPALNSLITMYAKCGHLDKSLVIFERMNERD 411
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLK-MDKFSFASVISACASKSCLELGEQVF 452
L+SWN+I+ G A+N +A+ +F M ++ +D F+ S++ AC+S L +G+ +
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGS 512
I + ++ T+LVD Y KCG++E ++ FD + D VSW ++ GY +G G
Sbjct: 472 CIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGD 531
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
AL ++ E SG+ P+ + F AVLS+C H G+V++G +F +M ++ + P EH +C+
Sbjct: 532 IALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACV 591
Query: 573 VDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENP 632
VDL RA + +A +E + ++ +L C A+G + + E +I+L P +
Sbjct: 592 VDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDA 651
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
G Y++L + A + W+ ++ M ++K+PG S
Sbjct: 652 GHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 210/482 (43%), Gaps = 76/482 (15%)
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA 187
+N+ I+ S G ++ LS F +M + L D ++L ACA L+ G +H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLP---DTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 188 RVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKM 247
+V+V G +F + SSLV Y K G L A +V ++E D +A++ Y+ AG
Sbjct: 71 QVLVNGFSSDF--YISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAG-- 126
Query: 248 REARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
I G EA +L MR G+ T+ +LS
Sbjct: 127 ---------------------IVG--------EACSLVNEMRFQGIKPGPVTLLEMLSG- 156
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLN 367
+L + ++ +H A G DI V +++L+ Y K +A F +++ D + N
Sbjct: 157 --VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWN 214
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM 427
TMI+ Y++ G + SE + + RM L+
Sbjct: 215 TMISGYASVGNM-------------------------------SEILKLLYRMRGDGLRP 243
Query: 428 DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF 487
D+ +F + +S + LE+G + + + G + D + T+L+ Y KCG E +V
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 488 DGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVE 547
+ + D V W ++ G G +AL +F EM SG S+ +V+++C G +
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 548 EGRNLFD-TMKHNYNIN-PEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVL 605
G ++ ++H Y ++ P + + ++ +YA+ G L +++ + E M + D W +++
Sbjct: 364 LGASVHGYVLRHGYTLDTPAL---NSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAII 419
Query: 606 RG 607
G
Sbjct: 420 SG 421
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 13/256 (5%)
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
+NS + L+ + + + F M L D F+F S++ ACAS L G + + +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALT 516
G D IS+SLV+ Y K G + RKVF+ M + D V W ++ Y+ G EA +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 517 LFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR-NLFDTMKHNYNINPEIEHYSCMVDL 575
L EMR G++P +T +LS G++E + Y + +I + M++L
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 576 YARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN-----RTIGKMAAEKIIQLDPE 630
Y + +G+A DL ++M Q D W +++ G + GN + + +M + ++ D +
Sbjct: 189 YCKCDHVGDAKDLFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG-LRPDQQ 246
Query: 631 NPGAYIQLSNVLATSE 646
GA + +S + E
Sbjct: 247 TFGASLSVSGTMCDLE 262
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/659 (25%), Positives = 293/659 (44%), Gaps = 110/659 (16%)
Query: 50 DATQLFDEMPQTNAFSWNTLIEA------------HLHSGHRNESLRLFHAMP------- 90
DA Q+F EM + + + WNTL+++ H R+E +P
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 91 --------EKTH-------------YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
E H Y + L+ + K G + A +FD + + + W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
+++ G+ K G P +A+ F+ M + V D L T++ AC G+ VH V
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVM--ASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSL-SALVSGYANAGKMR 248
I G +D SL ++L++ YA + +
Sbjct: 190 IRRGFS----------------------------------NDLSLVNSLLNCYAKSRAFK 215
Query: 249 EARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
EA +F ++ + W+++I+ YV NG EAL +F M G +V+TV +L A
Sbjct: 216 EAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA 275
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT 368
+ +E ++ H A + G+ ++ V++AL+D Y K P
Sbjct: 276 AAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP-------------------- 315
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD-LKM 427
E+A +F + K ++SW +++ G N +I+ F M + + +
Sbjct: 316 -----------EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 428 DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF 487
D V+ +C+ LE + I G + + I SLV+ Y +CG + KVF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 488 DGMIKTDEVSWNTILMGYATNGYGSEALTLFREM-RCSGVRPSAITFTAVLSACDHTGLV 546
+G+ D V W +++ GY +G G++AL F M + S V+P+ +TF ++LSAC H GL+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 547 EEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLR 606
EG +F M ++Y + P +EHY+ +VDL R G L AI++ + MPF + ++L
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Query: 607 GCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQK 665
C H N + + A+K+ +L+ + G Y+ +SNV +WE ++R + + ++K
Sbjct: 545 ACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 603
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 174/441 (39%), Gaps = 77/441 (17%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R + G +H K L S L + L+ Y + G + +A ++FDE+ + + +W+++
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 70 IEAHLHSGHRNESLRLFHAM-------PEK----------THYS---------------- 96
+ +G +++ F M P++ T S
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 97 -------WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
N L++ +AKS + A +LF + K+ + W+T+I Y + G +AL +F
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
M D E + + VL ACA L G++ H I +G+E E + ++LV
Sbjct: 254 DMMDDGTE---PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK--VSTALVDM 308
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
Y KC + A V + D V W ++I
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKD-------------------------------VVSWVALI 337
Query: 270 SGYVLNGEEMEALALFKRM-RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
SG+ LNG ++ F M + D + +L + L +E K H++ K G
Sbjct: 338 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 397
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDT 388
+ + ++L++ YS+ A K F + DT++ ++IT Y G+ A F+
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 389 MSSKTLISWNSILVGLAKNAC 409
M + + N + +AC
Sbjct: 458 MVKSSEVKPNEVTFLSILSAC 478
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 185/702 (26%), Positives = 318/702 (45%), Gaps = 111/702 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R + G ++H S +KTG +S+ ++ L YS+ G +A +LF + + SW +
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSS-LSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 70 IEAHLHSGHRNESLRLFHAMPE-------------------------KTHYS-------- 96
I + + + E+L+ + M + KT +S
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 97 -----WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF--- 148
LV +++ ++ A + +S ++ +W +++ G+ + ++A+ F
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+++ L P + + +L C+ +L+ GKQ+H++ I G E D + ++LV
Sbjct: 317 RSLGLQPNNFTY------SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD--VGNALVD 368
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
Y KC SA+ V EA RVF + V V W ++
Sbjct: 369 MYMKC----SASEV--------------------------EASRVFGAMVSPNVVSWTTL 398
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
I G V +G + L M + V +V T++ +L A L V V ++HA+ + V
Sbjct: 399 ILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHV 458
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDT 388
++VV ++L+DAY+ S+ A +K D I +++T ++ G+ E A + +
Sbjct: 459 DGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINY 518
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
M ++MD+ S ISA A+ LE G
Sbjct: 519 MYGD-------------------------------GIRMDQLSLPGFISASANLGALETG 547
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
+ + ++ G + SLVD Y KCG +E +KVF+ + D VSWN ++ G A+N
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASN 607
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
G+ S AL+ F EMR P ++TF +LSAC + L + G F MK YNI P++EH
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEH 667
Query: 569 YSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLD 628
Y +V + RAG L EA ++E M + +A ++ ++LR C GN ++G+ A K + L
Sbjct: 668 YVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALA 727
Query: 629 PENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
P +P YI L+++ S E + + R LM +K + K G S
Sbjct: 728 PSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKS 769
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 151/647 (23%), Positives = 262/647 (40%), Gaps = 125/647 (19%)
Query: 13 REGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEA 72
R G +H +K G+L + L N LL Y + + +A +LFDEM F+W +I A
Sbjct: 40 RIGLHIHCPVIKFGLLEN-LDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISA 98
Query: 73 HLHSGHRNESLRLFHAM------PE----------------------------KTHYSWN 98
S +L LF M P KT + N
Sbjct: 99 FTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN 158
Query: 99 MLVSA-----FAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM-- 151
+V + ++K G + A LF S+ + + W +I R+AL + M
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Query: 152 -SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
+ P E +LGA + L GK +H+ +IV GI L + VL +SLV FY
Sbjct: 219 AGVPPNEFT------FVKLLGA-SSFLGLEFGKTIHSNIIVRGIPL--NVVLKTSLVDFY 269
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
+ FS KM +A RV +S +Q LW S++S
Sbjct: 270 SQ-------------------FS------------KMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
G+V N EA+ F MR G+ + T + ILS ++ ++ KQ+H+ K+G
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 331 DIVVASALLDAYSK-SQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM 389
V +AL+D Y K S EA + FG M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFG-------------------------------AM 387
Query: 390 SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGE 449
S ++SW ++++GL + + + M +++ + + + V+ AC+ +
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 450 QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNG 509
++ + ++ + ++ SLVD Y V+ V M + D +++ +++ + G
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH- 568
AL++ M G+R ++ +SA + G +E G++L H Y++
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL-----HCYSVKSGFSGA 562
Query: 569 ---YSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ +VD+Y++ G L +A + EE+ D W ++ G ++G
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNG 608
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 9/296 (3%)
Query: 340 DAYSKSQGPHEACKF--FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
++ S G H C FG L+ D L N ++++Y I +A+ +FD MS +T+ +W
Sbjct: 35 ESNSSRIGLHIHCPVIKFGLLENLD--LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAW 92
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
++ K+ + A+ +F M ++F+F+SV+ +CA + G +V G I
Sbjct: 93 TVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIK 152
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
G E + ++ +SL D Y KCG + ++F + D +SW ++ EAL
Sbjct: 153 TGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQF 212
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYA 577
+ EM +GV P+ TF +L A GL E G+ + + I + + +VD Y+
Sbjct: 213 YSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYS 270
Query: 578 RAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAH--GNRTIGKMAAEKIIQLDPEN 631
+ + +A+ ++ Q D +W SV+ G + + +G + + L P N
Sbjct: 271 QFSKMEDAVRVLNSSGEQ-DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 224/423 (52%), Gaps = 2/423 (0%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
A RVF + +++N++I Y L G +E+L+ F M+ G+ D T A +L + S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
L + K +H + G + +++ Y+ +A K F E+ + ++ N M
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
I + + G +E +F MS ++++SWNS++ L+K EA+++FC M D+
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHI-ISTSLVDFYCKCGFVEIGRKVFD 488
+ +V+ AS L+ G+ + A + GL D I + +LVDFYCK G +E +F
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 489 GMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG-VRPSAITFTAVLSACDHTGLVE 547
M + + VSWNT++ G A NG G + LF M G V P+ TF VL+ C +TG VE
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 548 EGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
G LF M + + EHY MVDL +R+G + EA ++ MP A+A MW S+L
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 608 CIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIP 667
C +HG+ + ++AA ++++++P N G Y+ LSN+ A W+ +VR LM ++K
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKST 474
Query: 668 GCS 670
G S
Sbjct: 475 GQS 477
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 174/401 (43%), Gaps = 40/401 (9%)
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A+ +F + N LV+N +I YS G P ++LS F +M + D A +L +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG---IWADEYTYAPLLKS 111
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C+ L GK VH +I G K+ +V+ Y G + A +V + E +
Sbjct: 112 CSSLSDLRFGKCVHGELIRTGFH-RLGKIRIG-VVELYTSGGRMGDAQKVFDEMSERNVV 169
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
+ ++ G+ ++G + +F ++ V WNS+IS G + EAL LF M G
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD-IVVASALLDAYSKSQGPHEA 351
D +TV +L SL V++ K +H+ A G+ D I V +AL+D Y KS
Sbjct: 230 FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS------ 283
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
G +E A IF M + ++SWN+++ G A N
Sbjct: 284 -------------------------GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGE 318
Query: 412 EAIDIFCRM-NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT-VGLEFDHIISTS 469
ID+F M + ++ +F V++ C+ +E GE++FG + LE +
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 470 LVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNG 509
+VD + G + K M + + W ++L ++G
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 25/247 (10%)
Query: 69 LIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVW 128
++E + G ++ ++F M E+ WN+++ F SGD++ LF M ++ + W
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 129 NTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQV 185
N++I SK G R+AL LF M DP D + TVL A L+ GK +
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDP------DEATVVTVLPISASLGVLDTGKWI 256
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAG 245
H+ G+ +F V ++LV FY K GDL++A + ++ + S + L+SG A G
Sbjct: 257 HSTAESSGLFKDFITV-GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNG 315
Query: 246 KMREARRVFDSRVDQCAVLWNSII----------SGYVLNGEE-----MEALALFKRMRR 290
K +FD+ +++ V N +G V GEE ME L R
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 291 HGVSGDV 297
+G D+
Sbjct: 376 YGAMVDL 382
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 119/286 (41%), Gaps = 32/286 (11%)
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNM 422
+LL I++ + + A +F + + ++ +N+++ + P E++ F M
Sbjct: 36 NLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKS 95
Query: 423 LDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEI 482
+ D++++A ++ +C+S S L G+ V G+ I G I +V+ Y G +
Sbjct: 96 RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGD 155
Query: 483 GRKVFDGMIKTDEVSWNTILMGYATN-------------------------------GYG 511
+KVFD M + + V WN ++ G+ + G
Sbjct: 156 AQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRD 215
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
EAL LF EM G P T VL G+++ G+ + T + + I +
Sbjct: 216 REALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNA 275
Query: 572 MVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIG 617
+VD Y ++G L A + +M + + W +++ G +G G
Sbjct: 276 LVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFG 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
L G+ +H + +G+ +T N L+ FY + G L+ AT +F +M + N SWNTLI
Sbjct: 249 VLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLI 308
Query: 71 EAHLHSGHRNESLRLFHAMPEKTHYSWNM-----LVSAFAKSGDLQLAHSLFDSMPCKNG 125
+G + LF AM E+ + N +++ + +G ++ LF M +
Sbjct: 309 SGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFK 368
Query: 126 LVWNTIIHG-----YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
L T +G S+ G +A K M V+ +A + ++L AC
Sbjct: 369 LEARTEHYGAMVDLMSRSGRITEAFKFLKNMP------VNANAAMWGSLLSAC 415
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 186/706 (26%), Positives = 315/706 (44%), Gaps = 90/706 (12%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
+ +H SFLK + L N L+ Y + G +A +F + S+ LI
Sbjct: 100 KAVHASFLKLREEKTRL--GNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSR 157
Query: 76 SGHRNESLRLFHAMP-----EKTHYSWNMLVSA----------------FAKSGDLQLAH 114
E+L++F M + Y++ +++A KSG L
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVF 217
Query: 115 ---------------------SLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
LFD +P ++ WNT++ K G KA LF M
Sbjct: 218 VSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM-- 275
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
+ +E D+ L+T+L +C D L G+++H R I G+ E + ++L+ FY K
Sbjct: 276 NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS--VNNALIGFYSKF 333
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
D+ + ++ D + + +++ Y + G + A +F + ++ + +N++++G+
Sbjct: 334 WDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFC 393
Query: 274 LNGEEMEALALFKRMRRHGVS-GDVSTVANILSAGCSLLVVE--LVKQMHAHACKIGVTH 330
NG ++AL LF M + GV D S + + + G LV E + +Q+H K G
Sbjct: 394 RNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACG---LVSEKKVSEQIHGFCIKFGTAF 450
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
+ + +ALLD ++ C R+ DA+ +FD
Sbjct: 451 NPCIQTALLDMCTR-------------------------------CERMADAEEMFDQWP 479
Query: 391 SK--TLISWNSILVGLAKNACPSEAIDIFCR-MNMLDLKMDKFSFASVISACASKSCLEL 447
S + + SI+ G A+N P +A+ +F R + L +D+ S +++ C + E+
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM 539
Query: 448 GEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYAT 507
G Q+ A+ G D + SL+ Y KC + K+F+ M + D +SWN+++ Y
Sbjct: 540 GYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYIL 599
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT--GLVEEGRNLFDTMKHNYNINPE 565
G EAL L+ M ++P IT T V+SA +T + R+LF +MK Y+I P
Sbjct: 600 QRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Query: 566 IEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKII 625
EHY+ V + G L EA D I MP Q + ++ ++L C H N ++ K A+ I+
Sbjct: 660 TEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLIL 719
Query: 626 QLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
PE P YI SN+ + S W S +RE M ++ +K P SW
Sbjct: 720 STKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSW 765
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 196/482 (40%), Gaps = 108/482 (22%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRG--CLDDATQLFDEMPQTNAFSWNTLIEA 72
G Q+H +K+G LNS + N L+ Y + DD +LFDE+PQ + SWNT++ +
Sbjct: 200 GIQIHGLIVKSGFLNSVFVS-NSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSS 258
Query: 73 HLHSGHRNESLRLFHAMPEKTHYSW----------------------------------- 97
+ G +++ LF+ M +
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 98 -----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
N L+ ++K D++ SL++ M ++ + + +I Y G A+ +F ++
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIEL-EFDKVLCSSLVKFYG 211
+ A + G C + L K + ++ G+EL +F SL
Sbjct: 379 EKNTITYN------ALMAGFCRNGHGLKALK-LFTDMLQRGVELTDF------SLTSAVD 425
Query: 212 KCGDLDSAARVAGVVKEVDDFSL-----------SALVSGYANAGKMREARRVFD---SR 257
CG L S +V+ +++ F + +AL+ +M +A +FD S
Sbjct: 426 ACG-LVSEKKVS---EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSN 481
Query: 258 VDQCAVLWNSIISGYVLNGEEMEALALFKR-MRRHGVSGDVSTVANILSAGCSLLVVELV 316
+D SII GY NG +A++LF R + + D ++ IL+ +L E+
Sbjct: 482 LDSSKAT-TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNC 376
Q+H +A K G DI + ++L+ Y+K +A K F ++ +D I N++I+ Y
Sbjct: 541 YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYI-- 598
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
L +N EA+ ++ RMN ++K D + VI
Sbjct: 599 ---------------------------LQRNG--DEALALWSRMNEKEIKPDIITLTLVI 629
Query: 437 SA 438
SA
Sbjct: 630 SA 631
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 182/703 (25%), Positives = 305/703 (43%), Gaps = 133/703 (18%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
R LH +K G + ++ L+ Y L A +F+E+ + + SW T++ A+ H
Sbjct: 221 RCLHGLVIKKGFI---FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH 277
Query: 76 SGHRNESLRLFHAMPEKTHYSWNM------------------------------------ 99
+G E L LF M +Y M
Sbjct: 278 NGFFEEVLELFDLM---RNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD 334
Query: 100 ------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM-- 151
L+S ++K G+L++A LF ++ ++ + W+ +I Y + G +A+SLF+ M
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR 394
Query: 152 -SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
+ P +A L +VL CA A GK +H I IE E +
Sbjct: 395 IHIKP------NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE----------- 437
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
+ +A++S YA G+ A + F+ + AV +N++
Sbjct: 438 ----------------------TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
GY G+ +A ++K M+ HGV D T+ +L ++ K G
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
+ VA AL++ ++K L I ++ CG F+
Sbjct: 536 ECHVAHALINMFTKCDA------------------LAAAIVLFDKCG--------FE--- 566
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
K+ +SWN ++ G + EA+ F +M + + + +F +++ A A S L +G
Sbjct: 567 -KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 451 VFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGY 510
V I G + SLVD Y KCG +E K F + VSWNT+L YA +G
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 511 GSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYS 570
S A++LF M+ + ++P +++F +VLSAC H GLVEEG+ +F+ M + I E+EHY+
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 571 CMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPE 630
CMVDL +AG GEA++++ M + +W ++L H N + A ++++L+P
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPL 805
Query: 631 NPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
NP Y Q ++ E+ ++K+P CSW +
Sbjct: 806 NPSHYSQ-------------DRRLGEVNNVSRIKKVPACSWIE 835
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/673 (22%), Positives = 277/673 (41%), Gaps = 122/673 (18%)
Query: 17 QLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHS 76
Q+H S + +G L N+L+ YS D + +FD + WN++I + +
Sbjct: 23 QVHGSLIVSG-----LKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 77 GHRNESLRLFHAM-------PEKTHYSWNM------------------------------ 99
G E+L F M P+K +++ +
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 100 ---LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
LV + K+ DL A +FD M K+ + WNT++ G ++ G AL LF M +
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
++ H L ++ A + + + +H VI +G F S L+ Y C DL
Sbjct: 198 DIDHVS---LYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS----SGLIDMYCNCADL 250
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
+A V V D+ S +++ YA+ NG
Sbjct: 251 YAAESVFEEVWRKDESSWGTMMAAYAH-------------------------------NG 279
Query: 277 EEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVK--QMHAHACKIGVTHDIVV 334
E L LF MR + V ++ VA + + V +LVK +H +A + G+ D+ V
Sbjct: 280 FFEEVLELFDLMRNYDVR--MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
A++L+ YSK GEL+ + + +N IED + +
Sbjct: 338 ATSLMSMYSKC----------GELEIAEQLFIN-----------IED----------RDV 366
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
+SW++++ + EAI +F M + +K + + SV+ CA + LG+ +
Sbjct: 367 VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
AI +E + +T+++ Y KCG K F+ + D V++N + GY G ++A
Sbjct: 427 AIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKA 486
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF-DTMKHNYNINPEIEHYSCMV 573
+++ M+ GV P + T +L C G ++ +KH ++ + H ++
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALI 544
Query: 574 DLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPG 633
+++ + L AI L ++ F+ W ++ G + HG +A + ++++ P
Sbjct: 545 NMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE-EAVATFRQMKVEKFQPN 603
Query: 634 AYIQLSNVLATSE 646
A ++ V A +E
Sbjct: 604 AVTFVNIVRAAAE 616
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 149/708 (21%), Positives = 274/708 (38%), Gaps = 154/708 (21%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
++G ++H + G L S + L++ Y + L A Q+FD+M + +WNT++
Sbjct: 116 FKKGLRIHDLIAEMG-LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 72 AHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAK--------------------- 106
+G + +L LFH M + H S L+ A +K
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 107 ------------SGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
DL A S+F+ + K+ W T++ Y+ G + L LF M
Sbjct: 235 AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY 294
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
+ M A D L G +H + +G L D + +SL+ Y KCG
Sbjct: 295 DVRMNKVAAASALQAAAYVGD---LVKGIAIHDYAVQQG--LIGDVSVATSLMSMYSKCG 349
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
+L+ A ++ +++ D S SA+++ Y A
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQA------------------------------ 379
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVV 334
G+ EA++LF+ M R + + T+ ++L + L K +H +A K + ++
Sbjct: 380 -GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
A+A++ Y+K CGR A F+ + K
Sbjct: 439 ATAVISMYAK-------------------------------CGRFSPALKAFERLPIKDA 467
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
+++N++ G + ++A D++ M + + D + ++ CA S G V+G+
Sbjct: 468 VAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNGYGSE 513
I G + + ++ +L++ + KC + +FD + VSWN ++ GY +G E
Sbjct: 528 IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEE 587
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSA----------------------CDHT-------- 543
A+ FR+M+ +P+A+TF ++ A C T
Sbjct: 588 AVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVD 647
Query: 544 -----GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDL---IEEMPFQ 595
G++E F + + Y I ++ M+ YA G A+ L ++E +
Sbjct: 648 MYAKCGMIESSEKCFIEISNKY-----IVSWNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 596 ADANMWFSVLRGC-----IAHGNRTIGKMAAEKIIQLDPENPGAYIQL 638
D+ + SVL C + G R +M I+ + E+ + L
Sbjct: 703 PDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDL 750
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 216/411 (52%), Gaps = 35/411 (8%)
Query: 264 LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
L+NS+I + +A ++RM VS T +++ + L + + K +H HA
Sbjct: 74 LFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHA 133
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAK 383
G D V +AL +T YS CG +E A+
Sbjct: 134 VVSGFGLDTYVQAAL-------------------------------VTFYSKCGDMEGAR 162
Query: 384 WIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKS 443
+FD M K++++WNS++ G +N EAI +F +M + D +F S++SACA
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 444 CLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILM 503
+ LG V I+ GL+ + + T+L++ Y +CG V R+VFD M +T+ +W ++
Sbjct: 223 AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMIS 282
Query: 504 GYATNGYGSEALTLFREMRCS-GVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
Y T+GYG +A+ LF +M G P+ +TF AVLSAC H GLVEEGR+++ M +Y +
Sbjct: 283 AYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRL 342
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN---MWFSVLRGCIAHGNRTIGKM 619
P +EH+ CMVD+ RAG L EA I ++ A +W ++L C H N +G
Sbjct: 343 IPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVE 402
Query: 620 AAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
A+++I L+P+NPG ++ LSN+ A S + + +R+ M+ N++K G S
Sbjct: 403 IAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYS 453
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 136/262 (51%), Gaps = 13/262 (4%)
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD 424
LL +IT+ + I +F ++ +NS++ +K P + + RM +
Sbjct: 43 LLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSN 102
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
+ ++F SVI +CA S L +G+ V A+ G D + +LV FY KCG +E R
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGAR 162
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
+VFD M + V+WN+++ G+ NG EA+ +F +MR SG P + TF ++LSAC TG
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 545 LVEEGRNLFDTMKHNYNINP----EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM 600
V G + H Y I+ ++ + +++LY+R G +G+A ++ ++M + +
Sbjct: 223 AVSLG-----SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAA 276
Query: 601 WFSVLRGCIAHGNRTIGKMAAE 622
W +++ A+G G+ A E
Sbjct: 277 WTAMIS---AYGTHGYGQQAVE 295
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 186/450 (41%), Gaps = 92/450 (20%)
Query: 71 EAHLHSGHRNESLRLFHAMPEKTHYS-----WNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
EA + +G R + L+ HA T Y L++ + + H LF S+P +
Sbjct: 13 EAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDD 72
Query: 126 LVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCG 182
++N++I SK P ++ ++ M ++ P +V+ +CAD AL G
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYT------FTSVIKSCADLSALRIG 126
Query: 183 KQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYA 242
K VH +V G L D + +ALV+ Y+
Sbjct: 127 KGVHCHAVVSGFGL---------------------------------DTYVQAALVTFYS 153
Query: 243 NAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVAN 302
G M AR+VFD ++ V WNS++SG+ NG EA+ +F +MR G D +T +
Sbjct: 154 KCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVS 213
Query: 303 ILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYD 362
+LSA V L +H + G+ ++ + +AL
Sbjct: 214 LLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL------------------------ 249
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM-N 421
I +YS CG + A+ +FD M + +W +++ + +A+++F +M +
Sbjct: 250 -------INLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKA-----ITVGLEFDHIISTSLVDFYCK 476
+ +F +V+SACA +E G V+ + + G+E H+ +VD +
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVE-HHV---CMVDMLGR 358
Query: 477 CGFVEIGRKVFDGMIKTDEVS----WNTIL 502
GF++ K + T + + W +L
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAML 388
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 59/283 (20%)
Query: 12 LREGRQLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
LR G+ +H + +G L++ + A L+ FYS+ G ++ A Q+FD MP+ + +WN+L+
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAA--LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180
Query: 71 EAHLHSGHRNESLRLFHAM------PEKTHY----------------SW----------- 97
+G +E++++F+ M P+ + SW
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLD 240
Query: 98 ------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
L++ +++ GD+ A +FD M N W +I Y G+ ++A+ LF M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 152 SLD--PLEMVHCDAGVLATVLGACADCFALNCGKQVHARV-----IVEGIELEFDKVLCS 204
D P+ + VL ACA + G+ V+ R+ ++ G+E +C
Sbjct: 301 EDDCGPIP----NNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHH----VC- 351
Query: 205 SLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKM 247
+V G+ G LD A + + + AL + A KM
Sbjct: 352 -MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKM 393
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 165/609 (27%), Positives = 294/609 (48%), Gaps = 67/609 (11%)
Query: 76 SGHRNESLRLFH---------AMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
S + S++LF+ + P W L+ K G + A LFD +P ++ +
Sbjct: 21 SSDNDRSVQLFNLVRSIYSSSSRPRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVV 78
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
W +I GY K G R+A LF +V
Sbjct: 79 TWTHVITGYIKLGDMREARELFD----------------------------------RVD 104
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
+R V V +++V Y + L A + + E + S + ++ GYA +G+
Sbjct: 105 SRKNV---------VTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGR 155
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
+ +A +FD ++ V WNS++ V G EA+ LF+RM R V + V +
Sbjct: 156 IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKN 215
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
G L M +I+ +A++ Y+++ EA + F + D
Sbjct: 216 GKVDEARRLFDCMP--------ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASW 267
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD-- 424
NTMIT + + A +FD M K +ISW +++ G +N EA+++F +M + D
Sbjct: 268 NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM-LRDGS 326
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
+K + ++ S++SAC+ + L G+Q+ + + I++++L++ Y K G + R
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 485 KVFD-GMI-KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
K+FD G++ + D +SWN+++ YA +G+G EA+ ++ +MR G +PSA+T+ +L AC H
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSH 446
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
GLVE+G F + + ++ EHY+C+VDL RAG L + + I + + +
Sbjct: 447 AGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
++L C H +I K +K+++ ++ G Y+ +SN+ A + E +A++R M +K
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Query: 663 VQKIPGCSW 671
++K PGCSW
Sbjct: 567 LKKQPGCSW 575
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 212/471 (45%), Gaps = 83/471 (17%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
+RE R+L F + ++ T ++ Y R L A LF EMP+ N SWNT+I+
Sbjct: 93 MREAREL---FDRVDS-RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMID 148
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
+ SG +++L LF MPE+ SWN +V A + G + A +LF+ MP ++ + W +
Sbjct: 149 GYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAM 208
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIV 191
+ G +K G +A LF DC
Sbjct: 209 VDGLAKNGKVDEARRLF--------------------------DCMP------------- 229
Query: 192 EGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREAR 251
E + + ++++ Y + +D A ++ V+ E D S + +++G+ +M +A
Sbjct: 230 -----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTVANILSAGCSL 310
+FD ++ + W ++I+GYV N E EAL +F +M R G V +V T +ILSA L
Sbjct: 285 GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 311 LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMI 370
+ +Q+H K + +V SALL+ YSKS GEL A + N ++
Sbjct: 345 AGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKS----------GELIAARKMFDNGLV 394
Query: 371 TVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
C R LISWNS++ A + EAI+++ +M K
Sbjct: 395 -----CQR--------------DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 431 SFASVISACASKSCLELGEQVFGKAI---TVGLEFDHIISTSLVDFYCKCG 478
++ +++ AC+ +E G + F + ++ L +H T LVD + G
Sbjct: 436 TYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHY--TCLVDLCGRAG 484
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 243/435 (55%), Gaps = 9/435 (2%)
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
+R A +VFD + + ++I +V +EA FKR+ G+ + T ++ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
+ V+L KQ+H +A K+G+ ++ V SA+L+ Y K +A + F + + + + +
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
+I+ Y E+A +F M +++++WN+++ G ++ EA++ F M +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 427 M-DKFSFASVISACASKSCLELGEQVFGKAIT-VGLEFDHIISTSLVDFYCKCGFVEIGR 484
+ ++ +F I+A ++ + G+ + AI +G F+ + SL+ FY KCG +E
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 485 KVFDGMIKTDE--VSWNTILMGYATNGYGSEALTLFREM-RCSGVRPSAITFTAVLSACD 541
F+ + + VSWN+++ GYA NG G EA+ +F +M + + +RP+ +T VL AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 542 HTGLVEEGRNLFDTMKHNYNINP---EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
H GL++EG F+ ++Y+ +P E+EHY+CMVD+ +R+G EA +LI+ MP
Sbjct: 343 HAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 599 NMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELM 658
W ++L GC H N+ + K+AA KI++LDP + +Y+ LSN + E+W+ + +R M
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 659 IDKNVQKIPGCSWAD 673
+ +++ GCSW +
Sbjct: 462 KETGLKRFTGCSWIE 476
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 182/439 (41%), Gaps = 69/439 (15%)
Query: 92 KTHYSWNMLVSAFAKS---------GDL-QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHP 141
K H S N LV+ S DL + AH +FD +P + + +I + K
Sbjct: 15 KYHSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRH 74
Query: 142 RKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEF 198
+A FK + + P E TV+G+ + GKQ+H + G L
Sbjct: 75 VEASQAFKRLLCLGIRPNEFT------FGTVIGSSTTSRDVKLGKQLHCYALKMG--LAS 126
Query: 199 DKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRV 258
+ + S+++ Y K L A R ++ + S++ L+SGY + EA +F +
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 259 DQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQ 318
++ V WN++I G+ G EA+ F M R GV + N + C++ + +
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV-----VIPNESTFPCAITAISNIAS 241
Query: 319 MHA----HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYS 374
A HAC A KF G K ++ + N++I+ YS
Sbjct: 242 HGAGKSIHAC--------------------------AIKFLG--KRFNVFVWNSLISFYS 273
Query: 375 NCGRIEDAKWIFDTM--SSKTLISWNSILVGLAKNACPSEAIDIFCRM-NMLDLKMDKFS 431
CG +ED+ F+ + + ++SWNS++ G A N EA+ +F +M +L+ + +
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 432 FASVISACASKSCLELGEQVFGKAITVG-----LEFDHIISTSLVDFYCKCGFVEIGRKV 486
V+ AC ++ G F KA+ LE +H +VD + G + ++
Sbjct: 334 ILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEEL 391
Query: 487 FDGMIKTDEVS-WNTILMG 504
M + W +L G
Sbjct: 392 IKSMPLDPGIGFWKALLGG 410
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 64/279 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R ++ G+QLH LK G L S++ + +L Y + L DA + FD+ N S L
Sbjct: 107 RDVKLGKQLHCYALKMG-LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN 129
I S + K + + A SLF +MP ++ + WN
Sbjct: 166 I-------------------------------SGYLKKHEFEEALSLFRAMPERSVVTWN 194
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV 189
+I G+S+ G +A++ F M + + V + + A ++ + GK +HA
Sbjct: 195 AVIGGFSQTGRNEEAVNTFVDMLREGV--VIPNESTFPCAITAISNIASHGAGKSIHA-C 251
Query: 190 IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMRE 249
++ + F+ + +SL+ FY KCG+++ SL A K+ E
Sbjct: 252 AIKFLGKRFNVFVWNSLISFYSKCGNMED--------------SLLAF-------NKLEE 290
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
+R V WNS+I GY NG EA+A+F++M
Sbjct: 291 EQRNI--------VSWNSMIWGYAHNGRGEEAVAMFEKM 321
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 238 bits (608), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 218/436 (50%), Gaps = 47/436 (10%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLN-GEEMEALALFKRMRRHGVSG-DVSTVANILSAG 307
A RVFDS + + +WN++I + + EA L+++M G S D T +L A
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLN 367
+ KQ+H K G D+ V N
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVN-------------------------------N 190
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM 427
+I +Y +CG ++ A+ +FD M ++L+SWNS++ L + A+ +F M +
Sbjct: 191 GLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEP 249
Query: 428 DKFSFASVISACASKSCLELGEQVFG---KAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
D ++ SV+SACA L LG + V + D ++ SL++ YCKCG + +
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM--RCSGVRPSAITFTAVLSACDH 542
+VF GM K D SWN +++G+AT+G EA+ F M + VRP+++TF +L AC+H
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 369
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
G V +GR FD M +Y I P +EHY C+VDL ARAG + EAID++ MP + DA +W
Sbjct: 370 RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 429
Query: 603 SVLRGCIAHGNRT-IGKMAAEKIIQLDPEN-------PGAYIQLSNVLATSEDWEGSAQV 654
S+L C G + + A II +N GAY+ LS V A++ W V
Sbjct: 430 SLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIV 489
Query: 655 RELMIDKNVQKIPGCS 670
R+LM + ++K PGCS
Sbjct: 490 RKLMSEHGIRKEPGCS 505
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 200/496 (40%), Gaps = 117/496 (23%)
Query: 82 SLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTII----HGYSK 137
+LR + T + + ++ + D+ A +FDS+ + +WNT+I H S+
Sbjct: 71 TLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSR 130
Query: 138 RGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE 197
+ +A L++ M L+ E D VL ACA F + GKQVH +++ G
Sbjct: 131 K---EEAFMLYRKM-LERGESSP-DKHTFPFVLKACAYIFGFSEGKQVHCQIVKHG--FG 183
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSR 257
D + + L+ YG CG LD A R+VFD
Sbjct: 184 GDVYVNNGLIHLYGSCGCLDLA-------------------------------RKVFDEM 212
Query: 258 VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVK 317
++ V WNS+I V GE AL LF+ M+R D T+ ++LSA L + L
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGT 271
Query: 318 QMHA---HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYS 374
HA C + V D++V N++I +Y
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVK-------------------------------NSLIEMYC 300
Query: 375 NCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM--NMLDLKMDKFSF 432
CG + A+ +F M + L SWN++++G A + EA++ F RM +++ + +F
Sbjct: 301 KCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTF 360
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK 492
++ AC + + G Q F + D+ I +L + C +
Sbjct: 361 VGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPALEHYGCIVDLI------------ 403
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG----LVEE 548
A GY +EA+ + M ++P A+ + ++L AC G L EE
Sbjct: 404 -------------ARAGYITEAIDMVMSM---PMKPDAVIWRSLLDACCKKGASVELSEE 447
Query: 549 -GRNLFDTMKHNYNIN 563
RN+ T + N + N
Sbjct: 448 IARNIIGTKEDNESSN 463
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 52/291 (17%)
Query: 16 RQLHVSFLKTGILN--SSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
+QLH L+T ++L ++LQ S ++ A ++FD + ++F WNTLI A
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 74 LHS-GHRNESLRLFHAM-------PEKTHYSW---------------------------- 97
H + E+ L+ M P+K + +
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 98 -----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM- 151
N L+ + G L LA +FD MP ++ + WN++I + G AL LF+ M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 152 -SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSSLVKF 209
S +P D + +VL ACA +L+ G HA ++ + +++ D ++ +SL++
Sbjct: 245 RSFEP------DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ 260
Y KCG L A +V +++ D S +A++ G+A G+ EA FD VD+
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 8/254 (3%)
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
L ++ + S+ + A +FD++ + + WN+++ A + E + R ML
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYR-KML 142
Query: 424 DL---KMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
+ DK +F V+ ACA G+QV + + G D ++ L+ Y CG +
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCL 202
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
++ RKVFD M + VSWN+++ G AL LFREM+ S P T +VLSAC
Sbjct: 203 DLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSAC 261
Query: 541 DHTGLVEEGR--NLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
G + G + F K + ++ ++ + ++++Y + G L A + + M + D
Sbjct: 262 AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDL 320
Query: 599 NMWFSVLRGCIAHG 612
W +++ G HG
Sbjct: 321 ASWNAMILGFATHG 334
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 43/212 (20%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
EG+Q+H +K G + N L+ Y GCLD A ++FDEMP+ + SWN++I+A
Sbjct: 169 EGKQVHCQIVKHG-FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 74 LHSGHRNESLRLFHAMP---EKTHY------------------SW--------------- 97
+ G + +L+LF M E Y +W
Sbjct: 228 VRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 98 -----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
N L+ + K G L++A +F M ++ WN +I G++ G +A++ F M
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM- 346
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
+D E V ++ +L AC +N G+Q
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/588 (28%), Positives = 260/588 (44%), Gaps = 78/588 (13%)
Query: 85 LFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKN-GLVWNTIIHGYSKRGHPRK 143
L HA+ LV + + G + A LFD P ++ + N++I Y +
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 144 ALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC 203
+ +L++ + + D T+ +C+ + G Q+H+++
Sbjct: 61 SFALYRDLRKETC--FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWR------------ 106
Query: 204 SSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAV 263
+G C D+ + + +V YA GKM AR FD + V
Sbjct: 107 ------FGFCADM---------------YVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 264 LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
W ++ISGY+ GE A LF +M
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPH--------------------------------- 172
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAK 383
D+V+ +A++D + KS A + F E+ I TMI Y N I+ A+
Sbjct: 173 -----VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAAR 227
Query: 384 WIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN-MLDLKMDKFSFASVISACASK 442
+FD M + L+SWN+++ G +N P E I +F M L D + SV+ A +
Sbjct: 228 KLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTIL 502
L LGE L+ + T+++D Y KCG +E +++FD M + SWN ++
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
GYA NG AL LF M +P IT AV++AC+H GLVEEGR F M+ +
Sbjct: 348 HGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGL 405
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAE 622
N +IEHY CMVDL RAG L EA DLI MPF+ + + S L C + + + +
Sbjct: 406 NAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILK 465
Query: 623 KIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
K ++L+P+N G Y+ L N+ A + W+ V+ +M +K GCS
Sbjct: 466 KAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCS 513
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 138/270 (51%), Gaps = 20/270 (7%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQT-NAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYS 96
L+ Y R G LD A++LFD+MP + +N +++ + SG + RLF M KT +
Sbjct: 150 LISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVIT 209
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM----S 152
W ++ + D+ A LFD+MP +N + WNT+I GY + P++ + LF+ M S
Sbjct: 210 WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTS 269
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
LDP D + +VL A +D AL+ G+ H V+ +L+ +C++++ Y K
Sbjct: 270 LDP------DDVTILSVLPAISDTGALSLGEWCHC--FVQRKKLDKKVKVCTAILDMYSK 321
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF-----DSRVDQCAVLWNS 267
CG+++ A R+ + E S +A++ GYA G R A +F + + D+ +L +
Sbjct: 322 CGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITML--A 379
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDV 297
+I+ G E F MR G++ +
Sbjct: 380 VITACNHGGLVEEGRKWFHVMREMGLNAKI 409
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 243/482 (50%), Gaps = 47/482 (9%)
Query: 235 SALVSGYANAGKMREARRVFDSR----VDQCAVLWNSIISGYVLNGEEMEALALFKRMRR 290
+ LV+ Y GK+ +AR+VFD + C V+ I NG E+L F+ M +
Sbjct: 55 AKLVTFYVECGKVLDARKVFDEMPKRDISGCVVM----IGACARNGYYQESLDFFREMYK 110
Query: 291 HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
G+ D V ++L A +LL E K +H K D + S+L+D YSK
Sbjct: 111 DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGN 170
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS-------------------- 390
A K F +L D ++ N MI+ Y+N + ++A + M
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Query: 391 -------------------SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
++SW SI+ GL N +A D F +M L + +
Sbjct: 231 MRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI 491
+++ AC + + ++ G+++ G ++ GLE + ++L+D Y KCGF+ +F
Sbjct: 291 IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN 551
K V++N+++ YA +G +A+ LF +M +G + +TFTA+L+AC H GL + G+N
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQN 410
Query: 552 LFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAH 611
LF M++ Y I P +EHY+CMVDL RAG L EA ++I+ M + D +W ++L C H
Sbjct: 411 LFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNH 470
Query: 612 GNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
GN + ++AA+ + +L+PEN G + L+++ A + WE ++++++ K ++ G SW
Sbjct: 471 GNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSW 530
Query: 672 AD 673
+
Sbjct: 531 VE 532
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 213/521 (40%), Gaps = 112/521 (21%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
LV+ + + G + A +FD MP ++ +I ++ G+ +++L F+ M D L++
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKL- 115
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
DA ++ ++L A + GK +H V+ E D + SSL+ Y K G++ +A
Sbjct: 116 --DAFIVPSLLKASRNLLDREFGKMIHCLVL--KFSYESDAFIVSSLIDMYSKFGEVGNA 171
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGK--------------------------------M 247
+V + E D +A++SGYAN + M
Sbjct: 172 RKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM 231
Query: 248 REARRVFDSRVDQC-------AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTV 300
R +V + C V W SIISG V N + +A FK+M HG+ + +T+
Sbjct: 232 RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATI 291
Query: 301 ANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA 360
+L A +L ++ K++H ++ G+ V SALLD Y K EA F +
Sbjct: 292 ITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPK 351
Query: 361 YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
T+ N+MI Y+N G +A+++F +M
Sbjct: 352 KTTVTFNSMIFCYANHG-------------------------------LADKAVELFDQM 380
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
K+D +F ++++AC+ +LG+ +F + ++ + I L + C
Sbjct: 381 EATGEKLDHLTFTAILTACSHAGLTDLGQNLF-----LLMQNKYRIVPRLEHYACMVD-- 433
Query: 481 EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
L+G A G EA + + MR + P + A+L+AC
Sbjct: 434 ---------------------LLGRA--GKLVEAYEMIKAMR---MEPDLFVWGALLAAC 467
Query: 541 DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV-DLYARAG 580
+ G +E R KH + PE ++ LYA AG
Sbjct: 468 RNHGNMELAR---IAAKHLAELEPENSGNGLLLTSLYANAG 505
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 48/304 (15%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+ +H LK + + ++ L+ YS+ G + +A ++F ++ + + +N +I +
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSS-LIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYA 194
Query: 75 HSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG----- 125
++ +E+L L M + +WN L+S F+ + + + + M C +G
Sbjct: 195 NNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM-CLDGYKPDV 253
Query: 126 LVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQV 185
+ W +II G KA FK M L + ++ + T+L AC + GK++
Sbjct: 254 VSWTSIISGLVHNFQNEKAFDAFKQMLTHGL---YPNSATIITLLPACTTLAYMKHGKEI 310
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAG 245
H +V G+E D F SAL+ Y G
Sbjct: 311 HGYSVVTGLE---------------------DHG------------FVRSALLDMYGKCG 337
Query: 246 KMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
+ EA +F + V +NS+I Y +G +A+ LF +M G D T IL+
Sbjct: 338 FISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 306 AGCS 309
A CS
Sbjct: 398 A-CS 400
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
S+ +I A G + +T G+ I+ LV FY +CG V RKVFD M
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 491 IKTDEVSWNTILMGY-ATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
K D +S +++G A NGY E+L FREM G++ A ++L A
Sbjct: 78 PKRD-ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA---------S 127
Query: 550 RNLFD----------TMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQ 595
RNL D +K +Y + I S ++D+Y++ G +G A + ++ Q
Sbjct: 128 RNLLDREFGKMIHCLVLKFSYESDAFI--VSSLIDMYSKFGEVGNARKVFSDLGEQ 181
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 271/578 (46%), Gaps = 68/578 (11%)
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
S + LV A K GD+ A +FD M ++ + WN++I K ++A+ +++ M +
Sbjct: 101 SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNN 160
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
V D L++V A +D ++ H ++ G+E
Sbjct: 161 ---VLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLE-------------------- 197
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLN 275
V+ V F SALV Y GK REA+ V D ++ VL ++I GY
Sbjct: 198 ------VSNV------FVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 276 GEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVA 335
GE+ EA+ F+ M V + T A++L + +L + K +H K G +
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
++LL T+Y C ++D+ +F + +
Sbjct: 306 TSLL-------------------------------TMYLRCSLVDDSLRVFKCIEYPNQV 334
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
SW S++ GL +N A+ F +M +K + F+ +S + C++ + E G Q+ G
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV 394
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
G + D + L+D Y KCG ++ R VFD + + D +S NT++ YA NG+G EAL
Sbjct: 395 TKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREAL 454
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDL 575
LF M G++P+ +T +VL AC+++ LVEEG LFD+ + + I +HY+CMVDL
Sbjct: 455 DLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDL 513
Query: 576 YARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAY 635
RAG L EA L E+ D +W ++L C H + + KI++++P + G
Sbjct: 514 LGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTL 572
Query: 636 IQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
I +SN+ A++ W +++ M D ++K P SW +
Sbjct: 573 ILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVE 610
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 166/657 (25%), Positives = 297/657 (45%), Gaps = 103/657 (15%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
+ +H L+ G + ++ NR LQ Y + G + +A QLFD++P N +WN ++
Sbjct: 23 AKIVHAQLLEAGFVRTTYW-GNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 75 HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHG 134
+G+ N +L LF MPE+ SWN ++S G H
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCG-----------------------FHE 118
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI 194
Y R + + P E ++L + C + G+Q+H I G+
Sbjct: 119 YGIR-----VFFDMQRWEIRPTEFTF-------SILASLVTC--VRHGEQIHGNAICSGV 164
Query: 195 ELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
++ V+ +S++ Y + G V D++LS VF
Sbjct: 165 S-RYNLVVWNSVMDMYRRLG--------------VFDYALS-----------------VF 192
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVE 314
+ D+ V WN +I +G + AL F MR + D TV+ ++S L +
Sbjct: 193 LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 315 LVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYS 374
KQ A K+G + +V A +D +SK ++ K F EL+ +D++L N+MI YS
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 375 NCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFAS 434
W + C +A+ +F ++ DKF+F+S
Sbjct: 313 ---------W----------------------HCCGEDALRLFILAMTQSVRPDKFTFSS 341
Query: 435 VISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTD 494
V+S+ + L+ G V I +G + D ++TSL++ Y K G V++ VF D
Sbjct: 342 VLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKD 400
Query: 495 EVSWNTILMGYATNGYGSEALTLFREMRCS-GVRPSAITFTAVLSACDHTGLVEEGRNLF 553
+ WNT++MG A N E+L +F ++ + ++P +T +L AC + G V EG +F
Sbjct: 401 LIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIF 460
Query: 554 DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGN 613
+M+ + +NP EHY+C+++L R G + EA D+ +++PF+ +++W +L + G+
Sbjct: 461 SSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGD 520
Query: 614 RTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+ + A+ +++ +P++ Y+ L + + WE S ++R M + ++ G S
Sbjct: 521 TRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSS 577
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/513 (22%), Positives = 220/513 (42%), Gaps = 80/513 (15%)
Query: 7 GIGRTLREGRQLHVSFLKTG-----------ILNSSLTTANRLLQFYSRRGCLDDATQLF 55
G RT G + + K+G I + + T N L+ + G L++A LF
Sbjct: 34 GFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLF 93
Query: 56 DEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFA--KSGD 109
DEMP+ + SWNT+I + G +R+F M T +++++L S + G+
Sbjct: 94 DEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGE 153
Query: 110 LQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATV 169
+++ + N +VWN+++ Y + G ALS+F TM D V++
Sbjct: 154 QIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME---------DRDVVS-- 202
Query: 170 LGACADCFALNCGKQVHARV------IVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVA 223
+C L+C + V ++ +E++ D+ S +V +L +
Sbjct: 203 ----WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 224 GVVKEVDDFS----LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
+ ++ S L A + ++ ++ ++ ++F +VL NS+I Y +
Sbjct: 259 ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE 318
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+AL LF V D T +++LS+ + ++++ +H+ K+G D VA++L+
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLM 377
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
+ Y K+ G ++ A +F K LI WN+
Sbjct: 378 EMYFKT-------------------------------GSVDLAMGVFAKTDGKDLIFWNT 406
Query: 400 ILVGLAKNACPSEAIDIFCRMNM-LDLKMDKFSFASVISACASKSCLELGEQVFG---KA 455
+++GLA+N+ E++ IF ++ M LK D+ + ++ AC + G Q+F KA
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKA 466
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFD 488
V +H +++ C+ G + + + D
Sbjct: 467 HGVNPGNEHY--ACIIELLCRVGMINEAKDIAD 497
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 7/280 (2%)
Query: 315 LVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYS 374
L K +HA + G + L Y KS A + F ++ +TI N +
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 375 NCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFAS 434
G + +A +FD M + ++SWN+++ GL I +F M +++ +F+F+
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 435 VISACASKSCLELGEQVFGKAITVGL-EFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT 493
+ S +C+ GEQ+ G AI G+ ++ ++ S++D Y + G + VF M
Sbjct: 142 LASLV---TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 494 DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN-L 552
D VSWN +++ + +G AL F MR ++P T + V+S C + +G+ L
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 553 FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+K + N + +D++++ L +++ L E+
Sbjct: 259 ALCIKMGFLSNSIV--LGAGIDMFSKCNRLDDSVKLFREL 296
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 266/559 (47%), Gaps = 56/559 (10%)
Query: 123 KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCG 182
++ +WN +I +S PR+AL L M + V D L+ VL AC+ + G
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENG---VSVDKFSLSLVLKACSRLGFVKGG 140
Query: 183 KQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYA 242
Q+H + G L D L + L+ Y KCG L + ++ + + D S ++++ GY
Sbjct: 141 MQIHGFLKKTG--LWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYV 198
Query: 243 NAGKMREARRVFDSRVDQCAVL--WNSIISGYVLNGEEME-ALALFKRMRRHGVSGDVST 299
G + AR +FD + L WNS+ISGY + ++ A LF M
Sbjct: 199 KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK-------- 250
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
D++ ++++D Y K +A F +
Sbjct: 251 -------------------------------DLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
D + TMI Y+ G + AK +FD M + ++++NS++ G +N EA++IF
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 339
Query: 420 MNMLD-LKMDKFSFASVISACAS----KSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
M L D + V+ A A +++ + K +G + + +L+D Y
Sbjct: 340 MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK----LGVALIDMY 395
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
KCG ++ VF+G+ WN ++ G A +G G A + ++ ++P ITF
Sbjct: 396 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFV 455
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPF 594
VL+AC H+GLV+EG F+ M+ + I P ++HY CMVD+ +R+G + A +LIEEMP
Sbjct: 456 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPV 515
Query: 595 QADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQV 654
+ + +W + L C H G++ A+ +I NP +Y+ LSN+ A+ W+ +V
Sbjct: 516 EPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRV 575
Query: 655 RELMIDKNVQKIPGCSWAD 673
R +M ++ ++KIPGCSW +
Sbjct: 576 RTMMKERKIEKIPGCSWIE 594
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 234/558 (41%), Gaps = 103/558 (18%)
Query: 2 SMELQGIGRTLREGRQLHVSFLKTGIL-NSSLTTANRLLQFYSRRGCLDD-ATQLFDEM- 58
++ + G +T + Q+H +KTGI+ NS+LTT L SRR L D A +F E
Sbjct: 15 TIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 74
Query: 59 -------PQTNAFSWNTLIEAHLHSGHRNE------------------SLRL-------- 85
+ F WN +I++H H + SL L
Sbjct: 75 VCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL 134
Query: 86 --------FHAMPEKTH-----YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTII 132
H +KT + N L+ + K G L L+ +FD MP ++ + +N++I
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 133 HGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE 192
GY K G A LF M ++ ++ + + + G ++ ++ A +
Sbjct: 195 DGYVKCGLIVSARELFDLMPMEMKNLISWN----SMISGYAQTSDGVDIASKLFADMP-- 248
Query: 193 GIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARR 252
E D + +S++ Y K G ++ A + V+ D + + ++ GYA G + A+
Sbjct: 249 ----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 304
Query: 253 VFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTVANILSAGCSLL 311
+FD + V +NS+++GYV N MEAL +F M + + D +T+ +L A L
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMIT 371
+ MH + + + AL+D YSK
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSK--------------------------- 397
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
CG I+ A +F+ + +K++ WN+++ GLA + A D+ ++ L LK D +
Sbjct: 398 ----CGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 432 FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL------VDFYCKCGFVEIGRK 485
F V++AC+ ++ G F + H I L VD + G +E+ +
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFEL-----MRRKHKIEPRLQHYGCMVDILSRSGSIELAKN 508
Query: 486 VFDGM-IKTDEVSWNTIL 502
+ + M ++ ++V W T L
Sbjct: 509 LIEEMPVEPNDVIWRTFL 526
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 58/368 (15%)
Query: 1 MSMELQGIGRT--LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEM 58
+S+ L+ R ++ G Q+H FLK L S L N L+ Y + GCL + Q+FD M
Sbjct: 124 LSLVLKACSRLGFVKGGMQIH-GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRM 182
Query: 59 PQTNAFSWNTLIEAHLHSGHRNESLRLFHAMP--EKTHYSWNMLVSAFAKSGD-LQLAHS 115
P+ ++ S+N++I+ ++ G + LF MP K SWN ++S +A++ D + +A
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASK 242
Query: 116 LFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA- 174
LF MP K+ + WN++I GY K G A LF M D AT++ A
Sbjct: 243 LFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-------RRDVVTWATMIDGYAK 295
Query: 175 -----------------DCFALNC--GKQVHARVIVEGIELEFDKVLCSSL--------- 206
D A N V + +E +E+ D S L
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 207 -VKFYGKCGDLDSAARVAGVVKEVDDFSLS-----ALVSGYANAGKMREARRVFDSRVDQ 260
+ + G L A + + E F L AL+ Y+ G ++ A VF+ ++
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVE-KQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 414
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS--------LLV 312
WN++I G ++G A + ++ R + D T +L+A CS LL
Sbjct: 415 SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNA-CSHSGLVKEGLLC 473
Query: 313 VELVKQMH 320
EL+++ H
Sbjct: 474 FELMRRKH 481
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 56/324 (17%)
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
V Q+H K G+ + + + ++ A++ S+ P+ L + + + +
Sbjct: 28 VNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPY--------LADFARCVFHEYHVCSFS 79
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
G +ED WN+++ + P +A+ + C M + +DKFS + V
Sbjct: 80 FGEVEDP------------FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLV 127
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE 495
+ AC+ ++ G Q+ G GL D + L+ Y KCG + + R++FD M K D
Sbjct: 128 LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS 187
Query: 496 VSWNTILMGYATNGYGSEALTLF----REMR--------CSGVRPSA------------- 530
VS+N+++ GY G A LF EM+ SG ++
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Query: 531 -----ITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
I++ +++ G +E+ + LFD M ++ ++ M+D YA+ G + A
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-----DVVTWATMIDGYAKLGFVHHA 302
Query: 586 IDLIEEMPFQADANMWFSVLRGCI 609
L ++MP + D + S++ G +
Sbjct: 303 KTLFDQMPHR-DVVAYNSMMAGYV 325
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 237/480 (49%), Gaps = 37/480 (7%)
Query: 197 EFDKVLCSSLVKFYGKCGDLDSAARVAG--VVKEVDDFSLSALVSGY----ANAGKMREA 250
+ D V + + KC L ++ + ++D S A + + M A
Sbjct: 23 KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYA 82
Query: 251 RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
R +F++ + V++NS+ GY +E +LF + G+ D T ++L A
Sbjct: 83 RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA 142
Query: 311 LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMI 370
+E +Q+H + K+G+ ++ V T+I
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCP-------------------------------TLI 171
Query: 371 TVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
+Y+ C ++ A+ +FD + ++ +N+++ G A+ P+EA+ +F M LK ++
Sbjct: 172 NMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEI 231
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
+ SV+S+CA L+LG+ + A ++T+L+D + KCG ++ +F+ M
Sbjct: 232 TLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR 550
D +W+ +++ YA +G +++ +F MR V+P ITF +L+AC HTG VEEGR
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351
Query: 551 NLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIA 610
F M + I P I+HY MVDL +RAG L +A + I+++P +W +L C +
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSS 411
Query: 611 HGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
H N + + +E+I +LD + G Y+ LSN+ A ++ WE +R++M D+ K+PGCS
Sbjct: 412 HNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 179/399 (44%), Gaps = 77/399 (19%)
Query: 110 LQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATV 169
+ A LF++M + +++N++ GYS+ +P + SLF + D + D ++
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG---ILPDNYTFPSL 135
Query: 170 LGACADCFALNCGKQVHARVIVEGIELEFDKV-LCSSLVKFYGKCGDLDSAARVAGVVKE 228
L ACA AL G+Q+H + G++ D V +C +L+ Y +C D+DS
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLD---DNVYVCPTLINMYTECEDVDS---------- 182
Query: 229 VDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
AR VFD V+ C V +N++I+GY EAL+LF+ M
Sbjct: 183 ---------------------ARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 221
Query: 289 RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
+ + + T+ ++LS+ L ++L K +H +A K + V +AL+D ++K
Sbjct: 222 QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSL 281
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
+A F +++ DT + MI Y+N G+ E + +F+ M S+
Sbjct: 282 DDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE---------------- 325
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIST 468
+++ D+ +F +++AC+ +E G + F + ++ +F + S
Sbjct: 326 ---------------NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVS---KFGIVPSI 367
Query: 469 ----SLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
S+VD + G +E + D + I + W +L
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 49/279 (17%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSM--PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
Y L++ + + D+ A +FD + PC + +N +I GY++R P +ALSLF+ M
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCV--VCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 153 ---LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
L P E+ L +VL +CA +L+ GK +H ++ KV ++L+
Sbjct: 223 GKYLKPNEI------TLLSVLSSCALLGSLDLGKWIHKYAKKHSF-CKYVKV-NTALIDM 274
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
+ KCG LD A + ++ D + SA++ YAN GK
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE--------------------- 313
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL--VVELVKQMHAHACKIG 327
+++ +F+RMR V D T +L+A CS V E K K G
Sbjct: 314 ----------KSMLMFERMRSENVQPDEITFLGLLNA-CSHTGRVEEGRKYFSQMVSKFG 362
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
+ I +++D S++ +A +F +L T +L
Sbjct: 363 IVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPML 401
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 244/508 (48%), Gaps = 44/508 (8%)
Query: 170 LGACADCFALNCGKQVHARVIVEGIELEFDKVLC----SSLVKFYGKCGDLDSAARVAGV 225
L CA L K +HA ++ GI V C ++LV YGKCG A +V
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGI------VQCCPLANTLVNVYGKCGAASHALQVFDE 63
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
+ D + +++++ A +SG L+ +
Sbjct: 64 MPHRDHIAWASVLTALNQAN-----------------------LSGKTLSVFSSVGSSSG 100
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
R S V AN+ S ++ +Q+H H +D VV S+L+D Y+K
Sbjct: 101 LRPDDFVFSALVKACANLGS-------IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKC 153
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
+ A F ++ +TI M++ Y+ GR E+A +F + K L SW +++ G
Sbjct: 154 GLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFV 213
Query: 406 KNACPSEAIDIFCRMNM--LDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFD 463
++ EA +F M +D+ +D +S++ ACA+ + G QV G I +G +
Sbjct: 214 QSGKGLEAFSVFTEMRRERVDI-LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSC 272
Query: 464 HIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRC 523
IS +L+D Y KC V + +F M D VSW ++++G A +G +AL L+ +M
Sbjct: 273 VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVS 332
Query: 524 SGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLG 583
GV+P+ +TF ++ AC H G VE+GR LF +M +Y I P ++HY+C++DL R+G L
Sbjct: 333 HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLD 392
Query: 584 EAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKII-QLDPENPGAYIQLSNVL 642
EA +LI MPF D W ++L C G +G A+ ++ ++P YI LSN+
Sbjct: 393 EAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIY 452
Query: 643 ATSEDWEGSAQVRELMIDKNVQKIPGCS 670
A++ W ++ R + + V+K PG S
Sbjct: 453 ASASLWGKVSEARRKLGEMEVRKDPGHS 480
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 226/509 (44%), Gaps = 83/509 (16%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N LV+ + K G A +FD MP ++ + W +++ ++ K +L S+
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGK--TLSVFSSVGSSS 99
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
+ D V + ++ ACA+ +++ G+QVH IV E D+V+ SSLV Y KCG L+
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS--EYANDEVVKSSLVDMYAKCGLLN 157
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
SA V ++ + S +A+VSGYA +G+ EA +F + W ++ISG+V +G+
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV-KQMHAHACKIGVTHDIVVAS 336
+EA ++F MRR V V + + C+ L + +Q+H +G + +++
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISN 277
Query: 337 ALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS 396
AL+D Y+K C + AK IF M + ++S
Sbjct: 278 ALIDMYAK-------------------------------CSDVIAAKDIFSRMRHRDVVS 306
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
W S++VG+A++ +A+ ++ M +K ++ +F +I AC+
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS---------------- 350
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-----IKTDEVSWNTILMGYATNGYG 511
H+ GFVE GR++F M I+ + +L +G
Sbjct: 351 -------HV------------GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
EA L M P T+ A+LSAC G + G + D + ++ + + Y
Sbjct: 392 DEAENLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK-DPSTYIL 447
Query: 572 MVDLYARA---GCLGEAIDLIEEMPFQAD 597
+ ++YA A G + EA + EM + D
Sbjct: 448 LSNIYASASLWGKVSEARRKLGEMEVRKD 476
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 40/252 (15%)
Query: 11 TLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLI 70
++ GRQ+H F+ + N + ++ L+ Y++ G L+ A +FD + N S
Sbjct: 120 SIDHGRQVHCHFIVSEYANDEVVKSS-LVDMYAKCGLLNSAKAVFDSIRVKNTIS----- 173
Query: 71 EAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNT 130
W +VS +AKSG + A LF +P KN W
Sbjct: 174 --------------------------WTAMVSGYAKSGRKEEALELFRILPVKNLYSWTA 207
Query: 131 IIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVI 190
+I G+ + G +A S+F M + ++++ D VL++++GACA+ A G+QVH VI
Sbjct: 208 LISGFVQSGKGLEAFSVFTEMRRERVDIL--DPLVLSSIVGACANLAASIAGRQVHGLVI 265
Query: 191 VEGIELEFDK--VLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMR 248
G FD + ++L+ Y KC D+ +A + ++ D S ++L+ G A G+
Sbjct: 266 ALG----FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 321
Query: 249 EARRVFDSRVDQ 260
+A ++D V
Sbjct: 322 KALALYDDMVSH 333
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 226/430 (52%), Gaps = 31/430 (7%)
Query: 245 GKMREARRVFDS-RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANI 303
G + A+ +FD D WN +I G+ + + ++ + RM VS ++
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSR-----PDL 107
Query: 304 LSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT 363
+ +L E +K + K H V+ S LD D
Sbjct: 108 FTFNFALKSCERIKSIP----KCLEIHGSVIRSGFLD---------------------DA 142
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
I+ +++ YS G +E A +FD M + L+SWN ++ + ++A+ ++ RM
Sbjct: 143 IVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNE 202
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
+ D ++ +++S+CA S L +G + A + E +S +L+D Y KCG +E
Sbjct: 203 GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENA 262
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
VF+GM K D ++WN++++GY +G+G EA++ FR+M SGVRP+AITF +L C H
Sbjct: 263 IGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQ 322
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFS 603
GLV+EG F+ M +++ P ++HY CMVDLY RAG L ++++I D +W +
Sbjct: 323 GLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRT 382
Query: 604 VLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNV 663
+L C H N +G++A +K++QL+ N G Y+ ++++ + + D + A +R+L+ ++
Sbjct: 383 LLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDL 442
Query: 664 QKIPGCSWAD 673
Q +PG SW +
Sbjct: 443 QTVPGWSWIE 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 162/386 (41%), Gaps = 84/386 (21%)
Query: 5 LQGIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQF--YSRRGCLDDATQLFDEMPQTN 62
LQG ++++ R++H + G L + N LL+F S G L A LFD
Sbjct: 12 LQGCN-SMKKLRKIHSHVIING-LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDP 69
Query: 63 AFS-WNTLIEAHLHSGHRNESLRLFHAM-------PEKTHYSWNM--------------- 99
+ S WN LI +S S+ ++ M P+ +++ +
Sbjct: 70 STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEI 129
Query: 100 ------------------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHP 141
LV ++ +G +++A +FD MP ++ + WN +I +S G
Sbjct: 130 HGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLH 189
Query: 142 RKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
+ALS++K M E V D+ L +L +CA ALN G +H I I E
Sbjct: 190 NQALSMYKRMGN---EGVCGDSYTLVALLSSCAHVSALNMGVMLHR--IACDIRCESCVF 244
Query: 202 LCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC 261
+ ++L+ Y KCG L++A V +++ D
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRD------------------------------- 273
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL--LVVELVKQM 319
+ WNS+I GY ++G +EA++ F++M GV + T +L GCS LV E V+
Sbjct: 274 VLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL-LGCSHQGLVKEGVEHF 332
Query: 320 HAHACKIGVTHDIVVASALLDAYSKS 345
+ + +T ++ ++D Y ++
Sbjct: 333 EIMSSQFHLTPNVKHYGCMVDLYGRA 358
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 157/396 (39%), Gaps = 74/396 (18%)
Query: 111 QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
QL FDS P + WN +I G+S P ++ + M L + D L
Sbjct: 59 QLLFDHFDSDPSTSD--WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRP--DLFTFNFAL 114
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVD 230
+C ++ ++H VI G L+ D ++ +SLV+ Y G ++ A++V D
Sbjct: 115 KSCERIKSIPKCLEIHGSVIRSGF-LD-DAIVATSLVRCYSANGSVEIASKV------FD 166
Query: 231 DFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR 290
+ + LVS WN +I + G +AL+++KRM
Sbjct: 167 EMPVRDLVS-------------------------WNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 291 HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
GV GD T+ +LS+ + + + +H AC I + V++AL+D Y+K
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
A F ++ D +++WNS+++G +
Sbjct: 262 AIGVFNGMRKRD-------------------------------VLTWNSMIIGYGVHGHG 290
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF---GKAITVGLEFDHIIS 467
EAI F +M ++ + +F ++ C+ + ++ G + F + H
Sbjct: 291 VEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHY-- 348
Query: 468 TSLVDFYCKCGFVEIGRK-VFDGMIKTDEVSWNTIL 502
+VD Y + G +E + ++ D V W T+L
Sbjct: 349 GCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 187/313 (59%), Gaps = 2/313 (0%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
D L ++++ +Y + G +E+A +F+ M + ++SW +++ G A+ + ++ +M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
+ ++F +++SAC L G V + + +GL+ IS SL+ YCKCG ++
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 482 IGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR-EMRCSGVRPSAITFTAVLSAC 540
++FD D VSWN+++ GYA +G +A+ LF M SG +P AIT+ VLS+C
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 541 DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM 600
H GLV+EGR F+ M + + PE+ HYSC+VDL R G L EA++LIE MP + ++ +
Sbjct: 334 RHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVI 392
Query: 601 WFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMID 660
W S+L C HG+ G AAE+ + L+P+ ++QL+N+ A+ W+ +A VR+LM D
Sbjct: 393 WGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKD 452
Query: 661 KNVQKIPGCSWAD 673
K ++ PGCSW +
Sbjct: 453 KGLKTNPGCSWIE 465
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 46/253 (18%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
G+ R R G H LK G + S + + L+ Y G +++A ++F+EMP+ N SW
Sbjct: 131 GLNRDFRTGSGFHCLALKGGFI-SDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSW 189
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKT--------------------------------- 93
+I + L+L+ M + T
Sbjct: 190 TAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLH 249
Query: 94 -------HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALS 146
H S N L+S + K GDL+ A +FD K+ + WN++I GY++ G +A+
Sbjct: 250 MGLKSYLHIS-NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIE 308
Query: 147 LFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
LF+ M P DA VL +C + G++ + G++ E + C L
Sbjct: 309 LFELMM--PKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSC--L 364
Query: 207 VKFYGKCGDLDSA 219
V G+ G L A
Sbjct: 365 VDLLGRFGLLQEA 377
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
D + +S + +C G A+ G D + +SLV Y G VE KV
Sbjct: 118 FDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 487 FDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLV 546
F+ M + + VSW ++ G+A L L+ +MR S P+ TFTA+LSAC +G +
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 547 EEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLR 606
+GR++ H + + + ++ +Y + G L +A + ++ D W S++
Sbjct: 238 GQGRSVHCQTLH-MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMIA 295
Query: 607 GCIAHG 612
G HG
Sbjct: 296 GYAQHG 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 43/211 (20%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPL 156
LV + SG+++ A+ +F+ MP +N + W +I G+++ L L+ M + DP
Sbjct: 161 LVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPN 220
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
+ +L AC AL G+ VH + + G++ + +SL+ Y KCGDL
Sbjct: 221 DYT------FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH--ISNSLISMYCKCGDL 272
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
A R+ D FS +VS WNS+I+GY +G
Sbjct: 273 KDAFRI------FDQFSNKDVVS-------------------------WNSMIAGYAQHG 301
Query: 277 EEMEALALFK-RMRRHGVSGDVSTVANILSA 306
M+A+ LF+ M + G D T +LS+
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 115/276 (41%), Gaps = 31/276 (11%)
Query: 235 SALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
S+LV Y ++G++ A +VF+ ++ V W ++ISG+ L L+ +MR+
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 295 GDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF 354
+ T +LSA + + +H +G+ + ++++L+ Y K +A +
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
F + D + N+MI Y+ G A +F+ M K+
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS--------------------- 317
Query: 415 DIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
K D ++ V+S+C ++ G + F GL+ + + LVD
Sbjct: 318 ---------GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLL 368
Query: 475 CKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNG 509
+ G ++ ++ + M +K + V W ++L +G
Sbjct: 369 GRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 224/447 (50%), Gaps = 39/447 (8%)
Query: 230 DDFSLSALV--SGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
D F +S LV S + A + AR + D WN + GY + +E++ ++
Sbjct: 44 DSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSE 103
Query: 288 MRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQG 347
M+R G+ + T +L A S L + +Q+ K G D+ V
Sbjct: 104 MKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVG------------ 151
Query: 348 PHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKN 407
N +I +Y C + DA+ +FD M+ + ++SWNSI+ L +N
Sbjct: 152 -------------------NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 408 ACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIS 467
+ + FC M D+ + ++SAC L LG+ V + + LE + +
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLG 250
Query: 468 TSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLF-REMRCSGV 526
T+LVD Y K G +E R VF+ M+ + +W+ +++G A G+ EAL LF + M+ S V
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
RP+ +TF VL AC HTGLV++G F M+ + I P + HY MVD+ RAG L EA
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Query: 587 DLIEEMPFQADANMWFSVLRGCIAH---GNRTIGKMAAEKIIQLDPENPGAYIQLSNVLA 643
D I++MPF+ DA +W ++L C H + IG+ +++I+L+P+ G + ++N A
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFA 430
Query: 644 TSEDWEGSAQVRELMIDKNVQKIPGCS 670
+ W +A+VR +M + ++KI G S
Sbjct: 431 EARMWAEAAEVRRVMKETKMKKIAGES 457
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 169/410 (41%), Gaps = 82/410 (20%)
Query: 101 VSAFAKSGDLQLAHSLF----DSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
VS+ + + DL A +L DS P WN + GYS P +++ ++ M +
Sbjct: 54 VSSLSLAKDLAFARTLLLHSSDSTPS----TWNMLSRGYSSSDSPVESIWVYSEMKRRGI 109
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
+ + +L ACA L G+Q+ V+ G +FD + ++L+ YG C
Sbjct: 110 K---PNKLTFPFLLKACASFLGLTAGRQIQVEVLKHG--FDFDVYVGNNLIHLYGTC--- 161
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNG 276
K +AR+VFD ++ V WNSI++ V NG
Sbjct: 162 ----------------------------KKTSDARKVFDEMTERNVVSWNSIMTALVENG 193
Query: 277 EEMEALALFKRMRRHGVSGDVSTVANILSA-GCSLLVVELVKQMHAHACKIGVTHDIVVA 335
+ F M D +T+ +LSA G +L + +LV H+ + + +
Sbjct: 194 KLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLV---HSQVMVRELELNCRLG 250
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
+AL+D Y+KS G +E A+ +F+ M K +
Sbjct: 251 TALVDMYAKSGG-------------------------------LEYARLVFERMVDKNVW 279
Query: 396 SWNSILVGLAKNACPSEAIDIFCR-MNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
+W++++VGLA+ EA+ +F + M ++ + +F V+ AC+ ++ G + F +
Sbjct: 280 TWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHE 339
Query: 455 AITV-GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
+ ++ I ++VD + G + M + D V W T+L
Sbjct: 340 MEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLL 389
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 38/177 (21%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L GRQ+ V LK G + + N L+ Y DA ++FDEM + N SWN+++
Sbjct: 129 LTAGRQIQVEVLKHG-FDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
Query: 72 AHLHSGHRNESLRLFHAM------PEKTH------------------YSWNM-------- 99
A + +G N F M P++T +S M
Sbjct: 188 ALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNC 247
Query: 100 -----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
LV +AKSG L+ A +F+ M KN W+ +I G ++ G +AL LF M
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM 304
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 186/453 (41%), Gaps = 77/453 (16%)
Query: 20 VSFLKTGILNSSLTTA---NRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEA 72
++F +T +L+SS +T N L + YS ++ ++ EM + N ++ L++A
Sbjct: 63 LAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 73 -----HLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV 127
L +G + + L H Y N L+ + A +FD M +N +
Sbjct: 123 CASFLGLTAGRQIQVEVLKHGFDFDV-YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHC-DAGVLATVLGACADCFALNCGKQVH 186
WN+I+ + G F M + C D + +L AC +L GK VH
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEM----IGKRFCPDETTMVVLLSACGGNLSL--GKLVH 235
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
++V+V ELE + L ++LV Y K G L+
Sbjct: 236 SQVMVR--ELELNCRLGTALVDMYAKSGGLEY---------------------------- 265
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF-KRMRRHGVSGDVSTVANILS 305
AR VF+ VD+ W+++I G G EAL LF K M+ V + T +L
Sbjct: 266 ---ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLC 322
Query: 306 AGCSL--LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK-AYD 362
A CS LV + K H + ++ A++D ++ +EA F ++ D
Sbjct: 323 A-CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPD 381
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSKTL-----ISWNSILVG--LAKNACPSEAID 415
++ T+++ S ED + I + + + + S N ++V A+ +EA +
Sbjct: 382 AVVWRTLLSACS-IHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAE 440
Query: 416 IFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
+ R M + KM K A +SCLELG
Sbjct: 441 V--RRVMKETKMKKI---------AGESCLELG 462
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 229/454 (50%), Gaps = 36/454 (7%)
Query: 225 VVKEVD---DFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEA 281
VVK V F LV Y G A ++FD ++ V WNS+ISGY G +
Sbjct: 57 VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKC 116
Query: 282 LALFKRM--RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+ RM G + T +++SA E + +H K GV ++ V +A +
Sbjct: 117 FEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFI 176
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
+ Y K+ +CK +F+ +S K L+SWN+
Sbjct: 177 NWYGKTGDLTSSCK-------------------------------LFEDLSIKNLVSWNT 205
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
++V +N + + F + + D+ +F +V+ +C + L + + G + G
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
+ I+T+L+D Y K G +E VF + D ++W +L YAT+G+G +A+ F
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
M G+ P +TFT +L+AC H+GLVEEG++ F+TM Y I+P ++HYSCMVDL R+
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G L +A LI+EMP + + +W ++L C + + +G AAE++ +L+P + Y+ LS
Sbjct: 386 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 640 NVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
N+ + S W+ ++++R LM K + + GCS+ +
Sbjct: 446 NIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 165/387 (42%), Gaps = 70/387 (18%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
+ LV + + G A LFD MP ++ + WN++I GYS RG+ K + M + +
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
+ L +++ AC + G+ +H V+ G+ LE KV+ ++ + +YGK GDL
Sbjct: 130 FRPNEVTFL-SMISACVYGGSKEEGRCIHGLVMKFGV-LEEVKVV-NAFINWYGKTGDLT 186
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGE 277
S+ ++ +D S+ LVS WN++I ++ NG
Sbjct: 187 SSCKL------FEDLSIKNLVS-------------------------WNTMIVIHLQNGL 215
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASA 337
+ LA F RR G D +T +L + + VV L + +H G + + + +A
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
LLD YSK GR+ED+ +F ++S ++W
Sbjct: 276 LLDLYSK-------------------------------LGRLEDSSTVFHEITSPDSMAW 304
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF---GK 454
++L A + +AI F M + D +F +++AC+ +E G+ F K
Sbjct: 305 TAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVE 481
+ DH + +VD + G ++
Sbjct: 365 RYRIDPRLDHY--SCMVDLLGRSGLLQ 389
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 14/268 (5%)
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
CK + + + ++ Y G A+ +FD M + L+SWNS++ G +
Sbjct: 55 CKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLG 114
Query: 412 EAIDIFCRMNM--LDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
+ ++ RM + + + ++ +F S+ISAC E G + G + G+ + + +
Sbjct: 115 KCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNA 174
Query: 470 LVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS 529
+++Y K G + K+F+ + + VSWNT+++ + NG + L F R G P
Sbjct: 175 FINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPD 234
Query: 530 AITFTAVLSACDHTGLVE-----EGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
TF AVL +C+ G+V G +F N I + ++DLY++ G L +
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT------TALLDLYSKLGRLED 288
Query: 585 AIDLIEEMPFQADANMWFSVLRGCIAHG 612
+ + E+ D+ W ++L HG
Sbjct: 289 SSTVFHEIT-SPDSMAWTAMLAAYATHG 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 170/437 (38%), Gaps = 74/437 (16%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
R LH +K+ ++L+ Y R G A +LFDEMP+ + SWN+LI +
Sbjct: 51 RLLHCKVVKSVSYRHGFI-GDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSG 109
Query: 76 SGHRNESLRLFHAM--------PEKTHY-------------------------------- 95
G+ + + M P + +
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 96 -SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF---KTM 151
N ++ + K+GDL + LF+ + KN + WNT+I + + G K L+ F + +
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRV 229
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
+P D VL +C D + + +H ++ G +K + ++L+ Y
Sbjct: 230 GHEP------DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG--FSGNKCITTALLDLYS 281
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISG 271
K G L+ ++ V + D + +A+++ YA G R+A + F+ V + + +
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMV-HYGISPDHVTFT 340
Query: 272 YVLNGEEMEAL---------ALFKRMRRHGVSGDVSTVANILS-AGCSLLVVELVKQMHA 321
++LN L + KR R S + ++L +G L+K+M
Sbjct: 341 HLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPM 400
Query: 322 HACKIGVTHDIVVASALLDA---YSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGR 378
V ALL A Y +Q +A + EL+ D + +YS G
Sbjct: 401 EPSS-------GVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 379 IEDAKWIFDTMSSKTLI 395
+DA I + M K L+
Sbjct: 454 WKDASRIRNLMKQKGLV 470
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDH-IISTSLVDFYCKCGFVEIGRKVFDGMI 491
+S+I+A S +EL + K + + + H I LV Y + G K+FD M
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVK-SVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREMRCS--GVRPSAITFTAVLSACDHTGLVEEG 549
+ D VSWN+++ GY+ GY + + M S G RP+ +TF +++SAC + G EEG
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 550 RNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQ 595
R + + + + E++ + ++ Y + G L + L E++ +
Sbjct: 154 RCIHGLVM-KFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 105/264 (39%), Gaps = 55/264 (20%)
Query: 9 GRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNT 68
G + EGR +H +K G+L + N + +Y + G L + +LF+++ N SWNT
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEE-VKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNT 205
Query: 69 LIEAHLHSG-------HRNESLRLFHAMPEKTH--------------------------- 94
+I HL +G + N S R+ H + T
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 95 YSWN-----MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
+S N L+ ++K G L+ + ++F + + + W ++ Y+ G R A+ F+
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 150 TM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE-GIELEFDKVLCSS 205
M + P D +L AC+ + GK + I+ D C
Sbjct: 326 LMVHYGISP------DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC-- 377
Query: 206 LVKFYGKCGDLDSAARVAGVVKEV 229
+V G+ G L A G++KE+
Sbjct: 378 MVDLLGRSGLLQDA---YGLIKEM 398
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 233/464 (50%), Gaps = 39/464 (8%)
Query: 244 AGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANI 303
G ++ A ++FD + N ++ G + + + ++L+ M + GVS D T +
Sbjct: 59 PGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFV 118
Query: 304 LSAGCSLL-------------------VVELVKQ----MHAHACKIGVTHDI-------- 332
L A CS L + E VK HA+ +G+ ++
Sbjct: 119 LKA-CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAH 177
Query: 333 -VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS 391
V S++ Y+K EA + F E+ D + N MIT C ++ A+ +FD +
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTE 237
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
K +++WN+++ G P EA+ IF M D + S++SACA LE G+++
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 452 F-----GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYA 506
+++ + I +L+D Y KCG ++ +VF G+ D +WNT+++G A
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357
Query: 507 TNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEI 566
+ + ++ +F EM+ V P+ +TF V+ AC H+G V+EGR F M+ YNI P I
Sbjct: 358 LH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 567 EHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQ 626
+HY CMVD+ RAG L EA +E M + +A +W ++L C +GN +GK A EK++
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 627 LDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+ + G Y+ LSN+ A++ W+G +VR++ D V+K G S
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 207/481 (43%), Gaps = 98/481 (20%)
Query: 102 SAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHC 161
++ + G L+ AH LFD +P + + N ++ G ++ P K +SL+ M V
Sbjct: 54 ASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEK---RGVSP 110
Query: 162 DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAAR 221
D VL AC+ + G H +V+ G L ++ + ++L+ F+ CGDL A+
Sbjct: 111 DRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL--NEYVKNALILFHANCGDLGIASE 168
Query: 222 VAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRV--DQCA----------------- 262
+ + + S++ SGYA GK+ EA R+FD DQ A
Sbjct: 169 LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSA 228
Query: 263 ------------VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
V WN++ISGYV G EAL +FK MR G DV T+ ++LSA L
Sbjct: 229 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL 288
Query: 311 LVVELVKQMHAHACKIG-VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
+E K++H + + V+ I V T + N +
Sbjct: 289 GDLETGKRLHIYILETASVSSSIYVG---------------------------TPIWNAL 321
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
I +Y+ CG I+ A +F + + L +WN+++VGLA + +I++F M L + ++
Sbjct: 322 IDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNE 380
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
+F VI AC+ ++ G + F + + D Y +E K +
Sbjct: 381 VTFIGVILACSHSGRVDEGRKYF---------------SLMRDMYN----IEPNIKHYGC 421
Query: 490 MIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
M+ ++G A G EA M+ + P+AI + +L AC G VE G
Sbjct: 422 MVD---------MLGRA--GQLEEAFMFVESMK---IEPNAIVWRTLLGACKIYGNVELG 467
Query: 550 R 550
+
Sbjct: 468 K 468
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 9/232 (3%)
Query: 15 GRQLHVSFLKTG-ILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
G H ++ G +LN + A L+ F++ G L A++LFD+ + + +W+++ +
Sbjct: 131 GFAFHGKVVRHGFVLNEYVKNA--LILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGY 188
Query: 74 LHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIH 133
G +E++RLF MP K +WN++++ K ++ A LFD K+ + WN +I
Sbjct: 189 AKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMIS 248
Query: 134 GYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEG 193
GY G+P++AL +FK M D E H D + ++L ACA L GK++H ++
Sbjct: 249 GYVNCGYPKEALGIFKEMR-DAGE--HPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 194 ---IELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYA 242
+ + ++L+ Y KCG +D A V VK+ D + + L+ G A
Sbjct: 306 SVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 258/552 (46%), Gaps = 70/552 (12%)
Query: 103 AFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCD 162
AF+ D++ A S+F+ + N ++NT+I GYS P +A S+F + L + D
Sbjct: 68 AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL---D 124
Query: 163 AGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV 222
T L +C+ ++ G+ +H + G + D L ++L+ FY CG
Sbjct: 125 RFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD--LRNALIHFYCVCG-------- 174
Query: 223 AGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC-AVLWNSIISGYVLNGEEMEA 281
K+ +AR+VFD AV ++++++GY+ ++ A
Sbjct: 175 -----------------------KISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 282 LALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDA 341
L LF+ MR+ V +VST+ + LSA L + + H KIG+ D+ + +AL+
Sbjct: 212 LDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM 271
Query: 342 YSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSIL 401
Y K+ G I A+ IFD K +++WN ++
Sbjct: 272 YGKTGG-------------------------------ISSARRIFDCAIRKDVVTWNCMI 300
Query: 402 VGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLE 461
AK E + + +M +K + +F ++S+CA +G V +
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360
Query: 462 FDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM 521
D I+ T+LVD Y K G +E ++F+ M D SW ++ GY +G EA+TLF +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 522 RCSG--VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
VRP+ ITF VL+AC H GLV EG F M Y+ P++EHY C+VDL RA
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLS 639
G L EA +LI +P +D+ W ++L C +GN +G+ ++ ++ +P I L+
Sbjct: 481 GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Query: 640 NVLATSEDWEGS 651
A + + E S
Sbjct: 541 GTHAVAGNPEKS 552
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 154/335 (45%), Gaps = 51/335 (15%)
Query: 373 YSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
+S+ I A IF+ +S+ L +N+++ G + + P A +F ++ L +D+FSF
Sbjct: 69 FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSF 128
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK 492
+ + +C+ + C+ +GE + G A+ G + +L+ FYC CG + RKVFD M +
Sbjct: 129 ITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQ 188
Query: 493 T-DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD---------- 541
+ D V+++T++ GY + AL LFR MR S V + T + LSA
Sbjct: 189 SVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAES 248
Query: 542 -------------------------HTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLY 576
TG + R +FD I ++ ++CM+D Y
Sbjct: 249 AHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCA-----IRKDVVTWNCMIDQY 303
Query: 577 ARAGCLGEAIDLIEEMPFQ---ADANMWFSVLRGC----IAHGNRTIGKMAAEKIIQLDP 629
A+ G L E + L+ +M ++ +++ + +L C A RT+ + E+ I LD
Sbjct: 304 AKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDA 363
Query: 630 ENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQ 664
A L ++ A E + ++ M DK+V+
Sbjct: 364 ILGTA---LVDMYAKVGLLEKAVEIFNRMKDKDVK 395
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 124/563 (22%), Positives = 223/563 (39%), Gaps = 124/563 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLD--DATQLFDEMPQTNAFSWN 67
R E ++H +KTG L+ ++LL F S LD A+ +F+ + TN F +N
Sbjct: 39 RDTVEVSRIHGYMVKTG-LDKDDFAVSKLLAFSS---VLDIRYASSIFEHVSNTNLFMFN 94
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEK----THYSW-------------------------- 97
T+I + S + +F+ + K +S+
Sbjct: 95 TMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRS 154
Query: 98 ---------NMLVSAFAKSGDLQLAHSLFDSMPCK-NGLVWNTIIHGYSKRGHPRKALSL 147
N L+ + G + A +FD MP + + ++T+++GY + AL L
Sbjct: 155 GFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDL 214
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F+ M V + L + L A +D L+ + H I G++L+ L ++L+
Sbjct: 215 FRIMRKSE---VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH--LITALI 269
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
YGK G + S ARR+FD + + V WN
Sbjct: 270 GMYGKTGGISS-------------------------------ARRIFDCAIRKDVVTWNC 298
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
+I Y G E + L ++M+ + + ST +LS+ C+ ++ A +G
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS-CA----------YSEAAFVG 347
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFD 387
T VA L + E A D IL ++ +Y+ G +E A IF+
Sbjct: 348 RT----VADLLEE----------------ERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM--DKFSFASVISACASKSCL 445
M K + SW +++ G + EA+ +F +M + K+ ++ +F V++AC+ +
Sbjct: 388 RMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLV 447
Query: 446 ELGEQVFGK---AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTI 501
G + F + A + + +H +VD + G +E ++ + I +D +W +
Sbjct: 448 MEGIRCFKRMVEAYSFTPKVEHY--GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRAL 505
Query: 502 LMG---YATNGYGSEALTLFREM 521
L Y G + EM
Sbjct: 506 LAACRVYGNADLGESVMMRLAEM 528
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 255/516 (49%), Gaps = 56/516 (10%)
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC------SSLVKFYGKCGDLDSA 219
+ +VL AC + GK +HA+ + G LC + LV Y + G ++ A
Sbjct: 107 VTSVLRACGKMENMVDGKPIHAQALKNG--------LCGCVYVQTGLVGLYSRLGYIELA 158
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
+ + E + S ++L+ GY +G++ EARRVFD ++ AV WN IIS Y G+
Sbjct: 159 KKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMG 218
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
A +LF M + NIL G C+ ++ +A
Sbjct: 219 NACSLFSAMPLKSPAS-----WNILIGGYV-------------NCR-----EMKLARTYF 255
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
DA + G + TMI+ Y+ G ++ A+ +F MS K + +++
Sbjct: 256 DAMPQKNG----------------VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDA 299
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLD--LKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
++ +N P +A+ +F +M + ++ D+ + +SV+SA + G V
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
G++ D ++STSL+D Y K G K+F + K D VS++ ++MG NG +EA +L
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYA 577
F M + P+ +TFT +LSA H+GLV+EG F++MK ++N+ P +HY MVD+
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLG 478
Query: 578 RAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQ 637
RAG L EA +LI+ MP Q +A +W ++L H N G++A ++L+ + G
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSH 538
Query: 638 LSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
L+ + ++ W+ + VR+ + +K + K GCSW +
Sbjct: 539 LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 201/458 (43%), Gaps = 78/458 (17%)
Query: 7 GIGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSW 66
G + +G+ +H LK G L + L+ YSR G ++ A + FD++ + N SW
Sbjct: 115 GKMENMVDGKPIHAQALKNG-LCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDL---------------- 110
N+L+ +L SG +E+ R+F +PEK SWN+++S++AK GD+
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 111 ---------------QLAHSLFDSMPCKNGLVWNTIIHGYSK------------------ 137
+LA + FD+MP KNG+ W T+I GY+K
Sbjct: 234 SWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 138 -------------RGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQ 184
G P+ AL LF M L+ + D L++V+ A + + G
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQM-LERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Query: 185 VHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANA 244
V + + GI++ D +L +SL+ Y K GD A ++ + + D S SA++ G
Sbjct: 353 VESYITEHGIKI--DDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGIN 410
Query: 245 GKMREARRVF----DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVS-- 298
G EA +F + ++ V + ++S Y +G E F M+ H +
Sbjct: 411 GMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHY 470
Query: 299 --TVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFG 356
V + AG EL+K M GV +++AS L ++ + AC
Sbjct: 471 GIMVDMLGRAGRLEEAYELIKSMPMQP-NAGVWGALLLASGL---HNNVEFGEIACSHCV 526
Query: 357 ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
+L+ T L+ + +YS+ GR +DA+ + D++ K L
Sbjct: 527 KLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKL 564
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
SW ++ L+++ E +D++ M+ + + SV+ AC + G+ + +
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQ 129
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
A+ GL + T LV Y + G++E+ +K FD + + + VSWN++L GY +G EA
Sbjct: 130 ALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
+F ++ A+++ ++S+ G + +LF M
Sbjct: 190 RRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 176/675 (26%), Positives = 303/675 (44%), Gaps = 74/675 (10%)
Query: 15 GRQLHVSFLKTGI-LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
G LH +K+G + ++ N ++ YS+ G + A +F+E+ + S N ++
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGF 367
Query: 74 LHSGHRNESLRLFHAMP--EKTHYSWNMLVSAFAKSGDLQLA--------HSLFDSMPCK 123
+G E+ + + M +K +VS + GDL + +++ M +
Sbjct: 368 AANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 124 NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGK 183
V N++I Y K G +A LFKT + H D +++ A + + K
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKTTT-------HRDLVSWNSMISAFSQNGFTHKAK 480
Query: 184 QVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDS---AARVAGVVKEVDDFSLSALVSG 240
+ V+ E K S+++ C DS V ++++ D L S
Sbjct: 481 NLFKEVVSE---YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGD-----LTSA 532
Query: 241 YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVST 299
+ M E R + WNS+ISG +G +E+L F+ M R G + D+ T
Sbjct: 533 FLRLETMSETRDLTS---------WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLIT 583
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
+ +SA +L +V + H A K L+
Sbjct: 584 LLGTISASGNLGLVLQGRCFHGLAIK-------------------------------SLR 612
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
DT L NT+IT+Y C IE A +F +S L SWN ++ L++N E +F
Sbjct: 613 ELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF-- 670
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
L L+ ++ +F ++SA G Q I G + + +S +LVD Y CG
Sbjct: 671 -RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGM 729
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRC-SGVRPSAITFTAVLS 538
+E G KVF +WN+++ + +G G +A+ LF+E+ S + P+ +F ++LS
Sbjct: 730 LETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Query: 539 ACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
AC H+G ++EG + + M+ + + P EH +VD+ RAG L EA + I + A
Sbjct: 790 ACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKA 849
Query: 599 NMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELM 658
+W ++L C HG+ +GK AE + +++P+N YI L+N WE + ++R+++
Sbjct: 850 GVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMV 909
Query: 659 IDKNVQKIPGCSWAD 673
D ++K+PG S D
Sbjct: 910 EDNALKKLPGYSVID 924
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 172/701 (24%), Positives = 295/701 (42%), Gaps = 98/701 (13%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
R +H LK G+L L T+++LL FY R G L ++ LFDE+ + + WN++I A
Sbjct: 107 RSVHCFALKCGLLQD-LATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQ 165
Query: 76 SGHRNESLRLFHAMPEKTHYS--------------------------------------- 96
+G ++ LF M K +
Sbjct: 166 NGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 97 WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPL 156
N L++ +AK +L A +F M ++ + WNTI+ GHPRK+L FK+M+
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 157 EMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDL 216
E D + V+ AC+ L G+ +H VI G E + +S++ Y KCGD
Sbjct: 286 E---ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 217 DSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS-------RVDQCAVLWNSII 269
++A V + D S +A+++G+A G EA + + + D V+ + I
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402
Query: 270 SGYVLNGEEMEALALFK-RMRRHGVSGDVSTVANILSAGCSLLV-VELVKQMHAHACKIG 327
G + E A+ + RM + +V + C L EL+ + H
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH----- 457
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAY---DTILLNTMITVYSNC-------- 376
D+V ++++ A+S++ H+A F E+ + L+T++ + ++C
Sbjct: 458 --RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIF 515
Query: 377 -----------GRIEDAKWIFDTMS-SKTLISWNSILVGLAKNACPSEAIDIFCRMNML- 423
G + A +TMS ++ L SWNS++ G A + E++ F M+
Sbjct: 516 GKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG 575
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
++ D + ISA + + G G AI E D + +L+ Y +C +E
Sbjct: 576 KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESA 635
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
KVF + + SWN ++ + N G E LFR ++ + P+ ITF +LSA
Sbjct: 636 VKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQL 692
Query: 544 GLVEEGRNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
G G ++ + NP + + +VD+Y+ G L + + + + W
Sbjct: 693 GSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNS-ISAWN 749
Query: 603 SVLRGCIAHGNRTIGKMAAEKIIQLDPE-----NPGAYIQL 638
SV+ AHG +G+ A E +L N ++I L
Sbjct: 750 SVIS---AHGFHGMGEKAMELFKELSSNSEMEPNKSSFISL 787
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 219/433 (50%), Gaps = 34/433 (7%)
Query: 239 SGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVS 298
SG+ N+ M A +F D C +N++I GYV EAL + M + G D
Sbjct: 76 SGWENS--MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNF 133
Query: 299 TVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL 358
T +L A L + KQ+H K+G+ D+ V
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQ----------------------- 170
Query: 359 KAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFC 418
N++I +Y CG +E + +F+ + SKT SW+S++ A SE + +F
Sbjct: 171 --------NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 419 RM-NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC 477
M + +LK ++ S + ACA+ L LG + G + E + I+ TSLVD Y KC
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC 282
Query: 478 GFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
G ++ +F M K + ++++ ++ G A +G G AL +F +M G+ P + + +VL
Sbjct: 283 GCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVL 342
Query: 538 SACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQAD 597
+AC H+GLV+EGR +F M + P EHY C+VDL RAG L EA++ I+ +P + +
Sbjct: 343 NACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKN 402
Query: 598 ANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVREL 657
+W + L C N +G++AA+++++L NPG Y+ +SN+ + + W+ A+ R
Sbjct: 403 DVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTE 462
Query: 658 MIDKNVQKIPGCS 670
+ K +++ PG S
Sbjct: 463 IAIKGLKQTPGFS 475
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 47/251 (18%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
+++REG+Q+H K G L + + N L+ Y R G ++ ++ +F+++ A SW+++
Sbjct: 146 KSIREGKQIHGQVFKLG-LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHY------------------SWNM------------ 99
+ A G +E L LF M +T+ + N+
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 100 ----------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
LV + K G L A +F M +N L ++ +I G + G AL +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEG-IELEFDKVLCSSLVK 208
M + LE H V +VL AC+ + G++V A ++ EG +E + C LV
Sbjct: 325 KMIKEGLEPDHV---VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC--LVD 379
Query: 209 FYGKCGDLDSA 219
G+ G L+ A
Sbjct: 380 LLGRAGLLEEA 390
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 132/282 (46%), Gaps = 44/282 (15%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEA--HLHSGHRNESL--RLFH 87
N +++ Y ++A ++EM Q + F++ L++A L S + + ++F
Sbjct: 101 NTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFK 160
Query: 88 AMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSL 147
E + N L++ + + G+++L+ ++F+ + K W++++ + G + L L
Sbjct: 161 LGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLL 220
Query: 148 FKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLV 207
F+ M + + ++G+++ +L ACA+ ALN G +H ++ EL ++ +SLV
Sbjct: 221 FRGMCSET-NLKAEESGMVSALL-ACANTGALNLGMSIHGFLLRNISELNI--IVQTSLV 276
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
Y KCG LD A + +++ ++ + SA+
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAM------------------------------ 306
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
ISG L+GE AL +F +M + G+ D ++L+A CS
Sbjct: 307 -ISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNA-CS 346
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 225/451 (49%), Gaps = 38/451 (8%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D F+++ LV Y ++ AR++FD + V W S+ISGY G+ AL++F++M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 290 R-HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
V + T A++ A +L + K +HA G+ +IVV+S+L+D Y K
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGK---- 178
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTM--SSKTLISWNSILVGLAK 406
C +E A+ +FD+M + ++SW S++ A+
Sbjct: 179 ---------------------------CNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Query: 407 NACPSEAIDIFCRMN--MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
NA EAI++F N + + ++F ASVISAC+S L+ G+ G G E +
Sbjct: 212 NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT 271
Query: 465 IISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCS 524
+++TSL+D Y KCG + K+F + +S+ +++M A +G G A+ LF EM
Sbjct: 272 VVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG 331
Query: 525 GVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
+ P+ +T VL AC H+GLV EG M Y + P+ HY+C+VD+ R G + E
Sbjct: 332 RINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDE 391
Query: 585 AIDLIEEMPFQAD--ANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVL 642
A +L + + A+ A +W ++L HG I A++++IQ + + AYI LSN
Sbjct: 392 AYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAY 451
Query: 643 ATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
A S WE S +R M K CSW +
Sbjct: 452 AVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 210/480 (43%), Gaps = 67/480 (13%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
++ N LV ++ K ++ A LFD M N + W ++I GY+ G P+ ALS+F+ M D
Sbjct: 65 FTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHED 124
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
V + A+V AC+ GK +HAR+ + G L + V+ SSLV YGKC
Sbjct: 125 --RPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG--LRRNIVVSSSLVDMYGKCN 180
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRV--DQCAVLWNSIISGY 272
D+++ ARRVFDS + + V W S+I+ Y
Sbjct: 181 DVET-------------------------------ARRVFDSMIGYGRNVVSWTSMITAY 209
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVST--VANILSAGCSLLVVELVKQMHAHACKIGVTH 330
N EA+ LF+ S + +A+++SA SL ++ K H + G
Sbjct: 210 AQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
+ VVA++LLD Y+K A K F ++ + I +MI + G E A +FD M
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
+ + L+G+ +AC + + + L L +K+ V+ +C+
Sbjct: 330 AGRINPNYVTLLGVL-HACSHSGL-VNEGLEYLSLMAEKY---GVVPDSRHYTCVVDMLG 384
Query: 451 VFG---------KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDE---VSW 498
FG K I VG E ++ +L+ G VEI + +I++++ ++
Sbjct: 385 RFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAY 444
Query: 499 NTILMGYATNGYGSEALTLFREMRCSG-----------VRPSAITFTAVLSACDHTGLVE 547
+ YA +G ++ +L EM+ SG + S F A +CD +G +E
Sbjct: 445 IALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIE 504
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
A DT +N ++ Y I A+ +FD M ++SW S++ G P A+ +F +
Sbjct: 61 ASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQK 120
Query: 420 MNM-LDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG 478
M+ + ++++FASV AC++ + +G+ + + GL + ++S+SLVD Y KC
Sbjct: 121 MHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCN 180
Query: 479 FVEIGRKVFDGMI--KTDEVSWNTILMGYATNGYGSEALTLFREMRC--SGVRPSAITFT 534
VE R+VFD MI + VSW +++ YA N G EA+ LFR + R +
Sbjct: 181 DVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLA 240
Query: 535 AVLSACDHTGLVEEGRNLFDTM-KHNYNINPEIEHYSCMVDLYARAGCL 582
+V+SAC G ++ G+ + + Y N + + ++D+YA+ G L
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVA--TSLLDMYAKCGSL 287
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 46/283 (16%)
Query: 18 LHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSG 77
LH LK G + + T N L+ Y + ++ A +LFDEM + N SW ++I + G
Sbjct: 51 LHTLTLKLGFASDTFTV-NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 78 HRNESLRLFHAMPE-----KTHYSW------------------------------NMLVS 102
+L +F M E Y++ N++VS
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 103 A-----FAKSGDLQLAHSLFDSM--PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
+ + K D++ A +FDSM +N + W ++I Y++ +A+ LF++ +
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA-A 228
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
L + +LA+V+ AC+ L GK H V G E + V+ +SL+ Y KCG
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGG--YESNTVVATSLLDMYAKCGS 286
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRV 258
L A ++ ++ S ++++ A G A ++FD V
Sbjct: 287 LSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
+ +G D LV Y K + RK+FD M + + VSW +++ GY G AL
Sbjct: 56 LKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNAL 115
Query: 516 TLFREM-RCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
++F++M V P+ TF +V AC G+N+ ++ + + I S +VD
Sbjct: 116 SMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS-GLRRNIVVSSSLVD 174
Query: 575 LYARAGCLGEAIDLIEEM 592
+Y + + A + + M
Sbjct: 175 MYGKCNDVETARRVFDSM 192
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 217/434 (50%), Gaps = 36/434 (8%)
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
NS+I Y + AL +F+ M V D + +L A + E +Q+H K
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 326 IGVTHDIVVASALLDAYSKS-----------QGP--------------------HEACKF 354
G+ D+ V + L++ Y +S + P EA
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
F E++ + N MI+ Y+ G +++AK +FD+M + ++SWN+++ A C +E +
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 415 DIFCRMNMLD---LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLV 471
++F +M LD K D F+ SV+SACAS L GE V G+E + ++T+LV
Sbjct: 289 EVFNKM--LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
D Y KCG ++ +VF K D +WN+I+ + +G G +AL +F EM G +P+ I
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
TF VLSAC+H G++++ R LF+ M Y + P IEHY CMVDL R G + EA +L+ E
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE 466
Query: 592 MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGS 651
+P + + S+L C G + A ++++L+ + Y Q+SN+ A+ WE
Sbjct: 467 IPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV 526
Query: 652 AQVRELMIDKNVQK 665
R M + V +
Sbjct: 527 IDGRRNMRAERVNR 540
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 179/376 (47%), Gaps = 38/376 (10%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
EGRQ+H F+K+G++ + + N L+ Y R G + A ++ D MP +A SWN+L+
Sbjct: 156 FEEGRQIHGLFIKSGLV-TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTI 131
A+L G +E+ LF M E+ SWN ++S +A +G ++ A +FDSMP ++ + WN +
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 132 IHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIV 191
+ Y+ G + L +F M D E D L +VL ACA +L+ G+ VH +
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTE--KPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 192 EGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREAR 251
GIE+E L ++LV Y KCG +D +A
Sbjct: 333 HGIEIE--GFLATALVDMYSKCGKID-------------------------------KAL 359
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
VF + + WNSIIS ++G +AL +F M G + T +LSA +
Sbjct: 360 EVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 419
Query: 312 VVELVKQMHAHACKI-GVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYD-TILLNTM 369
+++ +++ + V I ++D + EA + E+ A + +ILL ++
Sbjct: 420 MLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESL 479
Query: 370 ITVYSNCGRIEDAKWI 385
+ G++E A+ I
Sbjct: 480 LGACKRFGQLEQAERI 495
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 162/344 (47%), Gaps = 12/344 (3%)
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
AHS+ + + NG N++I Y+ P AL++F+ M L P V D VL A
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP---VFPDKYSFTFVLKA 149
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
CA G+Q+H I G L D + ++LV YG+ G + A +V + D
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSG--LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV 207
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
S ++L+S Y G + EAR +FD ++ WN +ISGY G EA +F M
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRD 267
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKI--GVTH-DIVVASALLDAYSKSQGPH 349
V + V GC V+E+ +M + + G T ++ A A L + S+ + H
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 350 EACKFFG-ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
G E++ + L ++ +YS CG+I+ A +F S + + +WNSI+ L+ +
Sbjct: 328 VYIDKHGIEIEGF---LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHG 384
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+A++IF M K + +F V+SAC L+ ++F
Sbjct: 385 LGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 142/325 (43%), Gaps = 41/325 (12%)
Query: 298 STVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGE 357
ST ILS + ++Q HA K G+ HD AS L+ + + P
Sbjct: 37 STPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKT------- 89
Query: 358 LKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIF 417
+ A I + + S + NS++ A ++ P A+ +F
Sbjct: 90 ---------------------VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVF 128
Query: 418 CRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC 477
M + + DK+SF V+ ACA+ E G Q+ G I GL D + +LV+ Y +
Sbjct: 129 REMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRS 188
Query: 478 GFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
G+ EI RKV D M D VSWN++L Y G EA LF EM V ++ ++
Sbjct: 189 GYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMI 244
Query: 538 SACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM----P 593
S GLV+E + +FD+M ++ ++ MV YA GC E +++ +M
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPVR-----DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 594 FQADANMWFSVLRGCIAHGNRTIGK 618
+ D SVL C + G+ + G+
Sbjct: 300 EKPDGFTLVSVLSACASLGSLSQGE 324
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 216/429 (50%), Gaps = 8/429 (1%)
Query: 250 ARRVFDSRVDQCAVLWNSIISGYV--LNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
AR +FD L+ ++++ Y L A + F+ M V + ++
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 308 CSLLVVELVKQM-HAHACKIGVTHDIVVASALLDAYSKSQGPHE-ACKFFGELKAYDTIL 365
L + H H K G +VV +ALL +Y+ S A + F E+ + +
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 366 LNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM-NMLD 424
M++ Y+ G I +A +F+ M + + SWN+IL +N EA+ +F RM N
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
++ ++ + V+SACA L+L + + A L D +S SLVD Y KCG +E
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM---RCSGVRPSAITFTAVLSACD 541
VF K +WN+++ +A +G EA+ +F EM + ++P ITF +L+AC
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 542 HTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMW 601
H GLV +GR FD M + + I P IEHY C++DL RAG EA++++ M +AD +W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 602 FSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDK 661
S+L C HG+ + ++A + ++ L+P N G ++N+ +WE + + R+++ +
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQ 495
Query: 662 NVQKIPGCS 670
N K PG S
Sbjct: 496 NAYKPPGWS 504
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 194/465 (41%), Gaps = 45/465 (9%)
Query: 109 DLQLAHSLFDSMPCKNGLVWNTIIHGYSKRG--HPRKALSLFKTMSLDPLEMVHCDAGVL 166
+L A +FD N ++ ++ YS H A S F+ M + + +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVP--RPNHFIY 129
Query: 167 ATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV 226
VL + + VH + G L + V + L + + A ++ +
Sbjct: 130 PLVLKSTPYLSSAFSTPLVHTHLFKSGFHL-YVVVQTALLHSYASSVSHITLARQLFDEM 188
Query: 227 KEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFK 286
E + S +A++SGYA +G + A +F+ ++ WN+I++ NG +EA++LF+
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 287 RM-RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
RM + + TV +LSA ++L K +HA A + ++ D+ V+++L+D Y K
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGK- 307
Query: 346 QGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLA 405
CG +E+A +F S K+L +WNS++ A
Sbjct: 308 ------------------------------CGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 406 KNACPSEAIDIF---CRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT-VGLE 461
+ EAI +F ++N+ D+K D +F +++AC + G F G+E
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 462 FDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNGYGSEALTLFRE 520
L+D + G + +V M +K DE W ++L +G+ A +
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 521 MRCSGVRPSAITFTAVLSAC-DHTGLVEEGRNLFDTMKHNYNINP 564
+ + P+ + A+++ G EE R +KH P
Sbjct: 458 L--VALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP 500
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 84 RLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRK 143
+LF M E+ SW ++S +A+SGD+ A +LF+ MP ++ WN I+ ++ G +
Sbjct: 183 QLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLE 242
Query: 144 ALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC 203
A+SLF+ M +P + + + VL ACA L K +HA +L D +
Sbjct: 243 AVSLFRRMINEP--SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRR--DLSSDVFVS 298
Query: 204 SSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAV 263
+SLV YGKCG+L+ EA VF +
Sbjct: 299 NSLVDLYGKCGNLE-------------------------------EASSVFKMASKKSLT 327
Query: 264 LWNSIISGYVLNGEEMEALALFKRMRR 290
WNS+I+ + L+G EA+A+F+ M +
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMK 354
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 226/437 (51%), Gaps = 32/437 (7%)
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD 296
L++ Y+ + ++RR F+ + + W+SIIS + N +L K+M + D
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115
Query: 297 VSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFG 356
+ + + L ++ + +H + K G D+ V S+L+D Y+K
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAK------------ 163
Query: 357 ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDI 416
CG I A+ +FD M + +++W+ ++ G A+ EA+ +
Sbjct: 164 -------------------CGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWL 204
Query: 417 FCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCK 476
F +L ++ +SF+SVIS CA+ + LELG Q+ G +I + + +SLV Y K
Sbjct: 205 FKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSK 264
Query: 477 CGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
CG E +VF+ + + WN +L YA + + + + LF+ M+ SG++P+ ITF V
Sbjct: 265 CGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV 324
Query: 537 LSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
L+AC H GLV+EGR FD MK + I P +HY+ +VD+ RAG L EA+++I MP
Sbjct: 325 LNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDP 383
Query: 597 DANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRE 656
++W ++L C H N + AA+K+ +L P + G +I LSN A +E +A+ R+
Sbjct: 384 TESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARK 443
Query: 657 LMIDKNVQKIPGCSWAD 673
L+ D+ +K G SW +
Sbjct: 444 LLRDRGEKKETGLSWVE 460
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 40/310 (12%)
Query: 318 QMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCG 377
Q+H + K G++ +VA+ L++ YSKSQ P
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPF---------------------------- 67
Query: 378 RIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVIS 437
D++ F+ K+ +W+SI+ A+N P +++ +M +L+ D S
Sbjct: 68 ---DSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATK 124
Query: 438 ACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVS 497
+CA S ++G V ++ G + D + +SLVD Y KCG + RK+FD M + + V+
Sbjct: 125 SCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVT 184
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK 557
W+ ++ GYA G EAL LF+E + + +F++V+S C ++ L+E GR + +
Sbjct: 185 WSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LS 243
Query: 558 HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIG 617
+ + S +V LY++ G A + E+P + + +W ++L+ H +
Sbjct: 244 IKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSH---- 298
Query: 618 KMAAEKIIQL 627
+K+I+L
Sbjct: 299 ---TQKVIEL 305
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 142/339 (41%), Gaps = 77/339 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT-------- 61
R+ +G QLH +K+G+ L AN L+ FYS+ D+ + F++ PQ
Sbjct: 29 RSTIKGLQLHGYVVKSGLSLIPLV-ANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSI 87
Query: 62 ------NAFSWNTL-IEAHLHSGH-------------------RNESLRLFHAMPEKTHY 95
N W +L + +G+ R + R H + KT Y
Sbjct: 88 ISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY 147
Query: 96 SWNM-----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
++ LV +AK G++ A +FD MP +N + W+ +++GY++ G +AL LFK
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
+ L + + ++V+ CA+ L G+Q+H + + + SSLV Y
Sbjct: 208 ALFENLAV---NDYSFSSVISVCANSTLLELGRQIHG--LSIKSSFDSSSFVGSSLVSLY 262
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
KCG + A +V V N G +WN+++
Sbjct: 263 SKCGVPEGAYQVFNEVP-------------VKNLG------------------IWNAMLK 291
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
Y + + + LFKRM+ G+ + T N+L+A CS
Sbjct: 292 AYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA-CS 329
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 32/276 (11%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
+ D F S+LV YA G++ AR++FD + V W+ ++ GY GE EAL LFK
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
Query: 288 MRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQG 347
++ + + ++++S + ++EL +Q+H + K V S+L+ YSK
Sbjct: 208 ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 348 PHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKN 407
P A + F E+ K L WN++L A++
Sbjct: 268 PEGAYQVFNEVPV-------------------------------KNLGIWNAMLKAYAQH 296
Query: 408 ACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIS 467
+ + I++F RM + +K + +F +V++AC+ ++ G F + +E
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY 356
Query: 468 TSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
SLVD + G ++ +V M I E W +L
Sbjct: 357 ASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 45/247 (18%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
GR +H +KTG ++ + + L+ Y++ G + A ++FDEMPQ N +W+ ++ +
Sbjct: 135 GRSVHCLSMKTG-YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 75 HSGHRNESLRLF-HAMPEK---THYSWN-------------------------------- 98
G E+L LF A+ E YS++
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 99 ---MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
LVS ++K G + A+ +F+ +P KN +WN ++ Y++ H +K + LFK M L
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
++ + VL AC+ ++ G+ ++ IE DK +SLV G+ G
Sbjct: 314 MKP---NFITFLNVLNACSHAGLVDEGRYYFDQMKESRIE-PTDKHY-ASLVDMLGRAGR 368
Query: 216 LDSAARV 222
L A V
Sbjct: 369 LQEALEV 375
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 17/185 (9%)
Query: 435 VISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTD 494
++S+ ++S ++ G Q+ G + GL +++ +L++FY K R+ F+ +
Sbjct: 22 LLSSARTRSTIK-GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 495 EVSWNTILMGYATNGYGSEALTLFREMRCSGVR------PSAITFTAVLSACDHTGLVEE 548
+W++I+ +A N +L ++M +R PSA A+LS CD
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI------ 134
Query: 549 GRNLF-DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
GR++ +MK Y+ + + S +VD+YA+ G + A + +EMP Q + W ++ G
Sbjct: 135 GRSVHCLSMKTGYDADVFVG--SSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMMYG 191
Query: 608 CIAHG 612
G
Sbjct: 192 YAQMG 196
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 181/328 (55%), Gaps = 24/328 (7%)
Query: 355 FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAI 414
F E +D + ++ Y+NCG++ +A+ +F+ + L +WN++L A SE I
Sbjct: 142 FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN----SEEI 197
Query: 415 D-------IFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG-----KAITVGLEF 462
D +F RM ++ ++ S ++I KSC LGE V G + L
Sbjct: 198 DSDEEVLLLFMRM---QVRPNELSLVALI-----KSCANLGEFVRGVWAHVYVLKNNLTL 249
Query: 463 DHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMR 522
+ + TSL+D Y KCG + RKVFD M + D +N ++ G A +G+G E + L++ +
Sbjct: 250 NQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLI 309
Query: 523 CSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCL 582
G+ P + TF +SAC H+GLV+EG +F++MK Y I P++EHY C+VDL R+G L
Sbjct: 310 SQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRL 369
Query: 583 GEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVL 642
EA + I++MP + +A +W S L HG+ G++A + ++ L+ EN G Y+ LSN+
Sbjct: 370 EEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIY 429
Query: 643 ATSEDWEGSAQVRELMIDKNVQKIPGCS 670
A W + RELM D V K PG S
Sbjct: 430 AGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 45/288 (15%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM----EALALF 285
D F +ALV YAN GK+REAR +F+ + WN++++ Y N EE+ E L LF
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA-NSEEIDSDEEVLLLF 207
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQM--HAHACKIGVTHDIVVASALLDAYS 343
RM+ ++S VA I S C+ L E V+ + H + K +T + V ++L+D YS
Sbjct: 208 MRMQVR--PNELSLVALIKS--CANL-GEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYS 262
Query: 344 KSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVG 403
K CG + A+ +FD MS + + +N+++ G
Sbjct: 263 K-------------------------------CGCLSFARKVFDEMSQRDVSCYNAMIRG 291
Query: 404 LAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV-GLEF 462
LA + E I+++ + L D +F ISAC+ ++ G Q+F V G+E
Sbjct: 292 LAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEP 351
Query: 463 DHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNG 509
LVD + G +E + M +K + W + L T+G
Sbjct: 352 KVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 51/330 (15%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
++L+ +Q+H + G+ + + + +LL S CL A + ++P + F +NTL
Sbjct: 20 KSLQNLKQIHAQIITIGLSHHTYPLS-KLLHL-SSTVCLSYALSILRQIPNPSVFLYNTL 77
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLV--------SAFAKSG-DLQL-------- 112
I + + S H + L ++ ++ S + V S F SG D Q
Sbjct: 78 ISS-IVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALH 136
Query: 113 AHSLFDSMPCKNG-LVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLG 171
AH L P + V ++ Y+ G R+A SLF+ + +P D T+L
Sbjct: 137 AHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIR-EP------DLATWNTLLA 189
Query: 172 ACADCFALNCGKQV---HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
A A+ ++ ++V R+ V EL SLV C +L R GV
Sbjct: 190 AYANSEEIDSDEEVLLLFMRMQVRPNEL--------SLVALIKSCANLGEFVR--GVWAH 239
Query: 229 V---------DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
V + F ++L+ Y+ G + AR+VFD + +N++I G ++G
Sbjct: 240 VYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQ 299
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCS 309
E + L+K + G+ D +T +SA CS
Sbjct: 300 EGIELYKSLISQGLVPDSATFVVTISA-CS 328
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 175/309 (56%), Gaps = 4/309 (1%)
Query: 366 LNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM-NMLD 424
+N +I G AK + S + +I+WN ++ G +N EA+ M + D
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
+K +KFSFAS ++ACA L + V I G+E + I+S++LVD Y KCG + R
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
+VF + + D WN ++ G+AT+G +EA+ +F EM V P +ITF +L+ C H G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 545 LVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSV 604
L+EEG+ F M ++I P++EHY MVDL RAG + EA +LIE MP + D +W S+
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 605 LRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQ 664
L + N +G++A I L G Y+ LSN+ ++++ WE + +VRELM + ++
Sbjct: 341 LSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 665 KIPGCSWAD 673
K G SW +
Sbjct: 398 KAKGKSWLE 406
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 153/354 (43%), Gaps = 54/354 (15%)
Query: 162 DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAAR 221
D G+L VL +C C Q HA++ G + +L S+ V Y +C A R
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYG-TYPSLLVST-VAAYRRCNRSYLARR 86
Query: 222 V--------AGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
+ GV +++ ++ G+ A++V + DQ + WN +I GYV
Sbjct: 87 LLLWFLSLSPGVC------NINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYV 140
Query: 274 LNGEEMEALALFKRMRRH-GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
N + EAL K M + + + A+ L+A L + K +H+ G+ +
Sbjct: 141 RNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNA 200
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
+++SAL+D VY+ CG I ++ +F ++
Sbjct: 201 ILSSALVD-------------------------------VYAKCGDIGTSREVFYSVKRN 229
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+ WN+++ G A + +EAI +F M + D +F +++ C+ LE G++ F
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 453 G---KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
G + ++ + +H ++VD + G V+ ++ + M I+ D V W ++L
Sbjct: 290 GLMSRRFSIQPKLEHY--GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 143/312 (45%), Gaps = 36/312 (11%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
N+++ + K G+ LA + + +N + WN +I GY + +AL K M
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNML--SFT 159
Query: 158 MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLD 217
+ + A+ L ACA L+ K VH+ +I GIEL + +L S+LV Y KCGD+
Sbjct: 160 DIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL--NAILSSALVDVYAKCGDIG 217
Query: 218 SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCAVLWNSIIS--- 270
++ V VK D +A+++G+A G EA RVF V ++ + +++
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS 277
Query: 271 --GYVLNGEEMEAL-----ALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
G + G+E L ++ ++ +G D+ + AG EL++ M
Sbjct: 278 HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDL-----LGRAGRVKEAYELIESM---- 328
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHE---ACKFFGELKAYDTILLNTMITVYSNCGRIE 380
+ D+V+ +LL + + P A + + K+ D +LL+ +YS+ + E
Sbjct: 329 ---PIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLS---NIYSSTKKWE 382
Query: 381 DAKWIFDTMSSK 392
A+ + + MS +
Sbjct: 383 SAQKVRELMSKE 394
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 249/542 (45%), Gaps = 79/542 (14%)
Query: 162 DAGVLATVLGACADCFALNCGKQVHARVIVEGI---ELEFDKVLCSSLVKFYGKCGDLDS 218
D +++ AC D +L + VHA+++ G+ + V CSSL+K
Sbjct: 28 DESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLVSCSSLLK---------- 74
Query: 219 AARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEE 278
D+SLS +F + ++ + N++I G N
Sbjct: 75 ----------SPDYSLS-----------------IFRNSEERNPFVLNALIRGLTENARF 107
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASAL 338
++ F M R GV D T +L + L L + +HA K V D V +L
Sbjct: 108 ESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSL 167
Query: 339 LDAYSKS-----------QGP------------------------HEACKFFGELKAYDT 363
+D Y+K+ + P H A F + ++
Sbjct: 168 VDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS 227
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
+T+I Y + G + AK +F+ M K ++SW +++ G ++ AI + M
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
LK ++++ A+V+SAC+ L G ++ G + G++ D I T+LVD Y KCG ++
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
VF M D +SW ++ G+A +G +A+ FR+M SG +P + F AVL+AC ++
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFS 603
V+ G N FD+M+ +Y I P ++HY +VDL RAG L EA +L+E MP D W +
Sbjct: 408 SEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 604 VLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNV 663
+ R C AH + ++ +++LDPE G+YI L A+ + + + R L + K +
Sbjct: 468 LYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQ-DVEKRRLSLQKRI 526
Query: 664 QK 665
++
Sbjct: 527 KE 528
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 130/247 (52%), Gaps = 16/247 (6%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLI 70
GR LH + LK + S + L+ Y++ G L A Q+F+E P + + WN LI
Sbjct: 145 GRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 71 EAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNT 130
+ + + + LF +MPE+ SW+ L+ + SG+L A LF+ MP KN + W T
Sbjct: 204 NGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTT 263
Query: 131 IIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA 187
+I+G+S+ G A+S + M L P E +A VL AC+ AL G ++H
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEY------TIAAVLSACSKSGALGSGIRIHG 317
Query: 188 RVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKM 247
++ GI+L D+ + ++LV Y KCG+LD AA V + D S +A++ G+A G+
Sbjct: 318 YILDNGIKL--DRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRF 375
Query: 248 REARRVF 254
+A + F
Sbjct: 376 HQAIQCF 382
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 204/499 (40%), Gaps = 95/499 (19%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLH 75
R +H L+ G+L+S + A +L+ S D + +F + N F N LI
Sbjct: 46 RHVHAQILRRGVLSSRV--AAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTE 103
Query: 76 SGHRNESLRLFHAM------PEKTHYSWNMLVSA---FAKSGDLQLAHSLFDSMPCKNGL 126
+ S+R F M P++ + + + ++ F G A +L + + C +
Sbjct: 104 NARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDC-DSF 162
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
V +++ Y+K G + A +F+ +
Sbjct: 163 VRLSLVDMYAKTGQLKHAFQVFE----------------------------------ESP 188
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
R+ E I ++ + L+ Y + D+ A + + E + S S L+ GY ++G+
Sbjct: 189 DRIKKESI------LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGE 242
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
+ A+++F+ ++ V W ++I+G+ G+ A++ + M G+ + T+A +LSA
Sbjct: 243 LNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSA 302
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
+ ++H + G+ D + +AL+D Y+K
Sbjct: 303 CSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAK---------------------- 340
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
CG ++ A +F M+ K ++SW +++ G A + +AI F +M K
Sbjct: 341 ---------CGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEK 391
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL------VDFYCKCGFV 480
D+ F +V++AC + S ++LG F + D+ I +L VD + G +
Sbjct: 392 PDEVVFLAVLTACLNSSEVDLGLNFFD-----SMRLDYAIEPTLKHYVLVVDLLGRAGKL 446
Query: 481 EIGRKVFDGM-IKTDEVSW 498
++ + M I D +W
Sbjct: 447 NEAHELVENMPINPDLTTW 465
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/620 (25%), Positives = 263/620 (42%), Gaps = 107/620 (17%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
++L G+Q+HV G L S+ +L+ Y+ G + DA ++FDE +N +SWN L
Sbjct: 125 KSLLHGKQVHVHIRING-LESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNAL 183
Query: 70 IEAHLHSGHR--NESLRLFHAMPE---------------------------KTH------ 94
+ + SG + + L F M E KTH
Sbjct: 184 LRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKN 243
Query: 95 ------YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
+ LV + K G + LA +FD + ++ +VW +I G + +AL LF
Sbjct: 244 GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLF 303
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+TM + E ++ ++ +L T+L D AL GK+VHA V+ +E + S L+
Sbjct: 304 RTMISE--EKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLID 360
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
Y KCGD+ S RRVF + A+ W ++
Sbjct: 361 LYCKCGDMASG-------------------------------RRVFYGSKQRNAISWTAL 389
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
+SGY NG +AL M++ G DV T+A +L L ++ K++H +A K
Sbjct: 390 MSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK--- 446
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDT 388
L + L+ +++ +YS CG E +FD
Sbjct: 447 ----------------------------NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDR 478
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
+ + + +W +++ +N I++F M + + D + V++ C+ L+LG
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATN 508
+++ G + E +S ++ Y KCG + FD + ++W I+ Y N
Sbjct: 539 KELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCN 598
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
+A+ F +M G P+ TFTAVLS C G V+E F+ M YN+ P EH
Sbjct: 599 ELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEH 658
Query: 569 YSCMVDLYARAGCLGEAIDL 588
YS +++L R G + EA L
Sbjct: 659 YSLVIELLNRCGRVEEAQRL 678
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 136/613 (22%), Positives = 257/613 (41%), Gaps = 96/613 (15%)
Query: 75 HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP--CKNGLVWNTII 132
H HR++ P + + S K + + S+P KN + + I
Sbjct: 24 HRPHRSDKDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNPYIIHRDI 83
Query: 133 HGYSKRGHPRKALSLFKTMSLDPLEM--VHCDAGVLATVLGACADCFALNCGKQVHARVI 190
++++ + AL++ LD LE + +A + +L AC +L GKQVH +
Sbjct: 84 QIFARQNNLEVALTI-----LDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIR 138
Query: 191 VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
+ G LE ++ L + LV Y C G +++A
Sbjct: 139 ING--LESNEFLRTKLVHMYTAC-------------------------------GSVKDA 165
Query: 251 RRVFDSRVDQCAVLWNSIISGYVLNGEE--MEALALFKRMRRHGVSGDVSTVANILS--A 306
++VFD WN+++ G V++G++ + L+ F MR GV +V +++N+ A
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILL 366
G S L L + HA A K G+ + + + ++L+D Y K
Sbjct: 226 GASALRQGL--KTHALAIKNGLFNSVFLKTSLVDMYFK---------------------- 261
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM-NMLDL 425
CG++ A+ +FD + + ++ W +++ GLA N EA+ +F M + +
Sbjct: 262 ---------CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 426 KMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH-IISTSLVDFYCKCGFVEIGR 484
+ +++ L+LG++V + + + + L+D YCKCG + GR
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGR 372
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
+VF G + + +SW ++ GYA NG +AL M+ G RP +T VL C
Sbjct: 373 RVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR 432
Query: 545 LVEEGRNLFDTMKHNYNIN----PEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANM 600
+++G+ + H Y + P + + ++ +Y++ G I L + + Q +
Sbjct: 433 AIKQGKEI-----HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKA 486
Query: 601 WFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVREL--- 657
W +++ C + +++ L P + + + VL D + +EL
Sbjct: 487 WTAMI-DCYVENCDLRAGIEVFRLMLLSKHRPDS-VTMGRVLTVCSDLKALKLGKELHGH 544
Query: 658 MIDKNVQKIPGCS 670
++ K + IP S
Sbjct: 545 ILKKEFESIPFVS 557
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 162/567 (28%), Positives = 267/567 (47%), Gaps = 83/567 (14%)
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A LFD +P ++ N+ + + + G+P L+LF + ++ + VLGA
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDL---SSHTFTPVLGA 93
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C+ G+QVHA +I +G E
Sbjct: 94 CSLLSYPETGRQVHALMIKQG---------------------------------AETGTI 120
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
S +AL+ Y+ G + ++ RVF+S ++ V WN+++SG++ NG+ EAL +F M R
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVV-ASALLDAYSKSQGPHEA 351
V T+++++ SL +++ KQ+HA G D+VV +A++ YS +EA
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEA 238
Query: 352 CKFFGELKAY-DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
K + L + D ++LN++I S C R + K F MS +
Sbjct: 239 MKVYNSLNVHTDEVMLNSLI---SGCIRNRNYKEAFLLMSRQ------------------ 277
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
R N+ L +S ++ C+ S L +G+Q+ A+ G D + L
Sbjct: 278 --------RPNVRVL-------SSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL 322
Query: 471 VDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREM--RCSGVRP 528
+D Y KCG + R +F + VSW +++ YA NG G +AL +FREM SGV P
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 529 SAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDL 588
+++TF V+SAC H GLV+EG+ F MK Y + P EHY C +D+ ++AG E L
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 589 IEEMPFQADAN----MWFSVLRGCIAHGNRTIGKMAAEKII-QLDPENPGAYIQLSNVLA 643
+E M + + +W +VL C + + T G+ A +++ + PEN Y+ +SN A
Sbjct: 443 VERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYA 502
Query: 644 TSEDWEGSAQVRELMIDKNVQKIPGCS 670
W+ ++R + +K + K G S
Sbjct: 503 AMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 210/485 (43%), Gaps = 124/485 (25%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
LR GR F++ G N ++ + N +L+ R A LFDE+PQ + S N+ +
Sbjct: 5 LRIGR-----FIRLG--NVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLS 57
Query: 72 AHLHSGHRNESLRLF----HAMPEKTHYSW------------------------------ 97
+HL SG+ N++L LF A P+ + +++
Sbjct: 58 SHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAET 117
Query: 98 -----NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
L+ ++K G L + +F+S+ K+ + WN ++ G+ + G ++AL +F M
Sbjct: 118 GTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMY 177
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
+ +E+ L++V+ CA L GKQVHA V+V G +L VL ++++ FY
Sbjct: 178 RERVEI---SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL---VVLGTAMISFYSS 231
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS-RVDQCAVLWNSIISG 271
G ++ EA +V++S V V+ NS+ISG
Sbjct: 232 VGLIN-------------------------------EAMKVYNSLNVHTDEVMLNSLISG 260
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLV-VELVKQMHAHACKIGVTH 330
+ N EA L R R +V +++ L AGCS + + KQ+H A + G
Sbjct: 261 CIRNRNYKEAFLLMSRQR-----PNVRVLSSSL-AGCSDNSDLWIGKQIHCVALRNGFVS 314
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
D + + L+D Y K CG+I A+ IF +
Sbjct: 315 DSKLCNGLMDMYGK-------------------------------CGQIVQARTIFRAIP 343
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRM--NMLDLKMDKFSFASVISACASKSCLELG 448
SK+++SW S++ A N +A++IF M + + +F VISACA ++ G
Sbjct: 344 SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEG 403
Query: 449 EQVFG 453
++ FG
Sbjct: 404 KECFG 408
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/578 (27%), Positives = 259/578 (44%), Gaps = 68/578 (11%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
Y L +A + DL A LFD P ++ +WN+II Y+K LSLF +
Sbjct: 41 YFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRS 100
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
+ LA D L C +H IV G L FD++ CG
Sbjct: 101 DTRPDNFTYACLARGFSESFDTKGLRC---IHGIAIVSG--LGFDQI-----------CG 144
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
SA+V Y+ AG + EA ++F S D LWN +I GY
Sbjct: 145 --------------------SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVV 334
G + + LF M+ G + T+ + S ++ + +HA KI + V
Sbjct: 185 CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYV 244
Query: 335 ASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
AL++ YS+ C I A +F+++S L
Sbjct: 245 GCALVNMYSR-------------------------------CMCIASACSVFNSISEPDL 273
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
++ +S++ G ++ EA+ +F + M K D A V+ +CA S G++V
Sbjct: 274 VACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSY 333
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEA 514
I +GLE D + ++L+D Y KCG ++ +F G+ + + VS+N++++G +G+ S A
Sbjct: 334 VIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTA 393
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
F E+ G+ P ITF+A+L C H+GL+ +G+ +F+ MK + I P+ EHY MV
Sbjct: 394 FEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVK 453
Query: 575 LYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA 634
L AG L EA + + + D+ + ++L C H N + ++ AE I + E
Sbjct: 454 LMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSV 513
Query: 635 Y-IQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
Y + LSNV A W+ ++R+ + + K+PG SW
Sbjct: 514 YKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 170/402 (42%), Gaps = 44/402 (10%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D + + L YA + AR++FD ++ LWNSII Y + L+LF ++
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
R D T A + + ++ +H A G+ D + SA++ AYSK+
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 350 EACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNAC 409
EA K F + D L N MI Y CG W+
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCG------------------FWD----------- 189
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
+ I++F M + + ++ ++ S S L + V + + L+ + +
Sbjct: 190 --KGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCA 247
Query: 470 LVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPS 529
LV+ Y +C + VF+ + + D V+ ++++ GY+ G EAL LF E+R SG +P
Sbjct: 248 LVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPD 307
Query: 530 AITFTAVLSACDHTGLVEEGRNLFDTMKHNYNIN----PEIEHYSCMVDLYARAGCLGEA 585
+ VL +C G+ + H+Y I +I+ S ++D+Y++ G L A
Sbjct: 308 CVLVAIVLGSCAELSDSVSGKEV-----HSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 586 IDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQL 627
+ L +P + + + S++ G HG A EK ++
Sbjct: 363 MSLFAGIP-EKNIVSFNSLILGLGLHG---FASTAFEKFTEI 400
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 9/230 (3%)
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
A D + Y+ + A+ +FD +++ WNSI+ AK + + +F +
Sbjct: 37 ARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQ 96
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
+ D + D F++A + + + + G AI GL FD I +++V Y K G
Sbjct: 97 ILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGL 156
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+ K+F + D WN +++GY G+ + + LF M+ G +P+ T A+ S
Sbjct: 157 IVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS- 215
Query: 540 CDHTGLVEEGRNLFDTMKHNYNINPEIEHYS----CMVDLYARAGCLGEA 585
GL++ L H + + ++ +S +V++Y+R C+ A
Sbjct: 216 ----GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 58/300 (19%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH--- 94
+++ YS+ G + +A++LF +P + WN +I + G ++ + LF+ M + H
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN 206
Query: 95 ------------------YSWNM------------------LVSAFAKSGDLQLAHSLFD 118
+W++ LV+ +++ + A S+F+
Sbjct: 207 CYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFN 266
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA 178
S+ + + +++I GYS+ G+ ++AL LF + + + D ++A VLG+CA+
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKP---DCVLVAIVLGSCAELSD 323
Query: 179 LNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALV 238
GK+VH+ VI G+EL D +CS+L+ Y KCG L A + + E + S ++L+
Sbjct: 324 SVSGKEVHSYVIRLGLEL--DIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLI 381
Query: 239 SGYANAGKMREARRVFDSRVDQ---------CAVLWNSIISGYVLNGEEMEALALFKRMR 289
G G A F ++ A+L SG + G+E +F+RM+
Sbjct: 382 LGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQE-----IFERMK 436
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 206/427 (48%), Gaps = 42/427 (9%)
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAG---- 307
RVF R++ N++I + L+ E LF+ +RR+ S AN LS+
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNS-----SLPANPLSSSFALK 121
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLN 367
C + +L+ + H K F + D++L+
Sbjct: 122 CCIKSGDLLGGLQIHG-----------------------------KIFSDGFLSDSLLMT 152
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM-NMLD-- 424
T++ +YS C DA +FD + + +SWN + +N + + +F +M N +D
Sbjct: 153 TLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGC 212
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
+K D + + ACA+ L+ G+QV GL +S +LV Y +CG ++
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAY 272
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
+VF GM + + VSW ++ G A NG+G EA+ F EM G+ P T T +LSAC H+G
Sbjct: 273 QVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSG 332
Query: 545 LVEEGRNLFDTMKH-NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFS 603
LV EG FD M+ + I P + HY C+VDL RA L +A LI+ M + D+ +W +
Sbjct: 333 LVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRT 392
Query: 604 VLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNV 663
+L C HG+ +G+ +I+L E G Y+ L N +T WE ++R LM +K +
Sbjct: 393 LLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRI 452
Query: 664 QKIPGCS 670
PGCS
Sbjct: 453 HTKPGCS 459
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 175/439 (39%), Gaps = 74/439 (16%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQFYSRRGC------LDDATQLFDEMPQTNAFSWNTL 69
RQ+H L+T ++ +S + F SR ++ + ++F + NT+
Sbjct: 28 RQIHALLLRTSLIRNS----DVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTM 83
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFA-----KSGDLQ------------- 111
I A S E RLF ++ + N L S+FA KSGDL
Sbjct: 84 IRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDG 143
Query: 112 -LAHSL---------------------FDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
L+ SL FD +P ++ + WN + Y + R L LF
Sbjct: 144 FLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFD 203
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
M D V D L ACA+ AL+ GKQVH + G+ + L ++LV
Sbjct: 204 KMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN--LSNTLVSM 261
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
Y +CG +D A +V ++E + S +AL+SG A G +EA F+ + +
Sbjct: 262 YSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTL 321
Query: 270 SGYVL----NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVV---ELVKQMHAH 322
+G + +G E + F RMR SG+ N+ GC + ++ L+ + ++
Sbjct: 322 TGLLSACSHSGLVAEGMMFFDRMR----SGEFKIKPNLHHYGCVVDLLGRARLLDKAYSL 377
Query: 323 ACKIGVTHDIVVASALLDA---YSKSQGPHEACKFFGELKAYD----TILLNTMITVYSN 375
+ + D + LL A + + ELKA + +LLNT YS
Sbjct: 378 IKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNT----YST 433
Query: 376 CGRIEDAKWIFDTMSSKTL 394
G+ E + M K +
Sbjct: 434 VGKWEKVTELRSLMKEKRI 452
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H F+ L+ +L +N L+ YSR G +D A Q+F M + N SW LI
Sbjct: 236 GKQVH-DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA 294
Query: 75 HSGHRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVW 128
+G E++ F+ M PE+ + L+SA + SG + FD M +
Sbjct: 295 MNGFGKEAIEAFNEMLKFGISPEEQ--TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIK 352
Query: 129 NTIIHG---YSKRGHPR---KALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCG 182
+ H G R KA SL K+M + P D+ + T+LGAC + G
Sbjct: 353 PNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKP------DSTIWRTLLGACRVHGDVELG 406
Query: 183 KQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
++V + +I E D VL L+ Y G + + ++KE
Sbjct: 407 ERVISHLIELKAEEAGDYVL---LLNTYSTVGKWEKVTELRSLMKE 449
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 259/518 (50%), Gaps = 38/518 (7%)
Query: 83 LRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
L +F+++P +++++ ++ +FDS+ N V N++ +SK
Sbjct: 29 LIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMAN 88
Query: 143 KALSLFKTMS---LDP----LEMVHCDAG-------VLATVLGACADCFALNCGKQVHAR 188
L L++ S + P +V AG L LG D + N ++ +
Sbjct: 89 DVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVK 148
Query: 189 -VIVEGIELEFDKVL------CSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGY 241
VE FD++ + ++ Y K G+ + A ++ ++ E D S + +++G+
Sbjct: 149 HESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGF 208
Query: 242 ANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVA 301
A + AR+ FD ++ V WN+++SGY NG +AL LF M R GV + +T
Sbjct: 209 AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 302 NILSAGCSL-----LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFG 356
++SA CS L LVK + ++ + V +ALLD ++K + A + F
Sbjct: 269 IVISA-CSFRADPSLTRSLVKLIDEKRVRL----NCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 357 EL-KAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAID 415
EL + + N MI+ Y+ G + A+ +FDTM + ++SWNS++ G A N + AI+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 416 IFCRM-NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
F M + D K D+ + SV+SAC + LELG+ + ++ + SL+ Y
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
+ G + ++VFD M + D VS+NT+ +A NG G E L L +M+ G+ P +T+T
Sbjct: 444 ARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYT 503
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
+VL+AC+ GL++EG+ +F +++ NP +HY+CM
Sbjct: 504 SVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 209/420 (49%), Gaps = 40/420 (9%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHY 95
N ++ Y + ++ A ++FD++ Q WN +I + G++ E+ +LF MPE
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV 199
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
SW ++++ FAK DL+ A FD MP K+ + WN ++ GY++ G AL LF M
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM---- 255
Query: 156 LEM-VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
L + V + V+ AC+ F + +++ + + + ++L+ + KC
Sbjct: 256 LRLGVRPNETTWVIVISACS--FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 215 DLDSAARVAGVV-KEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYV 273
D+ SA R+ + + + + +A++SGY G M AR++FD+ + V WNS+I+GY
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 274 LNGEEMEALALFKRMRRHGVSG-DVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
NG+ A+ F+ M +G S D T+ ++LSA C G D+
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSA-C------------------GHMADL 414
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
+ ++D K+Q +K D+ ++I +Y+ G + +AK +FD M +
Sbjct: 415 ELGDCIVDYIRKNQ-----------IKLNDS-GYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
++S+N++ A N E +++ +M ++ D+ ++ SV++AC L+ G+++F
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 336 SALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
+ ++ Y K EACK F + D + MIT ++ +E+A+ FD M K+++
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
SWN++L G A+N +A+ +F M L ++ ++ ++ VISAC+ ++ L +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 456 ITVGLEFDHIISTSLVDFYCKC---------------------------GFVEIG----- 483
+ + + T+L+D + KC G+ IG
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG-VRPSAITFTAVLSACDH 542
R++FD M K + VSWN+++ GYA NG + A+ F +M G +P +T +VLSAC H
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+E G + D ++ N I Y ++ +YAR G L EA + +EM
Sbjct: 411 MADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 135/319 (42%), Gaps = 81/319 (25%)
Query: 31 SLTTANRLLQFYSRRGCLDDATQLFDEM----PQTNAFSWNTLIEA-------------- 72
S+ + N +L Y++ G +DA +LF++M + N +W +I A
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV 287
Query: 73 -------------------HLHSGHRN--ESLRLFHAM-PEKTHYSWNMLVSAFAKSGDL 110
+H+ R+ + R+F+ + ++ +WN ++S + + GD+
Sbjct: 288 KLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDM 347
Query: 111 QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
A LFD+MP +N + WN++I GY+ G A+ F+ M +D + D + +VL
Sbjct: 348 SSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM-IDYGD-SKPDEVTMISVL 405
Query: 171 GACADCFALNCGKQVHARVIVEGI---ELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVK 227
AC L G IV+ I +++ + SL+ Y + G+L A RV +K
Sbjct: 406 SACGHMADLELGD-----CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
E D V +N++ + + NG+ +E L L +
Sbjct: 461 ERD-------------------------------VVSYNTLFTAFAANGDGVETLNLLSK 489
Query: 288 MRRHGVSGDVSTVANILSA 306
M+ G+ D T ++L+A
Sbjct: 490 MKDEGIEPDRVTYTSVLTA 508
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 43/199 (21%)
Query: 31 SLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAM- 89
+L T N ++ Y+R G + A QLFD MP+ N SWN+LI + H+G ++ F M
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 90 ------PEKT----------HYS-----------------------WNMLVSAFAKSGDL 110
P++ H + + L+ +A+ G+L
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 111 QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
A +FD M ++ + +NT+ ++ G + L+L M + +E D +VL
Sbjct: 450 WEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE---PDRVTYTSVL 506
Query: 171 GACADCFALNCGKQVHARV 189
AC L G+++ +
Sbjct: 507 TACNRAGLLKEGQRIFKSI 525
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 183/315 (58%), Gaps = 12/315 (3%)
Query: 368 TMITVYSNCGRIEDAKWIFD-TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
+++ YS+ G ++ A+ +FD T + ++ W +++ +N EAI++F RM ++
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVG--LEFDHIISTSLVDFYCKCGFVEIGR 484
+D +SACA +++GE+++ ++I L D + SL++ Y K G E R
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRC------SGVRPSAITFTAVLS 538
K+FD ++ D ++ +++ GYA NG E+L LF++M+ + + P+ +TF VL
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLM 284
Query: 539 ACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
AC H+GLVEEG+ F +M +YN+ P H+ CMVDL+ R+G L +A + I +MP + +
Sbjct: 285 ACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 599 NMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELM 658
+W ++L C HGN +G+ +I +LD ++ G Y+ LSN+ A+ W+ +++R+ +
Sbjct: 345 VIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
Query: 659 IDKNVQKIPGCSWAD 673
+++PG SW +
Sbjct: 405 ---RKRRMPGKSWIE 416
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 161/387 (41%), Gaps = 80/387 (20%)
Query: 129 NTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHAR 188
N + Y + G P KAL F+ V + + A + + +L+ G+Q+HA
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHAL 90
Query: 189 VIVEGIELEFDKVLC--SSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
V +L F+ V+ +SLV FY GD+D A
Sbjct: 91 VR----KLGFNAVIQIQTSLVGFYSSVGDVDYA--------------------------- 119
Query: 247 MREARRVFDSRVD-QCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
R+VFD + Q VLW ++IS Y N +EA+ LFKRM + D V LS
Sbjct: 120 ----RQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALS 175
Query: 306 AGCSLLVVELVKQMHAHACKIG--VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT 363
A L V++ +++++ + K + D+ + ++LL+ Y KS +A K F E D
Sbjct: 176 ACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKD- 234
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
+T Y+ S++ G A N E++++F +M +
Sbjct: 235 ------VTTYT------------------------SMIFGYALNGQAQESLELFKKMKTI 264
Query: 424 DLKMD------KFSFASVISACASKSCLELGEQVFGKAIT-VGLEFDHIISTSLVDFYCK 476
D D +F V+ AC+ +E G++ F I L+ +VD +C+
Sbjct: 265 DQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 477 CGFVEIGRKVFDGM-IKTDEVSWNTIL 502
G ++ + + M IK + V W T+L
Sbjct: 325 SGHLKDAHEFINQMPIKPNTVIWRTLL 351
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 6/191 (3%)
Query: 427 MDKFS--FASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
+D FS FA +S+ S L+ G Q+ +G I TSLV FY G V+ R
Sbjct: 62 VDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYAR 120
Query: 485 KVFDGMI-KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
+VFD K + V W ++ Y N EA+ LF+ M + + T LSAC
Sbjct: 121 QVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADL 180
Query: 544 GLVEEGRNLFD-TMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWF 602
G V+ G ++ ++K + ++ + ++++Y ++G +A L +E + D +
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTTYT 239
Query: 603 SVLRGCIAHGN 613
S++ G +G
Sbjct: 240 SMIFGYALNGQ 250
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 47/251 (18%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ-TNAFSWNTLIEA 72
+GRQ+H K G N+ + L+ FYS G +D A Q+FDE P+ N W +I A
Sbjct: 83 DGRQIHALVRKLG-FNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISA 141
Query: 73 HLHSGHRNESLRLFHAMP-EKTH-------------------------YS---------- 96
+ + + E++ LF M EK YS
Sbjct: 142 YTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLA 201
Query: 97 -----WNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
N L++ + KSG+ + A LFD K+ + ++I GY+ G +++L LFK M
Sbjct: 202 MDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM 261
Query: 152 -SLDPLE--MVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
++D + ++ + VL AC+ + GK+ H + ++ L+ + +V
Sbjct: 262 KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMVD 320
Query: 209 FYGKCGDLDSA 219
+ + G L A
Sbjct: 321 LFCRSGHLKDA 331
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 175/649 (26%), Positives = 290/649 (44%), Gaps = 75/649 (11%)
Query: 32 LTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNESLRLFH 87
+ T N L+ SR GC A +L+ EM + +A ++ +++ E +++ H
Sbjct: 77 VVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQV-H 135
Query: 88 AMPEKTHYSWNM-----LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
+ NM LV +A + +A LFD M +N V N ++ + + G +
Sbjct: 136 CRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESK 195
Query: 143 KALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVL 202
+ ++ M L E V + ++ C+ + GKQ+H+ V+ G + + +
Sbjct: 196 RLFEVYLRMEL---EGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNIS-NIFV 251
Query: 203 CSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCA 262
+ LV +Y CGDL +G MR F++ ++
Sbjct: 252 ANVLVDYYSACGDL---------------------------SGSMRS----FNAVPEKDV 280
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
+ WNSI+S G +++L LF +M+ G + + L+ ++ KQ+H +
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 323 ACKIGV-THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
K+G + V SAL+D Y K G + + L + N+++T +CG +D
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 382 AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACAS 441
+F M + G + + LK S + +C
Sbjct: 401 IIEMFGLMIDE----------GTGIDEVTLSTV----------LKALSLSLPESLHSCTL 440
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTI 501
C AI G D +S SL+D Y K G E+ RKVFD + + +I
Sbjct: 441 VHCC---------AIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSI 491
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
+ GYA NG G++ + + REM + P +T +VLS C H+GLVEEG +FD+++ Y
Sbjct: 492 INGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYG 551
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAA 621
I+P + Y+CMVDL RAG + +A L+ + AD W S+L+ C H N TIG+ AA
Sbjct: 552 ISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAA 611
Query: 622 EKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
E ++ L+PEN YIQ+S D+E S Q+RE+ + + + G S
Sbjct: 612 EVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYS 660
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 133/592 (22%), Positives = 225/592 (38%), Gaps = 126/592 (21%)
Query: 90 PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
P Y+ N + KSG+L AH FD M ++ + +N +I G S+ G +A+ L+
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 150 TMSLDPLEMVHC----DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSS 205
EMV C A +VL C+D G QVH RVI G C+
Sbjct: 102 -------EMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFG-------CNM 147
Query: 206 LVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLW 265
V+ SALV YA + A ++FD +D+ +
Sbjct: 148 FVR--------------------------SALVGLYACLRLVDVALKLFDEMLDRNLAVC 181
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS--LLVVELVKQMHAHA 323
N ++ + GE ++ RM GV+ + T ++ GCS LV E KQ+H+
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR-GCSHDRLVYE-GKQLHSLV 239
Query: 324 CKIG-VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA 382
K G +I VA+ L+D YS CG + +
Sbjct: 240 VKSGWNISNIFVANVLVDYYSA-------------------------------CGDLSGS 268
Query: 383 KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
F+ + K +ISWNSI+ A +++D+F +M + F S ++ C+
Sbjct: 269 MRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRN 328
Query: 443 SCLELGEQVFGKAITVGLEFDHI-ISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTI 501
S ++ G+Q+ + +G + + + ++L+D Y KC +E ++ + + N++
Sbjct: 329 SDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSL 388
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD-------------------- 541
+ G + + +F M G +T + VL A
Sbjct: 389 MTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKS 448
Query: 542 -----------------HTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
+G E R +FD + P I + +++ YAR G +
Sbjct: 449 GYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD-----TPNIFCLTSIINGYARNGMGTD 503
Query: 585 AIDLIEEMP---FQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPG 633
+ ++ EM D SVL GC G G++ + + +PG
Sbjct: 504 CVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPG 555
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 139/340 (40%), Gaps = 75/340 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
R + EG+QLH +K+G S++ AN L+ +YS G L + + F+ +P+ + SWN++
Sbjct: 227 RLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSI 286
Query: 70 IEAHLHSGHRNESLRLFHAMP---------------------------EKTH-YSWNM-- 99
+ G +SL LF M ++ H Y M
Sbjct: 287 VSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 100 ----------LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFK 149
L+ + K ++ + L+ S+PC N N+++ G + + +F
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
M +D E D L+TVL A +L+ + +H+ +V C ++
Sbjct: 407 LM-ID--EGTGIDEVTLSTVLKA----LSLSLPESLHSCTLVH----------CCAIKSG 449
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
Y AA VA +L+ Y +G+ +R+VFD SII
Sbjct: 450 Y--------AADVAVSC---------SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSII 492
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
+GY NG + + + + M R + D T+ ++LS GCS
Sbjct: 493 NGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLS-GCS 531
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 215/412 (52%), Gaps = 5/412 (1%)
Query: 264 LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
++N++I Y+ GE +LALF M V + T +++ A CS V +H A
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAK 383
K G D V ++ + Y + + K F ++ + N+++ G ++ A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 384 WIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD---LKMDKFSFASVISACA 440
F M ++SW +++ G +K ++A+ +F M + + ++ +F SV+S+CA
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 441 S--KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSW 498
+ + + LG+Q+ G ++ + + T+L+D Y K G +E+ +FD + +W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 499 NTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
N I+ A+NG +AL +F M+ S V P+ IT A+L+AC + LV+ G LF ++
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 559 NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGK 618
Y I P EHY C+VDL RAG L +A + I+ +PF+ DA++ ++L C H N +G
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 619 MAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
+++I L P++ G Y+ LS A +W + ++R+ MI+ ++KIP S
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 64 FSWNTLIEAHL-----HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFD 118
F W+ ++ G S ++F + + N L+ A ++G++ A F
Sbjct: 117 FLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQ 176
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA--DC 176
MP + + W T+I+G+SK+G KAL +F M + ++ + +VL +CA D
Sbjct: 177 RMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQ 236
Query: 177 FALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSA 236
+ GKQ+H V+ + E+ L ++L+ YGK GDL+ A +
Sbjct: 237 GGIRLGKQIHGYVMSK--EIILTTTLGTALLDMYGKAGDLEMALTI-------------- 280
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD 296
FD D+ WN+IIS NG +AL +F+ M+ V +
Sbjct: 281 -----------------FDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPN 323
Query: 297 VSTVANILSAGCSLLVVELVKQMHAHAC 324
T+ IL+A +V+L Q+ + C
Sbjct: 324 GITLLAILTACARSKLVDLGIQLFSSIC 351
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 45/241 (18%)
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
KT +N+++ ++ +F M ++ + +F S+I A S + G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK------------------- 492
G+A+ G +D + TS V FY + G +E RK+FD ++
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 493 ------------TDEVSWNTILMGYATNGYGSEALTLFREM---RCSGVRPSAITFTAVL 537
TD VSW T++ G++ G ++AL +F EM + + P+ TF +VL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 538 SACDH--TGLVEEGRNLFDTMKHNYNINPEI----EHYSCMVDLYARAGCLGEAIDLIEE 591
S+C + G + G+ + H Y ++ EI + ++D+Y +AG L A+ + ++
Sbjct: 229 SSCANFDQGGIRLGKQI-----HGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ 283
Query: 592 M 592
+
Sbjct: 284 I 284
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 231/466 (49%), Gaps = 12/466 (2%)
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDS--RVDQCAVLWNSIISGY 272
+L + +G+ K + +AL YA++G+M A+++FD ++ V W +++S +
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSF 86
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
G + ++ LF MRR V D +V + L + +Q H A K+GV +
Sbjct: 87 SRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSV 146
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
V +AL+D Y K E + F EL+ + ++ +E + +F M +
Sbjct: 147 KVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPER 206
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNM-LDLKMDKFSFASVISACASKSCLELGEQV 451
++W ++ G E +++ M ++ + S++SACA L +G V
Sbjct: 207 NAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWV 266
Query: 452 ----FGKAITVGLEF---DHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMG 504
K + +G E D ++ T+LVD Y KCG ++ VF M K + V+WN + G
Sbjct: 267 HVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSG 326
Query: 505 YATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINP 564
A +G G + +F +M V+P +TFTAVLSAC H+G+V+EG F +++ Y + P
Sbjct: 327 LAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEP 384
Query: 565 EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKI 624
+++HY+CMVDL RAG + EA L+ EMP + + S+L C HG I + ++
Sbjct: 385 KVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKREL 444
Query: 625 IQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
IQ+ P N I +SN+ + + +R + + ++KIPG S
Sbjct: 445 IQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLS 490
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 197/434 (45%), Gaps = 40/434 (9%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPC--KNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
Y N L +A SG++ A LFD +P K+ + W T++ +S+ G ++ LF M
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
+E+ D + + G CA L +Q H + G+ L KV C++L+ YGK
Sbjct: 104 RKRVEI---DDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGV-LTSVKV-CNALMDMYGK 158
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
CG + R+ ++E S + ++ + R VF ++ AV W +++GY
Sbjct: 159 CGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGY 218
Query: 273 VLNGEEMEALALFKRMR-RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
+ G E L L M R G + T+ ++LSA + + + +H +A K +
Sbjct: 219 LGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEM--- 275
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT-MITVYSNCGRIEDAKWIFDTMS 390
GE +YD +++ T ++ +Y+ CG I+ + +F M
Sbjct: 276 ----------------------MMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR 313
Query: 391 SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
+ +++WN++ GLA + ID+F +M + ++K D +F +V+SAC+ ++ G +
Sbjct: 314 KRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWR 372
Query: 451 VFGKAITVGLE--FDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYAT 507
F GLE DH +VD + G +E + M + +EV ++L +
Sbjct: 373 CFHSLRFYGLEPKVDHY--ACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
Query: 508 NGYGSEALTLFREM 521
+G A + RE+
Sbjct: 431 HGKVEIAERIKREL 444
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
N L++ + G +E R+F + EK+ SW +++ K L+ +F MP +N +
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGV----LATVLGACADCFALNCG 182
W ++ GY G R+ L L M + C G+ L ++L ACA L G
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEM------VFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 183 KQVHA----RVIVEGIELEFDKVLC-SSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSAL 237
+ VH + ++ G E +D V+ ++LV Y KCG++DS+ V ++++ + + +AL
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 238 VSGYANAGKMREARRVFDSRVDQCA---VLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
SG A GK R +F + + + + +++S +G E F +R +G+
Sbjct: 324 FSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLE 383
Query: 295 GDVSTVA 301
V A
Sbjct: 384 PKVDHYA 390
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/578 (25%), Positives = 267/578 (46%), Gaps = 74/578 (12%)
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLD 154
N L+S +AK +FD M ++ + + +II+ + G +A+ L K M
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCG 214
P + L T +G+ + + HA V+V+ ++ +L ++LV Y K
Sbjct: 146 PKSELVASLLALCTRMGSSS-----KVARMFHALVLVDE-RMQESVLLSTALVDMYLK-- 197
Query: 215 DLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVL 274
DD + A VFD + V W ++ISG V
Sbjct: 198 --------------FDDHA---------------AAFHVFDQMEVKNEVSWTAMISGCVA 228
Query: 275 NGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL-LVVELVKQMHAHACKIGVTHDIV 333
N + LF+ M+R + + T+ ++L A L LVK++H
Sbjct: 229 NQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHG------------ 276
Query: 334 VASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
+S G H D L +T+Y CG + ++ +F+T +
Sbjct: 277 --------FSFRHGCHA-----------DERLTAAFMTMYCRCGNVSLSRVLFETSKVRD 317
Query: 394 LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
++ W+S++ G A+ SE +++ +M ++ + + +++SAC + + L V
Sbjct: 318 VVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHS 377
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSE 513
+ + G ++ +L+D Y KCG + R+VF + + D VSW++++ Y +G+GSE
Sbjct: 378 QILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSE 437
Query: 514 ALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMV 573
AL +F+ M G + F A+LSAC+H GLVEE + +F T Y++ +EHY+C +
Sbjct: 438 ALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYI 496
Query: 574 DLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTI-GKMAAEKIIQLDPENP 632
+L R G + +A ++ MP + A +W S+L C HG + GK+ A ++++ +P+NP
Sbjct: 497 NLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNP 556
Query: 633 GAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
Y+ LS + S ++ + +VR +M + + K G S
Sbjct: 557 ANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFS 594
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 193/487 (39%), Gaps = 118/487 (24%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G QLH LK G + +N L+ Y++ ++FDEM + S+ ++I +
Sbjct: 66 GAQLHCLCLKAGA-DCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 75 HSGHRNESL-----------------------------------RLFHAM---PEKTHYS 96
G E++ R+FHA+ E+ S
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 97 W---NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
LV + K D A +FD M KN + W +I G + + LF+ M
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCG----KQVHARVIVEGIELEFDKVLCSSLVKF 209
+ L + L +VL AC + LN G K++H G D+ L ++ +
Sbjct: 245 ENLRP---NRVTLLSVLPACVE---LNYGSSLVKEIHGFSFRHGCHA--DERLTAAFMTM 296
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSL-SALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
Y +CG++ S +RV +V D + S+++SGYA G C+
Sbjct: 297 YCRCGNV-SLSRVLFETSKVRDVVMWSSMISGYAETG--------------DCS------ 335
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
E + L +MR+ G+ + T+ I+SA + ++ +H+ K G
Sbjct: 336 -----------EVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDT 388
I++ +AL+D Y+K CG + A+ +F
Sbjct: 385 MSHILLGNALIDMYAK-------------------------------CGSLSAAREVFYE 413
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
++ K L+SW+S++ + SEA++IF M ++D +F +++SAC +E
Sbjct: 414 LTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEA 473
Query: 449 EQVFGKA 455
+ +F +A
Sbjct: 474 QTIFTQA 480
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS--FASVISACA-SKSCL 445
+SS+ + + L GL + EA+ ++ ++ + L + F+ SVI ACA +
Sbjct: 5 LSSRLNLELGNKLKGLVSDQFYDEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPF 63
Query: 446 ELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGY 505
LG Q+ + G + D ++S SL+ Y K RKVFD M+ D VS+ +I+
Sbjct: 64 LLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSC 123
Query: 506 ATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH-NYNINP 564
+G EA+ L +EM G P + ++L+ C G + +F + + +
Sbjct: 124 CQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQE 183
Query: 565 EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKI 624
+ + +VD+Y + A + ++M + + + W +++ GC+A+ N +G + +
Sbjct: 184 SVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG-VDLFRA 241
Query: 625 IQLDPENPGAYIQLSNVLATSEDWEGSAQVREL 657
+Q + P LS + A E GS+ V+E+
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKEI 274
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 11/258 (4%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
DT++ N++I++Y+ R + +FD M + +S+ SI+ ++ EA+ + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG--LEFDHIISTSLVDFYCKCGF 479
AS+++ C ++F + V ++ ++ST+LVD Y K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
VFD M +EVSW ++ G N + LFR M+ +RP+ +T +VL A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 540 CDH----TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQ 595
C + LV+E + +H + + + + + +Y R G + + L E +
Sbjct: 261 CVELNYGSSLVKEIHGF--SFRHGCHADERLT--AAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 596 ADANMWFSVLRGCIAHGN 613
D MW S++ G G+
Sbjct: 317 -DVVMWSSMISGYAETGD 333
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 176/311 (56%)
Query: 360 AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCR 419
A + L ++ +Y+ G ++ A +F ++ + LI WN+++ G + E + I+
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
M + D+++FASV AC++ LE G++ I ++ + I+ ++LVD Y KC
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
G +VFD + + ++W +++ GY +G SE L F +M+ G RP+ +TF VL+A
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Query: 540 CDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADAN 599
C+H GLV++G F +MK +Y I PE +HY+ MVD RAG L EA + + + P +
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 600 MWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMI 659
+W S+L C HGN + ++AA K ++LDP N G Y+ +N A+ E +++VR M
Sbjct: 380 VWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKME 439
Query: 660 DKNVQKIPGCS 670
+ V+K PG S
Sbjct: 440 NAGVKKDPGYS 450
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 139/346 (40%), Gaps = 66/346 (19%)
Query: 159 VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDS 218
+ + A +L C GK++HA++ V G L ++ L L+ Y GDL +
Sbjct: 104 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFAL--NEYLKVKLLILYALSGDLQT 161
Query: 219 AARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEE 278
A G++ F S + + WN++ISGYV G E
Sbjct: 162 A----GIL---------------------------FRSLKIRDLIPWNAMISGYVQKGLE 190
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASAL 338
E L ++ MR++ + D T A++ A +L +E K+ HA K + +I+V SAL
Sbjct: 191 QEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSAL 250
Query: 339 LDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWN 398
+D Y K C D +FD +S++ +I+W
Sbjct: 251 VDMYFK-------------------------------CSSFSDGHRVFDQLSTRNVITWT 279
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG-EQVFGKAIT 457
S++ G + SE + F +M + + +F V++AC ++ G E +
Sbjct: 280 SLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRD 339
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRK-VFDGMIKTDEVSWNTIL 502
G+E + ++VD + G ++ + V K W ++L
Sbjct: 340 YGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
L+ +A SGDLQ A LF S+ ++ + WN +I GY ++G ++ L ++ M + +
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN---RI 205
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
D A+V AC+ L GK+ HA +I I+ ++ S+LV Y KC
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI--IVDSALVDMYFKCSSFSDG 263
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD 255
RV + + + ++L+SGY GK+ E + F+
Sbjct: 264 HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFE 299
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
L+++ ++A ++ C + G+++ + VG + + L+ Y G ++
Sbjct: 104 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
+F + D + WN ++ GY G E L ++ +MR + + P TF +V AC
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 545 LVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSV 604
+E G+ M I I S +VD+Y + + + +++ + + W S+
Sbjct: 224 RLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSL 281
Query: 605 LRGCIAHGN 613
+ G HG
Sbjct: 282 ISGYGYHGK 290
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 263/547 (48%), Gaps = 48/547 (8%)
Query: 129 NTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHAR 188
+ +I + RG P +AL L+ + + G + +L ACA C V R
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYF----PGWVPLILRACA------C---VVPR 61
Query: 189 VIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMR 248
V++ K+L S +KF G C D+ S+L+S Y G +
Sbjct: 62 VVL-------GKLLHSESIKF-GVCSDVMVG---------------SSLISMYGKCGCVV 98
Query: 249 EARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
AR+VFD ++ WN++I GY+ NG+ + A LF+ + V + T ++
Sbjct: 99 SARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYG 155
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT 368
+ +E +++ ++ S +L Y ++ +A KFF ++ + + +
Sbjct: 156 KRIEIEKARELFERMPF--ELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSL 213
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
M++ Y G + +A+ IF + ++ L+ WN+++ G A+N +AID F M + D
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 429 KFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFD 488
+ +S++SACA L++G +V G+E + +S +L+D Y KCG +E VF+
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 489 GMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEE 548
+ N+++ A +G G EAL +F M ++P ITF AVL+AC H G + E
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME 393
Query: 549 GRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGC 608
G +F MK ++ P ++H+ C++ L R+G L EA L++EM + + + ++L C
Sbjct: 394 GLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGAC 452
Query: 609 IAHGNRTIGKMAAEKIIQLDPENPGAYIQ-----LSNVLATSEDWEGSAQVRELMIDKNV 663
H + + + KII+ +Y + +SN+ A +E W+ + +R M + +
Sbjct: 453 KVHMDTEMAEQVM-KIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGL 511
Query: 664 QKIPGCS 670
+K PG S
Sbjct: 512 EKSPGLS 518
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 156/295 (52%), Gaps = 19/295 (6%)
Query: 38 LLQFYSRRGCLDDATQLFDEMP--QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHY 95
+++ Y +R ++ A +LF+ MP N +W+ ++ ++++ ++ + F +PEK +
Sbjct: 150 MIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAF 209
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
W++++S + + GD+ A ++F + ++ ++WNT+I GY++ G+ A+ F M +
Sbjct: 210 VWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG 269
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
E DA ++++L ACA L+ G++VH+ + GIEL ++ + ++L+ Y KCGD
Sbjct: 270 YE---PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL--NQFVSNALIDMYAKCGD 324
Query: 216 LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF------DSRVDQCAVLWNSII 269
L++A V + ++++S A GK +EA +F D + D+ + +++
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFI--AVL 382
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANIL----SAGCSLLVVELVKQMH 320
+ V G ME L +F M+ V +V ++ +G LVK+MH
Sbjct: 383 TACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 183/316 (57%), Gaps = 8/316 (2%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
D+ + ++ +Y + DA+ +FD + ++ W+ ++ G + SE +++F M
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQV--FGKAITVGLEFDHIISTSLVDFYCKCGF 479
+ L+ D+FS + ++ACA L G+ + F K + +E D + T+LVD Y KCG
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS-WIESDVFVGTALVDMYAKCGC 269
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALT-LFREMRCSGVRPSAITFTAVLS 538
+E +VF + + + SW ++ GYA GY +A+T L R R G++P ++ VL+
Sbjct: 270 IETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLA 329
Query: 539 ACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA 598
AC H G +EEGR++ + M+ Y I P+ EHYSC+VDL RAG L +A++LIE+MP + A
Sbjct: 330 ACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLA 389
Query: 599 NMWFSVLRGCIAHGNRTIGKMAAEKIIQLDP----ENPGAYIQLSNVLATSEDWEGSAQV 654
++W ++L GC H N +G++A + ++ L+ E A +QLSN+ + + +++V
Sbjct: 390 SVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKV 449
Query: 655 RELMIDKNVQKIPGCS 670
R ++ + V+K PG S
Sbjct: 450 RGMIEQRGVRKTPGWS 465
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 177/460 (38%), Gaps = 83/460 (18%)
Query: 65 SWNTLIEA--------HLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDL----QL 112
SW +LI A + S H SL + H + T Y+ + L++AF +L
Sbjct: 10 SWKSLILASQRCNTVKQIKSTH---SLFIIHGLHRNT-YAISKLLTAFLHLPNLNKHFHY 65
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A S+FDS+ N V++T+I S+ P L F M + E + ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C + GKQ+H V+ G+ L D
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLS--------------------------------DSH 153
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
+ ++ Y + +AR+VFD V W+ +++GYV G E L +F+ M G
Sbjct: 154 VQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKG 213
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTHDIVVASALLDAYSKSQGPHEA 351
+ D +V L+A + + K +H K + D+ V +AL+D Y+K
Sbjct: 214 LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAK------- 266
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
CG IE A +F ++ + + SW +++ G A
Sbjct: 267 ------------------------CGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAK 302
Query: 412 EAIDIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQVF-GKAITVGLEFDHIISTS 469
+A+ R+ D +K D V++ACA LE G + + H +
Sbjct: 303 KAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSC 362
Query: 470 LVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATN 508
+VD C+ G ++ + + M +K W +L G T+
Sbjct: 363 IVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 51/249 (20%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H +K G+ S +L+ Y L DA ++FDE+PQ + W+ L+ ++
Sbjct: 135 GKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 75 HSGHRNESLRLFHAM------PEK--------------------------THYSW----- 97
G +E L +F M P++ SW
Sbjct: 195 RCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDV 254
Query: 98 ---NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
LV +AK G ++ A +F + +N W +I GY+ G+ +KA++ + + +
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERE 314
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVL----CSSLVKFY 210
+ + D+ VL VL ACA L G R ++E +E ++ S +V
Sbjct: 315 --DGIKPDSVVLLGVLAACAHGGFLEEG-----RSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 211 GKCGDLDSA 219
+ G LD A
Sbjct: 368 CRAGRLDDA 376
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 98/228 (42%), Gaps = 17/228 (7%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L +G+ +H K + S + L+ Y++ GC++ A ++F ++ + N FSW LI
Sbjct: 234 LAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIG 293
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLV-----SAFAKSGDLQLAHSLFDSMPCKNGL 126
+ G+ +++ + + + +V +A A G L+ S+ ++M + +
Sbjct: 294 GYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEI 353
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
++ I+ + G AL+L + M + PL A V +L C +
Sbjct: 354 TPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPL------ASVWGALLNGCRTHKNVEL 407
Query: 182 GK-QVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
G+ V + +E +E ++ L Y A++V G++++
Sbjct: 408 GELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQ 455
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 207/408 (50%), Gaps = 7/408 (1%)
Query: 269 ISGYVLNGEEMEALALFKRMRRH-GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
+S Y G +AL LF +M + D + L + + L +HAH+ K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIF- 386
+ V ALLD Y K A K F E+ + ++ N MI+ Y++CG++++A ++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 387 --DTMSSKTLISWNSILVGLAKNACPS-EAIDIFCRMNMLDLKMDKFSFASVISACASKS 443
D M +++ S+N+I+ GL S AI+ + +M K + + +++SAC++
Sbjct: 139 AMDVMPNES--SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG 196
Query: 444 CLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILM 503
L +++ A +E + + LV+ Y +CG + + VFD M D V+W++++
Sbjct: 197 AFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLIS 256
Query: 504 GYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNIN 563
YA +G AL F+EM + V P I F VL AC H GL +E F M+ +Y +
Sbjct: 257 AYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLR 316
Query: 564 PEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEK 623
+HYSC+VD+ +R G EA +I+ MP + A W ++L C +G + ++AA +
Sbjct: 317 ASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARE 376
Query: 624 IIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSW 671
++ ++PENP Y+ L + + E + ++R M + V+ PG SW
Sbjct: 377 LLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 168/415 (40%), Gaps = 74/415 (17%)
Query: 30 SSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLF--- 86
+ L + + L Y+ +G + A LF +M + A ++AH+ S F
Sbjct: 10 TKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALP----LDAHVFSLALKSCAAAFRPV 65
Query: 87 -----HAMPEKTHYSWN-----MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYS 136
HA K+++ N L+ + K + A LFD +P +N +VWN +I Y+
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 137 KRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIEL 196
G ++A+ L++ M + P E ++ ++G G + IE
Sbjct: 126 HCGKVKEAVELYEAMDVMPNESSF--NAIIKGLVGT-------EDGSYRAIEFYRKMIEF 176
Query: 197 EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSL-----------SALVSGYANAG 245
F L + L+ C SA ++KE+ ++ S LV Y G
Sbjct: 177 RFKPNLIT-LLALVSAC----SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCG 231
Query: 246 KMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
+ + VFDS D+ V W+S+IS Y L+G+ AL F+ M V+ D N+L
Sbjct: 232 SIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLK 291
Query: 306 AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL 365
A CS HA G+ + +V + + QG +G + D
Sbjct: 292 A-CS----------HA-----GLADEALV------YFKRMQGD------YGLRASKDH-- 321
Query: 366 LNTMITVYSNCGRIEDAKWIFDTMSSK-TLISWNSILVGLAKNACPSEAIDIFCR 419
+ ++ V S GR E+A + M K T +W ++L G +N E +I R
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL-GACRNYGEIELAEIAAR 375
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 177/309 (57%), Gaps = 8/309 (2%)
Query: 369 MITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
++ +Y + DA+ +FD + ++ W+ ++ G + SE +++F M + ++ D
Sbjct: 158 VLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPD 217
Query: 429 KFSFASVISACASKSCLELGEQV--FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
+FS + ++ACA L G+ + F K +E D + T+LVD Y KCG +E +V
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKK-KRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 487 FDGMIKTDEVSWNTILMGYATNGYGSEALT-LFREMRCSGVRPSAITFTAVLSACDHTGL 545
F+ + + + SW ++ GYA GY +A T L R R G++P ++ VL+AC H G
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVL 605
+EEGR + + M+ Y I P+ EHYSC+VDL RAG L +A+DLIE+MP + A++W ++L
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 606 RGCIAHGNRTIGKMAAEKIIQLDP----ENPGAYIQLSNVLATSEDWEGSAQVRELMIDK 661
GC H N +G++A + ++ L+ E A +QLSN+ + + + +VR ++ +
Sbjct: 397 NGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQR 456
Query: 662 NVQKIPGCS 670
++K PG S
Sbjct: 457 GIRKTPGWS 465
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 126/261 (48%), Gaps = 5/261 (1%)
Query: 382 AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM---NMLDLKMDKFSFASVISA 438
A IFD++ +++++ ++++ P + F M D+ +F +I A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 439 CASKSCLELGEQVFGKAITVGLEF-DHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVS 497
C +G+Q+ + G+ D + T ++ Y + + RKVFD + + D V
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK 557
W+ ++ GY G GSE L +F+EM G+ P + T L+AC G + +G+ + + +K
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 558 HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIG 617
I ++ + +VD+YA+ GC+ A+++ E++ + + W +++ G A+G
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT-RRNVFSWAALIGGYAAYGYAKKA 304
Query: 618 KMAAEKIIQLDPENPGAYIQL 638
++I + D P + + L
Sbjct: 305 TTCLDRIEREDGIKPDSVVLL 325
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 178/460 (38%), Gaps = 83/460 (18%)
Query: 65 SWNTLIEA--------HLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDL----QL 112
SW +LI A + S H SL + H + T Y+ + L++AF +L
Sbjct: 10 SWKSLILASQRCNTVKQIKSTH---SLFIIHGLHRNT-YAISKLLTAFLHLPNLNKHFHY 65
Query: 113 AHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGA 172
A S+FDS+ N V++T+I S+ P L F M + E + ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C + GKQ+H V+ G+ L D
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLS--------------------------------DGH 153
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
+ ++ Y + +AR+VFD V W+ +++GYV G E L +FK M G
Sbjct: 154 VQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG 213
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG-VTHDIVVASALLDAYSKSQGPHEA 351
+ D +V L+A + + K +H K + D+ V +AL+D Y+K
Sbjct: 214 IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAK------- 266
Query: 352 CKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
CG IE A +F+ ++ + + SW +++ G A
Sbjct: 267 ------------------------CGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAK 302
Query: 412 EAIDIFCRMNMLD-LKMDKFSFASVISACASKSCLELGEQVF-GKAITVGLEFDHIISTS 469
+A R+ D +K D V++ACA LE G + G+ H +
Sbjct: 303 KATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSC 362
Query: 470 LVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATN 508
+VD C+ G ++ + + M +K W +L G T+
Sbjct: 363 IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G+Q+H +K G+ S +L+ Y L DA ++FDE+PQ + W+ L+ ++
Sbjct: 135 GKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 75 HSGHRNESLRLFHAM----PEKTHYS------------------W--------------- 97
G +E L +F M E +S W
Sbjct: 195 RCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDV 254
Query: 98 ---NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
LV +AK G ++ A +F+ + +N W +I GY+ G+ +KA T LD
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKA-----TTCLD 309
Query: 155 PLEM---VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVL----CSSLV 207
+E + D+ VL VL ACA L G R ++E +E + S +V
Sbjct: 310 RIEREDGIKPDSVVLLGVLAACAHGGFLEEG-----RTMLENMEARYGITPKHEHYSCIV 364
Query: 208 KFYGKCGDLDSA 219
+ G LD A
Sbjct: 365 DLMCRAGRLDDA 376
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 16/172 (9%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
L +G+ +H K + S + L+ Y++ GC++ A ++F+++ + N FSW LI
Sbjct: 234 LAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIG 293
Query: 72 AHLHSGHRNESLRLFHAMPEKTHYSWNMLV-----SAFAKSGDLQLAHSLFDSMPCKNGL 126
+ G+ ++ + + + +V +A A G L+ ++ ++M + G+
Sbjct: 294 GYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGI 353
Query: 127 V-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
++ I+ + G AL L + M + PL A V +L C
Sbjct: 354 TPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPL------ASVWGALLNGC 399
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/549 (26%), Positives = 248/549 (45%), Gaps = 74/549 (13%)
Query: 69 LIEAHLHSGHRNESLRLFHAMP-----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK 123
L+ L S + ++ HAM ++ Y N L+S+ + GDL A +FDSMP K
Sbjct: 87 LLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEK 146
Query: 124 NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGK 183
N + W +I GY K G +A +LF+ + + + +L C+ G+
Sbjct: 147 NTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT--NERMFVCLLNLCSRRAEFELGR 204
Query: 184 QVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYAN 243
QVH ++ G+ + ++ SSLV FY +CG+L SA R +++E D S
Sbjct: 205 QVHGNMVKVGVG---NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVIS---------- 251
Query: 244 AGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANI 303
W ++IS G ++A+ +F M H + TV +I
Sbjct: 252 ---------------------WTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSI 290
Query: 304 LSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT 363
L A + +Q+H+ K + D+ V ++L+D Y+K
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAK------------------- 331
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
CG I D + +FD MS++ ++W SI+ A+ EAI +F M
Sbjct: 332 ------------CGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR 379
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
L + + S++ AC S L LG+++ + I +E + I ++LV YCKCG
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
V + D VSW ++ G ++ G+ SEAL +EM GV P+ T+++ L AC ++
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFS 603
+ GR++ K N+ ++ + S ++ +YA+ G + EA + + MP + + W +
Sbjct: 500 ESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKA 557
Query: 604 VLRGCIAHG 612
++ G +G
Sbjct: 558 MIMGYARNG 566
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 237/555 (42%), Gaps = 112/555 (20%)
Query: 35 ANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFH------- 87
N L+ R G L A ++FD MP+ N +W +I+ +L G +E+ LF
Sbjct: 120 GNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGI 179
Query: 88 ---------------------AMPEKTHYSW------NMLVSA-----FAKSGDLQLAHS 115
+ + H + N++V + +A+ G+L A
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALR 239
Query: 116 LFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS---LDPLEMVHCDAGVLATVLGA 172
FD M K+ + W +I S++GH KA+ +F M P E C ++L A
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVC------SILKA 293
Query: 173 CADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDF 232
C++ AL G+QVH+ V+ I+ D + +SL+ Y KC
Sbjct: 294 CSEEKALRFGRQVHSLVVKRMIKT--DVFVGTSLMDMYAKC------------------- 332
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
G++ + R+VFD ++ V W SII+ + G EA++LF+ M+R
Sbjct: 333 ------------GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
+ + TV +IL A S+ + L K++HA K + ++ + S
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS---------------- 424
Query: 353 KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
T++ +Y CG DA + + S+ ++SW +++ G + SE
Sbjct: 425 ---------------TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESE 469
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
A+D M ++ + F+++S + ACA+ L +G + A + + ++L+
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y KCGFV +VFD M + + VSW ++MGYA NG+ EAL L M G
Sbjct: 530 MYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI 589
Query: 533 FTAVLSACDHTGLVE 547
F +LS C L E
Sbjct: 590 FATILSTCGDIELDE 604
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 133/335 (39%), Gaps = 76/335 (22%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTL 69
+ LR GRQ+H S + ++ + + L+ Y++ G + D ++FD M N +W ++
Sbjct: 298 KALRFGRQVH-SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 70 IEAHLHSGHRNESLRLFHAMP--------------------------------------- 90
I AH G E++ LF M
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 91 EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKT 150
EK Y + LV + K G+ + A ++ +P ++ + W +I G S GH +AL K
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M E V + ++ L ACA+ +L G+ +H
Sbjct: 477 M---IQEGVEPNPFTYSSALKACANSESLLIGRSIH------------------------ 509
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
S A+ + V F SAL+ YA G + EA RVFDS ++ V W ++I
Sbjct: 510 -------SIAKKNHALSNV--FVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIM 560
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
GY NG EAL L RM G D A ILS
Sbjct: 561 GYARNGFCREALKLMYRMEAEGFEVDDYIFATILS 595
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 222/493 (45%), Gaps = 38/493 (7%)
Query: 184 QVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYAN 243
QVHAR+I G +D L+K + GD S VS Y +
Sbjct: 40 QVHARLITSGNF--WDSSWAIRLLKSSSRFGDS------------------SYTVSIYRS 79
Query: 244 AGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANI 303
GK+ CA N + Y+++ +AL + + R G D T ++
Sbjct: 80 IGKL------------YCA---NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSL 124
Query: 304 LSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT 363
+S V+ K H A K G + V ++L+ Y+ A K F E+ D
Sbjct: 125 ISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDI 184
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
+ N++I G + A +FD M K +ISWN ++ P +I +F M
Sbjct: 185 VSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRA 244
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
+ ++ + +++AC + L+ G V I L +I T+L+D Y KC V +
Sbjct: 245 GFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLA 304
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
R++FD + ++V+WN +++ + +G L LF M +RP +TF VL C
Sbjct: 305 RRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARA 364
Query: 544 GLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMP---FQADANM 600
GLV +G++ + M + I P H CM +LY+ AG EA + ++ +P ++
Sbjct: 365 GLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTK 424
Query: 601 WFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMID 660
W ++L GN T+G+ A+ +I+ DP N Y L N+ + + WE +VRE++ +
Sbjct: 425 WANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKE 484
Query: 661 KNVQKIPGCSWAD 673
+ + +IPGC D
Sbjct: 485 RKIGRIPGCGLVD 497
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 37/243 (15%)
Query: 67 NTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL 126
N+L+ + G + + +LF +P++ SWN +++ ++GD+ AH LFD MP KN +
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVH 186
WN +I Y +P ++SLF+ M + + L +L AC L G+ VH
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQ---GNESTLVLLLNACGRSARLKEGRSVH 273
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
A +I L V+ ++L+ YGKC KEV
Sbjct: 274 ASLI--RTFLNSSVVIDTALIDMYGKC-------------KEVG---------------- 302
Query: 247 MREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
ARR+FDS + V WN +I + L+G L LF+ M + D T +L
Sbjct: 303 --LARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVL-C 359
Query: 307 GCS 309
GC+
Sbjct: 360 GCA 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 24/238 (10%)
Query: 5 LQGIGRT--LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
L GR+ L+EGR +H S ++T LNSS+ L+ Y + + A ++FD + N
Sbjct: 257 LNACGRSARLKEGRSVHASLIRT-FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRN 315
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSL 116
+WN +I AH G L LF AM P++ + ++ A++G + S
Sbjct: 316 KVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVG--VLCGCARAGLVSQGQSY 373
Query: 117 FDSM------PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
+ M G W + + YS G P +A K + P E V ++ A +L
Sbjct: 374 YSLMVDEFQIKPNFGHQW-CMANLYSSAGFPEEAEEALKNL---PDEDVTPESTKWANLL 429
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE 228
+ G+ + A+ ++E L + L+ Y G + RV +VKE
Sbjct: 430 SSSRFTGNPTLGESI-AKSLIETDPLNYKYY--HLLMNIYSVTGRWEDVNRVREMVKE 484
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 243/508 (47%), Gaps = 40/508 (7%)
Query: 206 LVKFYGKCGDLDSAARVAGVVKE---VDDFSLS-ALVSGYANAGKMREARRVFDSRVDQC 261
L++ G G + ++ G V + V + LS +L+ Y + + +A +VFD D
Sbjct: 61 LLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPD 120
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
+ WNS++SGYV +G E + LF + R V + + L+A L + L +H+
Sbjct: 121 VISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHS 180
Query: 322 HACKIGVTH-DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIE 380
K+G+ ++VV + L+D Y K +A F ++ DT+ N ++ S G++E
Sbjct: 181 KLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLE 240
Query: 381 DAKWIF------DTMSSKTLI-------------------------SWNSILVGLAKNAC 409
W F DT++ LI SWN+IL G +
Sbjct: 241 LGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEK 300
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
EA + F +M+ ++ D++S + V++A A+ + + G + A +GL+ +++++
Sbjct: 301 SGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASA 360
Query: 470 LVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG-VRP 528
L+D Y KCG ++ +F M + + + WN ++ GYA NG EA+ LF +++ ++P
Sbjct: 361 LIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKP 420
Query: 529 SAITFTAVLSACDHTGL-VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAID 587
TF +L+ C H + +E F+ M + Y I P +EH ++ + G + +A
Sbjct: 421 DRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQ 480
Query: 588 LIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA--YIQLSNVLATS 645
+I+E F D W ++L C A + K A K+I+L + YI +SN+ A
Sbjct: 481 VIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYH 540
Query: 646 EDWEGSAQVRELMIDKNVQKIPGCSWAD 673
E W Q+R++M + V K G SW D
Sbjct: 541 ERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 175/386 (45%), Gaps = 68/386 (17%)
Query: 87 HAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALS 146
H T S N L+ + S L+ AH +FD MP + + WN+++ GY + G ++ +
Sbjct: 84 HGFVSNTRLS-NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 147 LFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
LF + V + L ACA G +H++++ G+E + + V+ + L
Sbjct: 143 LFLELHRSD---VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLE-KGNVVVGNCL 198
Query: 207 VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVS--------------------------- 239
+ YGKCG +D A V ++E D S +A+V+
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYN 258
Query: 240 ----GYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
+ +G A +V + + WN+I++GYV + + EA F +M GV
Sbjct: 259 ELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF 318
Query: 296 DVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFF 355
D +++ +L+A +L VV +HA A K+G+ +VVASAL+D YSK
Sbjct: 319 DEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSK----------- 367
Query: 356 GELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAID 415
CG ++ A+ +F TM K LI WN ++ G A+N EAI
Sbjct: 368 --------------------CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 416 IFCRMNMLD-LKMDKFSFASVISACA 440
+F ++ LK D+F+F ++++ C+
Sbjct: 408 LFNQLKQERFLKPDRFTFLNLLAVCS 433
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 109/241 (45%), Gaps = 5/241 (2%)
Query: 15 GRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHL 74
G +H +K G+ ++ N L+ Y + G +DDA +F M + + SWN ++ +
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 75 HSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHG 134
+G L FH MP ++N L+ AF KSGD A + MP N WNTI+ G
Sbjct: 235 RNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTG 294
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI 194
Y +A F M V D L+ VL A A + G +HA +
Sbjct: 295 YVNSEKSGEATEFFTKMHSSG---VRFDEYSLSIVLAAVAALAVVPWGSLIHA--CAHKL 349
Query: 195 ELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
L+ V+ S+L+ Y KCG L A + + + + ++SGYA G EA ++F
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLF 409
Query: 255 D 255
+
Sbjct: 410 N 410
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 426 KMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRK 485
K D ++ + + L Q+ G G + +S SL+ FY +E K
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 486 VFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
VFD M D +SWN+++ GY +G E + LF E+ S V P+ +FTA L+AC L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVL 605
G + + + +C++D+Y + G + +A+ + + M + D W +++
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIV 230
Query: 606 RGCIAHGNRTIGKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
C +G +G Q+ + Y +L + S D+ + QV M + N
Sbjct: 231 ASCSRNGKLELGLWFFH---QMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPN 284
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 210/417 (50%), Gaps = 45/417 (10%)
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSG------DVSTVANILSAGCSLLVVELVKQ 318
WN+II G+ + A + ++ M + S D T + L A L + Q
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 319 MHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGR 378
+H + G++ D ++ + LLDAYSK+ +I+ Y
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKN---------------------GDLISAYK---- 165
Query: 379 IEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISA 438
+FD M + + SWN+++ GL SEA++++ RM ++ + + + + A
Sbjct: 166 ------LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGA 219
Query: 439 CASKSCLELGEQVFGKAITVGLEFDH-IISTSLVDFYCKCGFVEIGRKVFDGMI-KTDEV 496
C+ ++ GE +F G D+ I+S + +D Y KCGFV+ +VF+ K V
Sbjct: 220 CSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVV 274
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
+WNT++ G+A +G AL +F ++ +G++P +++ A L+AC H GLVE G ++F+ M
Sbjct: 275 TWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM 334
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTI 616
+ ++HY C+VDL +RAG L EA D+I M D +W S+L + + +
Sbjct: 335 ACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEM 393
Query: 617 GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCSWAD 673
++A+ +I ++ N G ++ LSNV A W+ +VR+ M K V+KIPG S+ +
Sbjct: 394 AEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIE 450
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 164/405 (40%), Gaps = 73/405 (18%)
Query: 103 AFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMV 159
A + GDL A +F +P WN II G++ HP A S +++M S +
Sbjct: 46 AISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAIC 105
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA 219
DA + L ACA + Q+H ++ G L D +LC++L+ Y K GD
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRG--LSADSLLCTTLLDAYSKNGD---- 159
Query: 220 ARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEM 279
L+S Y ++FD + WN++I+G V
Sbjct: 160 -----------------LISAY----------KLFDEMPVRDVASWNALIAGLVSGNRAS 192
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
EA+ L+KRM G+ TV L A CS L D+ +
Sbjct: 193 EAMELYKRMETEGIRRSEVTVVAALGA-CSHL------------------GDVKEGENIF 233
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS-SKTLISWN 398
YS + I+ N I +YS CG ++ A +F+ + K++++WN
Sbjct: 234 HGYSND----------------NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWN 277
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV 458
+++ G A + A++IF ++ +K D S+ + ++AC +E G VF
Sbjct: 278 TMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK 337
Query: 459 GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTIL 502
G+E + +VD + G + + M + D V W ++L
Sbjct: 338 GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 11/242 (4%)
Query: 377 GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDL------KMDKF 430
G + A IF + WN+I+ G A ++ PS A + M ++D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
+ + + ACA C +Q+ + GL D ++ T+L+D Y K G + K+FD M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 491 IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGR 550
D SWN ++ G + SEA+ L++ M G+R S +T A L AC H G V+EG
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 551 NLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIA 610
N+F H Y+ N + + +D+Y++ G + +A + E+ + W +++ G
Sbjct: 231 NIF----HGYS-NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 611 HG 612
HG
Sbjct: 286 HG 287
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 177/464 (38%), Gaps = 128/464 (27%)
Query: 16 RQLHVSFLKTGILNSSLTTANRLLQ--FYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
+QL FL G SS + RLL+ S G L A Q+F +P+ WN +I
Sbjct: 20 KQLQSHFLTAGHFQSSFLRS-RLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGF 78
Query: 74 LHSGHRNESLRLFHAM---------------------------------PEKTHYSWN-- 98
S H + + + +M ++ H N
Sbjct: 79 AGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRR 138
Query: 99 ----------MLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLF 148
L+ A++K+GDL A+ LFD MP ++ WN +I G +A+ L+
Sbjct: 139 GLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELY 198
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
K M + + + V+A LGAC+ + G+ + + + ++ ++ +
Sbjct: 199 KRMETEGIR--RSEVTVVAA-LGACSHLGDVKEGENIFHGYSNDNV------IVSNAAID 249
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSI 268
Y KCG +D A +V + F+ GK + V WN++
Sbjct: 250 MYSKCGFVDKAYQV------FEQFT-----------GK-------------KSVVTWNTM 279
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVS-GDVSTVA-------------------------- 301
I+G+ ++GE AL +F ++ +G+ DVS +A
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 302 --NILSAGCSLLVVEL------VKQMHAHACKIGVTHDIVVASALLDA---YSKSQGPHE 350
N+ GC VV+L +++ H C + + D V+ +LL A YS +
Sbjct: 340 ERNMKHYGC---VVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEI 396
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
A + E+ + + VY+ GR +D + D M SK +
Sbjct: 397 ASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 184/375 (49%), Gaps = 2/375 (0%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
D + L+S ++ G+ + A VF+ WN +I +N + EAL LF M
Sbjct: 51 DQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 110
Query: 290 -RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
H D T ++ A + + L Q+H A K G +D+ + L+D Y K P
Sbjct: 111 ISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKP 170
Query: 349 HEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNA 408
K F ++ + TM+ + +++ A+ +F+ M + ++SW +++ KN
Sbjct: 171 DSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNR 230
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIST 468
P EA +F RM + D+K ++F+ +++ A L +G V A G D + T
Sbjct: 231 RPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGT 290
Query: 469 SLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLF-REMRCSGVR 527
+L+D Y KCG ++ RKVFD M +WN+++ +G G EAL+LF + V
Sbjct: 291 ALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVE 350
Query: 528 PSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAID 587
P AITF VLSAC +TG V++G F M Y I+P EH +CM+ L +A + +A +
Sbjct: 351 PDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASN 410
Query: 588 LIEEMPFQADANMWF 602
L+E M D N F
Sbjct: 411 LVESMDSDPDFNSSF 425
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 163/361 (45%), Gaps = 38/361 (10%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMV 159
L+S + G+ Q A +F+ + + WN +I S PR+AL LF M +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMIS--HQS 115
Query: 160 HCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC-SSLVKFYGKCGDLDS 218
D V+ AC ++ G QVH I G F+ V ++L+ Y KCG DS
Sbjct: 116 QFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGF---FNDVFFQNTLMDLYFKCGKPDS 172
Query: 219 AARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEE 278
+V + S + ++ G + ++ A VF+ + V W ++I+ YV N
Sbjct: 173 GRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRP 232
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASAL 338
EA LF+RM+ V + T+ N+L A L + + + +H +A K G D + +AL
Sbjct: 233 DEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTAL 292
Query: 339 LDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWN 398
+D YSK CG ++DA+ +FD M K+L +WN
Sbjct: 293 IDMYSK-------------------------------CGSLQDARKVFDVMQGKSLATWN 321
Query: 399 SILVGLAKNACPSEAIDIFCRMNML-DLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
S++ L + C EA+ +F M ++ D +F V+SACA+ ++ G + F + I
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 458 V 458
V
Sbjct: 382 V 382
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 138/329 (41%), Gaps = 65/329 (19%)
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSN 375
+KQ+H K +T+ D +L+ +I+V S+
Sbjct: 36 LKQIHTKIIKHNLTN-------------------------------DQLLVRQLISVSSS 64
Query: 376 CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNML-DLKMDKFSFAS 434
G + A +F+ + S + +WN ++ L+ N P EA+ +F M + + DKF+F
Sbjct: 65 FGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPF 124
Query: 435 VISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTD 494
VI AC + S + LG QV G AI G D +L+D Y KCG + GRKVFD M
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 495 EVSWNTILMG-------------------------------YATNGYGSEALTLFREMRC 523
VSW T+L G Y N EA LFR M+
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 524 SGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLG 583
V+P+ T +L A G + GR + D H + + ++D+Y++ G L
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHD-YAHKNGFVLDCFLGTALIDMYSKCGSLQ 303
Query: 584 EAIDLIEEMPFQADANMWFSVLRGCIAHG 612
+A + + M ++ A W S++ HG
Sbjct: 304 DARKVFDVMQGKSLAT-WNSMITSLGVHG 331
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 37/246 (15%)
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP 121
+ F NTL++ + G + ++F MP ++ SW ++ + L A +F+ MP
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 122 CKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
+N + W +I Y K P +A LF+ M +D V + + +L A +L+
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD---VKPNEFTIVNLLQASTQLGSLSM 269
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGY 241
G+ VH G L D L ++L+ Y KCG L
Sbjct: 270 GRWVHDYAHKNGFVL--DCFLGTALIDMYSKCGSL------------------------- 302
Query: 242 ANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTV 300
++AR+VFD + WNS+I+ ++G EAL+LF+ M V D T
Sbjct: 303 ------QDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITF 356
Query: 301 ANILSA 306
+LSA
Sbjct: 357 VGVLSA 362
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 198/411 (48%), Gaps = 41/411 (9%)
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHG-VSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
WN II + +G +++ LF RM R V D T+ IL A + + +H
Sbjct: 101 WNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLC 160
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAK 383
K+G + + V+SAL + +Y + G++ A+
Sbjct: 161 LKLGFSSSLFVSSAL-------------------------------VIMYVDMGKLLHAR 189
Query: 384 WIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKS 443
+FD M + + + ++ G + + +F M +D S++ AC
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 444 CLELGEQVFGKAIT----VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWN 499
L+ G+ V G I +GL + I+ D Y KC ++ VF M + D +SW+
Sbjct: 250 ALKHGKSVHGWCIRRCSCLGLNLGNAIT----DMYVKCSILDYAHTVFVNMSRRDVISWS 305
Query: 500 TILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHN 559
++++GY +G + LF EM G+ P+A+TF VLSAC H GLVE+ F M+
Sbjct: 306 SLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-E 364
Query: 560 YNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKM 619
YNI PE++HY+ + D +RAG L EA +E+MP + D + +VL GC +GN +G+
Sbjct: 365 YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGER 424
Query: 620 AAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
A ++IQL P Y+ L+ + + + ++ + +R+ M +K + K+PGCS
Sbjct: 425 VARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 183/465 (39%), Gaps = 75/465 (16%)
Query: 100 LVSAFAKSGDL-QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEM 158
LV A++K L + S+F MP +N WN II +S+ G K++ LF M +
Sbjct: 72 LVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRE--SC 129
Query: 159 VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDS 218
V D L +L AC+ G +H VLC L G L
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIH--------------VLCLKL----GFSSSL-- 169
Query: 219 AARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEE 278
F SALV Y + GK+ AR++FD + +VL+ ++ GYV GE
Sbjct: 170 -------------FVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEA 216
Query: 279 MEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASAL 338
M LA+F+ M G + D + ++L A L ++ K +H + + + +A+
Sbjct: 217 MLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAI 276
Query: 339 LDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWN 398
D Y K C ++ A +F MS + +ISW+
Sbjct: 277 TDMYVK-------------------------------CSILDYAHTVFVNMSRRDVISWS 305
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG--KAI 456
S+++G + + +F M ++ + +F V+SACA +E F +
Sbjct: 306 SLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEY 365
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDEVSWNTILMGYATNGYGSEAL 515
+ E H S+ D + G +E K + M +K DE +L G G
Sbjct: 366 NIVPELKHY--ASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 516 TLFREMRCSGVRPSAITFTAVLSAC-DHTGLVEEGRNLFDTMKHN 559
+ RE+ ++P ++ L+ G +E +L MK
Sbjct: 424 RVAREL--IQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEK 466
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 56/416 (13%)
Query: 27 ILNSSLTTANRLLQFYSRRGCL-DDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRL 85
L S++ +++L+ YS+ L + +F MP N FSWN +I SG ++S+ L
Sbjct: 61 FLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDL 120
Query: 86 F-----------------------------------HAMPEKTHYSWNMLVSA-----FA 105
F H + K +S ++ VS+ +
Sbjct: 121 FLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 106 KSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGV 165
G L A LFD MP ++ +++ + GY ++G L++F+ M + D+ V
Sbjct: 181 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFAL---DSVV 237
Query: 166 LATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
+ ++L AC AL GK VH I L + L +++ Y KC LD A V
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFVN 295
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSR----VDQCAVLWNSIISGYVLNGEEMEA 281
+ D S S+L+ GY G + + ++FD ++ AV + ++S G ++
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 282 LALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDA 341
F+ M+ + + ++ A++ A C + L+++ + V D V A+L
Sbjct: 356 WLYFRLMQEYNIVPELKHYASV--ADC-MSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSG 412
Query: 342 ---YSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
Y + + +LK T+ +YS GR ++A+ + M K +
Sbjct: 413 CKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQI 468
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 2/193 (1%)
Query: 362 DTILLNTMITVYSNCGRIEDAKW-IFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
+ +L + ++ YS + +F M + + SWN I+ +++ S++ID+F RM
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 421 NMLD-LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
++ D F+ ++ AC++ + G+ + + +G +S++LV Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 480 VEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+ RK+FD M D V + + GY G L +FREM SG ++ ++L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 540 CDHTGLVEEGRNL 552
C G ++ G+++
Sbjct: 245 CGQLGALKHGKSV 257
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 189/351 (53%), Gaps = 5/351 (1%)
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKW 384
K+G + V +AL+ Y +A K F E+ + + N MIT +N G E A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 385 IFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLD-LKMDKFSFASVISACASKS 443
+ M ++T++SW +I+ G A+ P EAI +F RM D +K ++ + +++ A +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 444 CLELGEQVFGKAITVG-LEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI--KTDEVSWNT 500
L++ V G + D ++ SL+D Y KCG ++ K F + + + VSW T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 501 ILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG-RNLFDTMKHN 559
++ +A +G G EA+++F++M G++P+ +T +VL+AC H GL EE F+TM +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 560 YNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKM 619
Y I P+++HY C+VD+ R G L EA + E+P + A +W +L C + + + +
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 620 AAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQKIPGCS 670
K+++L+ + G Y+ +SN+ + + + + R+ M + V K+PG S
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 50/333 (15%)
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDS 119
+++ + L+ +L G+ ++ ++F MPE+ +WN++++ GD + A +
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 120 MPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDA------GVLATVLGAC 173
MP + + W TII GY++ P++A+ LF MV CDA +LA +L A
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFS-------RMVACDAIKPNEITILA-ILPAV 266
Query: 174 ADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFS 233
+ L VHA V G + D + +SL+ Y KCG + SA +
Sbjct: 267 WNLGDLKMCGSVHAYVGKRGF-VPCDIRVTNSLIDAYAKCGCIQSAFKF----------- 314
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGV 293
+ +G N V W ++IS + ++G EA+++FK M R G+
Sbjct: 315 FIEIPNGRKN------------------LVSWTTMISAFAIHGMGKEAVSMFKDMERLGL 356
Query: 294 SGDVSTVANILSAGCS---LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
+ T+ ++L+A CS L E ++ + + +T D+ L+D + E
Sbjct: 357 KPNRVTMISVLNA-CSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEE 415
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAK 383
A K E+ + ++ M+ C +DA+
Sbjct: 416 AEKIALEIPIEEKAVVWRMLL--GACSVYDDAE 446
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 204 SSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAV 263
++LV Y G++ A +V + E + + + +++G N G +A + ++ V
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 264 LWNSIISGYVLNGEEMEALALFKRMRR-HGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
W +II GY + EA+ LF RM + + T+ IL A +L +++ +HA+
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 323 ACKIG-VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
K G V DI V ++L+DAY+K A KFF E+ GR
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPN----------------GR--- 322
Query: 382 AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA 440
K L+SW +++ A + EA+ +F M L LK ++ + SV++AC+
Sbjct: 323 ----------KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACS 371
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 173/329 (52%), Gaps = 17/329 (5%)
Query: 361 YDTILL-NTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAK-----NACPSEAI 414
Y++ L+ T++ Y+ G + A+ +FD M +T ++WN+++ G N +A+
Sbjct: 144 YESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAM 203
Query: 415 DIFCRMNMLD--LKMDKFSFASVISACASKSCLELGEQVFGKAITVGL--EFDHIISTSL 470
+F R + ++ + V+SA + LE+G V G +G E D I T+L
Sbjct: 204 VLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTAL 263
Query: 471 VDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSA 530
VD Y KCG + VF+ M + +W ++ G A NG G+E L M SG++P+
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNE 323
Query: 531 ITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIE 590
ITFT++LSA H GLVEEG LF +MK + + P IEHY C+VDL +AG + EA I
Sbjct: 324 ITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFIL 383
Query: 591 EMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPGA-------YIQLSNVLA 643
MP + DA + S+ C +G +G+ + +++++ E+ Y+ LSNVLA
Sbjct: 384 AMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLA 443
Query: 644 TSEDWEGSAQVRELMIDKNVQKIPGCSWA 672
W ++R+ M ++ ++ PG S+
Sbjct: 444 HKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 29/233 (12%)
Query: 84 RLFHAMPEKTHYSW------NMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGY-- 135
R+ H M +K + + L+ +AK+GDL+ A +FD MP + + WN +I GY
Sbjct: 131 RIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCS 190
Query: 136 --SKRGH-PRKALSLFKTMSLDPLEMVHCDAGVLAT------VLGACADCFALNCGKQVH 186
K H RKA+ LF+ S C +GV T VL A + L G VH
Sbjct: 191 HKDKGNHNARKAMVLFRRFSC-------CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 187 ARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGK 246
+ G E D + ++LV Y KCG L++A V ++K + F+ +++ +G A G+
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 247 MREA----RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR-RHGVS 294
E R+ +S + + + S++S Y G E + LFK M+ R GV+
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVT 356
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 49/292 (16%)
Query: 222 VAGVVKEVDDFSLSALVSG-----YANAGKMREARRVFDSRVDQCAVLWNSIISGYVL-- 274
V G+VK++ S L+ YA G +R AR+VFD ++ +V WN++I GY
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 275 ---NGEEMEALALFKRMR--RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
N +A+ LF+R GV +T+ +LSA ++E+ +H + K+G T
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 330 H--DIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFD 387
D+ + +AL+D YSK CG + +A +F+
Sbjct: 253 PEVDVFIGTALVDMYSK-------------------------------CGCLNNAFSVFE 281
Query: 388 TMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
M K + +W S+ GLA N +E ++ RM +K ++ +F S++SA +E
Sbjct: 282 LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEE 341
Query: 448 GEQVFGKAITVGLEFDHIIS--TSLVDFYCKCGFVEIGRKVFDGM-IKTDEV 496
G ++F K++ +I +VD K G ++ + M IK D +
Sbjct: 342 GIELF-KSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI 392
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIE 71
LR GR +H K G L S LL FY++ G L A ++FDEMP+ + +WN +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 72 ---AHLHSGHRN--ESLRLFHAMP------EKTHYSWNMLVSAFAKSGDLQ---LAHSLF 117
+H G+ N +++ LF T + ++SA +++G L+ L H
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 118 DSM---PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
+ + P + + ++ YSK G A S+F+ M +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKV 285
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPE----KT 93
L+ YS+ GCL++A +F+ M N F+W ++ +G NE+ L + M E
Sbjct: 263 LVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPN 322
Query: 94 HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHGYSKRGHPRKALSLF 148
++ L+SA+ G ++ LF SM + G+ + I+ K G ++A
Sbjct: 323 EITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFI 382
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACA 174
M + P DA +L ++ AC+
Sbjct: 383 LAMPIKP------DAILLRSLCNACS 402
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/624 (22%), Positives = 277/624 (44%), Gaps = 96/624 (15%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQTNAF-----SWNTLIEAHLHSGHRNESL--RLFHAMP 90
+++ YSR +D A + + Q + F S+N +++A + S RN S +F M
Sbjct: 140 VVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRS-KRNISFAENVFKEML 197
Query: 91 E----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPR 142
E +++N+L+ F +G++ +A +LFD M K N + +NT+I GY K
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 143 KALSLFKTMSLDPLE--------MVH--CDAGVLATV---------LGACADCFALN--- 180
L ++M+L LE +++ C G + V G D N
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 181 ---CGKQ-------VHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA------RVAG 224
C + +HA ++ G L + +SL+ K G+++ A RV G
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHG--LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 225 VVKEVDDFSLSALVSGYANAGKMREARRVF----DSRVDQCAVLWNSIISGYVLNGEEME 280
+ ++ + + LV G++ G M EA RV D+ V +N++I+G+ + G+ +
Sbjct: 376 LCP--NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
A+A+ + M+ G+S DV + + +LS C V+ ++ + G+ D + S+L+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 341 AYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSK---- 392
+ + + EAC + E+ D +I Y G +E A + + M K
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+++++ ++ GL K + EA + ++ + ++ ++I C++
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN----------- 602
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI----KTDEVSWNTILMGYATN 508
+EF ++ SL+ +C G + +VF+ M+ K D ++N ++ G+
Sbjct: 603 -------IEFKSVV--SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
G +A TL++EM SG +T A++ A G V E ++ + + ++ E E
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQ 712
Query: 569 YSCMVDLYARAGCLGEAIDLIEEM 592
+V++ R G + +D++ EM
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEM 736
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/605 (23%), Positives = 253/605 (41%), Gaps = 77/605 (12%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMP---CKNGLV-WNTIIHGYSKRGHP-RKALSLFK 149
YS+ L+SAFA SG + A ++F M CK L+ +N I++ + K G P K SL +
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKF 209
M D + DA T++ C QV + G +DKV ++L+
Sbjct: 269 KMKSDG---IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG--FSYDKVTYNALLDV 323
Query: 210 YGKCGDLDSAARVAGVVKEVDDFSLS-----ALVSGYANAGKMREARRVFDSRVDQCA-- 262
YGK A +V + ++ FS S +L+S YA G + EA + + ++
Sbjct: 324 YGKSHRPKEAMKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 263 --VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTV-ANILSAGCSLLVVELVKQM 319
+ +++SG+ G+ A+++F+ MR G ++ T A I G E++K
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 320 -HAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTI----LLNTMITVYS 374
+ C G++ DIV + LL + ++ E F E+K + NT+I+ YS
Sbjct: 443 DEINVC--GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 375 NCGRIEDAKWIFDTM----SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
CG E A ++ M + L ++N++L LA+ ++ + M K ++
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 431 SFASVISA-----------------------------------CASKSCLELGEQVFGKA 455
++ S++ A C+ L E+ F +
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYG 511
G D S+V Y + V V D M ++N+++ ++ +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSA-CDHTGLVEEGRNLFDTMKHNYNINPEIEHYS 570
++ + RE+ G++P I++ V+ A C +T + + R +F M+ N I P++ Y+
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR-IFSEMR-NSGIVPDVITYN 738
Query: 571 CMVDLYARAGCLGEAIDLIEEM---PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQL 627
+ YA EAI ++ M + + N + S++ G + K+ E + L
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Query: 628 DPENP 632
DP P
Sbjct: 799 DPHAP 803
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 190/417 (45%), Gaps = 59/417 (14%)
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARVAGVVKE----VDDFSLSALVSGYANAGKMREARRV 253
D + + ++ GK G + SAA + ++E +D +S ++L+S +AN+G+ REA V
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 254 FDS-RVDQCA---VLWNSIISGYVLNGEEMEAL-ALFKRMRRHGVSGDVSTVANILSAGC 308
F D C + +N I++ + G + +L ++M+ G++ D T +++
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-- 288
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA----YDTI 364
CK G H EA + F E+KA YD +
Sbjct: 289 ---------------CKRGSLH------------------QEAAQVFEEMKAAGFSYDKV 315
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMS----SKTLISWNSILVGLAKNACPSEAIDIFCRM 420
N ++ VY R ++A + + M S +++++NS++ A++ EA+++ +M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG-F 479
K D F++ +++S +E +F + G + + + + Y G F
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 480 VEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTA 535
E+ K+FD + + D V+WNT+L + NG SE +F+EM+ +G P TF
Sbjct: 436 TEM-MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 536 VLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
++SA G E+ ++ M + + P++ Y+ ++ AR G ++ ++ EM
Sbjct: 495 LISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 118/527 (22%), Positives = 204/527 (38%), Gaps = 129/527 (24%)
Query: 44 RRGCL-DDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLRLFHAMP----EKTH 94
+RG L +A Q+F+EM + ++N L++ + S E++++ + M +
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKALSLFKT 150
++N L+SA+A+ G L A L + M K + + T++ G+ + G A+S+F+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE---LEFDKVLCSSLV 207
M + C + G N GK I + I L D V ++L+
Sbjct: 410 MRNAGCKPNICTFNAFIKMYG--------NRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 208 KFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNS 267
+G+ G +DS V+GV KE+ AG + E R F N+
Sbjct: 462 AVFGQNG-MDS--EVSGVFKEM------------KRAGFVPE-RETF-----------NT 494
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA--------------------G 307
+IS Y G +A+ +++RM GV+ D+ST +L+A
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 308 CSLLVVELVKQMHAHAC--KIGVTHDI-------------VVASALLDAYSKSQGPHEAC 352
C + +HA+A +IG+ H + V+ L+ SK EA
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 353 KFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK---------------- 392
+ F ELK + D LN+M+++Y + A + D M +
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 393 -----------------------TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
+IS+N+++ +N +A IF M + D
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCK 476
++ + I + A+ S E V I G + S+VD YCK
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/459 (19%), Positives = 197/459 (42%), Gaps = 38/459 (8%)
Query: 9 GRTLREGRQLHVSFLKTGILN---SSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----T 61
G++ R + V L +LN S+ T N L+ Y+R G LD+A +L ++M +
Sbjct: 325 GKSHRPKEAMKV--LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLF 117
+ F++ TL+ +G ++ +F M + ++N + + G +F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 118 DSMPC----KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
D + + + WNT++ + + G + +FK M + T++ A
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV---PERETFNTLISAY 499
Query: 174 ADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE----V 229
+ C + V+ R++ G+ + ++++ + G + + +V +++
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTY--NTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 230 DDFSLSALVSGYANA---GKMRE-ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
++ + +L+ YAN G M A V+ ++ AVL +++ EA F
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
++ G S D++T+ +++S +V + + + G T + ++L+ +S+S
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 346 QGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSS----KTLISW 397
++ + E+ A D I NT+I Y R+ DA IF M + +I++
Sbjct: 678 ADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
N+ + A ++ EAI + M + ++ ++ S++
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 141/631 (22%), Positives = 267/631 (42%), Gaps = 96/631 (15%)
Query: 43 SRRGCLDDATQLFDEM------PQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEK---- 92
S+ G ++ A LFD M PQ A++ +LIE + + + L M ++
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYA--SLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 93 THYSWNMLVSAFAKSGDLQLAHSLFDSM---PCK-NGLVWNTIIHGYSKRGHPRKALSLF 148
+ Y++ +V SGDL A+++ M C+ N +++ T+I + + A+ +
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 149 KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
K M G D F N SL+
Sbjct: 476 KEMKEQ----------------GIAPDIFCYN------------------------SLII 495
Query: 209 FYGKCGDLDSAARVAGVVKEVDD------FSLSALVSGYANAGKMREARRVFDSRVDQCA 262
K +D A +V+ V++ F+ A +SGY A + A + + + +C
Sbjct: 496 GLSKAKRMDEARSF--LVEMVENGLKPNAFTYGAFISGYIEASEFASADK-YVKEMRECG 552
Query: 263 VLWNSI-----ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVK 317
VL N + I+ Y G+ +EA + ++ M G+ GD T +++ V+ +
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 318 QMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK----AYDTILLNTMITVY 373
++ G+ D+ L++ +SK +A F E+ + I+ N ++ +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 374 SNCGRIEDAKWIFDTMSSKTL----ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
G IE AK + D MS K L +++ +I+ G K+ +EA +F M + L D
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV--- 486
F + +++ C + +E +FG G +L+++ K G E+ +V
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 487 -----FDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACD 541
FD K ++V++N ++ G A LF +M+ + + P+ IT+T++L+ D
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 542 HTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADA--- 598
G E +FD I P+ YS +++ + + G +A+ L+++M F +A
Sbjct: 852 KMGRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQM-FAKNAVDD 909
Query: 599 --NMWFSVLRGCIAHGNRTIGKM-AAEKIIQ 626
+ S R ++ G +G+M AEK+++
Sbjct: 910 GCKLSISTCRALLS-GFAKVGEMEVAEKVME 939
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/438 (19%), Positives = 179/438 (40%), Gaps = 56/438 (12%)
Query: 10 RTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NAFS 65
+ +RE L L TG++N Y ++G + +A + M +A +
Sbjct: 546 KEMRECGVLPNKVLCTGLINE-----------YCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 66 WNTLIEAHLHSGHRNESLRLFHAMPEK----THYSWNMLVSAFAKSGDLQLAHSLFDSMP 121
+ L+ + +++ +F M K +S+ +L++ F+K G++Q A S+FD M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 122 ----CKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL-GACADC 176
N +++N ++ G+ + G KA L MS+ L H +A T++ G C
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL---HPNAVTYCTIIDGYC--- 708
Query: 177 FALNCGKQVHARVIVEGIELE---FDKVLCSSLVKFYGKCGDLDSAARVAGVVKE---VD 230
G A + + ++L+ D + ++LV + D++ A + G K+
Sbjct: 709 ---KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS 765
Query: 231 DFSLSALVSGYANAGKMREA----RRVFDSRVDQCA----VLWNSIISGYVLNGEEMEAL 282
+AL++ GK R+ D D+ V +N +I G A
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 283 ALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAY 342
LF +M+ + V T ++L+ + + + A G+ D ++ S +++A+
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 343 SKSQGPHEACKFFGELKAYDTI---------LLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
K +A ++ A + + +++ ++ G +E A+ + + M
Sbjct: 886 LKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Query: 394 LISWNSILVGLAKNACPS 411
I ++ ++ L +C S
Sbjct: 946 YIPDSATVIELINESCIS 963
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 194/410 (47%), Gaps = 28/410 (6%)
Query: 235 SALVSGYANAGKMREARRVFDSRV----DQCAVLWNSIISGYVLNGEEMEALALFKRMRR 290
SA++S GK+ A+R+F++ ++++IS Y +G EA+++F M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 291 HGVSGDVSTVANILSA-GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
+G+ ++ T ++ A G + + V + + GV D + ++LL S+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 350 EACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSIL 401
A F E+ D NT++ G+++ A I M K ++S+++++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 402 VGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLE 461
G AK EA+++F M L + +D+ S+ +++S E + + +VG++
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 462 FDHIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTL 517
D + +L+ Y K G + +KVF M + + ++++T++ GY+ G EA+ +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYA 577
FRE + +G+R + ++A++ A GLV +L D M I+P + Y+ ++D +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFG 595
Query: 578 RAGCLGEAIDLIE--EMPFQADANMWFSVLRGCIAHGNRTI---GKMAAE 622
R+ + + D +PF + A S L GNR I G++ E
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSA---LSAL--TETEGNRVIQLFGQLTTE 640
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 20/322 (6%)
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
KR RR G +++ ++S V + K++ A G + + SAL+ AY +S
Sbjct: 224 KRERRKNEQGKLASA--MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRS 281
Query: 346 QGPHEACKFFGELKAYDTILLNTMIT---VYSNCGR----IEDAKWIFDTMSSKTL---- 394
EA F +K Y L ++T V CG+ + FD M +
Sbjct: 282 GLHEEAISVFNSMKEYG--LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR 339
Query: 395 ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGK 454
I++NS+L ++ A ++F M ++ D FS+ +++ A ++L ++ +
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGY 510
+ + + ++++D + K G + +F M I D VS+NT+L Y G
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 511 GSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYS 570
EAL + REM G++ +T+ A+L G +E + +F MK + + P + YS
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYS 518
Query: 571 CMVDLYARAGCLGEAIDLIEEM 592
++D Y++ G EA+++ E
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREF 540
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 207/496 (41%), Gaps = 91/496 (18%)
Query: 93 THYSWNMLVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTIIHGYSKRGHPRKALSLF 148
T Y+++ L+SA+ +SG + A S+F+SM N + +N +I K G K ++ F
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 149 KTMSLDPLEM--VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
D ++ V D ++L C+ + + + IE D ++L
Sbjct: 327 ----FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ--DVFSYNTL 380
Query: 207 VKFYGKCGDLDSAARVAG--VVKEV--DDFSLSALVSGYANAGKMREARRVF-DSRVDQC 261
+ K G +D A + VK + + S S ++ G+A AG+ EA +F + R
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 262 A---VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQ 318
A V +N+++S Y G EAL + + M G+ DV T +L + VK+
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 319 MHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA----YDTILLNTMITVYS 374
+ + V +++ S L+D YSK EA + F E K+ D +L + +I
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 375 NCGRIEDAKWIFDTMS----SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
G + A + D M+ S ++++NSI ID F R +D D
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSI-------------IDAFGRSATMDRSADYS 607
Query: 431 SFASVISACASKSCLELGE-----QVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRK 485
+ S+ + ++ S L E Q+FG+ T S + C+ G E+
Sbjct: 608 NGGSLPFSSSALSALTETEGNRVIQLFGQLTTE--------SNNRTTKDCEEGMQEL--- 656
Query: 486 VFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC----- 540
S L +FR+M ++P+ +TF+A+L+AC
Sbjct: 657 --------------------------SCILEVFRKMHQLEIKPNVVTFSAILNACSRCNS 690
Query: 541 --DHTGLVEEGRNLFD 554
D + L+EE R LFD
Sbjct: 691 FEDASMLLEELR-LFD 705
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 184/455 (40%), Gaps = 97/455 (21%)
Query: 28 LNSSLTTANRLLQFYSRRGC-LDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNES 82
L +L T N ++ + G + FDEM Q + ++N+L+ G +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 83 LRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHG 134
LF M E+ +S+N L+ A K G + LA + MP K N + ++T+I G
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI 194
++K G +AL+LF M +
Sbjct: 419 FAKAGRFDEALNLFGEMRY----------------------------------------L 438
Query: 195 ELEFDKVLCSSLVKFYGKCGD----LDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
+ D+V ++L+ Y K G LD +A V + D + +AL+ GY GK E
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 251 RRVFD----SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
++VF V + ++++I GY G EA+ +F+ + G+ DV + ++ A
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKF------------ 354
C +V + K G++ ++V ++++DA+ +S + +
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSA 618
Query: 355 ---FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPS 411
E + I L +T SN +D + G+ + +C
Sbjct: 619 LSALTETEGNRVIQLFGQLTTESNNRTTKDCE------------------EGMQELSC-- 658
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
+++F +M+ L++K + +F+++++AC+ + E
Sbjct: 659 -ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFE 692
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 134/572 (23%), Positives = 233/572 (40%), Gaps = 87/572 (15%)
Query: 46 GCLDDATQLFDEMPQTNAF----SWNTLIEAHLHSGHRNESLRLFHAM----PEKTHYSW 97
G L++A Q F +M + F S N L+ G ++ R F M T +++
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 98 NMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHGYSKRGHPRKALSLFKTM- 151
N+++ K GD++ A LF+ M + GLV +N++I G+ K G + F+ M
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFR-GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 152 ---------SLDPLEMVHCDAGVLATVL------------------GACADCFALNCGKQ 184
+ + L C G L L D F Q
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 185 VHARVIVE--GIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV----DDFSLSALV 238
+ V+ + L ++ +SL+ K G+L A R+ + +V + + +AL+
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 239 SGYANAGKMREARRVFDSRVDQCAVL-----WNSIISGYVLNGEEMEALALFKRMRRHGV 293
G +A +M+EA +F ++D V+ +N++I G+V AL L ++ G+
Sbjct: 445 DGLCDAERMKEAEELF-GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 294 SGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACK 353
D+ + CSL +E K + + G+ + ++ + L+DAY KS P E
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 354 FFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEA 413
E+K L+ +TV + C I+ GL KN S+A
Sbjct: 564 LLDEMKE-----LDIEVTVVTFCVLID----------------------GLCKNKLVSKA 596
Query: 414 IDIFCRM-NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
+D F R+ N L+ + F ++I + +E +F + + GL D TSL+D
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 473 FYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRP 528
K G V + D M +K D +++ +++ G + +A + EM G+ P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 529 SAITFTAVLSACDHTGLVEEGRNLFD-TMKHN 559
+ +VL G ++E L MKH
Sbjct: 717 DEVLCISVLKKHYELGCIDEAVELQSYLMKHQ 748
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/440 (19%), Positives = 188/440 (42%), Gaps = 35/440 (7%)
Query: 203 CSSLVKFYGKCGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREARRVFDS 256
C+ L+ + K G D R AG V F+ + ++ G + AR +F+
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTV--FTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 257 R----VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL-- 310
+ V +NS+I G+ G + + F+ M+ DV T +++ C
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 311 --LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNT 368
+ +E ++M + G+ ++V S L+DA+ K +A KF+ +++ +
Sbjct: 348 LPIGLEFYREMKGN----GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 369 MIT--VYSNC--GRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRM 420
T + +NC G + DA + + M ++++ +++ GL EA ++F +M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
+ + + S+ ++I ++ ++ + G++ D ++ + + C +
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 481 EIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
E + V + M IK + + + T++ Y +G +E L L EM+ + + +TF +
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 537 LSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
+ LV + + F+ + +++ + ++ M+D + + A L E+M +
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 597 ---DANMWFSVLRGCIAHGN 613
D + S++ G GN
Sbjct: 644 LVPDRTAYTSLMDGNFKQGN 663
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 152/376 (40%), Gaps = 48/376 (12%)
Query: 264 LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHA 323
+++++ S + G EA+ F +M+R V + +L L + VK+
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 324 CKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRI 379
G + + ++D K A F E+K DT+ N+MI + GR+
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 380 EDAKWIFDTMS----SKTLISWNSIL---------------------VGLAKNACP-SEA 413
+D F+ M +I++N+++ GL N S
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 414 IDIFCRMNMLD-------------LKMDKFSFASVISACASKSCLELGEQVFGKAITVGL 460
+D FC+ M+ L +++++ S+I A L ++ + + VG+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 461 EFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALT 516
E++ + T+L+D C ++ ++F M + + S+N ++ G+ AL
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 517 LFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLY 576
L E++ G++P + + + +E + + + MK I Y+ ++D Y
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE-CGIKANSLIYTTLMDAY 552
Query: 577 ARAGCLGEAIDLIEEM 592
++G E + L++EM
Sbjct: 553 FKSGNPTEGLHLLDEM 568
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%)
Query: 428 DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF 487
D+ F + +CA+ LE ++V + D ++ ++ + +C + ++VF
Sbjct: 235 DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVF 294
Query: 488 DGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVE 547
D M+ D SW+ ++ Y+ NG G +AL LF EM G++P+ TF V AC G +E
Sbjct: 295 DHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
Query: 548 EGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
E FD+MK+ + I+P+ EHY ++ + + G L EA I ++PF+ A+ W ++
Sbjct: 355 EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNY 414
Query: 608 CIAHGNRTIGKMAAEKIIQLDP 629
HG+ + E ++ +DP
Sbjct: 415 ARLHGDIDLEDYMEELMVDVDP 436
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
D L N +I+++ C I DAK +FD M K + SW+ ++ + N +A+ +F M
Sbjct: 270 DPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMT 329
Query: 422 MLDLKMDKFSFASVISACASKSCLE 446
LK ++ +F +V ACA+ +E
Sbjct: 330 KHGLKPNEETFLTVFLACATVGGIE 354
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 3/217 (1%)
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
IDI MN + +D + C L+ + V GK D + L++
Sbjct: 241 TIDILASMNYV---VDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLE 297
Query: 473 FYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
Y CG VF+ M + + +W I+ +A NG+G +A+ +F + G P
Sbjct: 298 MYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQL 357
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
F + AC G V+EG F++M +Y I P IE Y +V++YA G L EA++ +E M
Sbjct: 358 FRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERM 417
Query: 593 PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDP 629
P + + ++W +++ HGN +G AE + LDP
Sbjct: 418 PMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 344 KSQGPHEACKFFGELKA----YDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
+++G EA G++ A D + ++ +YSNCG +A +F+ MS K L +W
Sbjct: 266 EAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCI 325
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACA-----SKSCLELGEQVFGK 454
I+ AKN +AID+F R D F + AC + L
Sbjct: 326 IIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDY 385
Query: 455 AITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVS-WNTIL 502
I +E D++ SLV+ Y GF++ + + M V W T++
Sbjct: 386 GIAPSIE-DYV---SLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 133/579 (22%), Positives = 249/579 (43%), Gaps = 77/579 (13%)
Query: 48 LDDATQLFDEM----PQTNAFSWNTLIEA---------HLHSGHRNESLRLFHAMPEKTH 94
LDDA LF M P + +N L+ A + G + + L + H +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----- 120
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG-----LVWNTIIHGYSKRGHPRKALSLFK 149
Y++N+L++ F + + LA +L M K G + +++++GY A++L
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA---RVIVEGIELEFDKVLCSSL 206
M +EM + + T L F N + A R++ G C
Sbjct: 180 QM----VEMGYRPDTITFTTL--IHGLFLHNKASEAVALVDRMVQRG---------CQPN 224
Query: 207 VKFYGKCGDLDSAARVAGVVKEVD-DFSLSALVSGYANAGKMREARRVFDSRVDQCAVLW 265
+ YG V G+ K D D +L+ L KM A+ ++ V++
Sbjct: 225 LVTYG--------VVVNGLCKRGDTDLALNLL-------NKMEAAK------IEADVVIF 263
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
N+II +AL LFK M G+ +V T ++++S CS Q+ + +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIED 381
+ ++V +AL+DA+ K EA K + ++ D N+++ + R++
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 382 AKWIFDTMSSKT----LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVIS 437
AK +F+ M SK ++++N+++ G K+ + ++F M+ L D ++ ++I
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 438 ACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKT 493
+ ++VF + ++ G+ D + + L+D C G +E +VFD M IK
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 494 DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF 553
D + T++ G G + LF + GV+P+ +T+ ++S L++E L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 554 DTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
MK + + P Y+ ++ + R G + +LI EM
Sbjct: 564 KKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 145/360 (40%), Gaps = 43/360 (11%)
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+A+ LF M + + +LSA + ++V + ++ + H + + L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 340 DAYSKSQGPHEACKFFGELK--AYDT--ILLNTMITVYSNCGRIEDAKWIFDTMSS---- 391
+ + + A G++ Y+ + L++++ Y + RI DA + D M
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
I++ +++ GL + SEA+ + RM + + ++ V++ + +L +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYG 511
K +E D +I +++D CK V+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVD------------------------------ 277
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
+AL LF+EM G+RP+ +T+++++S G + L M INP + ++
Sbjct: 278 -DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNA 335
Query: 572 MVDLYARAGCLGEAIDLIEEM---PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLD 628
++D + + G EA L ++M D + S++ G H K E ++ D
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESL 83
+N +L T N L+ + + G +A +L+D+M + + F++N+L+ +++
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 84 RLFHAMPEKTHY----SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHG 134
++F M K + ++N L+ F KS ++ LF M + GLV + T+I G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQG 444
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL-GACADCFALNCGKQVHARVIVEG 193
G A +FK M D V D + +L G C N GK A + +
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDG---VPPDIMTYSILLDGLC------NNGKLEKALEVFDY 495
Query: 194 I---ELEFDKVLCSSLVKFYGKCGDLDS------AARVAGVVKEVDDFSLSALVSGYANA 244
+ E++ D + +++++ K G +D + + GV V + + ++SG +
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV--VTYNTMISGLCSK 553
Query: 245 GKMREARRVFDSRVDQCAV----LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVST- 299
++EA + + + +N++I ++ +G++ + L + MR GD ST
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Query: 300 --VANILSAG 307
VAN+L G
Sbjct: 614 GLVANMLHDG 623
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 138/632 (21%), Positives = 263/632 (41%), Gaps = 88/632 (13%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLRLFH---- 87
NR L +R L +A +L+ M + + L+ A L E+L +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 88 --AMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHGYSKRGH 140
A P+ YS + V A K+ DL +A+SL M K V + ++I K+G+
Sbjct: 262 RGAEPDSLLYS--LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGN 319
Query: 141 PRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE--- 197
A+ L M D + M A L T G C + V A V+ + +E E
Sbjct: 320 MDDAIRLKDEMLSDGISMNVVAATSLIT--GHCKN------NDLVSALVLFDKMEKEGPS 371
Query: 198 FDKVLCSSLVKFYGKCGDLDSA------ARVAGVVKEVDDFSLSALVSGYANAGKMREAR 251
+ V S L++++ K G+++ A V G+ V F + ++ G+ K EA
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV--FHVHTIIQGWLKGQKHEEAL 429
Query: 252 RVFDSRVDQ---CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
++FD + + N+I+S G+ EA L +M G+ +V + N++ C
Sbjct: 430 KLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA-------- 360
++L + + ++ + G+ + S L+D ++ A + + +
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 361 -YDTIL-------------------------------LNTMITVYSNCGRIEDAKWIFDT 388
Y TI+ N++I + G ++ A ++
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 389 MS----SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
M S +I++ S++ GL KN +A+++ M +K+D ++ ++I +S
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG----FVEIGRKVFDGMIKTDEVSWNT 500
+E +F + + GL I SL+ + G +++ +K+ ++ D ++ T
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 501 ILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNY 560
++ G +G A L+ EM+ G+ P I +T +++ G + +F+ MK N
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN- 788
Query: 561 NINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
N+ P + Y+ ++ + R G L EA L +EM
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 225/554 (40%), Gaps = 89/554 (16%)
Query: 44 RRGCLDDATQLFDEMPQTNAFSWNTLIEAHLHSGH-RNE----SLRLFHAM----PEKTH 94
++G +DDA +L DEM ++ S N + L +GH +N +L LF M P
Sbjct: 316 KQGNMDDAIRLKDEM-LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNS 374
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN-----TIIHGYSKRGHPRKALSLFK 149
++++L+ F K+G+++ A + M GL + TII G+ K +AL LF
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVL-GLTPSVFHVHTIIQGWLKGQKHEEALKLFD 433
Query: 150 -----------------------------TMSLDPLEMVHCDAGVLA---TVLGACADCF 177
T L +E V++ +LG C
Sbjct: 434 ESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQK- 492
Query: 178 ALNCGKQVHARVIVEGIELE--FDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLS 235
++ + V + ++ +G++ +L + + + L+ + EV+
Sbjct: 493 NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552
Query: 236 ALVSGYANAGKMREARRVFDSRVDQ-----CAVLWNSIISGYVLNGEEMEALALFKRMRR 290
+++G G+ +AR + + +++ + +NSII G+ GE A+A ++ M
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG 612
Query: 291 HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
+G+S +V T ++++ C ++ +M GV DI AL+D + K
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 351 ACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACP 410
A F EL LN +Y NS++ G
Sbjct: 673 ASALFSELLEEG---LNPSQPIY------------------------NSLISGFRNLGNM 705
Query: 411 SEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
A+D++ +M L+ D ++ ++I L L +++ + VGL D II T +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 471 VDFYCKCG-FVEIGRKVFDGMIKTDEVS----WNTILMGYATNGYGSEALTLFREMRCSG 525
V+ K G FV++ K+F+ M K + +N ++ G+ G EA L EM G
Sbjct: 766 VNGLSKKGQFVKV-VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 526 VRPSAITFTAVLSA 539
+ P TF ++S
Sbjct: 825 ILPDGATFDILVSG 838
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 24/347 (6%)
Query: 233 SLSALVSGYANAGKMREARRVFDSR----VDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
+L +L++G+ + +EA + DS V++N++I+G N + AL +F M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 289 RRHGVSGDVSTVANILS----AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSK 344
+ G+ D T ++S +G L++ M K + +++ +AL+D + K
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM----VKRKIDPNVIFFTALIDTFVK 266
Query: 345 SQGPHEACKFFGELKAYDTI----LLNTMITVYSNCGRIEDAKWIFDTMSSK----TLIS 396
EA + E+ + N++I + G + DAK++FD M SK +++
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
+N+++ G K+ + + +FC M L D F++ ++I L + ++VF + +
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYGS 512
G+ D + L+D C G +E + + + K+ D +++N I+ G
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHN 559
EA LFR + GV+P AI + ++S GL E L MK +
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 158/345 (45%), Gaps = 36/345 (10%)
Query: 100 LVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
L++ F + Q A SL DSM N +++NT+I+G K AL +F M
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME--- 211
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVH-ARVIVEGIELEFDK--VLCSSLVKFYGK 212
+ + DA T++ + N G+ AR++ + ++ + D + ++L+ + K
Sbjct: 212 KKGIRADAVTYNTLISGLS-----NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 213 CGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ-C---A 262
G+L A + VV V F+ ++L++G+ G + +A+ +FD V + C
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNV--FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
V +N++I+G+ + + + LF M G+ GD T ++ C + + +++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA----YDTILLNTMITVYSNCGR 378
GV+ DIV + LLD + +A +L+ D I N +I +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 379 IEDAKWIFDTMSSKTL----ISWNSILVGLAKNACPSEAIDIFCR 419
+++A +F +++ K + I++ +++ GL + EA D CR
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA-DKLCR 488
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/324 (18%), Positives = 143/324 (44%), Gaps = 13/324 (4%)
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
+ L+ +M G+S D+ + ++ C + L + K+G IV +LL+
Sbjct: 98 VIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLN 157
Query: 341 AYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL-- 394
+ + EA + + + ++ NT+I + +A +F M K +
Sbjct: 158 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 217
Query: 395 --ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+++N+++ GL+ + ++A + M + + F ++I + L ++
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATN 508
+ I + + SL++ +C G + + +FD M+ D V++NT++ G+ +
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
+ + LF EM G+ A T+ ++ G + + +F+ M + ++P+I
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVT 396
Query: 569 YSCMVDLYARAGCLGEAIDLIEEM 592
Y+ ++D G + +A+ ++E++
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDL 420
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/325 (18%), Positives = 144/325 (44%), Gaps = 13/325 (4%)
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+A +LF M + + +L+ + ++V ++ +G++HD+ + L+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 340 DAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSS---- 391
+ + A G++ + L +++ + R ++A + D+M
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
++ +N+++ GL KN + A+++F M ++ D ++ ++IS ++ ++
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV----SWNTILMGYAT 507
+ ++ + I T+L+D + K G + R ++ MI+ V ++N+++ G+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE 567
+G +A +F M G P +T+ +++ + VE+G LF M + +
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 568 HYSCMVDLYARAGCLGEAIDLIEEM 592
Y+ ++ Y +AG L A + M
Sbjct: 362 -YNTLIHGYCQAGKLNVAQKVFNRM 385
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 117/299 (39%), Gaps = 52/299 (17%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKT 93
L+ + + G L +A L+ EM + N F++N+LI G ++ +F M K
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 94 HY----SWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKAL 145
+ ++N L++ F KS ++ LF M + + +NT+IHGY + G A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 146 SLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSS 205
+F MV C DC N GK A V+VE
Sbjct: 380 KVFN-------RMVDCGVSPDIVTYNILLDCLC-NNGKIEKALVMVE------------- 418
Query: 206 LVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSR----VDQC 261
DL + +VD + + ++ G K++EA +F S V
Sbjct: 419 ---------DLQKSE------MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMH 320
A+ + ++ISG G + EA L +RM+ G L + L EL+K H
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAAH 522
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 375 NCGRIEDAKWIF-DTMSSK---TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
+C + +DA +F + + S+ +++ + +L +AK I ++ +M L + D +
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 431 SFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM 490
SF +I S L L + GK + +G + SL++ +C+ + + D M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 491 ----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL- 545
+ V +NT++ G N + AL +F M G+R A+T+ ++S ++G
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA---DANMWF 602
+ R L D +K I+P + ++ ++D + + G L EA +L +EM ++ + +
Sbjct: 236 TDAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 603 SVLRGCIAHG 612
S++ G HG
Sbjct: 294 SLINGFCIHG 303
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 141/626 (22%), Positives = 252/626 (40%), Gaps = 118/626 (18%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLFHAMPE-- 91
L+ Y R G + DA ++ D M + TN N+LI + SG E+ ++F M +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 92 --KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHGYSKRGHPRKA 144
H+++N LV + ++G + A L D M C+ +V +N ++ GYS+ G
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQM-CQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 145 LSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCS 204
LSL+K M GV A D++ CS
Sbjct: 456 LSLWKMM---------LKRGVNA-------------------------------DEISCS 475
Query: 205 SLVKFYGKCGDLDSAARV-AGVVKE---VDDFSLSALVSGYANAGKMREARRVFDS---- 256
+L++ K GD + A ++ V+ D +L+ ++SG K+ EA+ + D+
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIF 535
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL----V 312
R + ++ GY G EA A+ + M R G+ + ++S V
Sbjct: 536 RCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKV 595
Query: 313 VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTI--LLNTMI 370
+LV ++ A G+T + AL+ + C KAY T ++ I
Sbjct: 596 ADLVIELRAR----GLTPTVATYGALITGW---------CNIGMIDKAYATCFEMIEKGI 642
Query: 371 TVYSN-CGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
T+ N C +I ++ + D + L+ + L S + +
Sbjct: 643 TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQS---------------LKE 687
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
F AS + ++ E E K + V ++I+ + CK G +E RK+F
Sbjct: 688 FLEASATTCLKTQKIAESVENSTPKKLLVP---NNIVYNVAIAGLCKAGKLEDARKLFSD 744
Query: 490 MIKTD-----EVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
++ +D E ++ ++ G A G ++A TL EM G+ P+ +T+ A++ G
Sbjct: 745 LLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Query: 545 LVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSV 604
V+ + L + I P Y+ ++D ++G + EA+ L E+M
Sbjct: 805 NVDRAQRLLHKLPQK-GITPNAITYNTLIDGLVKSGNVAEAMRLKEKM------------ 851
Query: 605 LRGCIAHGNRTIGKMAAEKIIQLDPE 630
+ + G+ G + K + LDPE
Sbjct: 852 IEKGLVRGSDKQGDVDIPKEVVLDPE 877
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 195/460 (42%), Gaps = 32/460 (6%)
Query: 102 SAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTM-SLDPLEMVH 160
S F G+L F P V++ I+ Y+++G + AL +F M + + +
Sbjct: 136 SGFVVWGELVRVFKEFSFSPT----VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLL 191
Query: 161 CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAA 220
+L+ ++ + AL+ Q+ + E+ D CS +V Y + G++D A
Sbjct: 192 SCNSLLSNLVRKGENFVALHVYDQMIS------FEVSPDVFTCSIVVNAYCRSGNVDKAM 245
Query: 221 RVAGVVK-----EVDDFSLSALVSGYANAGKMREARRVF----DSRVDQCAVLWNSIISG 271
A + E++ + ++L++GYA G + RV + V + V + S+I G
Sbjct: 246 VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKG 305
Query: 272 YVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHD 331
Y G EA +F+ ++ + D ++ C + ++H + +IGV +
Sbjct: 306 YCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTN 365
Query: 332 IVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFD 387
+ ++L++ Y KS EA + F + + D NT++ Y G +++A + D
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCD 425
Query: 388 TMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKS 443
M K T++++N +L G ++ + + ++ M + D+ S ++++ A
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485
Query: 444 CLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWN 499
+++ + GL D I ++ CK V +++ D + K ++
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 500 TILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
+ GY G EA + M G+ P+ + ++S
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 186/420 (44%), Gaps = 60/420 (14%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQCA----VLWNSIISGYVLNGEEMEALA 283
E D + S LV+G+ G++ EA + D V+ V +++I+G L G EAL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 284 LFKRMRRHGVSGDVSTVANILS----AGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
L RM +G D T +L+ +G S L ++L ++M K V V S ++
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV----VQYSIVI 252
Query: 340 DAYSKSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI 395
D+ K +A F E++ D + +++I N G+ +D + M + +I
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 396 ----SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
++++++ K EA +++ M + D ++ S+I ++CL Q+
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF-----DGMIKTDEVSWNTILMGYA 506
F ++ G E D + + L++ YCK V+ G ++F G+I + +++NT+++G+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGFC 431
Query: 507 TNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHN------- 559
+G + A LF+EM GV PS +T+ +L G + + +F+ M+ +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 560 -YNI--------------------------NPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
YNI P++ Y+ M+ + G L EA L +M
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 203/481 (42%), Gaps = 72/481 (14%)
Query: 91 EKTHYSWNMLVSAFAKSGDLQLAHSLFD---SMPCKNGLVW-NTIIHGYSKRGHPRKALS 146
E +++ LV+ F G + A +L D M + LV +T+I+G +G +AL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 147 LFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLC 203
L M P E+ + VL + + AL+ +++ R I + V
Sbjct: 197 LIDRMVEYGFQPDEVTY--GPVLNRLCKSGNSALALDLFRKMEERNIKASV------VQY 248
Query: 204 SSLVKFYGKCGDLDSAARVAGVVK----EVDDFSLSALVSGYANAGKMREA----RRVFD 255
S ++ K G D A + ++ + D + S+L+ G N GK + R +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 256 SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVEL 315
+ V ++++I +V G+ +EA L+ M G++ D T +++ C +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 316 VKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMIT 371
QM G DIV S L+++Y K++ + + F E+ + +TI NT++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 372 VYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM 427
+ G++ AK +F M S+ +++++ +L GL N ++A++IF +M
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ------ 482
Query: 428 DKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD----FYCKCGFVEIG 483
KS + LG ++ I + + S VD +C
Sbjct: 483 --------------KSRMTLGIGIYNIII------HGMCNASKVDDAWSLFCSLS----- 517
Query: 484 RKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHT 543
D +K D V++N ++ G G SEA LFR+M+ G P T+ ++ A H
Sbjct: 518 ----DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA--HL 571
Query: 544 G 544
G
Sbjct: 572 G 572
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 187/433 (43%), Gaps = 33/433 (7%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEM----PQTNAFSWNTLIEAHLHSGHRNESLRLFHAM 89
T + L+ + G + +A L D M + + + +TLI G +E+L L M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 90 PE----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKN----GLVWNTIIHGYSKRGHP 141
E ++ +++ KSG+ LA LF M +N + ++ +I K G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 142 RKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKV 201
ALSLF M + + + D ++++G + + G ++ +I G + D V
Sbjct: 262 DDALSLFNEMEM---KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIPDVV 316
Query: 202 LCSSLVKFYGKCGDLDSAARVAG--VVKEV--DDFSLSALVSGYANAGKMREARRVFDSR 257
S+L+ + K G L A + + + + D + ++L+ G+ + EA ++FD
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 258 VDQ-CA---VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVV 313
V + C V ++ +I+ Y + + LF+ + G+ + T ++ C +
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 314 ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL----LNTM 369
K++ GV +V LLD + ++A + F +++ L N +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 370 ITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDL 425
I N +++DA +F ++S K ++++N ++ GL K SEA +F +M
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 426 KMDKFSFASVISA 438
D F++ +I A
Sbjct: 557 TPDDFTYNILIRA 569
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 143/370 (38%), Gaps = 78/370 (21%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTL 69
E R + S ++ I+ SL + G DDA LF+EM + + ++++L
Sbjct: 237 EERNIKASVVQYSIVIDSLC----------KDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 70 IEAHLHSGHRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK 123
I + G ++ ++ M P+ +S L+ F K G L A L++ M +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA--LIDVFVKEGKLLEAKELYNEMITR 344
Query: 124 ----NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFAL 179
+ + +N++I G+ K +A +F M V C
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLM-----------------VSKGC------ 381
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV------AGVVKEVDDFS 233
E D V S L+ Y K +D R+ G++ + +
Sbjct: 382 -----------------EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP--NTIT 422
Query: 234 LSALVSGYANAGKMREARRVFDSRVDQ----CAVLWNSIISGYVLNGEEMEALALFKRMR 289
+ LV G+ +GK+ A+ +F V + V + ++ G NGE +AL +F++M+
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
+ ++ + I+ C+ V+ + GV D+V + ++ K
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 350 EACKFFGELK 359
EA F ++K
Sbjct: 543 EADMLFRKMK 552
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 128/575 (22%), Positives = 248/575 (43%), Gaps = 69/575 (12%)
Query: 48 LDDATQLFDEMPQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH--------YSWNM 99
LDDA LF +M ++ F L + + L ++ E+ Y++++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 100 LVSAFAKSGDLQLAHSLFDSMPCKNG-----LVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
L++ F + L LA ++ M K G + N++++G+ A+SL M
Sbjct: 122 LINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM--- 177
Query: 155 PLEM-VHCDAGVLATVLGACADCFALNCGKQVHA---RVIVEGIELEFDKVLCSSLVKFY 210
+EM D+ T++ F N + A R++V+G C + Y
Sbjct: 178 -VEMGYQPDSFTFNTLIHGL---FRHNRASEAVALVDRMVVKG---------CQPDLVTY 224
Query: 211 GKCGDLDSAARVAGVVKEVD-DFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSII 269
G V G+ K D D +LS L +++ +++ V++N+II
Sbjct: 225 GIV--------VNGLCKRGDIDLALSLL-------------KKMEQGKIEPGVVIYNTII 263
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
+AL LF M G+ +V T +++ C+ ++ + + +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWI 385
++V SAL+DA+ K EA K + E+ D +++I + R+++AK +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 386 FDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACAS 441
F+ M SK ++++N+++ G K E +++F M+ L + ++ ++I
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVS 497
+ + VF + ++ G+ D + + L+D C G VE VF+ + ++ D +
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK 557
+N ++ G G + LF + GV+P+ +T+T ++S GL EE LF MK
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 558 HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+ P+ Y+ ++ + R G + +LI EM
Sbjct: 564 EEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/553 (19%), Positives = 230/553 (41%), Gaps = 74/553 (13%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNESL 83
++ +L T + L+ + RR L A + +M + + + N+L+ H ++++
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 84 RLFHAMPEKTH----YSWNMLVSAFAKSGDLQLAHSLFDSM---PCKNGLV-WNTIIHGY 135
L M E + +++N L+ + A +L D M C+ LV + +++G
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGVLA--TVLGACADCFALNCGKQVHARVIVEG 193
KRG ALSL K M +E GV+ T++ A + +N + + +G
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIE-----PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 194 IELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRV 253
I VV + ++L+ N G+ +A R+
Sbjct: 287 IR---------------------------PNVV------TYNSLIRCLCNYGRWSDASRL 313
Query: 254 F----DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
+ +++ V ++++I +V G+ +EA L+ M + + D+ T +++++ C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTIL 365
++ K M ++V + L+ + K++ E + F E+ +T+
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 366 LNTMITVYSNCGRIEDAKWIFDTMSS----KTLISWNSILVGLAKNACPSEAIDIFCRMN 421
T+I + ++A+ +F M S +++++ +L GL N A+ +F +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
++ D +++ +I +E G +F G++ + + T+++ +C+ G E
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 482 IGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
+F M + D ++NT++ + +G + + L REMR A T V
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV- 612
Query: 538 SACDHTGLVEEGR 550
T ++ +GR
Sbjct: 613 -----TNMLHDGR 620
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 130/612 (21%), Positives = 251/612 (41%), Gaps = 71/612 (11%)
Query: 39 LQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEK-- 92
++ Y R+G + +A +F+ M + FS+N ++ + SG+ +++ +++ M ++
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 93 --THYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKALS 146
YS+ + + +F K+ A L ++M + N + + T++ G+ + +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 147 LFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSL 206
LF M LA+ + C F + +VLC
Sbjct: 203 LFGKM--------------LASGVSLCLSTFN------------------KLLRVLCKKG 230
Query: 207 -VKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCA--- 262
VK +C L GV+ + F+ + + G G++ A R+ ++Q
Sbjct: 231 DVK---ECEKLLDKVIKRGVLPNL--FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 263 -VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
+ +N++I G N + EA +M G+ D T +++ C +V+L +++
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGE-----LKAYDTILLNTMITVYSNC 376
A G D +L+D + A F E +K + IL NT+I SN
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP-NVILYNTLIKGLSNQ 404
Query: 377 GRIEDAKWIFDTMSSKTLI----SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
G I +A + + MS K LI ++N ++ GL K C S+A + M D F+F
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK 492
+I +++ +E ++ + G++ D SL++ CK E + + M++
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 493 ----TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEE 548
+ ++N +L EAL L EM+ V P A+TF ++ G ++
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 549 GRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMP---FQADANMWFSVL 605
LF M+ Y ++ Y+ ++ + + A L +EM D + ++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 606 RGCIAHGNRTIG 617
G GN +G
Sbjct: 645 DGFCKTGNVNLG 656
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 127/574 (22%), Positives = 218/574 (37%), Gaps = 130/574 (22%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQ----LFDEMPQTNAFSWN 67
++E +L +K G+L +L T N +Q +RG LD A + L ++ P+ + ++N
Sbjct: 232 VKECEKLLDKVIKRGVL-PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 68 TLI----------EAHLHSGHR-NESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSL 116
LI EA ++ G NE L E Y++N L++ + K G +QLA +
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGL-------EPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 117 FDSMPCKNGLV-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLG 171
NG V + ++I G G +AL+LF
Sbjct: 344 VGD-AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE--------------------- 381
Query: 172 ACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVA------GV 225
AL GK + VI L ++L+K G + AA++A G+
Sbjct: 382 ------AL--GKGIKPNVI-----------LYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 226 VKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSIISGYVLNGEEMEA 281
+ EV F++ LV+G G + +A + + + +N +I GY + A
Sbjct: 423 IPEVQTFNI--LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 282 LALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDA 341
L + M +GV DV T ++L+ C E V + + + G ++ + LL++
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES 540
Query: 342 YSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISW 397
+ + EA E+K D + T+I + G ++ A +F M +S
Sbjct: 541 LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
++ P+ I +I A K + + E++F + +
Sbjct: 601 ST----------PTYNI--------------------IIHAFTEKLNVTMAEKLFQEMVD 630
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
L D +VD +CK G V +G K M++ NG+ TL
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME---------------NGFIPSLTTL 675
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN 551
R + C V ++ GLV E N
Sbjct: 676 GRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/549 (20%), Positives = 229/549 (41%), Gaps = 39/549 (7%)
Query: 38 LLQFYSRRGCLDDATQLFDEMP-----QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEK 92
+++ Y + G T+L EM + S+N ++E + + +F+ M +
Sbjct: 152 IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR 211
Query: 93 ----THYSWNMLVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTIIHGYSKRGHPRKA 144
T +++ +++ AF ++ A SL M N +++ T+IH SK +A
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 145 LSLFKTMSLDPLEMVHC--DAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVL 202
L L + M L + C DA V+ +N ++ R+++ G D +
Sbjct: 272 LQLLEEMFL-----MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP--DDIT 324
Query: 203 CSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCA 262
L+ K G +D+A + + + + + L+ G+ G++ +A+ V V
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 263 VL-----WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVK 317
++ +NS+I GY G AL + MR G +V + ++ C L ++
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 318 QMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK----AYDTILLNTMITVY 373
+ G+ + V + L+ A+ K EA + F E+ D N++I+
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 374 SNCGRIEDAKWIFDTMSSKTLI----SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
I+ A W+ M S+ ++ ++N+++ + EA + M +D+
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
++ S+I ++ +F K + G +I L++ C+ G VE +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 490 MI----KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
M+ D V++N+++ G G + LT+FR+++ G+ P +TF ++S G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 546 VEEGRNLFD 554
V + L D
Sbjct: 685 VYDACLLLD 693
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 142/340 (41%), Gaps = 10/340 (2%)
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
+V++ ++I EAL L + M G D T +++ C + +M
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
G D + L++ K A F + + ++ NT+I + GR++D
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 382 AKWIFDTMSSKTLI-----SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
AK + M + I ++NS++ G K A+++ M K + +S+ ++
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCK----CGFVEIGRKVFDGMIK 492
++ V + GL+ + + L+ +CK VEI R++ K
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNL 552
D ++N+++ G AL L R+M GV + +T+ +++A G ++E R L
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 553 FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+ M + EI Y+ ++ RAG + +A L E+M
Sbjct: 552 VNEMVFQGSPLDEIT-YNSLIKGLCRAGEVDKARSLFEKM 590
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 112/241 (46%), Gaps = 14/241 (5%)
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLI----SWNSILVGLAKNACPSEAIDIF 417
++++ T+I S C R+ +A + + M + ++N +++GL K +EA +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 418 CRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC 477
RM + D ++ +++ ++ + +F + + +I +L+ +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTH 366
Query: 478 GFVEIGRKVFDGMIKT-----DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAIT 532
G ++ + V M+ + D ++N+++ GY G AL + +MR G +P+ +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 533 FTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+T ++ G ++E N+ + M + + P ++C++ + + + EA+++ EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 593 P 593
P
Sbjct: 486 P 486
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 177/377 (46%), Gaps = 17/377 (4%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDS----RVDQCAVLWNSIISGYVLNGEEMEALA 283
E D +LS+L++GY + ++ EA + D V +N++I G L+ + EA+A
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
L RM G D+ T +++ C ++L + K + D+V+ + ++DA
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 344 KSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL----I 395
+ ++A F E+ + + N++I N GR DA + M + + +
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
++++++ K EA ++ M + D F+++S+I+ L+ + +F
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYG 511
I+ + + +L+ +CK VE G ++F M + + V++NT++ G G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
A +F++M GV P IT++ +L G +E+ +F+ ++ + + P+I Y+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNI 505
Query: 572 MVDLYARAGCLGEAIDL 588
M++ +AG + + DL
Sbjct: 506 MIEGMCKAGKVEDGWDL 522
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 120/561 (21%), Positives = 230/561 (40%), Gaps = 111/561 (19%)
Query: 48 LDDATQLFDEMPQTNAFS----WNTLIEA---------HLHSGHRNESLRLFHAMPEKTH 94
LDDA LF EM Q+ +N L+ A + G R ++LR+ + +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDL----- 115
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG-----LVWNTIIHGYSKRGHPRKALSLFK 149
YS+N+L++ F + L LA ++ M K G + +++++GY +A++L
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHA---RVIVEGIELEFDKVLCSSL 206
M + + L L F N + A R++ G C
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGL------FLHNKASEAVALIDRMVARG---------CQPD 219
Query: 207 VKFYGKCGDLDSAARVAGVVKEVD-DFSLSALVSGYANAGKMREARRVFDSRVDQCAVLW 265
+ YG V G+ K D D +LS L +++ +++ V++
Sbjct: 220 LFTYGTV--------VNGLCKRGDIDLALSLL-------------KKMEKGKIEADVVIY 258
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
+II +AL LF M G+ +V T +++ C+ ++ + +
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIED 381
+ ++V SAL+DA+ K EA K + E+ D +++I + R+++
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 382 AKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVIS 437
AK +F+ M SK ++++N+++ G K E +++F M+ L + ++ ++I
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 438 ACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFD--------- 488
++ +++F K ++ G+ D I + L+D CK G +E VF+
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 489 ----------GM--------------------IKTDEVSWNTILMGYATNGYGSEALTLF 518
GM +K + + + T++ G+ G EA LF
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 519 REMRCSGVRPSAITFTAVLSA 539
REM+ G P++ T+ ++ A
Sbjct: 559 REMKEDGTLPNSGTYNTLIRA 579
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 37/304 (12%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESL 83
+N ++ T + L+ + + G L +A +L+DEM + + F++++LI +E+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 84 RLFHAMPEKTHY----SWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGY 135
+F M K + ++N L+ F K+ ++ LF M + N + +NT+I G
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL-GACADCFALNCGKQVHARVIVEGI 194
+ G A +FK M D V D + +L G C GK A V+ E +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDG---VPPDIITYSILLDGLC------KYGKLEKALVVFEYL 491
Query: 195 E---LEFDKVLCSSLVKFYGKCG------DLDSAARVAGVVKEVDDFSLSALVSGYANAG 245
+ +E D + +++ K G DL + + GV V ++ ++SG+ G
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT--TMISGFCRKG 549
Query: 246 KMREARRVFDSRVDQCAV----LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVA 301
EA +F + + +N++I + +G++ + L K MR G GD ST++
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Query: 302 NILS 305
+++
Sbjct: 610 MVIN 613
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 9/223 (4%)
Query: 378 RIEDAKWIFDTMSS----KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFA 433
+++DA +F M +++ +N +L +AK I + RM L + D +S+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 434 SVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI-- 491
+I+ +S L L V GK + +G E D + +SL++ YC + + D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 492 --KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEG 549
+ + V++NT++ G + SEA+ L M G +P T+ V++ G ++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 550 RNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+L M+ I ++ Y+ ++D + +A++L EM
Sbjct: 240 LSLLKKMEKG-KIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 209/494 (42%), Gaps = 45/494 (9%)
Query: 111 QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
+L + D P N + + T+I+G+ KRG +A LFK M +E D +T++
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE---PDLIAYSTLI 328
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVD 230
L G ++ ++ + +G++L D V+ SS + Y K GDL +A+ V
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKL--DVVVFSSTIDVYVKSGDLATASVV-------- 378
Query: 231 DFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRR 290
+R+ + V + +I G +G EA ++ ++ +
Sbjct: 379 -------------------YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 291 HGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHE 350
G+ + T ++++ C + ++ K+G D+V+ L+D SK
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 351 ACKF----FGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLISWNSILV 402
A +F G+ + ++ N++I + R ++A +F M + ++ +++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 403 GLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEF 462
EA+ +F RM + L+ D ++ ++I A +G Q+F +
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 463 DHIISTSLVDFYCKCGFVEIGRKVFDGMI----KTDEVSWNTILMGYATNGYGSEALTLF 518
D + ++ KC +E K F+ +I + D V++NT++ GY + EA +F
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 519 REMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYAR 578
++ + P+ +T T ++ ++ +F M + P Y C++D +++
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSK 718
Query: 579 AGCLGEAIDLIEEM 592
+ + + L EEM
Sbjct: 719 SVDIEGSFKLFEEM 732
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/534 (21%), Positives = 224/534 (41%), Gaps = 43/534 (8%)
Query: 30 SSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRL 85
++ T L+ + +RG +D A LF M Q + +++TLI+ + +G +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 86 F----HAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSK 137
F H + ++ + + KSGDL A ++ M C+ N + + +I G +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 138 RGHPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI 194
G +A ++ + ++P + + ++++ C L G ++ +I G
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTY------SSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 195 ELEFDKVLCSSLVKFYGKCGDLDSAARVA----GVVKEVDDFSLSALVSGYANAGKMREA 250
D V+ LV K G + A R + G ++ ++L+ G+ + EA
Sbjct: 458 PP--DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 251 RRVFDSR----VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA 306
+VF + + +++ ++ G EAL LF RM + G+ D ++ A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL----KAYD 362
C + + Q+ + ++ DI V + ++ K +A KFF L D
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSKTL----ISWNSILVGLAKNACPSEAIDIFC 418
+ NTMI Y + R+++A+ IF+ + ++ ++ L KN AI +F
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 419 RMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG 478
M K + ++ ++ + +E ++F + G+ + + ++D CK G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 479 FVEIGRKVF----DGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRP 528
V+ +F D + D V++ ++ GY G EA L+ M +GV+P
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 35/343 (10%)
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
V + ++I+G+ GE A LFK M + G+ D+ + ++ ++ + ++ +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
A GV D+VV S+ +D Y KS G+L A +++ M+ C I
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKS----------GDL-ATASVVYKRML-----CQGI-- 387
Query: 382 AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACAS 441
S ++++ ++ GL ++ EA ++ ++ ++ +++S+I
Sbjct: 388 ---------SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF----VEIGRKVFDGMIKTDEVS 497
L G ++ I +G D +I LVD K G + K+ I+ + V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMK 557
+N+++ G+ EAL +FR M G++P TFT V+ G +EE LF M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM- 557
Query: 558 HNYNINPEIEHYSCMVDLYAR--AGCLG-EAIDLIEEMPFQAD 597
+ P+ Y ++D + + +G + DL++ AD
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 196/454 (43%), Gaps = 67/454 (14%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQ-C---AVLWNSIISGYVLNGEEMEALA 283
E D + + L+ G GK+ EA + D V+ C V +NSI++G +G+ AL
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 284 LFKRMRRHGVSGDVSTVANILSA----GCSLLVVELVKQMHAHA---------------C 324
L ++M V DV T + I+ + GC + L K+M C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 325 KIG----------------VTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTI 364
K G + +++ + LLD + K EA + + E+ + I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTM----SSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
NT++ Y R+ +A + D M S ++++ S++ G + + +F +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV 480
+ L + +++ ++ ++L E++F + ++ G+ D + L+D C G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 481 EIGRKVFDGMIKTDE----VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAV 536
E ++F+ + K+ V + TI+ G G +A LF + C GV+P+ +T+T +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 537 LSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMP--- 593
+S G + E L M+ + N P Y+ ++ + R G L + LIEEM
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 594 FQADA-------NMWFS-----VLRGCIAHGNRT 615
F ADA +M S LR C++ G+++
Sbjct: 574 FSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKS 607
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 148/324 (45%), Gaps = 25/324 (7%)
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSL----LVVELVKQMHAHACKIGVTHDIVVA 335
+A+ALF+ M R + + SA LV++ KQ+ + G+ H+I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN----GIAHNIYTL 126
Query: 336 SALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTM-- 389
+ +++ + + A G++ DT NT+I G++ +A + D M
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 390 --SSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLEL 447
++++NSI+ G+ ++ S A+D+ +M ++K D F+++++I + C++
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 448 GEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEV----SWNTILM 503
+F + T G++ + SLV CK G G + M+ + V ++N +L
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 504 GYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNIN 563
+ G EA L++EM G+ P+ IT+ ++ + E N+ D M N +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCS 365
Query: 564 PEIEHYSCMVDLYARAGCLGEAID 587
P+I ++ ++ Y C+ + +D
Sbjct: 366 PDIVTFTSLIKGY----CMVKRVD 385
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 137/300 (45%), Gaps = 35/300 (11%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNESLRLFHAM 89
T + ++ R GC+D A LF EM +++ ++N+L+ +G N+ L M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 90 PEK----THYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHP 141
+ ++N+L+ F K G LQ A+ L+ M + N + +NT++ GY +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 142 RKALSLFKTMSLDPLEMVHCDAGVL---ATVLGACADCFALNCGKQVHARVIVEGIELEF 198
+A ++ LD + C ++ + + G C ++ G +V + G L
Sbjct: 350 SEANNM-----LDLMVRNKCSPDIVTFTSLIKGYCM-VKRVDDGMKVFRNISKRG--LVA 401
Query: 199 DKVLCSSLVKFYGKCGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREARR 252
+ V S LV+ + + G + A + GV+ +V + + L+ G + GK+ +A
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI--LLDGLCDNGKLEKALE 459
Query: 253 VFD----SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
+F+ S++D V++ +II G G+ +A LF + GV +V T ++S C
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 242/539 (44%), Gaps = 44/539 (8%)
Query: 85 LFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTIIHGYSKRGH 140
+ + P + + +N L+SA AK L SL + M N +N +I+ + +R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 141 PRKALSLF-KTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARV--IVEGIELE 197
AL+L K M L + + +L G C GK++ V + + +E+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLN---GYCH-------GKRISDAVALVDQMVEMG 110
Query: 198 F--DKVLCSSLVK---FYGKCGDLDSAARVAGVVK---EVDDFSLSALVSGYANAGKMRE 249
+ D + ++L+ + K + + A V +V+ + + + +V+G G +
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASE--AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 250 ARRVFD----SRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
A + + ++++ V++N+II +AL LFK M G+ +V T ++++S
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 306 AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY---- 361
CS Q+ + + + ++V +AL+DA+ K EA K ++
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 362 DTILLNTMITVYSNCGRIEDAKWIFDTMSSKT----LISWNSILVGLAKNACPSEAIDIF 417
D N++I + R++ AK +F+ M SK L ++N+++ G K+ + ++F
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 418 CRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKC 477
M+ L D ++ ++I + ++VF + ++ G+ D + + L+D C
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 478 GFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITF 533
G +E +VFD M IK D + T++ G G + LF + GV+P+ +T+
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 534 TAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
++S L++E L MK + + P+ Y+ ++ + R G + +LI EM
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 187/422 (44%), Gaps = 41/422 (9%)
Query: 31 SLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLF 86
S+ T + LL Y + DA L D+M + + ++ TLI +E++ L
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 87 HAMPEK----THYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKR 138
M ++ ++ ++V+ K GD+ LA +L + M + +++NTII K
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 139 GHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEF 198
H AL+LFK M + + + ++++ + Q+ + +I + I
Sbjct: 199 RHVDDALNLFKEME---TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 199 DKVLCSSLVKFYGKCGDLDSAARV-AGVVK---EVDDFSLSALVSGYANAGKMREARRVF 254
V ++L+ + K G A ++ ++K + D F+ ++L++G+ ++ +A+++F
Sbjct: 256 --VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 255 DSRVDQCAV----LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA---- 306
+ V + +N++I G+ + + LF+ M G+ GD T ++
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK----AYD 362
G ++ KQM + GV DI+ S LLD + +A + F ++ D
Sbjct: 374 GDCDNAQKVFKQMVSD----GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFC 418
+ TMI G+++D +F ++S K ++++N+++ GL EA +
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 419 RM 420
+M
Sbjct: 490 KM 491
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/527 (19%), Positives = 223/527 (42%), Gaps = 43/527 (8%)
Query: 31 SLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLRLF 86
S+ N+LL ++ D L ++M + N +++N LI + +L L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 87 HAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTIIHGYSKR 138
M E + + + L++ + + A +L D M + + + T+IHG
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 139 GHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADC-FALNCGKQVHARVIVEGIELE 197
+A++L M + GV+ L D A N ++ E ++E
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM------EAAKIE 182
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREAR 251
D V+ ++++ K +D A + G+ V + S+L+S + G+ +A
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV--VTYSSLISCLCSYGRWSDAS 240
Query: 252 RVF----DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
++ + +++ V +N++I +V G+ +EA L M + + D+ T ++++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK----AYDT 363
C ++ KQM D+ + L+ + KS+ + + F E+ DT
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSS----KTLISWNSILVGLAKNACPSEAIDIFCR 419
+ T+I + G ++A+ +F M S +++++ +L GL N +A+++F
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
M ++K+D + + ++I ++ G +F G++ + + +++ C
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 480 VEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTLFREMR 522
++ + M + D ++NT++ + +G + + L REMR
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 141/337 (41%), Gaps = 43/337 (12%)
Query: 303 ILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK--A 360
+LSA + +LV + ++G++H++ + L++ + + A G++
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 361 YDT--ILLNTMITVYSNCGRIEDAKWIFDTMSS----KTLISWNSILVGLAKNACPSEAI 414
Y+ + L++++ Y + RI DA + D M I++ +++ GL + SEA+
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 415 DIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
+ RM + + ++ V++ + ++L + K +E D +I +++D
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 475 CKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
CK V+ +AL LF+EM G+RP+ +T++
Sbjct: 196 CKYRHVD-------------------------------DALNLFKEMETKGIRPNVVTYS 224
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM-- 592
+++S G + L M INP + ++ ++D + + G EA L ++M
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 593 -PFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLD 628
D + S++ G H K E ++ D
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 145/338 (42%), Gaps = 43/338 (12%)
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
++L ++M+R G+S ++ T +++ C + L + K+G IV S+LL+
Sbjct: 29 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 88
Query: 341 AYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSS----KTLIS 396
Y + RI DA + D M I+
Sbjct: 89 GYCHGK-------------------------------RISDAVALVDQMVEMGYRPDTIT 117
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
+ +++ GL + SEA+ + RM + + ++ V++ + ++L + K
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGS 512
+E D +I +++D CK V+ +F M I+ + V++++++ + G S
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
+A L +M + P+ +TF A++ A G E L D M +I+P+I Y+ +
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSL 296
Query: 573 VDLYARAGCLGEAIDLIEEMPFQ---ADANMWFSVLRG 607
++ + L +A + E M + D + + ++++G
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 139/316 (43%), Gaps = 54/316 (17%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESL 83
+N +L T N L+ + + G +A +L D+M + + F++N+LI +++
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 84 RLFHAMPEKTHY----SWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV-----WNTIIHG 134
++F M K + ++N L+ F KS ++ LF M + GLV + T+I G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQG 369
Query: 135 YSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL-GACADCFALNCGKQVHARVIVEG 193
G A +FK M D V D + +L G C N GK A + +
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDG---VPPDIMTYSILLDGLC------NNGKLEKALEVFDY 420
Query: 194 I---ELEFDKVLCSSLVKFYGKCGDLDS------AARVAGVVKEVDDFSLSALVSG---- 240
+ E++ D + +++++ K G +D + + GV V + + ++SG
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV--VTYNTMISGLCSK 478
Query: 241 ------YANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
YA KM+E + DS +N++I ++ +G++ + L + MR
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGT------YNTLIRAHLRDGDKAASAELIREMRSCRFV 532
Query: 295 GDVST---VANILSAG 307
GD ST VAN+L G
Sbjct: 533 GDASTIGLVANMLHDG 548
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 121/618 (19%), Positives = 254/618 (41%), Gaps = 69/618 (11%)
Query: 9 GRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNT 68
G+ L+ + V +++ G ++ ++ + Q R G ++ D TN +W
Sbjct: 243 GKRLKTKAEQRVRWVEEGEEDTKMSNKSSWHQ--EREGSRKSLQRILD----TNGDNWQA 296
Query: 69 LIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----N 124
+I A F + + + + ++V + + GD+ A F+ M +
Sbjct: 297 VISA-------------FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPT 343
Query: 125 GLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLG----ACADCFALN 180
++ ++IH Y+ +ALS + M + +EM V+ A A + +
Sbjct: 344 SRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFD 403
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVK--FYGKCGDLDSAARVAGVVKEVDDFSLSA-- 236
K++H K L +S+ Y C + R +V+E+++ + A
Sbjct: 404 EAKRIH-------------KTLNASIYGKIIYAHCQTCN-MERAEALVREMEEEGIDAPI 449
Query: 237 -----LVSGYANAGKMREARRVFDSRVDQCA-----VLWNSIISGYVLNGEEMEALALFK 286
++ GY ++ VF R+ +C V + +I+ Y G+ +AL + +
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVF-KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSR 508
Query: 287 RMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
M+ GV ++ T + +++ L + K G+ D+++ + ++ A+
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 347 GPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSS----KTLISWN 398
A + E++ T +I Y+ G + + +FD M T+ ++N
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV 458
++ GL + +A++I M + + ++ ++ ++ AS + F +
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 459 GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEA 514
GL+ D +L+ CK G ++ V M I + +N ++ G+A G EA
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 515 LTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVD 574
L ++M+ GV+P T+T+ +SAC G + + M+ + P I+ Y+ ++
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME-ALGVKPNIKTYTTLIK 807
Query: 575 LYARAGCLGEAIDLIEEM 592
+ARA +A+ EEM
Sbjct: 808 GWARASLPEKALSCYEEM 825
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 117/591 (19%), Positives = 233/591 (39%), Gaps = 73/591 (12%)
Query: 27 ILNSSLTTANRLLQFYSRRGCLDDATQLFDEM------PQTNAFSWNTLIEAHLHSGHRN 80
I S T +++FY RRG + A + F+ M P + ++ +LI A+ +
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT--SLIHAYAVGRDMD 361
Query: 81 ESLRLFHAMPEK----THYSWNMLVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTII 132
E+L M E+ + +++++V F+K+G + A FD N ++ II
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 133 HGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVE 192
+ + + + +A +L + M + + DA + + D + + ++ V
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGI-----DAPI--AIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 193 GIELEFDKVLCSS--LVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREA 250
E F + + L+ Y K G + A V+ V+KE
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE---------------------- 512
Query: 251 RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
V ++ +I+G+V + A A+F+ M + G+ DV NI+SA C +
Sbjct: 513 -----EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM 567
Query: 311 ----LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTI-- 364
++ VK+M K+ ++ Y+KS + + F ++ +
Sbjct: 568 GNMDRAIQTVKEMQ----KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 365 --LLNTMITVYSNCGRIEDAKWIFDTMS----SKTLISWNSILVGLAKNACPSEAIDIFC 418
N +I ++E A I D M+ S ++ I+ G A +A + F
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 419 RMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG 478
R+ L +D F++ +++ AC ++ V + + + + L+D + + G
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 479 FVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
V + M +K D ++ + + + G + A EM GV+P+ T+T
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEA 585
++ L E+ + ++ MK I P+ Y C++ + EA
Sbjct: 804 TLIKGWARASLPEKALSCYEEMK-AMGIKPDKAVYHCLLTSLLSRASIAEA 853
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 214/523 (40%), Gaps = 71/523 (13%)
Query: 169 VLGACADCFALNCGKQVHARVIVEGIE---LEFDKVLCSSLVKFYGKCGDLDSAARVAGV 225
VL D +N V+ +I GI + F+ +L S K GDL+ ++
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF-----KAGDLERVDKIWLE 263
Query: 226 VK----EVDDFSLSALVSGYANAGKMREARRVF-DSRVDQCAVL---WNSIISGYVLNGE 277
+K E + + + L++G++ GKM EARR D R AV +N +I GY G
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 278 EMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASA 337
+A + M G+ ST + A C ++ +++ + D+V +
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNT 379
Query: 338 LLDAYSKSQGPHEACKFFGELKAYDT----ILLNTMITVYSNCGRIEDAKWIFDTMSSKT 393
L+ Y K EA F +L+A D + NT+I G +E A+ + + M+++
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 394 L----ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV----ISACASKSCL 445
+ I++ +++ G KN S A +++ M +K D +++ + + S
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 446 ELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG----FVEIGRKVFDGMIKTDEVSWNTI 501
L E++ T D I +D CK G +E RK+F + D V++ T+
Sbjct: 500 RLHEEMVA---TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
+ GY NG A L+ EM + PS IT+ ++ G +E+ MK
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR-G 615
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAA 621
+ P + ++ ++ +AG + EA R + KM
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAY---------------------------RYLCKMEE 648
Query: 622 EKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKNVQ 664
E I P N +Y L + E WE ++ + M+DK ++
Sbjct: 649 EGI----PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 155/363 (42%), Gaps = 27/363 (7%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEM------PQTNAFS 65
+ E R+ H ++G + + N L++ Y ++G DDA + DEM P T+ +
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYS-FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS--T 345
Query: 66 WNTLIEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPC--- 122
+N I A G +++ L +M S+N L+ + K G A LFD +
Sbjct: 346 YNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 405
Query: 123 -KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNC 181
+ + +NT+I G + G+ A L + M+ +++ D T++ L+
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT---QLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 182 GKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVD----DFSL-SA 236
+V+ ++ +GI+ + ++ + + GD D A R+ + D D ++ +
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGEL--RLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 237 LVSGYANAGKMREA----RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
+ G G + +A R++F + V + ++I GY+ NG+ A L+ M R
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
+ V T ++ +E Q K GV +++ +ALL K+ EA
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 353 KFF 355
++
Sbjct: 641 RYL 643
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/426 (19%), Positives = 173/426 (40%), Gaps = 53/426 (12%)
Query: 31 SLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESL--- 83
S T N L+ +S+ G +++A + +M ++ +S+N LIE + G +++
Sbjct: 272 SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVT 331
Query: 84 -RLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPR 142
+ +A T ++N+ + A G + A L SM + + +NT++HGY K G
Sbjct: 332 DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFV 391
Query: 143 KALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVL 202
+A LF + +H T++ + L +++ + + I D +
Sbjct: 392 EASLLFDDLRAGD---IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFP--DVIT 446
Query: 203 CSSLVKFYGKCGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREARRVFDS 256
++LVK + K G+L A V G+ + D ++ + G G +A R+ +
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGI--KPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 257 RV--DQCA---VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
V D A ++N I G G ++A+ +++ R G+ D T ++
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMIT 371
++ + ++ + + ++ L+ ++K+ +A ++ E+K
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV-------- 616
Query: 372 VYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS 431
+++ N++L G+ K EA C+M + +K+S
Sbjct: 617 -------------------RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYS 657
Query: 432 FASVIS 437
+ +IS
Sbjct: 658 YTMLIS 663
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%)
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLV 471
EA+++ + MD + C LE V I + D +++
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 472 DFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
+ Y C V+ KVF+ M + + + ++ + NGYG EA+ LF + G +P+
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGE 221
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
F V S C TG V+EG F M Y I P +EHY + + A +G L EA++ +E
Sbjct: 222 IFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVER 281
Query: 592 MPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLD 628
MP + ++W +++ HG+ +G AE + +LD
Sbjct: 282 MPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 172/377 (45%), Gaps = 20/377 (5%)
Query: 203 CSSLVKFYGKCGDLDSAARVAG-VVK---EVDDFSLSALVSGYANAGKMREARRVFDSRV 258
C+ L+ + +C L A G ++K E + +L++G+ ++ +A +FD V
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 259 ----DQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVE 314
V++N+II G + + AL L RM + G+ DV T +++S CS
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 315 LVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL--KAYDTILLNTMITV 372
+M + K + D+ +AL+DA K EA +F+ E+ ++ D ++ + +
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 373 YSNC--GRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
Y C R+++A+ +F M SK +++++ ++ G K+ + +FC M+ +
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
+ ++ +I L + E++F + + G+ + I L+ C G +E +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 487 FDGMIKT----DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
M K D V++N I+ G G ++A ++ + C G+ P T+T ++
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 543 TGLVEEGRNLFDTMKHN 559
GL E LF MK +
Sbjct: 479 KGLRREADALFRKMKED 495
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 145/320 (45%), Gaps = 13/320 (4%)
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
AL+ +M + G + T ++L+ C V M +G ++V+ + ++D
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 341 AYSKSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL-- 394
KS+ A ++ D + N++I+ + GR DA + M+ + +
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 395 --ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
++N+++ K SEA + + M L D +++ +I S L+ E++F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATN 508
G ++ G D + + L++ YCK VE G K+F M + + V++ ++ GY
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
G + A +FR M GV P+ IT+ +L G +E+ + M+ N ++ +I
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN-GMDADIVT 433
Query: 569 YSCMVDLYARAGCLGEAIDL 588
Y+ ++ +AG + +A D+
Sbjct: 434 YNIIIRGMCKAGEVADAWDI 453
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 138/327 (42%), Gaps = 13/327 (3%)
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
++L LF M + ++ + +LSA + ++V + +G+ H++ + LL
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 340 DAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTM----SS 391
+ + + A F G++ + +++ + R+ DA ++FD M
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
++ +N+I+ GL K+ A+D+ RM + D ++ S+IS S ++
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYAT 507
+ D +L+D K G V + ++ MI+ D V+++ ++ G
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE 567
EA +F M G P +T++ +++ + VE G LF M + +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 568 HYSCMVDLYARAGCLGEAIDLIEEMPF 594
Y+ ++ Y RAG L A ++ M F
Sbjct: 364 -YTILIQGYCRAGKLNVAEEIFRRMVF 389
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 173/452 (38%), Gaps = 68/452 (15%)
Query: 31 SLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLRLF 86
S+ +RLL S+ D L+++M N + N L+ + +L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 87 HAMPEKTH----YSWNMLVSAFAKSGDLQLAHSLFDSMPC----KNGLVWNTIIHGYSKR 138
M + H ++ L++ F + + A +FD M N +++NTII G K
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 139 GHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEF 198
AL L M D G D N ++ G
Sbjct: 200 KQVDNALDLLNRMEKD----------------GIGPDVVTYN--------SLISG----- 230
Query: 199 DKVLCSSLVKFYGKCGDLDSAARVAGVV--KEV--DDFSLSALVSGYANAGKMREARRVF 254
LCSS G A R+ + +E+ D F+ +AL+ G++ EA +
Sbjct: 231 ---LCSS--------GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 255 DSRV----DQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
+ + D V ++ +I G + EA +F M G DV T + +++ C
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 311 LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGEL----KAYDTILL 366
VE ++ + GV + V + L+ Y ++ + A + F + + I
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 367 NTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNM 422
N ++ + G+IE A I M ++++N I+ G+ K ++A DI+C +N
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC 459
Query: 423 LDLKMDKFSFASVISACASKSCLELGEQVFGK 454
L D +++ +++ K + +F K
Sbjct: 460 QGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 136/598 (22%), Positives = 231/598 (38%), Gaps = 113/598 (18%)
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSM----PCKNGLVWNTIIHGYSKRGHP-RKALSLFKT 150
++ ++ A++++G + A LF+ M P + +N I+ + K G RK L +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M L+ D +TVL ACA L K+ A + G E V ++L++ +
Sbjct: 272 MRSKGLKF---DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEP--GTVTYNALLQVF 326
Query: 211 GKCGDLDSAARVAGVVKE----VDDFSLSALVSGYANAGKMREARRVFDSRVDQC----A 262
GK G A V ++E D + + LV+ Y AG +EA V + + A
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS----------------- 305
+ + ++I Y G+E EAL LF M+ G + T +LS
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 306 ---AGCS--------LLVV-------ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQG 347
GCS +L + + V ++ G D + L+ AY +
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 348 PHEACKFFGELK---------AYDTIL------------------------------LNT 368
+A K +GE+ Y+ +L +
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 369 MITVYSNCG----------RIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFC 418
M+ Y+ G RI++ + M +TL+ N LA + A +F
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS---ERAFTLFK 623
Query: 419 RMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG 478
+ K D F S++S + + E + GL D + SL+D Y + G
Sbjct: 624 KHG---YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 479 FV----EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
EI + + +K D VS+NT++ G+ G EA+ + EM G+RP T+
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+S G+ E ++ + M N + P + +VD Y RAG EA+D + ++
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 122/561 (21%), Positives = 227/561 (40%), Gaps = 70/561 (12%)
Query: 94 HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV----WNTIIHGYSKRGHPRKALSLFK 149
H + V + +A L D +P + L+ + TI+H YS+ G KA+ LF+
Sbjct: 175 HQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFE 234
Query: 150 TMS-------------------------------LDPLEM--VHCDAGVLATVLGACADC 176
M LD + + D +TVL ACA
Sbjct: 235 RMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACARE 294
Query: 177 FALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE----VDDF 232
L K+ A + G E V ++L++ +GK G A V ++E D
Sbjct: 295 GLLREAKEFFAELKSCGYEP--GTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSIISGYVLNGEEMEALALFKRM 288
+ + LV+ Y AG +EA V + + A+ + ++I Y G+E EAL LF M
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 289 RRHGVSGDVSTVANILS----AGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSK 344
+ G + T +LS S +++++ M ++ C + + + +L
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC----SPNRATWNTMLALCGN 468
Query: 345 SQGPHEACKFFGELKA----YDTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLIS 396
+ F E+K+ D NT+I+ Y CG DA ++ M+ + + +
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
+N++L LA+ ++ M K + S+ S++ C +K LG + I
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSY-SLMLQCYAKGGNYLGIERIENRI 587
Query: 457 TVGLEFDH---IISTSLVDFYCKC-GFVEIGRKVFDGM-IKTDEVSWNTILMGYATNGYG 511
G F + + L +F C+ E +F K D V +N++L + N
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSC 571
+A + +R G+ P +T+ +++ G + + T++ + + P++ Y+
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS-QLKPDLVSYNT 706
Query: 572 MVDLYARAGCLGEAIDLIEEM 592
++ + R G + EA+ ++ EM
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEM 727
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 28/305 (9%)
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWI 385
+G VA+ LLD + + +++AY TIL YS G+ E A +
Sbjct: 185 LGRESQYSVAAKLLDKIPLQE-------YLLDVRAYTTIL-----HAYSRTGKYEKAIDL 232
Query: 386 FDTM----SSKTLISWNSILVGLAKNACP-SEAIDIFCRMNMLDLKMDKFSFASVISACA 440
F+ M S TL+++N IL K + + + M LK D+F+ ++V+SACA
Sbjct: 233 FERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACA 292
Query: 441 SKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF----VEIGRKVFDGMIKTDEV 496
+ L ++ F + + G E + +L+ + K G + + +++ + D V
Sbjct: 293 REGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 497 SWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
++N ++ Y G+ EA + M GV P+AIT+T V+ A G +E LF +M
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQ---ADANMWFSVLRGCIAHGN 613
K + P Y+ ++ L + E I ++ +M + W ++L C GN
Sbjct: 413 KEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC---GN 468
Query: 614 RTIGK 618
+ + K
Sbjct: 469 KGMDK 473
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/533 (20%), Positives = 232/533 (43%), Gaps = 36/533 (6%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNES----LRLFH 87
N LL +R G +D+ Q++ EM + N +++N ++ + G+ E+ ++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 88 AMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRK 143
A + +++ L+ + + DL A +F+ MP K N + + +IHG +
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 144 ALSLFKTMSLDP-LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVL 202
A+ LF M D V ++ ++ G+ ALN K++ I I VL
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY--TVL 364
Query: 203 CSSLVK--FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----S 256
SL + K +L G++ V + +AL++GY G + +A V +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNV--ITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 257 RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELV 316
++ +N +I GY + +A+ + +M V DV T +++ C +
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 317 KQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITV 372
++ + G+ D ++++D+ KS+ EAC F L+ + ++ +I
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 373 YSNCGRIEDAKWIFDTMSSKTLI----SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMD 428
Y G++++A + + M SK + ++N+++ GL + EA + +M + L+
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 429 KFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV----EIGR 484
+ +I + F + ++ G + D T+ + YC+ G + ++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 485 KVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
K+ + + D ++++++ GY G + A + + MR +G PS TF +++
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/521 (20%), Positives = 223/521 (42%), Gaps = 68/521 (13%)
Query: 97 WNMLVSAFAKSGDL----QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMS 152
+N L+++ A+ G + Q+ + + C N +N +++GY K G+ +A
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA-------- 237
Query: 153 LDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
Q ++++ G++ +F +SL+ Y +
Sbjct: 238 ------------------------------NQYVSKIVEAGLDPDF--FTYTSLIMGYCQ 265
Query: 213 CGDLDSAARVAGVVK----EVDDFSLSALVSGYANAGKMREARRVF-DSRVDQC---AVL 264
DLDSA +V + ++ + + L+ G A ++ EA +F + D+C
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHAC 324
+ +I + + EAL L K M G+ ++ T ++ + CS E +++
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIE 380
+ G+ +++ +AL++ Y K +A +++ +T N +I Y +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVH 444
Query: 381 DAKWIFDTMSSKTL----ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
A + + M + + +++NS++ G ++ A + MN L D++++ S+I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 437 -SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK--- 492
S C SK +E +F G+ + ++ T+L+D YCK G V+ + + M+
Sbjct: 505 DSLCKSKR-VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 493 -TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN 551
+ +++N ++ G +G EA L +M G++P+ T T ++ G + +
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 552 LFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
F M + P+ Y+ + Y R G L +A D++ +M
Sbjct: 624 RFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 129/615 (20%), Positives = 229/615 (37%), Gaps = 165/615 (26%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEM------PQTNAF- 64
+ R+L L+ G++ ++ T N L+ Y +RG ++DA + + M P T +
Sbjct: 374 FEKARELLGQMLEKGLM-PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 65 -------------------------------SWNTLIEAHLHSGHRNESLRLFHAMPEK- 92
++N+LI+ SG+ + + RL M ++
Sbjct: 433 ELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 93 ---THYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKA- 144
+++ ++ + KS ++ A LFDS+ K N +++ +I GY K G +A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 145 LSLFKTMSLDPLEMVHCDAGVL---ATVLGACADCFALNCGKQVHARVIVEGI------- 194
L L K +S + C L A + G CAD GK A ++ E +
Sbjct: 553 LMLEKMLSKN------CLPNSLTFNALIHGLCAD------GKLKEATLLEEKMVKIGLQP 600
Query: 195 ELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF 254
+ D +L L+K GD D A Y+ +M +
Sbjct: 601 TVSTDTILIHRLLKD----GDFDHA---------------------YSRFQQMLSSGTKP 635
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSA----GCSL 310
D+ + + I Y G ++A + +MR +GVS D+ T ++++ G +
Sbjct: 636 DAHT------YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 311 LVVELVKQMHAHACKIGVTHDIVVASALLD-AYSKSQGPHEACKFFGELKAYDTI--LLN 367
+++K+M C+ + + LL+ Y K +G + +DT+ LL
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 368 TMI--TVYSNC-------------GRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSE 412
M+ +V N G + A+ +FD M IS PSE
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS-------------PSE 796
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG----LEFDHIIST 468
+ F +++S C +V I VG LE ++
Sbjct: 797 LV-----------------FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 469 SLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTLFREMRCS 524
L K G E G VF +++ DE++W I+ G G LF M +
Sbjct: 840 GLY----KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
Query: 525 GVRPSAITFTAVLSA 539
G + S+ T++ ++
Sbjct: 896 GCKFSSQTYSLLIEG 910
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 139/669 (20%), Positives = 271/669 (40%), Gaps = 84/669 (12%)
Query: 13 REGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NAFSWNT 68
RE +Q+ G++ S+T N +++ YS+ G +D+A +L EM + + N+
Sbjct: 485 REAKQIFYGLKDIGLVPDSVT-YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 69 LIEAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK- 123
LI + +E+ ++F M E T ++N L++ K+G +Q A LF+ M K
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 124 ---NGLVWNTIIHGYSKRGHPRKALS-LFKTMSLDPLEMVHCDAGVLATVLGACADCFAL 179
N + +NT+ K AL LFK M + G D F
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-----------------GCVPDVFTY 646
Query: 180 NCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV---DDFSLSA 236
N I+ G+ K G + A +K++ D +L
Sbjct: 647 N--------TIIFGLV----------------KNGQVKEAMCFFHQMKKLVYPDFVTLCT 682
Query: 237 LVSGYANAGKMREARRVFDSRVDQCA-----VLWNSIISGYVLNGEEMEALALFKRMRRH 291
L+ G A + +A ++ + + CA + W +I + A++ +R+ +
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 292 GVSGD-VSTVANILSAGCSLLVVELVKQMHAHACK-IGVTHDIVVASALLDAYSKSQGPH 349
G+ D S + I+ C V + + K +GV + + L+ ++
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 350 EACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSS----KTLISWNSIL 401
A F ++K+ D N ++ Y G+I++ ++ MS+ I+ N ++
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 402 VGLAKNACPSEAIDIFCR-MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGL 460
GL K +A+D++ M+ D ++ +I + L +Q+F + G
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 461 EFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALT 516
+ I L++ + K G + +F M+K D +++ ++ G E L
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 517 LFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLY 576
F+E++ SG+ P + + +++ + +EE LF+ MK + I P++ Y+ ++
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 577 ARAGCLGEAIDLIEEMP---FQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQ--LDPEN 631
AG + EA + E+ + + + +++RG G + ++ P N
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP-N 1101
Query: 632 PGAYIQLSN 640
G Y QL N
Sbjct: 1102 TGTYEQLPN 1110
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 136/585 (23%), Positives = 231/585 (39%), Gaps = 58/585 (9%)
Query: 22 FLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSG 77
++ I+ T + + S +G L A +M + NA+S+N LI L S
Sbjct: 143 LMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSR 202
Query: 78 HRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPC----KNGLV 127
E++ ++ M P YS L+ K D+ L M N
Sbjct: 203 FCTEAMEVYRRMILEGFRPSLQTYSS--LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260
Query: 128 WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA--LNCGKQV 185
+ I + G +A + K M + C V+ + A C A L+C K+V
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDE-----GCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV------AGVVKEVDDFSLSALVS 239
+ ++ + D+V +L+ + DLDS + G V +V F++ LV
Sbjct: 316 FEK--MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI--LVD 371
Query: 240 GYANAGKMREARRVFDSRVDQCAV----LWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
AG EA D DQ + +N++I G + +AL LF M GV
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 296 DVSTVANIL----SAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEA 351
T + +G S+ +E ++M G+ +IV +A L + +K+ EA
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTK----GIAPNIVACNASLYSLAKAGRDREA 487
Query: 352 CKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTM----SSKTLISWNSILVG 403
+ F LK D++ N M+ YS G I++A + M +I NS++
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 404 LAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFD 463
L K EA +F RM + LK ++ ++++ ++ ++F + G +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 464 HIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTLFR 519
I +L D CK V + K+ M+ D ++NTI+ G NG EA+ F
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINP 564
+M+ V P +T +L L+E+ + +N P
Sbjct: 668 QMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 393 TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
+L +++S++VGL K + + M L LK + ++F I + ++
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI----KTDEVSWNTILMGYATN 508
+ G D + T L+D C ++ ++VF+ M K D V++ T+L ++ N
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
+ EM G P +TFT ++ A G E + D M+ + I P +
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR-DQGILPNLHT 400
Query: 569 YSCMVDLYARAGCLGEAIDLIEEM 592
Y+ ++ R L +A++L M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNM 424
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 126/558 (22%), Positives = 244/558 (43%), Gaps = 77/558 (13%)
Query: 48 LDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNM 99
++DA QLFDEM + ++NTLI+ + +G+ +S ++ M E + ++N
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 100 LVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
L+ K+G ++ A ++ M + ++ + GYS AL +++T
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD 215
++M +A + +L A + +++ R + +G L ++V+ ++++ Y + GD
Sbjct: 350 VKM---NAYTCSILLNALCKEGKIEKAEEILGREMAKG--LVPNEVIYNTMIDGYCRKGD 404
Query: 216 LDSA-ARVAGVVKE---VDDFSLSALVSGYANAGKMREARRVFDSR----VDQCAVLWNS 267
L A ++ + K+ D + + L+ + G+M A + + V +N
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDV---STVANILSAGCSLLVVELVKQMHAHAC 324
+I GY E + + K M +G +V T+ N L G LL ++VK+
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR- 523
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKW 384
GV+ + + + L+D C + G+IEDA
Sbjct: 524 --GVSPKVRIYNMLIDG---------CC----------------------SKGKIEDAFR 550
Query: 385 IFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVIS--- 437
M K L+++N+++ GL+ SEA D+ ++ LK D F++ S+IS
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 438 -ACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM-IKTDE 495
A + C+ L E++ I L+ H+ L+ K G +E+ ++F M +K D
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHL----LISLCTKEG-IELTERLFGEMSLKPDL 665
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT 555
+ +N +L YA +G +A L ++M + T+ +++ G + E R+L D
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 556 MKHNYNINPEIEHYSCMV 573
M + PE + Y+ +V
Sbjct: 726 MNAR-EMEPEADTYNIIV 742
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 125/595 (21%), Positives = 241/595 (40%), Gaps = 98/595 (16%)
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHYS----WNMLVSAFAKSGDLQLAHS 115
+ + F + I+A + + L LF+ M Y +N+L+ K + A
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 116 LFDSMPCKNGL----VWNTIIHGYSKRGHPRKALSLFKTMSLDPLE-------------- 157
LFD M + L +NT+I GY K G+P K+ + + M D +E
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 158 ---MVHCDAGVLATV--LGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGK 212
MV VL + LG D F + ++ +G SS K
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFS--------ILFDGY---------SSNEKAEAA 338
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSI 268
G ++A +GV +++ ++ S L++ GK+ +A + + + V++N++
Sbjct: 339 LGVYETAVD-SGV--KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGV 328
I GY G+ + A + M + G+ D ++ C L +E ++ GV
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 329 THDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDT 388
+ + + L+ Y + +E K F LK + D
Sbjct: 456 SPSVETYNILIGGYGRK---YEFDKCFDILKEME------------------------DN 488
Query: 389 MSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
+ ++S+ +++ L K + EA + M + + +I C SK +E
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCG--------FVEIGRKVFDGMIKTDEVSWNT 500
+ + + G+E + + +L+D G +EI RK +K D ++N+
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK----GLKPDVFTYNS 604
Query: 501 ILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNY 560
++ GY G + L+ EM+ SG++P+ T+ ++S C G +E LF M
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---- 659
Query: 561 NINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA---DANMWFSVLRGCIAHG 612
++ P++ Y+ ++ YA G + +A +L ++M ++ D + S++ G + G
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 413 AIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVD 472
I++F + D + KF + I A S + G ++F + + I L+D
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 473 FYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRP 528
CK + ++FD M+ +++NT++ GY G ++ + M+ + P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 529 SAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYA 577
S ITF +L G+VE+ N+ MK + P+ +S + D Y+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMK-DLGFVPDAFTFSILFDGYS 330
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/520 (21%), Positives = 216/520 (41%), Gaps = 79/520 (15%)
Query: 65 SWNTLIEAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFDSM 120
++N LI+A + ++ + MP ++ ++ + + GDL A + + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 121 PCKNGLVW-----NTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACAD 175
+ G W N I+HG+ K G AL+ + MS G D
Sbjct: 251 -VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD---------------GFFPD 294
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVV----KEVDD 231
+ N +V G LC K G + A + V+ + D
Sbjct: 295 QYTFN--------TLVNG--------LC--------KAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 232 FSLSALVSGYANAGKMREARRVFDSRVDQ-CA---VLWNSIISGYVLNGEEMEALALFKR 287
++ ++++SG G+++EA V D + + C+ V +N++IS + EA L +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 288 MRRHGVSGDVSTVANILSAGC----SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
+ G+ DV T +++ C + +EL ++M + C+ D + L+D+
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE----PDEFTYNMLIDSLC 446
Query: 344 KSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLI 395
EA +++ A I NT+I + + +A+ IFD M S+ +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
++N+++ GL K+ +A + +M M K DK+++ S+++ ++ +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYG 511
+ G E D + +L+ CK G VE+ K+ + I ++N ++ G
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 512 SEALTLFREM-RCSGVRPSAITFTAVLSA-CDHTGLVEEG 549
+EA+ LFREM + P A+++ V C+ G + E
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREA 666
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/342 (18%), Positives = 142/342 (41%), Gaps = 16/342 (4%)
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHAC 324
+N +I + A+ + + M +G+ D T ++ ++ ++
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL-----LNTMITVYSNCGRI 379
+ G + V + ++ + K +A F E+ D NT++ G +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 380 EDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASV 435
+ A I D M + + ++NS++ GL K EA+++ +M D + ++ ++
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 436 ISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----I 491
IS ++ +E ++ + G+ D SL+ C + ++F+ M
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 492 KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRN 551
+ DE ++N ++ + G EAL + ++M SG S IT+ ++ E
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 552 LFDTMK-HNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+FD M+ H + N Y+ ++D ++ + +A L+++M
Sbjct: 492 IFDEMEVHGVSRNSVT--YNTLIDGLCKSRRVEDAAQLMDQM 531
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 184/404 (45%), Gaps = 25/404 (6%)
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSI 268
C + ++ + E + + S L++G G++ EA + D V+ + N++
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 269 ISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC----SLLVVELVKQMHAHAC 324
++G L+G+E EA+ L +M +G + T +L+ C + L +EL+++M
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 325 KIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIE 380
K+ D V S ++D K A F E++ + I N +I + N GR +
Sbjct: 260 KL----DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 381 D-AKWIFDTMSSK---TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVI 436
D AK + D + K +++++ ++ K EA ++ M + D ++ S+I
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IK 492
++ L+ Q+ ++ G + + L++ YCK ++ G ++F M +
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNL 552
D V++NT++ G+ G + A LF+EM V P+ +T+ +L G E+ +
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 553 FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
F+ ++ + + +I Y+ ++ A + +A DL +P +
Sbjct: 496 FEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 108/507 (21%), Positives = 199/507 (39%), Gaps = 93/507 (18%)
Query: 60 QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH----YSWNMLVSAFAKSGDLQLAHS 115
+ N +++TLI G +E+L L M E H + N LV+ SG A
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 116 LFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACAD 175
L D M + G N + +G P+ V C +G A
Sbjct: 215 LIDKM-VEYGCQPNAVTYG--------------------PVLNVMCKSGQTA-------- 245
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA------ARVAGVVKEV 229
A+ +++ R I + D V S ++ K G LD+A + G+ +
Sbjct: 246 -LAMELLRKMEERNI------KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 230 DDFSLSALVSGYANAGKMREA----RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALF 285
+++ L+ G+ NAG+ + R + +++ V ++ +I +V G+ EA L
Sbjct: 299 ITYNI--LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
K M G++ D T +++ C ++ QM G +I + L++ Y K+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 346 QGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISW 397
+ + F ++ DT+ NT+I + G++ AK +F M S+ ++++
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 398 NSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAIT 457
+L GL N +A++IF ++ +++D + +I + S ++ +F
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF----- 531
Query: 458 VGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTL 517
C G +K ++N ++ G G SEA L
Sbjct: 532 -------------------CSLPLKG-------VKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 518 FREMRCSGVRPSAITFTAVLSACDHTG 544
FR+M G P T+ ++ A H G
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRA--HLG 590
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 191/467 (40%), Gaps = 58/467 (12%)
Query: 2 SMELQGIGRTLR----------EGRQLHVSFLKTGIL-----NSSLTTANRLLQFYSRRG 46
MEL+GI L R+L ++F G + + T + L+ G
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 47 CLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLFHAMPE----KTHYSWN 98
+ +A +L D M + + + NTL+ SG E++ L M E ++
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 99 MLVSAFAKSGDLQLAHSLFDSMPCKN----GLVWNTIIHGYSKRGHPRKALSLFKTMSLD 154
+++ KSG LA L M +N + ++ II G K G A +LF M +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 155 PLEMVHCDAGVLATVLGACADCFALNCGK-QVHARVIVEGIELEFDK--VLCSSLVKFYG 211
+ +L + G C N G+ A+++ + I+ + + V S L+ +
Sbjct: 293 GITTNIITYNIL--IGGFC------NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 212 KCGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRV----DQC 261
K G L A + G+ D + ++L+ G+ + +A ++ D V D
Sbjct: 345 KEGKLREAEELHKEMIHRGIAP--DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
+N +I+GY + L LF++M GV D T ++ C L + + K++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA----YDTILLNTMITVYSNCG 377
V +IV LLD + +A + F +++ D + N +I N
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 378 RIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRM 420
+++DA +F ++ K + ++N ++ GL K SEA +F +M
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 311 LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMI 370
LV+ L KQM G+ H++ S +++ + + + +
Sbjct: 106 LVLALCKQMELK----GIAHNLYTLSIMINCFCRCR---------------------KLC 140
Query: 371 TVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKF 430
+S G+I + +T++ TLI+ GL SEA+++ RM + K D
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLIN------GLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 431 SFASVISA-CASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG----FVEIGRK 485
+ ++++ C S E + K + G + + + +++ CK G +E+ RK
Sbjct: 195 TINTLVNGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 486 VFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
+ + IK D V ++ I+ G +G A LF EM G+ + IT+ ++ + G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
++G L M INP + +S ++D + + G L EA +L +EM
Sbjct: 314 WDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 171/410 (41%), Gaps = 57/410 (13%)
Query: 237 LVSGYANAGKMREARRVFDSRVDQCAVL-----WNSIISGYVLNGEEMEALALFKRMRRH 291
L+ Y + ++ + VF + + ++L ++++ G V A+ LF M
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 292 GVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEA 351
G+ DV ++ + C L + K+M AH G +IV + L+D K Q EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 352 CKFFGELKAYDTILLNTMIT----VYSNC------------------------------- 376
+L D L ++T VY C
Sbjct: 282 VGIKKDLAGKD--LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 377 ------GRIEDA----KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLK 426
G+IE+A K + D S L +N+++ L K EA +F RM + L+
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 427 MDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKV 486
+ +++ +I + L+ G+ + GL+ SL++ +CK G +
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 487 FDGMI----KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDH 542
MI + V++ +++ GY + G ++AL L+ EM G+ PS TFT +LS
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 543 TGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
GL+ + LF+ M +N+ P Y+ M++ Y G + +A + ++EM
Sbjct: 520 AGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/536 (19%), Positives = 209/536 (38%), Gaps = 68/536 (12%)
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPC----KNGLVWNTIIHGYSKRGHPRKALSLFKTM 151
++ LV K + ++ + D M C + ++++ G KRG +AL+L K +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 152 SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYG 211
D GV + A +L G++ H EL FD++ G
Sbjct: 359 ---------VDFGVSPNLFVYNALIDSLCKGRKFHE------AELLFDRM---------G 394
Query: 212 KCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL----WNS 267
K G +D + S L+ + GK+ A VD L +NS
Sbjct: 395 KIG------------LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 268 IISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG 327
+I+G+ G+ A M + V T +++ CS + +++ G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 328 VTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDT----ILLNTMITVYSNCGRIEDAK 383
+ I + LL ++ +A K F E+ ++ + N MI Y G + A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 384 WIFDTMSSKTLI----SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISAC 439
M+ K ++ S+ ++ GL SEA ++ + ++++ + ++
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 440 ASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG----FVEIGRKVFDGMIKTDE 495
+ LE V + + G++ D + L+D K F + +++ D +K D+
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 496 VSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDT 555
V + +++ + G EA ++ M G P+ +T+TAV++ G V E L
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 556 MKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAH 611
M+ ++ P Y C +D+ + E+ Q + ++L+G +A+
Sbjct: 743 MQPVSSV-PNQVTYGCFLDILTKG-----------EVDMQKAVELHNAILKGLLAN 786
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 195/500 (39%), Gaps = 81/500 (16%)
Query: 9 GRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NAF 64
GR E L K G L + T + L+ + RRG LD A EM T + +
Sbjct: 380 GRKFHEAELLFDRMGKIG-LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 65 SWNTLIEAHLH-----------------------------------SGHRNESLRLFHAM 89
+N+LI H G N++LRL+H M
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 90 PEK----THYSWNMLVSAFAKSGDLQLAHSLFDSMP----CKNGLVWNTIIHGYSKRGHP 141
K + Y++ L+S ++G ++ A LF+ M N + +N +I GY + G
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 142 RKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGI---ELEF 198
KA K M+ + V + G C G+ A+V V+G+ E
Sbjct: 559 SKAFEFLKEMTEKGI--VPDTYSYRPLIHGLCLT------GQASEAKVFVDGLHKGNCEL 610
Query: 199 DKVLCSSLVKFYGKCGDLDSAARVAG--VVKEVDDFSLSALVSGYANAGKMR-EARRVF- 254
+++ + L+ + + G L+ A V V + VD L + G G ++ + R++F
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD---LDLVCYGVLIDGSLKHKDRKLFF 667
Query: 255 -------DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAG 307
D + V++ S+I G+ EA ++ M G + T +++
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 308 CSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ-GPHEACKFFGE-LKAY--DT 363
C V + + + + + V LD +K + +A + LK +T
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTM----SSKTLISWNSILVGLAKNACPSEAIDIFCR 419
N +I + GRIE+A + M S I++ +++ L + +AI+++
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 420 MNMLDLKMDKFSFASVISAC 439
M ++ D+ ++ ++I C
Sbjct: 848 MTEKGIRPDRVAYNTLIHGC 867
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 165/405 (40%), Gaps = 38/405 (9%)
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
+S++ G G+ EAL L KR+ GVS ++ ++ + C + + K
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWI 385
IG+ + V S L+D + + A F GE+
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM--------------------------- 428
Query: 386 FDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCL 445
DT ++ +NS++ G K S A M L+ ++ S++ SK +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 446 ELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTI 501
+++ + G+ T+L+ + G + K+F+ M +K + V++N +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 502 LMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYN 561
+ GY G S+A +EM G+ P ++ ++ TG E + D + H N
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL-HKGN 607
Query: 562 INPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA---DANMWFSVLRGCIAHGNRTI-- 616
Y+ ++ + R G L EA+ + +EM + D + ++ G + H +R +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 617 GKMAAEKIIQLDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDK 661
G + L P++ Y + + + + D++ + + +LMI++
Sbjct: 668 GLLKEMHDRGLKPDDV-IYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 163/396 (41%), Gaps = 37/396 (9%)
Query: 31 SLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLF 86
S+ T LL R G + DA +LF+EM + N ++N +IE + G +++
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 87 HAMPEK----THYSWNMLVSAFAKSGDLQLAHSLFDSM---PCK-NGLVWNTIIHGYSKR 138
M EK YS+ L+ +G A D + C+ N + + ++HG+ +
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 139 GHPRKALSLFKTMSLDPLEM-VHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELE 197
G +ALS+ + M +++ + C ++ L K++H R L+
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR------GLK 679
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREAR 251
D V+ +S++ K GD A + G V ++ + +A+++G AG + EA
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP--NEVTYTAVINGLCKAGFVNEA- 736
Query: 252 RVFDSRVDQCAVLWNSIISGYVLN----GE-EMEALALFKRMRRHGVSGDVSTVANILSA 306
V S++ + + N + G L+ GE +M+ G+ + +T ++
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 307 GCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----D 362
C +E ++ GV+ D + + +++ + +A + + + D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWN 398
+ NT+I G + A + + M + LI N
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 134/601 (22%), Positives = 249/601 (41%), Gaps = 63/601 (10%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMPQTN-AFSWNTLIEAHLHSGHRN---------ESLRL 85
N LL +R D Q+ EM S NT IE L N + +R
Sbjct: 102 NSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRK 161
Query: 86 FHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSM------PCKNGLVWNTIIHGYSKRG 139
F P + Y+ L+ AF+ + +LF M P + ++ T+I G++K G
Sbjct: 162 FKFRPAFSAYT--TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH--LFTTLIRGFAKEG 217
Query: 140 HPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE---L 196
ALSL LD ++ DA ++ + C D F GK A IE L
Sbjct: 218 RVDSALSL-----LDEMKSSSLDADIV--LYNVCIDSFG-KVGKVDMAWKFFHEIEANGL 269
Query: 197 EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVD----DFSLSALVSGYANAGKMREARR 252
+ D+V +S++ K LD A + +++ ++ + ++ GY +AGK EA
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 253 VFDSRVDQ----CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
+ + + + + +N I++ G+ EAL +F+ M++ ++ST ++ C
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLC 388
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK----AYDTI 364
++ ++ K G+ ++ + ++D KSQ EAC F E+ D I
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTM----SSKTLISWNSILVGLAKNACPSEAIDIFCRM 420
++I GR++DA +++ M I + S++ + + I+ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 421 NMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS-----LVDFYC 475
+ D + C K+ GE G+A+ ++ + + L+
Sbjct: 509 INQNCSPD-LQLLNTYMDCMFKA----GEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 476 KCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAI 531
K GF ++F M + D ++N ++ G+ G ++A L EM+ G P+ +
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE 591
T+ +V+ ++E LF+ K I + YS ++D + + G + EA ++EE
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 592 M 592
+
Sbjct: 683 L 683
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 121/608 (19%), Positives = 253/608 (41%), Gaps = 53/608 (8%)
Query: 23 LKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGH 78
+K+ L++ + N + + + G +D A + F E+ + + ++ ++I +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 79 RNESLRLFHAMPEKTH----YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGL----VWNT 130
+E++ +F + + Y++N ++ + +G A+SL + K + +N
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 131 IIHGYSKRGHPRKALSLFKTMSLDP----------LEMVHCDAGVLATVLGACADCFALN 180
I+ K G +AL +F+ M D ++M+ C AG L T F L
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDML-CRAGKLDTA-------FELR 400
Query: 181 CGKQVHARVI-VEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVS 239
Q V + + D+ LC S K C + + V D+ + +L+
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDR-LCKS-QKLDEACAMFEE---MDYKVCTPDEITFCSLID 455
Query: 240 GYANAGKMREARRVFDSRVD-QC---AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
G G++ +A +V++ +D C ++++ S+I + +G + + ++K M S
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 296 DVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFF 355
D+ + + E + M D S L+ K+ +E + F
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 356 GELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKN 407
+K DT N +I + CG++ A + + M +K T++++ S++ GLAK
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 408 ACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIS 467
EA +F ++++ ++S+I ++ + + + GL +
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 468 TSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTLFREMRC 523
SL+D K + F M + ++V++ ++ G ++A ++EM+
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 524 SGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLG 583
G++PS I++T ++S G + E LFD K N + P+ Y+ M++ +
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAMIEGLSNGNRAM 814
Query: 584 EAIDLIEE 591
+A L EE
Sbjct: 815 DAFSLFEE 822
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 163/432 (37%), Gaps = 57/432 (13%)
Query: 5 LQGIGRTLR--EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTN 62
+ G+G+ R + +++ L + +S+ + + F++ G +D +++ +M N
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH-GRKEDGHKIYKDMINQN 512
Query: 63 AFS----WNTLIEAHLHSGHRNESLRLFHAMPEKTHY----SWNMLVSAFAKSGDLQLAH 114
NT ++ +G + +F + + S+++L+ K+G +
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 115 SLFDSMPCKNGLV-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATV 169
LF SM + G V +N +I G+ K G KA L + M E G +V
Sbjct: 573 ELFYSMK-EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG---SV 628
Query: 170 LGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV 229
+ A L+ + + IEL + V+ SSL+ +GK G +D A + +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIEL--NVVIYSSLIDGFGKVGRIDEAYLI------L 680
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMR 289
++ L WNS++ V E EAL F+ M+
Sbjct: 681 EELMQKGLTPNLYT---------------------WNSLLDALVKAEEINEALVCFQSMK 719
Query: 290 RHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPH 349
+ + T +++ C + K G+ + + ++ +K+
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 350 EACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS----IL 401
EA F KA D+ N MI SN R DA +F+ + L N +L
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 402 VGLAKNACPSEA 413
L KN C +A
Sbjct: 840 DTLHKNDCLEQA 851
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 121/573 (21%), Positives = 234/573 (40%), Gaps = 95/573 (16%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQL--FDEMPQTNAFSWNTL 69
LRE R++ L G++ S+ + N L S+ C AT + F E P+ WN
Sbjct: 191 LREARRVFEKMLNYGLV-LSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEVGV-CWNVA 247
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NG 125
S+N+++ + G ++ AH L M K +
Sbjct: 248 --------------------------SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 281
Query: 126 LVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQV 185
+ ++T+++GY + G K L + M L+ ++ + +++G L ++
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP---NSYIYGSIIGLLCRICKLAEAEEA 338
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE----VDDFSLSALVSGY 241
+ +I +GI D V+ ++L+ + K GD+ +A++ + D + +A++SG+
Sbjct: 339 FSEMIRQGILP--DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 242 ANAGKMREARRVFDSR----VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDV 297
G M EA ++F ++ +V + +I+GY G +A + M + G S +V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 298 STVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGE 357
T ++ C ++ ++ KIG+ +I +++++ KS EA K GE
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 358 LKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNAC 409
+A DT+ T++ Y G ++ A+ I M K T++++N ++ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG------ 570
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
FC ML E GE++ + G+ + S
Sbjct: 571 -------FCLHGML----------------------EDGEKLLNWMLAKGIAPNATTFNS 601
Query: 470 LVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
LV YC ++ ++ M + D ++ ++ G+ EA LF+EM+ G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 526 VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
S T++ ++ E R +FD M+
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 179/407 (43%), Gaps = 42/407 (10%)
Query: 199 DKVLCSSLVKFYGKCGDLDSAARVAGVVK----EVDDFSLSALVSGYANAGKMREARRVF 254
D + S++V Y + G+LD ++ V+K + + + +++ K+ EA F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 255 DSRVDQC----AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
+ Q V++ ++I G+ G+ A F M ++ DV T I+S C +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 311 -LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
+VE K H CK G+ D V + L++ Y K+ +A + + N M
Sbjct: 400 GDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFR-----------VHNHM 447
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
I + C S ++++ +++ GL K A ++ M + L+ +
Sbjct: 448 IQ--AGC--------------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
F++ S+++ +E ++ G+ GL D + T+L+D YCK G ++ +++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 490 M----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
M ++ V++N ++ G+ +G + L M G+ P+A TF +++
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
++ ++ M + + P+ + Y +V + +A + EA L +EM
Sbjct: 612 LKAATAIYKDM-CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 168/366 (45%), Gaps = 20/366 (5%)
Query: 245 GKMREARRVFDSRVDQCAVLWNSIISGYVLN-----GEEMEALALFKRMRRHGVSGDVST 299
G +REARRVF+ ++ VL + Y+ + A+ +F+ GV +V++
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
++ C L ++ + G T D++ S +++ Y + + K +K
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 360 ----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS----WNSILVGLAKNACPS 411
++ + ++I + ++ +A+ F M + ++ + +++ G K
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISA-CASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
A F M+ D+ D ++ ++IS C +E G ++F + GLE D + T L
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTEL 427
Query: 471 VDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYGSEALTLFREMRCSGV 526
++ YCK G ++ +V + MI+ + V++ T++ G G A L EM G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
+P+ T+ ++++ +G +EE L + +N + Y+ ++D Y ++G + +A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 587 DLIEEM 592
++++EM
Sbjct: 547 EILKEM 552
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 33/312 (10%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NA 63
IG + G+ H F K L T L+ Y + G + DA ++ + M Q N
Sbjct: 399 IGDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 64 FSWNTLIEAHLHSGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQLAHSLFDS 119
++ TLI+ G + + L H M + +++N +V+ KSG+++ A L
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 120 MPCK----NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACAD 175
+ + + T++ Y K G KA + K M L+ VL G C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN--GFCLH 574
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV------ 229
L G+++ ++ +GI + +SLVK Y +L +A + K++
Sbjct: 575 GM-LEDGEKLLNWMLAKGIAP--NATTFNSLVKQYCIRNNLKAAT---AIYKDMCSRGVG 628
Query: 230 -DDFSLSALVSGYANAGKMREARRVFDSRVDQ----CAVLWNSIISGYVLNGEEMEALAL 284
D + LV G+ A M+EA +F + ++ +I G++ + +EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 285 FKRMRRHGVSGD 296
F +MRR G++ D
Sbjct: 689 FDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 121/573 (21%), Positives = 234/573 (40%), Gaps = 95/573 (16%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQL--FDEMPQTNAFSWNTL 69
LRE R++ L G++ S+ + N L S+ C AT + F E P+ WN
Sbjct: 191 LREARRVFEKMLNYGLV-LSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEVGV-CWNVA 247
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NG 125
S+N+++ + G ++ AH L M K +
Sbjct: 248 --------------------------SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 281
Query: 126 LVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQV 185
+ ++T+++GY + G K L + M L+ ++ + +++G L ++
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP---NSYIYGSIIGLLCRICKLAEAEEA 338
Query: 186 HARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE----VDDFSLSALVSGY 241
+ +I +GI D V+ ++L+ + K GD+ +A++ + D + +A++SG+
Sbjct: 339 FSEMIRQGILP--DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 242 ANAGKMREARRVFDSR----VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDV 297
G M EA ++F ++ +V + +I+GY G +A + M + G S +V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 298 STVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGE 357
T ++ C ++ ++ KIG+ +I +++++ KS EA K GE
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 358 LKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNAC 409
+A DT+ T++ Y G ++ A+ I M K T++++N ++ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG------ 570
Query: 410 PSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTS 469
FC ML E GE++ + G+ + S
Sbjct: 571 -------FCLHGML----------------------EDGEKLLNWMLAKGIAPNATTFNS 601
Query: 470 LVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSG 525
LV YC ++ ++ M + D ++ ++ G+ EA LF+EM+ G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 526 VRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
S T++ ++ E R +FD M+
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 179/407 (43%), Gaps = 42/407 (10%)
Query: 199 DKVLCSSLVKFYGKCGDLDSAARVAGVVK----EVDDFSLSALVSGYANAGKMREARRVF 254
D + S++V Y + G+LD ++ V+K + + + +++ K+ EA F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 255 DSRVDQC----AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
+ Q V++ ++I G+ G+ A F M ++ DV T I+S C +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 311 -LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
+VE K H CK G+ D V + L++ Y K+ +A + + N M
Sbjct: 400 GDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFR-----------VHNHM 447
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
I + C S ++++ +++ GL K A ++ M + L+ +
Sbjct: 448 IQ--AGC--------------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDG 489
F++ S+++ +E ++ G+ GL D + T+L+D YCK G ++ +++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 490 M----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
M ++ V++N ++ G+ +G + L M G+ P+A TF +++
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
++ ++ M + + P+ + Y +V + +A + EA L +EM
Sbjct: 612 LKAATAIYKDM-CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 168/366 (45%), Gaps = 20/366 (5%)
Query: 245 GKMREARRVFDSRVDQCAVLWNSIISGYVLN-----GEEMEALALFKRMRRHGVSGDVST 299
G +REARRVF+ ++ VL + Y+ + A+ +F+ GV +V++
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 300 VANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELK 359
++ C L ++ + G T D++ S +++ Y + + K +K
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 360 ----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLIS----WNSILVGLAKNACPS 411
++ + ++I + ++ +A+ F M + ++ + +++ G K
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 412 EAIDIFCRMNMLDLKMDKFSFASVISA-CASKSCLELGEQVFGKAITVGLEFDHIISTSL 470
A F M+ D+ D ++ ++IS C +E G ++F + GLE D + T L
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTEL 427
Query: 471 VDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYGSEALTLFREMRCSGV 526
++ YCK G ++ +V + MI+ + V++ T++ G G A L EM G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 527 RPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAI 586
+P+ T+ ++++ +G +EE L + +N + Y+ ++D Y ++G + +A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 587 DLIEEM 592
++++EM
Sbjct: 547 EILKEM 552
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 33/312 (10%)
Query: 8 IGRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NA 63
IG + G+ H F K L T L+ Y + G + DA ++ + M Q N
Sbjct: 399 IGDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 64 FSWNTLIEAHLHSGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQLAHSLFDS 119
++ TLI+ G + + L H M + +++N +V+ KSG+++ A L
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 120 MPCK----NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACAD 175
+ + + T++ Y K G KA + K M L+ VL G C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN--GFCLH 574
Query: 176 CFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV------ 229
L G+++ ++ +GI + +SLVK Y +L +A + K++
Sbjct: 575 GM-LEDGEKLLNWMLAKGIAP--NATTFNSLVKQYCIRNNLKAAT---AIYKDMCSRGVG 628
Query: 230 -DDFSLSALVSGYANAGKMREARRVFDSRVDQ----CAVLWNSIISGYVLNGEEMEALAL 284
D + LV G+ A M+EA +F + ++ +I G++ + +EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 285 FKRMRRHGVSGD 296
F +MRR G++ D
Sbjct: 689 FDQMRREGLAAD 700
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 212/516 (41%), Gaps = 51/516 (9%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKALSLFKT 150
Y+ N++V+A K G ++ + + K + + +NT+I YS +G +A L
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M P + TV+ K+V A ++ G L D SL+
Sbjct: 296 M---PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG--LSPDSTTYRSLLMEA 350
Query: 211 GKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIIS 270
K GD+ +V FS MR V D V ++S++S
Sbjct: 351 CKKGDVVETEKV---------FS------------DMRSRDVVPD------LVCFSSMMS 383
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
+ +G +AL F ++ G+ D ++ C ++ + + + G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIF 386
D+V + +L K + EA K F E+ D+ L +I + G +++A +F
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 387 DTMSSKTL----ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASK 442
M K + +++N++L G K A +I+ M ++ S++ +++A SK
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSW 498
L +V+ + I+ ++ +I S++ YC+ G G + MI D +S+
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 499 NTILMGYATNGYGSEALTLFREMR--CSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTM 556
NT++ G+ S+A L ++M G+ P T+ ++L ++E + M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 557 KHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+NP+ Y+CM++ + L EA + +EM
Sbjct: 684 IER-GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 162/383 (42%), Gaps = 25/383 (6%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFD--------SRVDQCAVLWNSIISGYVLNGEEMEA 281
+D L+ Y A K+REA F +D C N++I V G A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC----NALIGSLVRIGWVELA 219
Query: 282 LALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDA 341
+++ + R GV +V T+ +++A C +E V + + GV DIV + L+ A
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 342 YSKSQGPHEACKFFGEL--KAYD--TILLNTMITVYSNCGRIEDAKWIFDTMSSKTL--- 394
YS EA + + K + NT+I G+ E AK +F M L
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 395 -ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFG 453
++ S+L+ K E +F M D+ D F+S++S L+ F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 454 KAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNG 509
GL D++I T L+ YC+ G + + + + M++ D V++NTIL G
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 510 YGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHY 569
EA LF EM + P + T T ++ G ++ LF MK I ++ Y
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK-RIRLDVVTY 518
Query: 570 SCMVDLYARAGCLGEAIDLIEEM 592
+ ++D + + G + A ++ +M
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADM 541
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 32 LTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLFH 87
+ T N +L +R L +A +LF+EM + ++++ LI+ H G+ ++ LF
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 88 AMPEKT----HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLV----WNTIIHGYSKRG 139
M EK ++N L+ F K GD+ A ++ M K L ++ +++ +G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 140 HPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIEL 196
H +A ++ M ++ P M+ C+ + + G C A + G+ ++I EG
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMI-CN----SMIKGYCRSGNASD-GESFLEKMISEGFVP 618
Query: 197 EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDD---------FSLSALVSGYANAGKM 247
D + ++L+ YG + ++ ++ G+VK++++ F+ ++++ G+ +M
Sbjct: 619 --DCISYNTLI--YGFVRE-ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 248 REA----RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGD 296
+EA R++ + V+ + +I+G+V EA + M + G S D
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 38 LLQFYSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLRLFHAMPEKT 93
L+Q Y R+G + A L +EM Q + ++NT++ E+ +LF+ M E+
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 94 ----HYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKAL 145
Y+ +L+ K G+LQ A LF M K + + +NT++ G+ K G A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 146 SLFKTMSLDPLEMVHCDAGVLATVL---GACADCFALNCGKQVHARVIVEGIELEFDKVL 202
++ M + +L L G A+ F +V +I + I+ ++
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAF------RVWDEMISKNIKPTV--MI 587
Query: 203 CSSLVKFYGKCGDL-DSAARVAGVVKE---VDDFSLSALVSGYANAGKMREARRVFDSRV 258
C+S++K Y + G+ D + + ++ E D S + L+ G+ M +A +
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 259 DQCAVL------WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVST 299
++ L +NSI+ G+ + EA + ++M GV+ D ST
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 156/394 (39%), Gaps = 61/394 (15%)
Query: 232 FSLSALVSGYANAGKMREA--------RRV----------FDSRVDQCAV---LWNSIIS 270
SLSA++ +G++ +A RR DS C +++ +I
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTH 330
YV + EA F +R G + + ++ + + VEL ++ + GV
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 331 DIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIF 386
++ + +++A K + F +++ D + NT+I+ YS+ G +E+A +
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 387 DTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
+ M K G + +++ +VI+ E
Sbjct: 294 NAMPGK----------GFSPGV---------------------YTYNTVINGLCKHGKYE 322
Query: 447 LGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTIL 502
++VF + + GL D SL+ CK G V KVF M + D V +++++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 503 MGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNI 562
+ +G +AL F ++ +G+ P + +T ++ G++ NL + M
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ-GC 441
Query: 563 NPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
++ Y+ ++ + LGEA L EM +A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 136/608 (22%), Positives = 256/608 (42%), Gaps = 81/608 (13%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAFSWNTLIEAH 73
+ + L VS+++T ++SL+ N LL L P + A ++ + A+
Sbjct: 96 DAKSLLVSYIRTS--DASLSLCNSLLH-----------PNLHLSPPPSKAL-FDIALSAY 141
Query: 74 LHSGHRNESLRLFHAMPEKTHYSWNML--------VSAFAKSGDLQLAHSLFDSMPCKNG 125
LH G + +L++F M + N+L + + S + A +FD M K G
Sbjct: 142 LHEGKPHVALQIFQKMI-RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDM-VKIG 199
Query: 126 L-----VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALN 180
+ +N +++GY G AL + + M + V+ D T+L A + L+
Sbjct: 200 VSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE--FKVNPDNVTYNTILKAMSKKGRLS 257
Query: 181 CGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV----DDFSLSA 236
K++ + G L ++V ++LV Y K G L A ++ ++K+ D + +
Sbjct: 258 DLKELLLDMKKNG--LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNI 315
Query: 237 LVSGYANAGKMREARRVFDS----RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHG 292
L++G NAG MRE + D+ ++ V +N++I G G +EA L ++M G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375
Query: 293 VSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEAC 352
V AN ++ SL K + + VT + L+D + S
Sbjct: 376 VK------ANQVTHNISL------KWLCKEEKREAVTRKV---KELVDMHGFSP------ 414
Query: 353 KFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL----ISWNSILVGLAKNA 408
D + +T+I Y G + A + M K + I+ N+IL L K
Sbjct: 415 ---------DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 409 CPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIIST 468
EA ++ + +D+ ++ ++I + +E +++ + V +
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 469 SLVDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYGSEALTLFREMRCS 524
SL+ C G E+ + FD + ++ D+ ++N+I++GY G +A + E
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 525 GVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGE 584
+P T +L+ G+ E+ N F+T+ ++ Y+ M+ + + L E
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT--YNTMISAFCKDKKLKE 643
Query: 585 AIDLIEEM 592
A DL+ EM
Sbjct: 644 AYDLLSEM 651
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 187/438 (42%), Gaps = 33/438 (7%)
Query: 9 GRTLREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAF---- 64
GR L + ++L + K G++ + +T N L+ Y + G L +A Q+ + M QTN
Sbjct: 254 GR-LSDLKELLLDMKKNGLVPNRVT-YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 65 SWNTLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSM 120
++N LI ++G E L L AM + ++N L+ + G A L + M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 121 PCKNGLVWNTIIHGYSKR----GHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADC 176
+G+ N + H S + R+A++ K L + D T++ A
Sbjct: 372 E-NDGVKANQVTHNISLKWLCKEEKREAVTR-KVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 177 FALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKE----VDDF 232
L+ ++ + +GI++ + + ++++ K LD A + + VD+
Sbjct: 430 GDLSGALEMMREMGQKGIKM--NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 233 SLSALVSGYANAGKMREARRVFDS----RVDQCAVLWNSIISGYVLNGEEMEALALFKRM 288
+ L+ G+ K+ +A ++D ++ +NS+I G +G+ A+ F +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 289 RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
G+ D ST +I+ C VE + + + K D + LL+ K
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 349 HEACKFFGEL---KAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL----ISWNSIL 401
+A FF L + DT+ NTMI+ + ++++A + M K L ++NS +
Sbjct: 608 EKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 402 VGLAKNACPSEAIDIFCR 419
L ++ SE ++ +
Sbjct: 668 SLLMEDGKLSETDELLKK 685
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 227/535 (42%), Gaps = 49/535 (9%)
Query: 90 PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKAL 145
P KT + N+L+++ ++ + Q FD + CK + ++ T I+ + K G +A+
Sbjct: 224 PSKT--TCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 146 SLFKTMSLDPLEMVHCDAGVLATVL--GACADCFALNCGKQVHARVIVEGIELEFDKVLC 203
LF M +AGV V+ D + CG+ A + E + ++ +
Sbjct: 281 KLFSKME---------EAGVAPNVVTFNTVIDGLGM-CGRYDEAFMFKEKM---VERGME 327
Query: 204 SSLVKFYGKCGDLDSAARVAG---VVKEVDDFSLSA-------LVSGYANAGKMREARRV 253
+L+ + L A R+ V+KE+ L+ + AG + +A +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 254 FDSRVDQCAVL----WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
D V + L +N++I GY NG+ A L K M G + + + +++ CS
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 310 LLV----VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL 365
L+ + V +M G + S L S+ +F + DT
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 366 LNTMITVYSNCGRIEDA----KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
N ++ G++++A K I +S+N+++ G EA M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
LK D ++++ +I + + +E Q + G+ D + ++D CK E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 482 IGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
G++ FD M ++ + V +N ++ Y +G S AL L +M+ G+ P++ T+T+++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 538 SACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
VEE + LF+ M+ + P + HY+ ++D Y + G + + L+ EM
Sbjct: 688 KGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 121/558 (21%), Positives = 235/558 (42%), Gaps = 105/558 (18%)
Query: 42 YSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLRLFHAMPEK----T 93
+ + G +++A +LF +M + N ++NT+I+ G +E+ M E+ T
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 94 HYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKALSLFK 149
++++LV ++ + A+ + M K N +V+N +I + + G KA+ +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK--------- 200
M L + L + G C + A N R++ E + + F+
Sbjct: 390 LMVSKGLSLTSSTYNTL--IKGYCKNGQADNA-----ERLLKEMLSIGFNVNQGSFTSVI 442
Query: 201 -VLCSSL-----VKFYGKC--------GDLDSAARVAGVVKE------------------ 228
+LCS L ++F G+ G L + ++G+ K
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL-ISGLCKHGKHSKALELWFQFLNKGF 501
Query: 229 -VDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL----WNSIISGYVLNGEEMEALA 283
VD + +AL+ G AGK+ EA R+ + + V+ +N++ISG + EA
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
M + G+ D T + ++ ++ VE Q + G+ D+ S ++D
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 344 KSQGPHEACKFFGELKAYD----TILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
K++ E +FF E+ + + T++ N +I Y GR+ A + + M K
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK------- 674
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
G++ N+ ++ S+I + S +E + +F + G
Sbjct: 675 ---GISPNSA---------------------TYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 460 LEFDHIISTSLVDFYCKCG-FVEIG---RKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
LE + T+L+D Y K G V++ R++ + +++++ ++ GYA +G +EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 516 TLFREMRCSGVRPSAITF 533
L EMR G+ P +IT+
Sbjct: 771 RLLNEMREKGIVPDSITY 788
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 227/535 (42%), Gaps = 49/535 (9%)
Query: 90 PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKAL 145
P KT + N+L+++ ++ + Q FD + CK + ++ T I+ + K G +A+
Sbjct: 224 PSKT--TCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 146 SLFKTMSLDPLEMVHCDAGVLATVL--GACADCFALNCGKQVHARVIVEGIELEFDKVLC 203
LF M +AGV V+ D + CG+ A + E + ++ +
Sbjct: 281 KLFSKME---------EAGVAPNVVTFNTVIDGLGM-CGRYDEAFMFKEKM---VERGME 327
Query: 204 SSLVKFYGKCGDLDSAARVAG---VVKEVDDFSLSA-------LVSGYANAGKMREARRV 253
+L+ + L A R+ V+KE+ L+ + AG + +A +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 254 FDSRVDQCAVL----WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
D V + L +N++I GY NG+ A L K M G + + + +++ CS
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 310 LLV----VELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTIL 365
L+ + V +M G + S L S+ +F + DT
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 366 LNTMITVYSNCGRIEDA----KWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMN 421
N ++ G++++A K I +S+N+++ G EA M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 422 MLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVE 481
LK D ++++ +I + + +E Q + G+ D + ++D CK E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 482 IGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVL 537
G++ FD M ++ + V +N ++ Y +G S AL L +M+ G+ P++ T+T+++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 538 SACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
VEE + LF+ M+ + P + HY+ ++D Y + G + + L+ EM
Sbjct: 688 KGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 121/558 (21%), Positives = 235/558 (42%), Gaps = 105/558 (18%)
Query: 42 YSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLRLFHAMPEK----T 93
+ + G +++A +LF +M + N ++NT+I+ G +E+ M E+ T
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 94 HYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYSKRGHPRKALSLFK 149
++++LV ++ + A+ + M K N +V+N +I + + G KA+ +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 150 TMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK--------- 200
M L + L + G C + A N R++ E + + F+
Sbjct: 390 LMVSKGLSLTSSTYNTL--IKGYCKNGQADNA-----ERLLKEMLSIGFNVNQGSFTSVI 442
Query: 201 -VLCSSL-----VKFYGKC--------GDLDSAARVAGVVKE------------------ 228
+LCS L ++F G+ G L + ++G+ K
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL-ISGLCKHGKHSKALELWFQFLNKGF 501
Query: 229 -VDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVL----WNSIISGYVLNGEEMEALA 283
VD + +AL+ G AGK+ EA R+ + + V+ +N++ISG + EA
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
M + G+ D T + ++ ++ VE Q + G+ D+ S ++D
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 344 KSQGPHEACKFFGELKAYD----TILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
K++ E +FF E+ + + T++ N +I Y GR+ A + + M K
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK------- 674
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
G++ N+ ++ S+I + S +E + +F + G
Sbjct: 675 ---GISPNSA---------------------TYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 460 LEFDHIISTSLVDFYCKCG-FVEIG---RKVFDGMIKTDEVSWNTILMGYATNGYGSEAL 515
LE + T+L+D Y K G V++ R++ + +++++ ++ GYA +G +EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 516 TLFREMRCSGVRPSAITF 533
L EMR G+ P +IT+
Sbjct: 771 RLLNEMREKGIVPDSITY 788
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 125/621 (20%), Positives = 252/621 (40%), Gaps = 93/621 (14%)
Query: 29 NSSLTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNESLR 84
NS+ + + L++ Y R G + D+ ++F M + ++ N ++ + + SG
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 85 LFHAMPEKT----HYSWNMLVSAFAKSGDLQLAHSLFDSMPCKNG-----LVWNTIIHGY 135
M ++ ++N+L++ G + + L M K+G + +NT++H Y
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME-KSGYAPTIVTYNTVLHWY 278
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE 195
K+G + A+ L M ++ C +L +H
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNML------------------IHD-------- 312
Query: 196 LEFDKVLCSS--LVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRV 253
LC S + K Y D+ + ++ + + L++G++N GK+ A ++
Sbjct: 313 ------LCRSNRIAKGYLLLRDMRKR------MIHPNEVTYNTLINGFSNEGKVLIASQL 360
Query: 254 FDSR----VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
+ + V +N++I G++ G EAL +F M G++ + +L C
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTM 369
+L + + + GV + + ++D K+ EA +LLN M
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA-----------VVLLNEM 469
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDK 429
S G D ++++++++ G K A +I CR+ + L +
Sbjct: 470 ----SKDGIDPD------------IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 430 FSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFV----EIGRK 485
++++I C CL+ +++ I G DH LV CK G V E R
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 573
Query: 486 VFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGL 545
+ I + VS++ ++ GY +G G +A ++F EM G P+ T+ ++L G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 546 VEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA---DANMWF 602
+ E ++ H + Y+ ++ ++G L +A+ L EM ++ D+ +
Sbjct: 634 LREAEKFLKSL-HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 603 SVLRGCIAHGNRTIGKMAAEK 623
S++ G G I + A++
Sbjct: 693 SLISGLCRKGKTVIAILFAKE 713
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 122/566 (21%), Positives = 231/566 (40%), Gaps = 88/566 (15%)
Query: 65 SWNTLIEAHLHSGHRNESLRLFHAM------PEKTHYSWNMLVSAFAKSGDLQLAHSL-- 116
++ +I+ +G +E++ L + M P+ YS L++ F K G + A +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS--ALINGFCKVGRFKTAKEIVC 502
Query: 117 --FDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA 174
+ NG++++T+I+ + G ++A+ +++ M L+ H VL T L
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL---- 558
Query: 175 DCFALNCGKQVHARVIVEGIELEFDKVLCSS-----LVKFYGKCGDLDSAARVAGVVKEV 229
C A GK A + + D +L ++ L+ YG G+ A V + +V
Sbjct: 559 -CKA---GKVAEAEEFMRC--MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 230 DD----FSLSALVSGYANAGKMREARRVFDS------RVDQCAVLWNSIISGYVLNGEEM 279
F+ +L+ G G +REA + S VD V++N++++ +G
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD--TVMYNTLLTAMCKSGNLA 670
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGC----SLLVVELVKQMHAHACKIGVTHDIVVA 335
+A++LF M + + D T +++S C +++ + K+ A V + V+
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG---NVLPNKVMY 727
Query: 336 SALLDAYSKSQGPHEACKFFGEL-----KAYDTILLNTMITVYSNCGRIEDAKWIFDTMS 390
+ +D K+ G +A +F E D + N MI YS G+IE + M
Sbjct: 728 TCFVDGMFKA-GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 391 SK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLE 446
++ L ++N +L G +K S + ++ + + + DK + S++ + LE
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 447 LGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYA 506
+G ++ I G+E D L+ C G E++W
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANG----------------EINW-------- 882
Query: 507 TNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEI 566
A L + M G+ T A++S + +E R + M I+PE
Sbjct: 883 -------AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPES 934
Query: 567 EHYSCMVDLYARAGCLGEAIDLIEEM 592
Y +++ R G + A + EEM
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKEEM 960
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 112/559 (20%), Positives = 221/559 (39%), Gaps = 67/559 (11%)
Query: 44 RRGCLDDATQLFDEM----PQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPE----KTHY 95
R GCL +A ++++ M + F++N L+ + +G E+ M
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 96 SWNMLVSAFAKSGDLQLAHSLFDSMPCKNG-----LVWNTIIHGYSKRGHPRKALSLFKT 150
S++ L++ + SG+ A S+FD M K G + +++ G K GH R+A K+
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMT-KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 151 MSLDP----------LEMVHCDAGVLATVLG---------ACADCFALNC--------GK 183
+ P L C +G LA + D + GK
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 184 QVHARVIVEGIELE----FDKVLCSSLVKFYGKCGDLDSA----ARVAGVVKEVDDFSLS 235
V A + + E +KV+ + V K G + ++ + D + +
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 236 ALVSGYANAGKMREARRVFDSRVDQCA----VLWNSIISGYVLNGEEMEALALFKRMRRH 291
A++ GY+ GK+ + + +Q +N ++ GY + + L++ + +
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823
Query: 292 GVSGDVSTVANILSAGCSLLVVEL-VKQMHAHACKIGVTHDIVVASALLD---AYSKSQG 347
G+ D T +++ C ++E+ +K + A C+ GV D + L+ A +
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINW 882
Query: 348 PHEACKFFGELK-AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNSILVGLAK 406
+ K L + D + M++V + R ++++ + MS + + + +GL
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 407 NACPSEAID--IFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDH 464
C I + M+ K+ + A A C + E + ++
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002
Query: 465 IIS--TSLVDFYCKCGFV----EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLF 518
I+ T+L+ CK G V E+ + + +K D VS+N ++ G G + A L+
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Query: 519 REMRCSGVRPSAITFTAVL 537
EM+ G +A T+ A++
Sbjct: 1063 EEMKGDGFLANATTYKALI 1081
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 158/347 (45%), Gaps = 16/347 (4%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVD----QCAVLWNSIISGYVLNGEEMEALA 283
E D ++ +LV+G+ ++ +A + D V+ V +N+II +A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
FK + R G+ +V T +++ C+ ++ + K +T +++ SALLDA+
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 344 KSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLI 395
K+ EA + F E+ D + +++I RI++A +FD M SK ++
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
S+N+++ G K + + +F M+ L + ++ ++I ++ ++ F +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 456 ITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYG 511
G+ D L+ C G +E +F+ M K D V++ T++ G G
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 512 SEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
EA +LF + G++P +T+T ++S GL+ E L+ MK
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 149/317 (47%), Gaps = 13/317 (4%)
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLD 340
AL++ +M + G D T+ ++++ C V + +IG DIV +A++D
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 341 AYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL-- 394
+ K++ ++A FF E++ + + ++ N R DA + M K +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 395 --ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVF 452
I+++++L KN EA ++F M + + D +++S+I+ ++ Q+F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATN 508
++ G D + +L++ +CK VE G K+F M + ++ V++NT++ G+
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 509 GYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEH 568
G +A F +M G+ P T+ +L G +E+ +F+ M+ ++ +I
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVT 437
Query: 569 YSCMVDLYARAGCLGEA 585
Y+ ++ + G + EA
Sbjct: 438 YTTVIRGMCKTGKVEEA 454
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 167/376 (44%), Gaps = 21/376 (5%)
Query: 252 RVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
R F S VD +N ++S V + ++L K+M G+ D+ T +++ C
Sbjct: 80 RPFPSIVD-----FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCF 134
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLN 367
V L + K+G D V +L++ + + +A ++ D + N
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 368 TMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNML 423
+I R+ DA F + K ++++ +++ GL ++ S+A + M
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
+ + ++++++ A + +++F + + + ++ D + +SL++ C ++
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 484 RKVFDGMIK----TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA 539
++FD M+ D VS+NT++ G+ + + LFREM G+ + +T+ ++
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 540 CDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM---PFQA 596
G V++ + F M + I+P+I Y+ ++ G L +A+ + E+M
Sbjct: 375 FFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 597 DANMWFSVLRGCIAHG 612
D + +V+RG G
Sbjct: 434 DIVTYTTVIRGMCKTG 449
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 198/478 (41%), Gaps = 69/478 (14%)
Query: 48 LDDATQLFDEMPQTNAF----SWNTLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNM 99
L+DA LF +M ++ F +N L+ A + + + L M Y++N+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 100 LVSAFAKSGDLQLAHSLFDSM------PCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSL 153
+++ F + LA S+ M P + + ++++G+ +R A+SL M
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEP--DRVTIGSLVNGFCRRNRVSDAVSLVDKM-- 181
Query: 154 DPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKC 213
+G D A N I++ LC + K
Sbjct: 182 --------------VEIGYKPDIVAYN--------AIIDS--------LCKT--KRVNDA 209
Query: 214 GDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCAVLWNSII 269
D G+ V + +ALV+G N+ + +A R+ ++ + +++++
Sbjct: 210 FDFFKEIERKGIRPNV--VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 270 SGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVT 329
+V NG+ +EA LF+ M R + D+ T +++++ C ++ QM G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 330 HDIVVASALLDAYSKSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWI 385
D+V + L++ + K++ + K F E+ +T+ NT+I + G ++ A+
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 386 FDTMS----SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACAS 441
F M S + ++N +L GL N +A+ IF M ++ +D ++ +VI
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF-----DGMIKTD 494
+E +F GL+ D + T+++ C G + ++ +G++K D
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 378 RIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFA 433
++ DA +F M +++ +N +L + K I + +M +L ++ D ++F
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 434 SVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI-- 491
VI+ + L + GK + +G E D + SLV+ +C+ V + D M+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 492 --KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA-CDHTGLVEE 548
K D V++N I+ ++A F+E+ G+RP+ +T+TA+++ C+ + +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 549 GRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEE---MPFQADANMWFSVL 605
R L D +K I P + YS ++D + + G + EA +L EE M D + S++
Sbjct: 245 ARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 606 RGCIAH 611
G H
Sbjct: 303 NGLCLH 308
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTL 69
E Q+ + G L + + + N L+ + + ++D +LF EM Q +N ++NTL
Sbjct: 313 EANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 70 IEAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAHSLFDSMPCK-- 123
I+ +G +++ F M +++N+L+ +G+L+ A +F+ M +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 124 --NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
+ + + T+I G K G +A SLF ++SL L+
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 174/389 (44%), Gaps = 25/389 (6%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQ----CAVLWNSIISGYVLNGEEMEALA 283
E D + S L++G G++ EA + D V+ + N++++G LNG+ +A+
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 284 LFKRMRRHGVSGDVSTVANILSAGC----SLLVVELVKQMHAHACKIGVTHDIVVASALL 339
L RM G + T +L C + L +EL+++M K+ D V S ++
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL----DAVKYSIII 254
Query: 340 DAYSKSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIED-AKWIFDTMSSKT- 393
D K A F E++ D I+ T+I + GR +D AK + D + K
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 394 --LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
++++++++ K EA ++ M + D ++ S+I ++ L+ +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYAT 507
++ G + L++ YCK ++ G ++F M + D V++NT++ G+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE 567
G A LF+EM VRP +++ +L G E+ +F+ ++ + + +I
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELDIG 493
Query: 568 HYSCMVDLYARAGCLGEAIDLIEEMPFQA 596
Y+ ++ A + +A DL +P +
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 202/506 (39%), Gaps = 91/506 (17%)
Query: 59 PQTNAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH----YSWNMLVSAFAKSGDLQLAH 114
P T FS TLI G +E+L L M E H + N LV+ +G + A
Sbjct: 140 PDTVTFS--TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 115 SLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACA 174
L D M + G N + +G P+ V C +G A
Sbjct: 198 LLIDRM-VETGFQPNEVTYG--------------------PVLKVMCKSGQTA------- 229
Query: 175 DCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVK----EVD 230
A+ +++ R +++ D V S ++ K G LD+A + ++ + D
Sbjct: 230 --LAMELLRKMEER------KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 231 DFSLSALVSGYANAGKMREA----RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFK 286
+ L+ G+ AG+ + R + ++ V ++++I +V G+ EA L K
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 287 RMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQ 346
M + G+S D T +++ C ++ M G +I + L++ Y K+
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 347 GPHEACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKT----LISWN 398
+ + F ++ DT+ NT+I + G++E AK +F M S+ ++S+
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 399 SILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITV 458
+L GL N P +A++IF ++ +++D + +I + S ++ +F
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF------ 515
Query: 459 GLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLF 518
C G +K D ++N ++ G G SEA LF
Sbjct: 516 ------------------CSLPLKG-------VKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 519 REMRCSGVRPSAITFTAVLSACDHTG 544
R+M G P+ T+ ++ A H G
Sbjct: 551 RKMEEDGHSPNGCTYNILIRA--HLG 574
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 165/420 (39%), Gaps = 68/420 (16%)
Query: 29 NSSLTTANRLLQFYSRRGCLDDATQLFDEMPQT----NAFSWNTLIEAHLHSGHRNESLR 84
+L T N L+ G + DA L D M +T N ++ +++ SG ++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 85 LFHAMPEKT----HYSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGYS 136
L M E+ +++++ K G L A +LF+ M K + +++ T+I G+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 137 KRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA----LNCGKQVHARVIVE 192
G L + +M+ A DCF L +++H +I
Sbjct: 294 YAGRWDDGAKLLR-------DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 193 GIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARR 252
GI D + ++L+ G+ ++ +A
Sbjct: 347 GIS---------------------------------PDTVTYTSLIDGFCKENQLDKANH 373
Query: 253 VFDSRVDQ-CAV---LWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC 308
+ D V + C +N +I+GY + L LF++M GV D T ++ C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 309 SLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA----YDTI 364
L +E+ K++ V DIV LLD + P +A + F +++ D
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 365 LLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRM 420
+ N +I N +++DA +F ++ K + ++N ++ GL K SEA +F +M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 149/358 (41%), Gaps = 57/358 (15%)
Query: 252 RVFDSRVD-QCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSL 310
RVF S D + V + + +++ +E +A+ LF+ M R + + + S
Sbjct: 26 RVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 311 ----LVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----D 362
LV++L KQM G+ H++ S +++ + + A G++ D
Sbjct: 86 KQYDLVLDLCKQMELK----GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPD 141
Query: 363 TILLNTMITVYSNCGRIEDAKWIFDTM----SSKTLISWNSILVGLAKNACPSEAIDIFC 418
T+ +T+I GR+ +A + D M TLI+ N+++ GL N S+A+ +
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 419 RMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCG 478
RM + G + + + ++ CK G
Sbjct: 202 RM-----------------------------------VETGFQPNEVTYGPVLKVMCKSG 226
Query: 479 ----FVEIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFT 534
+E+ RK+ + IK D V ++ I+ G +G A LF EM G + I +T
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Query: 535 AVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
++ + G ++G L M I P++ +S ++D + + G L EA +L +EM
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 171/378 (45%), Gaps = 29/378 (7%)
Query: 199 DKVLCSSLVKFYGKCGDLDSAARV------AGVVKEVDDFSLSALVSGYANAGKMREARR 252
D + C++L++ + + G AA++ +G V +V + + ++SGY AG++ A
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV--ITYNVMISGYCKAGEINNALS 193
Query: 253 VFDS-RVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
V D V V +N+I+ +G+ +A+ + RM + DV T ++ A C
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 312 VV----ELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DT 363
V +L+ +M C T D+V + L++ K EA KF ++ + +
Sbjct: 254 GVGHAMKLLDEMRDRGC----TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 364 ILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCR 419
I N ++ + GR DA+ + M K +++++N ++ L + AIDI +
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 420 MNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF 479
M + + S+ ++ + ++ + + ++ G D + +++ CK G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 480 VEIGRKVFDGMIKTD----EVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTA 535
VE ++ + + +++NT++ G A G +A+ L EMR ++P IT+++
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 536 VLSACDHTGLVEEGRNLF 553
++ G V+E F
Sbjct: 490 LVGGLSREGKVDEAIKFF 507
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 192/453 (42%), Gaps = 46/453 (10%)
Query: 100 LVSAFAKSGDLQLAHSLFD----SMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
L+ F + G + A + + S + + +N +I GY K G ALS+ MS+ P
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 156 LEMVH-------CDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVK 208
+ + CD+G L + +C + VI I +E C
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC----YPDVITYTILIE---ATCRD--S 253
Query: 209 FYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFD----SRVDQCAVL 264
G L R G +V +++ LV+G G++ EA + + S +
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNV--LVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 265 WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGC--SLL--VVELVKQMH 320
N I+ G M+A L M R G S V T +++ C LL ++++++M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNC 376
H C+ + + + LL + K + A ++ + + D + NTM+T
Sbjct: 372 QHGCQ----PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 377 GRIEDAKWIFDTMSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
G++EDA I + +SSK LI++N+++ GLAK +AI + M DLK D ++
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI- 491
+S++ + + ++ + F + +G+ + + S++ CK + MI
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 492 ---KTDEVSWNTILMGYATNGYGSEALTLFREM 521
K +E S+ ++ G A G EAL L E+
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 14 EGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTL 69
+ +L L+ G + S+ T N L+ F R+G L A + ++MP Q N+ S+N L
Sbjct: 327 DAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 70 IEAHLHSGHRNESLRLFHAMPEKTHY----SWNMLVSAFAKSGDLQLAHSLFDSMPCKNG 125
+ + ++ M + Y ++N +++A K G ++ A + + + K
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 126 ----LVWNTIIHGYSKRGHPRKALSLFKTMSLDPLE 157
+ +NT+I G +K G KA+ L M L+
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 37/335 (11%)
Query: 36 NRLLQFYSRRGCLDDATQLFDEMP----QTNAFSWNTLIEAHLHSGHRNESLRLFHAMPE 91
N L+ + + G + DA ++FDE+ Q S+NTLI + G+ +E RL H M E
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM-E 302
Query: 92 KTH-----YSWNMLVSAFAKSGDLQLAHSLFDSMPCKNGLVWN-----TIIHGYSKRGHP 141
K+ ++++ L++A K + AH LFD M CK GL+ N T+IHG+S+ G
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 142 RKALSLFKTMSLDPLEMVHCDAGVLATVL-GACADCFALNCGKQVHARVIVEGI---ELE 197
++ M L+ D + T++ G C + G V AR IV+G+ L
Sbjct: 362 DLMKESYQKMLSKGLQ---PDIVLYNTLVNGFCKN------GDLVAARNIVDGMIRRGLR 412
Query: 198 FDKVLCSSLVKFYGKCGDLDSAARVAGVVK----EVDDFSLSALVSGYANAGKM----RE 249
DK+ ++L+ + + GD+++A + + E+D SALV G G++ R
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 250 ARRVFDSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCS 309
R + + + V + ++ + G+ L K M+ G V T +L+ C
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 310 LLVVELVKQMHAHACKIGVTHDIVVASALLDAYSK 344
L ++ + IGV D + + LL+ + +
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHR 567
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 168/372 (45%), Gaps = 17/372 (4%)
Query: 261 CAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMH 320
C L ++++ Y G +A+ F+ R+H + N+L L + +
Sbjct: 169 CGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFY 228
Query: 321 AHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYD----TILLNTMITVYSNC 376
G ++ V + L++ + K +A K F E+ + NT+I Y
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 377 GRIEDAKWIFDTM-SSKT---LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSF 432
G +++ + M S+T + ++++++ L K A +F M L + F
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 433 ASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI- 491
++I + ++L ++ + K ++ GL+ D ++ +LV+ +CK G + R + DGMI
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 492 ---KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTA-VLSACDHTGLVE 547
+ D++++ T++ G+ G AL + +EM +G+ + F+A V C +++
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 548 EGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMPFQADANMWFSVLRG 607
R L + ++ I P+ Y+ M+D + + G L++EM Q+D ++ V
Sbjct: 469 AERALREMLRA--GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM--QSDGHVPSVVTYN 524
Query: 608 CIAHGNRTIGKM 619
+ +G +G+M
Sbjct: 525 VLLNGLCKLGQM 536
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 164/399 (41%), Gaps = 48/399 (12%)
Query: 232 FSLSALVSGYANAGKMREARRVFDS----RVDQCAVLWNSIISGYVLNGEEMEALALFKR 287
+ + L++ + G + +A++VFD + V +N++I+GY G E L +
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 288 MRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQG 347
M + DV T + +++A C ++ + CK G+ + V+ + L+ +S++
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN-- 358
Query: 348 PHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL----ISWNSILVG 403
G I+ K + M SK L + +N+++ G
Sbjct: 359 -----------------------------GEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 404 LAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFD 463
KN A +I M L+ DK ++ ++I +E ++ + G+E D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 464 HIISTSLVDFYCKCGFV----EIGRKVFDGMIKTDEVSWNTILMGYATNGYGSEALTLFR 519
+ ++LV CK G V R++ IK D+V++ ++ + G L +
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 520 EMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARA 579
EM+ G PS +T+ +L+ G ++ L D M N + P+ Y+ +++ + R
Sbjct: 510 EMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML-NIGVVPDDITYNTLLEGHHRH 568
Query: 580 GCLGEAIDLIEEMPFQADANMWFSVL----RGCIAHGNR 614
+ E+ AD + S++ R H NR
Sbjct: 569 ANSSKRYIQKPEIGIVADLASYKSIVNELDRASKDHRNR 607
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 148/338 (43%), Gaps = 25/338 (7%)
Query: 95 YSWNMLVSAFAKSGDLQLAHSLFDSMPCKN----GLVWNTIIHGYSKRGHPRKALSLFKT 150
Y +N+L++ F K G++ A +FD + ++ + +NT+I+GY K G+ + L
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 151 MSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFY 210
M D + ++ A ++ + + G L + V+ ++L+ +
Sbjct: 301 ME---KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG--LIPNDVIFTTLIHGH 355
Query: 211 GKCGDLD----SAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQC----A 262
+ G++D S ++ + D + LV+G+ G + AR + D + +
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 263 VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAH 322
+ + ++I G+ G+ AL + K M ++G+ D + ++ C V ++
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 323 ACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA----YDTILLNTMITVYSNCGR 378
+ G+ D V + ++DA+ K K E+++ + N ++ G+
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 379 IEDAKWIFDTMSSKTL----ISWNSILVGLAKNACPSE 412
+++A + D M + + I++N++L G ++A S+
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 34 TANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESLRLFHAM 89
T + L+ + +D A LFDEM + N + TLI H +G + + M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 90 PEKTHYS----WNMLVSAFAKSGDLQLAHSLFDSMPCKNGL-----VWNTIIHGYSKRGH 140
K +N LV+ F K+GDL A ++ D M + GL + T+I G+ + G
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYTTLIDGFCRGGD 430
Query: 141 PRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIELEFDK 200
AL + K M + +E+ G A V G C + ++ + + ++ GI+ D
Sbjct: 431 VETALEIRKEMDQNGIELDR--VGFSALVCGMCKEGRVIDAERALR-EMLRAGIKP--DD 485
Query: 201 VLCSSLVKFYGKCGDLDSAARVA------GVVKEVDDFSLSALVSGYANAGKMREARRVF 254
V + ++ + K GD + ++ G V V + + L++G G+M+ A +
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV--VTYNVLLNGLCKLGQMKNADMLL 543
Query: 255 DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRH--GVSGDVSTVANILS 305
D+ ++ V+ + I +L G A + + +++ G+ D+++ +I++
Sbjct: 544 DAMLN-IGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVN 595
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYAT 507
+ + + G + + L++ +CK G + +KVFD + K VS+NT++ GY
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE 567
G E L +M S RP T++A+++A ++ LFD M + P
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLIPNDV 346
Query: 568 HYSCMVDLYARAGCLGEAIDLIEE-------MPFQADANMWFSVLRGCIAHGNRTIGKMA 620
++ ++ ++R G IDL++E Q D ++ +++ G +G+ +
Sbjct: 347 IFTTLIHGHSRNG----EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 621 AEKIIQ--LDPENPGAYIQLSNVLATSEDWEGSAQVRELMIDKN 662
+ +I+ L P+ Y L + D E + ++R+ M D+N
Sbjct: 403 VDGMIRRGLRPDKI-TYTTLIDGFCRGGDVETALEIRKEM-DQN 444
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/593 (20%), Positives = 250/593 (42%), Gaps = 93/593 (15%)
Query: 48 LDDATQLFDEMPQTNAFS----WNTLIEAHLHSGHRNESLRLFHAMPE----KTHYSWNM 99
LDDA LF EM ++ F ++ L+ A + + L M HY++++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 100 LVSAFAKSGDLQLAHSLFDSMPC----KNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDP 155
L++ F + L LA ++ M N + +++++GY +A++L M +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 156 LEMVHCDAGVLATVLGACADCFALNCGKQVHA---RVIVEGIELEFDKVLCSSLVKFYGK 212
+ L L F N + A R++ +G + D V +V K
Sbjct: 182 YQPNTVTFNTLIHGL------FLHNKASEAMALIDRMVAKGCQP--DLVTYGVVVNGLCK 233
Query: 213 CGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQCAVLWNSIISGY 272
GD D A F+L KM + + ++ +++N+II G
Sbjct: 234 RGDTDLA------------FNL---------LNKMEQGK------LEPGVLIYNTIIDGL 266
Query: 273 VLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDI 332
+AL LFK M G+ +V T ++++S C+ ++ + + + D+
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 333 VVASALLDAYSKSQGPHEACKFFGEL--KAYDT--ILLNTMITVYSNCGRIEDAKWIFDT 388
SAL+DA+ K EA K + E+ ++ D + +++I + R+++AK +F+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 389 MSSK----TLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSC 444
M SK ++++N+++ G K E +++F M+ L + ++ +I
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 445 LELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKTDEVSWNTILMG 504
++ +++F + ++ G + + +++NT+L G
Sbjct: 447 CDMAQEIFKEMVSDG-------------------------------VPPNIMTYNTLLDG 475
Query: 505 YATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINP 564
NG +A+ +F ++ S + P+ T+ ++ G VE+G +LF + + P
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKP 534
Query: 565 EIEHYSCMVDLYARAGCLGEAIDLIEEMPFQA---DANMWFSVLRGCIAHGNR 614
++ Y+ M+ + R G EA L +EM ++ + +++R + G+R
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 64/319 (20%)
Query: 12 LREGRQLHVSFLKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNAF----SWN 67
L E +L+ +K I + S+ T + L+ + LD+A Q+F+ M + F ++N
Sbjct: 342 LVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 68 TLIEAHLHSGHRNESLRLFHAMPEK----THYSWNMLVSAFAKSGDLQLAHSLF-----D 118
TLI+ E + +F M ++ ++N+L+ ++GD +A +F D
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFA 178
+P N + +NT++ G K G KA+ +F+ + +E +
Sbjct: 461 GVP-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME----------------PTIYT 503
Query: 179 LNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGD---LDSAARVAGVVKEVDDFSLS 235
N +++EG +C + GK D L + GV +V + +
Sbjct: 504 YN--------IMIEG--------MCKA-----GKVEDGWDLFCNLSLKGVKPDV--VAYN 540
Query: 236 ALVSGYANAGKMREARRVFDSRVDQCAV----LWNSIISGYVLNGEEMEALALFKRMRRH 291
++SG+ G EA +F + + +N++I + +G+ + L K MR
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 292 GVSGDVST---VANILSAG 307
G +GD ST V N+L G
Sbjct: 601 GFAGDASTIGLVTNMLHDG 619
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 162/341 (47%), Gaps = 14/341 (4%)
Query: 266 NSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACK 325
N +++ + + + A + +M + G D+ T ++++ C +E M +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 326 IGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIED 381
+G+ D+V+ + ++D+ K+ + A F +++ Y D ++ +++ N GR D
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 382 AKWIFDTMSSKTL----ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVIS 437
A + M+ + + I++N+++ K +A +++ M + + + F++ S+I+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 438 ACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKT 493
+ C++ Q+F T G D + TSL++ +CKC V+ K+F M +
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 494 DEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLF 553
+ +++ T++ G+ G + A +F M GV P+ T+ +L + G V++ +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 554 DTMKHNY--NINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
+ M+ + P I Y+ ++ G L +A+ + E+M
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 168/388 (43%), Gaps = 58/388 (14%)
Query: 228 EVDDFSLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSIISGYVLNGEEMEALA 283
E D + ++L++G+ +M EA + + V+ V++ +II NG AL+
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
LF +M +G+ DV ++++ C+ + K + D++ +AL+DA+
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 344 KSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLI 395
K +A + + E+ A + ++I + G +++A+ +F M +K ++
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKA 455
++ S++ G K +A+ IF M+ L + ++ ++I + ++VF
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 456 ITVGLEFDHIISTSLVDFYCKC--GFVEIGRKVFDGMIK--TDEV-----SWNTILMGYA 506
++ G+ + I T V +C C G V+ +F+ M K D V ++N +L G
Sbjct: 379 VSRGVPPN--IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 507 TNGYGSEALTLFREMR-------------------------------CS----GVRPSAI 531
NG +AL +F +MR CS GV+P+ +
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 532 TFTAVLSACDHTGLVEEGRNLFDTMKHN 559
T+T ++S GL E LF MK +
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 214/498 (42%), Gaps = 46/498 (9%)
Query: 65 SWNTLIEAHLHSGHRNESLRLFHAM----PEKTHYSWNMLVSAFAKSGDLQLAHSLFDSM 120
++ ++ LHS NE+L LF M P + + L++ AK + +L D +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 121 PC----KNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAGVLATVLGAC 173
+ N +++ + + P A S M +P D +++
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP------DIVTFTSLING- 151
Query: 174 ADCFALNCGKQVHARVIVEGIEL--EFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEV-- 229
F L + ++ + +E+ + D V+ ++++ K G ++ A + ++
Sbjct: 152 ---FCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI 208
Query: 230 --DDFSLSALVSGYANAGKMREA----RRVFDSRVDQCAVLWNSIISGYVLNGEEMEALA 283
D ++LV+G N+G+ R+A R + ++ + +N++I +V G+ ++A
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE 268
Query: 284 LFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYS 343
L+ M R ++ ++ T ++++ C V+ +QM G D+V ++L++ +
Sbjct: 269 LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC 328
Query: 344 KSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTMSSK----TLI 395
K + +A K F E+ +TI T+I + G+ A+ +F M S+ +
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 396 SWNSILVGLAKNACPSEAIDIFCRMN---MLDLKMDKFSFASVISACASKSCLELGEQVF 452
++N +L L N +A+ IF M M + + +++ ++ LE VF
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 453 GKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATN 508
++ I T ++ CK G V+ +F + +K + V++ T++ G
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Query: 509 GYGSEALTLFREMRCSGV 526
G EA LFR+M+ GV
Sbjct: 509 GLKHEAHVLFRKMKEDGV 526
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 164/392 (41%), Gaps = 37/392 (9%)
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
EAL LF M + +L+ + ++V + H +GV+HD+ + L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 340 DAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTLISWNS 399
+ + +S P+ A F G++ K F+ ++++ S
Sbjct: 115 NCFCQSSQPYLASSFLGKM-----------------------MKLGFEP----DIVTFTS 147
Query: 400 ILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVG 459
++ G EA+ + +M + +K D + ++I + + +F + G
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 460 LEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYATNGYGSEAL 515
+ D ++ TSLV+ C G + GM IK D +++N ++ + G +A
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 516 TLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDL 575
L+ EM + P+ T+T++++ G V+E R +F M+ P++ Y+ +++
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLING 326
Query: 576 YARAGCLGEAIDLIEEMPFQADANMWFSVLRGCIAHGNRTIGK--MAAEKIIQLDPENPG 633
+ + + +A+ + EM + ++ + G +GK +A E +
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGN--TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 634 AYIQLSNVLATSEDWEGSAQVRELMIDKNVQK 665
I+ NVL + G + + LMI +++QK
Sbjct: 385 PNIRTYNVLLHCLCYNGKVK-KALMIFEDMQK 415
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 38/295 (12%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESL 83
+ + T N L+ + + G DA +L++EM + N F++ +LI G +E+
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 84 RLFHAMPEKTHY----SWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWNTIIHGY 135
++F+ M K + ++ L++ F K + A +F M K N + + T+I G+
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATV--LGACADCFALNCGKQVHARVIVEG 193
+ G P A +F M GV + C N GK A +I E
Sbjct: 363 GQVGKPNVAQEVFSHM---------VSRGVPPNIRTYNVLLHCLCYN-GKVKKALMIFED 412
Query: 194 IE-LEFDKV---LCSSLVKFYGKC--GDLDSAARVAGVVK--EVDDFSLSALV--SGYAN 243
++ E D V + + V +G C G L+ A V ++ E+D ++ + G
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 244 AGKMREARRVFDSR----VDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVS 294
AGK++ A +F S V V + ++ISG G + EA LF++M+ GVS
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 134/619 (21%), Positives = 256/619 (41%), Gaps = 71/619 (11%)
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPEKTHY----SWNMLVSAFAKSGDLQLAHSLFD 118
AF+ N L+ + S + + + M E + S + L+ + + A +
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVL- 130
Query: 119 SMPCKNGLVWNTIIHGYSKRGHPR-----KALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
++ K G +N H +G R KA+SL + M + L D TV+
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSL---MPDVFSYNTVIRGF 187
Query: 174 ADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFS 233
C K + ++G + V L+ + K G +D A G +KE+
Sbjct: 188 --CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM---GFLKEMKFMG 242
Query: 234 LSA-------LVSGYANAGKMREARRVFDSRVDQ----CAVLWNSIISGYVLNGEEMEAL 282
L A L+ G+ + G++ + +FD +++ CA+ +N++I G+ G+ EA
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 283 ALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAY 342
+F+ M GV +V T ++ C + + Q+ + + V + +++
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 343 SKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTM---SSKT-- 393
K +A + +K D I N ++ G +++A + M SS T
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 394 -LISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFS----------FASVISACASK 442
+IS+N+++ GL K +A+DI+ DL ++K S + A
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIY------DLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 443 SCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSW 498
+EL +Q+ I + T+++D +CK G + + + + M ++ +
Sbjct: 477 KAMELWKQISDSKIVRNSD----TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 499 NTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKH 558
N +L G +A LF EM+ P ++F ++ G ++ +L M
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 559 NYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM---PFQADANMWFSVLRGCIAHGN-- 613
++P++ YS +++ + + G L EAI ++M F+ DA++ SVL+ CI+ G
Sbjct: 593 -AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 614 --RTIGKMAAEKIIQLDPE 630
+ K +K I LD E
Sbjct: 652 KLTELVKKLVDKDIVLDKE 670
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/519 (20%), Positives = 223/519 (42%), Gaps = 47/519 (9%)
Query: 62 NAFSWNTLIEAHLHSGHRNESLRLFHAMPEKTH----YSWNMLVSAFAKSGDLQLAHSLF 117
N ++ N L++ + +++ L M + +S+N ++ F + +L+ A L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 118 DSMP---CKNGLV-WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGAC 173
+ M C LV W +I + K G +A+ K M LE D V +++
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE---ADLVVYTSLIRGF 257
Query: 174 ADCFALNCGKQVHARVIVEGIELEFDK---VLCSSLVKFYGKCGDLDSAARV------AG 224
DC L+ GK + V+ G D + ++L++ + K G L A+ + G
Sbjct: 258 CDCGELDRGKALFDEVLERG-----DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 225 VVKEVDDFSLSALVSGYANAGKMREARRVFDSRVDQ----CAVLWNSIISGYVLNGEEME 280
V V ++ + L+ G GK +EA ++ + +++ AV +N II+ +G +
Sbjct: 313 VRPNV--YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIG--VTHDIVVASAL 338
A+ + + M++ D T +L C+ ++ ++ K D++ +AL
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 339 LDAYSKSQGPHEACKFFG----ELKAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSKTL 394
+ K H+A + +L A D + N ++ G + A ++ +S +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 395 I----SWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQ 450
+ ++ +++ G K + A + C+M + +L+ F + ++S+ + L+ +
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 451 VFGKAITVGLEFDHIISTS-LVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGY 505
+F + + F ++S + ++D K G ++ + GM + D +++ ++ +
Sbjct: 551 LF-EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 506 ATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTG 544
GY EA++ F +M SG P A +VL C G
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 114/541 (21%), Positives = 223/541 (41%), Gaps = 79/541 (14%)
Query: 5 LQGIGRTLREGRQLHVSFLKTGILNSSLT---TANRLLQFYSRRGCLDDATQLFDEMPQT 61
L+G+ R L G+ VS L+ NS + + N +++ + L+ A +L +EM +
Sbjct: 149 LKGLCRNLECGKA--VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 62 ----NAFSWNTLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLA 113
+ +W LI+A +G +E++ M E + L+ F G+L
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 114 HSLFDSM------PCKNGLVWNTIIHGYSKRGHPRKALSLFKTM---SLDPLEMVHCDAG 164
+LFD + PC + +NT+I G+ K G ++A +F+ M + P V+ G
Sbjct: 267 KALFDEVLERGDSPC--AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP--NVYTYTG 322
Query: 165 VLATVLGACADCFALNC----------GKQVHARVIVEGI---ELEFDKVLCSSLVK--- 208
++ + G AL V +I+ + L D V L+K
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 209 -----------FYGKC--GDLDSAARVAGVV------KEVDDFSLSALVSGYANAGKMRE 249
G C GDLD A+++ ++ + D S +AL+ G ++ +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 250 ARRVFDSRVDQCA----VLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILS 305
A ++D V++ V N +++ + G+ +A+ L+K++ + + T ++
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 306 AGCSLLVVELVKQMHAHACKIGVTH---DIVVASALLDAYSKSQGPHEACKFFGELKA-- 360
C ++ + K + CK+ V+ + + LL + K +A + F E++
Sbjct: 503 GFCKTGMLNVAKGL---LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 361 --YDTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLISWNSILVGLAKNACPSEAI 414
D + N MI G I+ A+ + MS S L +++ ++ K EAI
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 415 DIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
F +M + D SV+ C S+ + ++ K + + D ++ +++D+
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 475 C 475
C
Sbjct: 680 C 680
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 146/359 (40%), Gaps = 16/359 (4%)
Query: 246 KMREARRVFDSRVDQCAVL---WNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVAN 302
+++ A VF VD + L N++++ V + A + +++M + +++
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112
Query: 303 ILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY- 361
+L + + A K G ++ + LL ++ +A E++
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 362 ---DTILLNTMITVYSNCGRIEDAKWIFDTMS----SKTLISWNSILVGLAKNACPSEAI 414
D NT+I + +E A + + M S +L++W ++ K EA+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 415 DIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFY 474
M + L+ D + S+I L+ G+ +F + + G I +L+ +
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 475 CKCGFVEIGRKVFDGMI----KTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSA 530
CK G ++ ++F+ MI + + ++ ++ G G EAL L M P+A
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 531 ITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLI 589
+T+ +++ GLV + + + MK P+ Y+ ++ G L EA L+
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKR-RTRPDNITYNILLGGLCAKGDLDEASKLL 410
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 212/504 (42%), Gaps = 39/504 (7%)
Query: 59 PQTNAFSWNTLIEAHLHSGHRNESLRLFHAMP----EKTHYSWNMLVSAFAKSGDLQLAH 114
P N ++ TLI G + + LF M E +++ L+ + K+G L + H
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 115 SLFDSMPCK----NGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
LF K + +V+++ I Y K G A ++K M + +L +
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL--IK 399
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSA-ARVAGVVK-- 227
G C D + ++ +++ G+E V SSL+ + KCG+L S A ++K
Sbjct: 400 GLCQDG-RIYEAFGMYGQILKRGMEPSI--VTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 228 -EVDDFSLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSIISGYVLNGEEMEAL 282
D LV G + G M A R + Q V++NS+I G+ EAL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 283 ALFKRMRRHGVSGDVSTVANIL------SAGCSLLVVELVKQMHAHACKIGVTHDIVVAS 336
+F+ M +G+ DV+T ++ A C + + Q+ + ++ DI V +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576
Query: 337 ALLDAYSKSQGPHEACKFFGEL----KAYDTILLNTMITVYSNCGRIEDAKWIFDTMSSK 392
++ K +A KFF L D + NTMI Y + R+++A+ IF+ +
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Query: 393 TL----ISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELG 448
++ ++ L KN AI +F M K + ++ ++ + +E
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696
Query: 449 EQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVF----DGMIKTDEVSWNTILMG 504
++F + G+ + + ++D CK G V+ +F D + D V++ ++ G
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Query: 505 YATNGYGSEALTLFREMRCSGVRP 528
Y G EA L+ M +GV+P
Sbjct: 757 YCKVGRLVEAALLYEHMLRNGVKP 780
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 224/520 (43%), Gaps = 56/520 (10%)
Query: 111 QLAHSLFDSMPCKNGLVWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL 170
+L + D P N + + T+I+G+ KRG +A LFK M +E D +T++
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE---PDLIAYSTLI 328
Query: 171 GACADCFALNCGKQVHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARV------AG 224
L G ++ ++ + +G++L D V+ SS + Y K GDL +A+ V G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKL--DVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 225 VVKEVDDFSLSALVSGYANAGKMREA----RRVFDSRVDQCAVLWNSIISGYVLNGEEME 280
+ V +++ L+ G G++ EA ++ ++ V ++S+I G+ G
Sbjct: 387 ISPNVVTYTI--LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 281 ALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQ-MHAHACKIGVTH-------DI 332
AL++ M + G DV + +L G S KQ + HA + V ++
Sbjct: 445 GFALYEDMIKMGYPPDV-VIYGVLVDGLS-------KQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 333 VVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIEDA---------- 382
VV ++L+D + + EA K F + Y T +EDA
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556
Query: 383 KWIFDTMS----SKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKM--DKFSFASVI 436
+FD M S + N ++ L K +A F N+++ KM D ++ ++I
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF--NNLIEGKMEPDIVTYNTMI 614
Query: 437 SACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMI----K 492
S L+ E++F + + T L+ CK ++ ++F M K
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 493 TDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNL 552
+ V++ ++ ++ + + LF EM+ G+ PS ++++ ++ G V+E N+
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 553 FDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEM 592
F + + P++ Y+ ++ Y + G L EA L E M
Sbjct: 735 FHQ-AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 182/452 (40%), Gaps = 79/452 (17%)
Query: 262 AVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHA 321
V + ++I+G+ GE A LFK M + G+ D+ + ++ ++ + ++ +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 322 HACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAYDTILLNTMITVYSNCGRIED 381
A GV D+VV S+ +D Y KS G+L A +++ M+ C I
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKS----------GDL-ATASVVYKRML-----CQGI-- 387
Query: 382 AKWIFDTMSSKTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACAS 441
S ++++ ++ GL ++ EA ++ ++ ++ +++S+I
Sbjct: 388 ---------SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 442 KSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGF----VEIGRKVFDGMIKTDEVS 497
L G ++ I +G D +I LVD K G + K+ I+ + V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 498 WNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSA-------CDHTGLVEEGR 550
+N+++ G+ EAL +FR M G++P TFT V+ C H G
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGL 557
Query: 551 NLFDTMKHN----------------------------YN------INPEIEHYSCMVDLY 576
LFD M+ N +N + P+I Y+ M+ Y
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 577 ARAGCLGEA---IDLIEEMPFQADANMWFSVLRGCIAHGNRTIGKMAAEKIIQLDPENPG 633
L EA +L++ PF + + ++L + N G + I+ P
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNT-VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 634 A--YIQLSNVLATSEDWEGSAQVRELMIDKNV 663
A Y L + + S D EGS ++ E M +K +
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 180/424 (42%), Gaps = 56/424 (13%)
Query: 233 SLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSIISGYVLNGEEMEALALFKRM 288
+L++L++G+ + ++ EA + D V+ V + +++ G + + EA+AL +RM
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 289 RRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGP 348
G D+ T +++ C +L + K + D+V+ + ++D K +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 349 HEACKFFGELKAY---------------------------------------DTILLNTM 369
+A F +++ D + N +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 370 ITVYSNCGRIEDAKWIFDTMSSKT-----LISWNSILVGLAKNACPSEAIDIFCRMNMLD 424
I + G++ +A+ ++D M ++++N+++ G K E +++F M+
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 425 LKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIGR 484
L + ++ ++I + + VF + ++ G+ D + L+D C G VE
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 485 KVFDGM----IKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLSAC 540
VF+ M +K D V++ T++ G + LF + GV+P+ +T+T ++S
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Query: 541 DHTGLVEEGRNLFDTMKHNYNINPEIEHYSCMVDLYARAGCLGEAIDLIEEMP---FQAD 597
GL EE LF MK + + P Y+ ++ R G + +LI+EM F D
Sbjct: 507 CRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 598 ANMW 601
A+ +
Sbjct: 566 ASTF 569
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/552 (21%), Positives = 221/552 (40%), Gaps = 106/552 (19%)
Query: 28 LNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQ----TNAFSWNTLIEAHLHSGHRNESL 83
++ +L T + + ++ RR L A + +M + + + N+L+ H +E++
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 84 RLFHAMPEKTH----YSWNMLVSAFAKSGDLQLAHSLFDSM---PCKNGLV-WNTIIHGY 135
L M E + ++ LV + A +L + M C+ LV + +I+G
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 136 SKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVLGACADCFALNCGKQVHARVIVEGIE 195
KRG P AL+L M +E AD N I++G
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIE----------------ADVVIYN--------TIIDG-- 259
Query: 196 LEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANAGKMREARRVF- 254
LC K DL + G+ +V F+ + L+S N G+ +A R+
Sbjct: 260 ------LCK--YKHMDDAFDLFNKMETKGIKPDV--FTYNPLISCLCNYGRWSDASRLLS 309
Query: 255 ---DSRVDQCAVLWNSIISGYVLNGEEMEALALFKRMRRHGVSGDVSTVANILSAGCSLL 311
+ ++ V +N++I +V G+ +EA L+
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD------------------------- 344
Query: 312 VVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKAY----DTILLN 367
E+VK H D+V + L+ + K + E + F E+ +T+
Sbjct: 345 --EMVKSKHCFP-------DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 368 TMITVYSNCGRIEDAKWIFDTMSS----KTLISWNSILVGLAKNACPSEAIDIFCRMNML 423
T+I + ++A+ +F M S ++++N +L GL N A+ +F M
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 424 DLKMDKFSFASVISACASKSCLELGEQVFGKAITVGLEFDHIISTSLVDFYCKCGFVEIG 483
D+K+D ++ ++I A +E G +F G++ + + T+++ +C+ G E
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 484 RKVF-----DGMIKTDEVSWNTILMGYATNGYGSEALTLFREMRCSGVRPSAITFTAVLS 538
+F DG + + ++NT++ +G + + L +EMR G A TF V
Sbjct: 516 DALFVEMKEDGPL-PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV-- 572
Query: 539 ACDHTGLVEEGR 550
T ++ +GR
Sbjct: 573 ----TNMLHDGR 580
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 145/325 (44%), Gaps = 12/325 (3%)
Query: 280 EALALFKRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALL 339
+A+ LF M + + + +LSA + +LV + +G++H++ S +
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 340 DAYSKSQGPHEACKFFGELKAY----DTILLNTMITVYSNCGRIEDAKWIFDTM----SS 391
+ + + A G++ + LN+++ + + RI +A + D M
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 392 KTLISWNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQV 451
+++ +++ GL ++ SEA+ + RM + + D ++ +VI+ + +L +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 452 FGKAITVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGM----IKTDEVSWNTILMGYAT 507
K +E D +I +++D CK ++ +F+ M IK D ++N ++
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 508 NGYGSEALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIE 567
G S+A L +M + P + F A++ A G + E L+D M + + P++
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 568 HYSCMVDLYARAGCLGEAIDLIEEM 592
Y+ ++ + + + E +++ EM
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREM 382
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 41/315 (13%)
Query: 23 LKTGILNSSLTTANRLLQFYSRRGCLDDATQLFDEMPQTNA----FSWNTLIEAHLHSGH 78
++T + + T N L+ G DA++L +M + N +N LI+A + G
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 79 RNESLRLFHAMPEKTH-----YSWNMLVSAFAKSGDLQLAHSLFDSMPCK----NGLVWN 129
E+ +L+ M + H ++N L+ F K ++ +F M + N + +
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 130 TIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL-GACADCFALNCGKQVHAR 188
T+IHG+ + A +FK M D VH D +L G C N G A
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDG---VHPDIMTYNILLDGLC------NNGNVETAL 446
Query: 189 VIVEGIE---LEFDKVLCSSLVKFYGKCG------DLDSAARVAGVVKEVDDFSLSALVS 239
V+ E ++ ++ D V +++++ K G DL + + GV V + + ++S
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV--VTYTTMMS 504
Query: 240 GYANAGKMREARRVFDSRVDQCAV----LWNSIISGYVLNGEEMEALALFKRMRRHGVSG 295
G+ G EA +F + + +N++I + +G+E + L K MR G +G
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 296 DVST---VANILSAG 307
D ST V N+L G
Sbjct: 565 DASTFGLVTNMLHDG 579
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 208/500 (41%), Gaps = 67/500 (13%)
Query: 127 VWNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLATVL--GACADCFALNCGKQ 184
++N+++H Y G A L K M ++ H V+ +L C D +LNC
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKM----VKCGHMPGYVVYNILIGSICGDKDSLNCD-- 427
Query: 185 VHARVIVEGIELEFDKVLCSSLVKFYGKCGDLDSAARVAGVVKEVDDFSLSALVSGYANA 244
+++ E + ++L AGVV ++ ++S+ +A
Sbjct: 428 -----LLDLAEKAYSEML-------------------AAGVV--LNKINVSSFTRCLCSA 461
Query: 245 GKMREARRVFDSRVDQCAVLWNSIIS---GYVLNGEEME-ALALFKRMRRHGVSGDVSTV 300
GK +A V + Q + S S Y+ N +ME A LF+ M+R G+ DV T
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 301 ANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKSQGPHEACKFFGELKA 360
++ + C ++E ++ ++G T ++V +AL+ AY K++ A + F + +
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 361 Y----DTILLNTMITVYSNCGRIEDAKWIFDTM--------------------SSKTLIS 396
+ + + +I + G++E A IF+ M +++
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
+ ++L G K+ EA + M+M + ++ + ++I L+ ++V +
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIKT----DEVSWNTILMGYATNGYGS 512
G +SL+D Y K ++ KV M++ + V + ++ G G
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
EA L + M G +P+ +T+TA++ G +E L + M + P Y +
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVL 820
Query: 573 VDLYARAGCLGEAIDLIEEM 592
+D + G L A +L+EEM
Sbjct: 821 IDHCCKNGALDVAHNLLEEM 840
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 172/396 (43%), Gaps = 21/396 (5%)
Query: 230 DDFSLSALVSGYANAGKMREARRVFDSRVDQC----AVLWNSIISGYVLNGEEMEALALF 285
D + SAL+S Y G+ A R+FD D C ++ +++ Y G+ +AL LF
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 286 KRMRRHGVSGDVSTVANILSAGCSLLVVELVKQMHAHACKIGVTHDIVVASALLDAYSKS 345
+ M+R G S V T ++ V+ + + G+T D+V + L++ K
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 346 QGPHEACKFFGELKAY----DTILLNTMI-TVYSNCGRIEDAKWIFDTMSSKTL----IS 396
E F E+ + + NT+I ++ + + + FD M + ++ +
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 397 WNSILVGLAKNACPSEAIDIFCRMNMLDLKMDKFSFASVISACASKSCLELGEQVFGKAI 456
++ ++ G K +A+ + M+ ++ S+I+A E ++F +
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 457 TVGLEFDHIISTSLVDFYCKCGFVEIGRKVFDGMIK----TDEVSWNTILMGYATNGYGS 512
+ ++ + KCG + +F+ M D ++N ++ G G +
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 513 EALTLFREMRCSGVRPSAITFTAVLSACDHTGLVEEGRNLFDTMKHNYNINPEIEHYSCM 572
EA +L R+M +G R + +L+ TG+ +F+T+KH+ I P+ Y+ +
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS-GIKPDGVTYNTL 590
Query: 573 VDLYARAGCLGEAIDLIEEMP---FQADANMWFSVL 605
+ +A AG EA ++ EM F+ DA + S+L
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 184/444 (41%), Gaps = 79/444 (17%)
Query: 12 LREGRQLHVSFLKTGILNS-----SLTTANRLLQFYSRRGCLDDATQLFDEMP----QTN 62
++EG+ V + T + N T + L+ Y + G D A +LFDEM Q
Sbjct: 208 MQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPT 267
Query: 63 AFSWNTLIEAHLHSGHRNESLRLFHAMPE----KTHYSWNMLVSAFAKSGDLQLAHSLFD 118
+ TL+ + G ++L LF M T Y++ L+ K+G + A+ +
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK 327
Query: 119 SMPCKNGLV-----WNTIIHGYSKRGHPRKALSLFKTMSLDPLEMVHCDAGVLA--TVLG 171
M ++GL N +++ K G + ++F M M C V++ TV+
Sbjct: 328 DM-LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG-----MWRCTPTVVSYNTVIK 381
Query: 172 ACADCFALNCGKQVHARVIVEGIELEFDKVLCSS----------LVKFYGKCGDLDSAAR 221
A + ++ V + FDK+ S L+ Y K ++ A
Sbjct: 382 ALFE-----------SKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 222 VAGVVKEVDDFSLS-------ALVSGYANAGKMREARRVFDSRVDQ----CAVLWNSIIS 270
+++E+D+ +L++ A + A +F + + ++ +I
Sbjct: 431 ---LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 271 GYVLNGEEMEALALFKRMRRHGVSGDV----STVANILSAGCSLLVVELVKQMHAHACKI 326
+ G+ EA+ LF M+ G DV + ++ ++ AG L+++M + C+
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 327 GV-THDIVVASALLDAYSKSQGPHEACKFFGELK----AYDTILLNTMITVYSNCGRIED 381
+ +H+I+ L+ ++++ P A + F +K D + NT++ +++ G E+
Sbjct: 548 DINSHNII-----LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 382 AKWIFDTMSSKTL----ISWNSIL 401
A + M K I+++SIL
Sbjct: 603 AARMMREMKDKGFEYDAITYSSIL 626