Miyakogusa Predicted Gene
- Lj1g3v0874360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0874360.1 tr|F2EAP6|F2EAP6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,25.1,3e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAM,CUFF.26457.1
(481 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 709 0.0
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 249 3e-66
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 4e-52
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 7e-47
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 180 2e-45
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 5e-44
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 8e-44
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 9e-44
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 3e-43
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 3e-43
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 169 4e-42
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 169 4e-42
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 6e-42
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 6e-42
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 8e-42
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 167 1e-41
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 165 6e-41
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 9e-41
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 4e-40
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 8e-40
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 1e-39
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 4e-39
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 159 4e-39
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 5e-39
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 3e-38
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 4e-38
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 7e-38
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 1e-37
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 154 1e-37
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 2e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 7e-37
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 151 9e-37
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 9e-37
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 1e-36
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 7e-36
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 1e-35
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 3e-35
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 9e-35
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 144 1e-34
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 7e-33
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 138 1e-32
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 137 2e-32
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 3e-31
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 6e-31
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 129 5e-30
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 9e-30
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 121 8e-28
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 116 4e-26
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 114 2e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 114 2e-25
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 114 2e-25
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 113 3e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 112 8e-25
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 111 1e-24
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 110 3e-24
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 101 1e-21
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 100 2e-21
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 93 4e-19
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 93 4e-19
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 92 9e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 91 2e-18
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 91 2e-18
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 90 3e-18
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 90 4e-18
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 82 1e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 79 9e-15
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 79 1e-14
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 75 1e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 74 2e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 74 2e-13
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 74 3e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 69 7e-12
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 69 7e-12
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 68 1e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 68 1e-11
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 68 2e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 68 2e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 67 3e-11
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 66 5e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 66 7e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 9e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 65 1e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 63 4e-10
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 63 5e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 62 7e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 62 1e-09
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 60 4e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 59 5e-09
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 59 6e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 59 1e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 57 2e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 57 3e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 57 4e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 56 5e-08
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 5e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 5e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 5e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 56 6e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 56 6e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 55 8e-08
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 55 9e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 55 1e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 54 2e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 52 8e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 51 2e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G62350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/480 (67%), Positives = 402/480 (83%), Gaps = 1/480 (0%)
Query: 2 IKICNPRKKLLCKFVSFARMLSTGEPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVR 61
I+I N + + CK AR+ S+ E ++VAD+ + + KV+MSSP + LD+AL+Q+G+R
Sbjct: 39 IRIINRQSRFCCKSFLSARLYSSSEQV-RDVADVAKNISKVLMSSPQLVLDSALDQSGLR 97
Query: 62 ASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV 121
S E+VE+VL RF NAG+ +RFF+W+E+QR+Y H+VRAYH+MIES A+IRQY++MWD++
Sbjct: 98 VSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLI 157
Query: 122 TKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
MR K MLNVETFCIVMRKYARA KVDEA+Y FNVM+KY++P NL AFNGLLSALCKS+
Sbjct: 158 NAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSK 217
Query: 182 NVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
NVRKAQE+F++M+ RF PD KTYSILLEGWGK+PNLPKARE FREM+ AGC PD+V+Y I
Sbjct: 218 NVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSI 277
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
MVDILCKAGRVDEA+ +V+ MD + C PT+FIYSVLVHTYG ENR+E+A+D FLEMER G
Sbjct: 278 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 337
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
+KADV V+N+LIGAFCKAN+ KNV RVLKEM+S GVTPNS++CN+I+ LI +G D AF
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 362 EVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
+VFR+MIK+CEPDADTYTM+IKMFCE+ EM+ A K+WK M+ K PS+HTFS LINGLC
Sbjct: 398 DVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKEPLCD 481
+ KACVLLEEMIE GIRPS VTFG+LRQLLIKE+REDVL FL+EK+N+LV EPLCD
Sbjct: 458 EERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEPLCD 517
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 278/445 (62%), Gaps = 3/445 (0%)
Query: 36 TETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYA 95
E +CK++ ++ LN+ V+ SP L+E VLK+ NAG+ A F+WAE Q+ +
Sbjct: 66 AERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFK 125
Query: 96 HTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTF 155
HT Y+ +IESL +I+Q++++W +V M+ K +L+ ETF ++ R+YARA KV EA+ F
Sbjct: 126 HTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAF 185
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKD 214
+ M+++ + FN +L L KSRNV AQ++FD MK RFEPD+K+Y+ILLEGWG++
Sbjct: 186 HKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE 245
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
NL + E REM G PDVV+YGI+++ CKA + +EA+ +M+ NC P+ I+
Sbjct: 246 LNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
L++ G E ++ DA++ F + G + YNAL+GA+C + + ++ + + EM
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMA 394
GV PN+RT ++I+ LI R+ A+EV++ M CEP TY +M++MFC + +DMA
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM--SCEPTVSTYEIMVRMFCNKERLDMA 423
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+KIW +MK K +P +H FS+LI LC +AC EM++ GIRP F +L+Q
Sbjct: 424 IKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQT 483
Query: 455 LIKEKREDVLTFLHEKINLLVKEPL 479
L+ E R+D +T L K++ L K L
Sbjct: 484 LLDEGRKDKVTDLVVKMDRLRKTQL 508
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 239/461 (51%), Gaps = 12/461 (2%)
Query: 20 RMLST--GEPPPQEVADLTETVCKVMMS--SPGVTLDAALNQTGVRASPELVENVLKRFE 75
R+ ST +PP DL + +V+ +P L+ L R S LVE VLKR +
Sbjct: 23 RIFSTLLHDPPS---PDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCK 79
Query: 76 NAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVET- 134
N G A RFF WA R ++AH++ +YH+++E L +Q+ ++WD + + R + +
Sbjct: 80 NLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSK 139
Query: 135 -FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
F IV R Y+RA+ EA FN M ++ + + + LL +LC ++V AQE F
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 194 KG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
KG P KTYSIL+ GW + + AR+ F EM+ C D+++Y ++D LCK+G V
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
D ++ ++M + P ++ +++ +H Y + A M+R + +V +N +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-C 371
I CK K + +L EM G P++ T N I++ +RA ++ RM + C
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC-QNGNAMKAC 430
PD TY M++K+ D A +IW+ M ++F P++ T++ +I+GL + G +AC
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 431 VLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
E MI++GI P T LR L+ + DV+ L K+
Sbjct: 440 RYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 241/426 (56%), Gaps = 7/426 (1%)
Query: 29 PQEVADLTETVCKVM--MSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFE 86
P+EV E VCKV+ + + ++A L++ + S +L+ VL+RF +A AFRFF
Sbjct: 128 PEEV----ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFC 183
Query: 87 WAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAH 146
WA ++ +AH R Y+ M+ LA+ RQ++ M ++ +M KG+L +ETF I M+ +A A
Sbjct: 184 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAK 243
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSI 206
+ +AV F +M KY+ + N LL +L +++ ++AQ +FD +K RF P++ TY++
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTV 303
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
LL GW + NL +A + +M+ G PD+V++ +M++ L ++ + +A+++ M
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
P Y++++ + ++ +E AI+ F +M G++ D VY LI F K V
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMF 385
+LKEM+ G P+ +T N +I + +Q + A ++ +MI+ EP T+ M++K +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+M +W++M K P ++++ LI GL G + +AC LEEM++KG++
Sbjct: 484 FMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPL 543
Query: 446 VTFGKL 451
+ + K
Sbjct: 544 IDYNKF 549
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 37/303 (12%)
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
+N ++S L K+R + + M + ++T++I ++ + KA F M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK 257
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY-GVENRIE 288
V + ++D L +A ++ + +V+ D P Y+VL++ + V N IE
Sbjct: 258 YKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 316
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A + +M +G+K D+V +N ++ ++ K + ++ M+S G PN R+
Sbjct: 317 -AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS----- 370
Query: 349 SSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
YT+MI+ FC+++ M+ A++ + DM P
Sbjct: 371 -----------------------------YTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLH 468
++ LI G LL+EM EKG P T+ L +L+ +K + T ++
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIY 461
Query: 469 EKI 471
K+
Sbjct: 462 NKM 464
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
ER+G D YN+++ K +F+ + VL+EM + G+ T + + + +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 358 DRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+A +F M K + +T ++ R ++ ++ D +RF P++ T++ L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG-KLRQLLIKEKREDVLTFLH 468
+NG C+ N ++A + +MI++G++P V L LL K+ D + H
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH 357
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 98/224 (43%), Gaps = 2/224 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
A+++M+E L R R+ + M++KG NV ++ I++R + + ++ A+ F+ M
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ + A + L++ + + E+ M+ + PD KTY+ L++
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
A + +M+ P + ++ +++ A + V ++M P Y+VL
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ E + +A EM KG+K ++ YN F + +
Sbjct: 515 IRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 239/426 (56%), Gaps = 7/426 (1%)
Query: 29 PQEVADLTETVCKVM--MSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFE 86
P+EV E VCKV+ + + ++A L++ + S +L+ VL+RF +A AFRFF
Sbjct: 128 PEEV----ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFC 183
Query: 87 WAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAH 146
WA ++ +AH R Y+ M+ LA+ RQ++ M ++ +M KG+L +ETF I M+ +A A
Sbjct: 184 WAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAK 243
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSI 206
+ +AV F +M KY+ + N LL +L +++ ++AQ +FD +K RF P++ TY++
Sbjct: 244 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTV 303
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
LL GW + NL +A + +M+ G PD+V++ +M++ L ++ + +A+++ M
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
P Y++++ + ++ +E AI+ F +M G++ D VY LI F K V
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMF 385
+LKEM+ G P+ +T N +I + +Q + ++ +MI+ EP T+ M++K +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+M +W +M K P ++++ LI GL G + +AC LEEM++KG++
Sbjct: 484 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 543
Query: 446 VTFGKL 451
+ + K
Sbjct: 544 IDYNKF 549
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 37/303 (12%)
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
+N ++S L K+R + + M + ++T++I ++ + KA F M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK 257
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY-GVENRIE 288
V + ++D L +A ++ + +V+ D P Y+VL++ + V N IE
Sbjct: 258 YKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 316
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A + +M G+K D+V +N ++ ++ K + ++ M+S G PN R+
Sbjct: 317 -AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS----- 370
Query: 349 SSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
YT+MI+ FC+++ M+ A++ + DM P
Sbjct: 371 -----------------------------YTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLH 468
++ LI G LL+EM EKG P T+ L +L+ +K + T ++
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 461
Query: 469 EKI 471
K+
Sbjct: 462 NKM 464
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
ER+G YN+++ K +F+ + VL+EM + G+ T + + + +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 358 DRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+A +F M K + +T ++ R ++ ++ D +RF P++ T++ L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE-KREDVLTFLH 468
+NG C+ N ++A + +MI+ G++P V + + L++ K+ D + H
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH 357
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
A+++M+E L R + + M++KG NV ++ I++R + + ++ A+ F+ M
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ + A + L++ + + E+ M+ + PD KTY+ L++
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+ +M+ P + ++ +++ A + V +M P Y+VL
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ E + +A EM KG+K ++ YN F + +
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 239/426 (56%), Gaps = 7/426 (1%)
Query: 29 PQEVADLTETVCKVM--MSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFE 86
P+EV E VCKV+ + + ++A L++ + S +L+ VL+RF +A AFRFF
Sbjct: 127 PEEV----ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFC 182
Query: 87 WAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAH 146
WA ++ +AH R Y+ M+ LA+ RQ++ M ++ +M KG+L +ETF I M+ +A A
Sbjct: 183 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAK 242
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSI 206
+ +AV F +M KY+ + N LL +L +++ ++AQ +FD +K RF P++ TY++
Sbjct: 243 ERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTV 302
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
LL GW + NL +A + +M+ G PD+V++ +M++ L ++ + +A+++ M
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
P Y++++ + ++ +E AI+ F +M G++ D VY LI F K V
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMF 385
+LKEM+ G P+ +T N +I + +Q + ++ +MI+ EP T+ M++K +
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+M +W +M K P ++++ LI GL G + +AC LEEM++KG++
Sbjct: 483 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 542
Query: 446 VTFGKL 451
+ + K
Sbjct: 543 IDYNKF 548
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 37/303 (12%)
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
+N ++S L K+R + + M + ++T++I ++ + KA F M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK 256
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY-GVENRIE 288
V + ++D L +A ++ + +V+ D P Y+VL++ + V N IE
Sbjct: 257 YKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 315
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A + +M G+K D+V +N ++ ++ K + ++ M+S G PN R+
Sbjct: 316 -AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS----- 369
Query: 349 SSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
YT+MI+ FC+++ M+ A++ + DM P
Sbjct: 370 -----------------------------YTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 400
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLH 468
++ LI G LL+EM EKG P T+ L +L+ +K + T ++
Sbjct: 401 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 460
Query: 469 EKI 471
K+
Sbjct: 461 NKM 463
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
ER+G D YN+++ K +F+ + VL+EM + G+ T + + + +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 244
Query: 358 DRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+A +F M K + +T ++ R ++ ++ D +RF P++ T++ L
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVL 303
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE-KREDVLTFLH 468
+NG C+ N ++A + +MI+ G++P V + + L++ K+ D + H
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH 356
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 95/224 (42%), Gaps = 2/224 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
A+++M+E L R + + M++KG NV ++ I++R + + ++ A+ F+ M
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ + A + L++ + + E+ M+ + PD KTY+ L++
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+ +M+ P + ++ +++ A + V +M P Y+VL
Sbjct: 454 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ E + +A EM KG+K ++ YN F + +
Sbjct: 514 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 255/481 (53%), Gaps = 23/481 (4%)
Query: 6 NPRKKLLCKFVSFARMLSTG----------------EPPPQEVADLTETVCKVMMS--SP 47
N R L+CK +R+L+ E E A E + +++ + S
Sbjct: 21 NSRIDLICKRFHISRVLNNDFVESTERKNGVGLVCPEKHEDEFAGEVEKIYRILRNHHSR 80
Query: 48 GVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIES 107
L+ ALN++G+ P L+ VL R +AG +RFF WA +Q Y H+ M+
Sbjct: 81 VPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMI 140
Query: 108 LARIRQYQIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQ 165
L+++RQ+ +W ++ +MR N ++ E F ++MR++A A+ V +AV + M KY +
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFR 225
+ F LL ALCK+ +V++A ++F+ M+ +F P+L+ ++ LL GW ++ L +A+E
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY-GVE 284
+M AG PD+V + ++ AG++ +A +++ DM P Y+VL+ E
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
R+++A+ F+EMER G +AD+V Y ALI FCK VL +M GV P+ T
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Query: 345 NVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
I+ + + + + E+ +M + C PD Y ++I++ C+ E+ A+++W +M++
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDV 463
P + TF +ING G ++AC +EM+ +GI S +G L+ LL R+D
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF-SAPQYGTLKSLLNNLVRDDK 499
Query: 464 L 464
L
Sbjct: 500 L 500
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 231/418 (55%), Gaps = 10/418 (2%)
Query: 9 KKLLCKFVSFARMLSTGEPPPQEVADLTETVCKVMMSSPGVTL--DAALNQTGVRA-SPE 65
K+L K + + + +PPP + A + K+++SSP T D L T +P
Sbjct: 2 KRLFSKSLCTSAAGANLKPPPADSA----AIAKLILSSPNTTHQDDQFLLSTKTTPWTPN 57
Query: 66 LVENVLKRFENAGMSAFRFFEWAE-RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM 124
LV +VLKR N G A +FF + + R Y H ++ L I+ AR+ + +W ++ +M
Sbjct: 58 LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 117
Query: 125 RNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
R+ + + +TF IV +YA A K D+AV F M ++ Q+LA+FN +L LCKS+ V
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 184 RKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
KA E+F +++GRF D TY+++L GW PKA E +EMV G +P++ +Y M+
Sbjct: 178 EKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
+AG++ A E +M +C Y+ +VH +GV I+ A + F EM R+G+
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
V YNA+I CK + +N + +EM G PN T NV+I L G R E+
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL 357
Query: 364 FRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
+RM + CEP+ TY MMI+ + E +E++ A+ +++ M S +P+L T++ LI+G+
Sbjct: 358 MQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 37/257 (14%)
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
R P KT++I+ E + KA + F M GC D+ S+ ++D+LCK+ RV++A
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
E+ + + R D V YN ++
Sbjct: 181 YELFRAL------------------------------------RGRFSVDTVTYNVILNG 204
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPD 374
+C + VLKEM G+ PN T N ++ G+ A+E F M K CE D
Sbjct: 205 WCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID 264
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
TYT ++ F E+ A ++ +M + +PS+ T++A+I LC+ N A V+ E
Sbjct: 265 VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE 324
Query: 435 EMIEKGIRPSRVTFGKL 451
EM+ +G P+ T+ L
Sbjct: 325 EMVRRGYEPNVTTYNVL 341
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
+R + Y+ M++ R Q + W+ +M+ + ++V T+ V+ + A ++
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
A F+ M + V ++A +N ++ LCK NV A +F+ M R +EP++ TY++L+
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G + E + M + GC P+ +Y +M+ + V++A+ + + M +C+
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDA 293
P Y++L+ V R ED + A
Sbjct: 403 PNLDTYNILISGMFVRKRSEDMVVA 427
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 17/262 (6%)
Query: 205 SILLEGWGKDPNLPKARETF-------REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
S+L W P KA + F RE V D S+ + +DI +
Sbjct: 61 SVLKRLWNHGP---KALQFFHFLDNHHREYVH-----DASSFDLAIDIAARLHLHPTVWS 112
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
++ M P+ ++++ Y + + A+ FL M G D+ +N ++ C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDAD 376
K+ + + + + + + ++ T NVI++ RT +A EV + M+ + P+
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
TY M+K F ++ A + + +MK + + T++ +++G G +A + +EM
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 437 IEKGIRPSRVTFGKLRQLLIKE 458
I +G+ PS T+ + Q+L K+
Sbjct: 292 IREGVLPSVATYNAMIQVLCKK 313
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 227/408 (55%), Gaps = 4/408 (0%)
Query: 51 LDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLAR 110
L+ ALN++GV P L+E VL R +AG +RFF WA +Q Y H++ Y M++ L++
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 111 IRQYQIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLA 168
+RQ+ +W ++ +MR N ++ E F ++++++A A V +A+ + M K+ +
Sbjct: 160 MRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEY 219
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
F LL ALCK +V+ A ++F+ M+ RF +L+ ++ LL GW + + +A+ +M
Sbjct: 220 VFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMN 279
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
AG PD+V Y ++ AG++ +A ++++DM P + Y+VL+ +R+E
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+A+ F+EMER +ADVV Y AL+ FCK K VL +M G+ P+ T I+
Sbjct: 340 EAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 349 SSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
+ + + E+ +M +I PD Y ++I++ C+ E+ A+++W +M+
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
P + TF +INGL G ++A +EM+ +G+ S +G L+ LL
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF-SVSQYGTLKLLL 506
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 118/222 (53%), Gaps = 4/222 (1%)
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
++V A V +A+EV+ +M P +++ L+ ++DA F +M R
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RM 246
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
++ + +L+ +C+ K + VL +M G P+ ++S + G+ A
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 361 FEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
+++ R M + EP+A+ YT++I+ C+ + M+ AMK++ +M+ + T++AL++G
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
C+ G K ++L++MI+KG+ PS +T+ + ++ EK+E
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTY--MHIMVAHEKKE 406
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 214/396 (54%), Gaps = 10/396 (2%)
Query: 55 LNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQY 114
L + V+ S ELV +L R N +AF FF WA +Q+ Y +VR YH MI L ++R++
Sbjct: 118 LEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKF 177
Query: 115 QIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNG 172
W ++ +MR + ++N +T I++RKY H V +A+ TF+ ++++ + F
Sbjct: 178 DTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQS 237
Query: 173 LLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPK-ARETFREMVSAG 231
LLSALC+ +NV A + K ++ D K+++I+L GW P+ A + EM + G
Sbjct: 238 LLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVG 297
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAI 291
DVVSY M+ K G +++ +++ M P +Y+ +VH + + +A
Sbjct: 298 VKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEAR 357
Query: 292 DAFLEM-ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ M E KGI+ +VV YN+LI CKA K + ++V EM G+ P RT + +
Sbjct: 358 NLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI 417
Query: 351 LISQGRT-DRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
L RT + FE+ +M K+ CEP +TY M+I+ C + D + +W +MK K P
Sbjct: 418 L----RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
L ++ +I+GL NG +A +EM +KG+RP+
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 125/264 (47%), Gaps = 15/264 (5%)
Query: 94 YAHTVRAYHLMIESLARI----RQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKV 148
Y +++++++ + R+ + +W +M N G+ +V ++ ++ Y++ +
Sbjct: 262 YPFDAKSFNIVLNGWCNVIGSPREAERVW---MEMGNVGVKHDVVSYSSMISCYSKGGSL 318
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM---KGRFEPDLKTYS 205
++ + F+ M K + + +N ++ AL K+ V +A+ + +M KG EP++ TY+
Sbjct: 319 NKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKG-IEPNVVTYN 377
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
L++ K +A++ F EM+ G P + +Y + IL + G +E E++ M
Sbjct: 378 SLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKM 434
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
C PT Y +L+ ++ + + EM+ K + D+ Y +I K +
Sbjct: 435 GCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEA 494
Query: 326 RRVLKEMESNGVTPNSRTCNVIIS 349
KEM+ G+ PN ++I S
Sbjct: 495 YGYYKEMKDKGMRPNENVEDMIQS 518
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 114/263 (43%), Gaps = 38/263 (14%)
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDD-NNCMPTSFIYSVLVHTYGVENRIED 289
G V Y M+ IL K + D A ++ +M + + S +++ Y + +
Sbjct: 156 GYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGK 215
Query: 290 AIDAFLEMERKGIKADVVVYNALIGA--------------FCKANKF------------- 322
AI+ F +R ++ + + +L+ A FC +K+
Sbjct: 216 AINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNG 275
Query: 323 --------KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EP 373
+ RV EM + GV + + + +IS G ++ ++F RM K C EP
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV-PSLHTFSALINGLCQNGNAMKACVL 432
D Y ++ + + + A + K M+ ++ + P++ T+++LI LC+ +A +
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 433 LEEMIEKGIRPSRVTFGKLRQLL 455
+EM+EKG+ P+ T+ ++L
Sbjct: 396 FDEMLEKGLFPTIRTYHAFMRIL 418
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 247/451 (54%), Gaps = 19/451 (4%)
Query: 46 SPGVTLDA-ALNQTGV---RASPELVENVLKRFENA--GM---SAFRFFEWAERQRNYAH 96
+P +TL A +L+ + + + SP +V V+++ + G+ + FF WA + +Y H
Sbjct: 89 NPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDH 148
Query: 97 -TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYT 154
+ Y+ MI+ ++RQ+ + W ++ M+++ + +++ETF I++R+Y RA EAV+
Sbjct: 149 KSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKD 214
FN M+ Y + AF+ ++S L + R +AQ FDS+K RFEPD+ Y+ L+ GW +
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRA 268
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+ +A + F+EM AG P+V +Y I++D LC+ G++ A +V DM D+ C P + +
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L+ + R E + + +M++ G + D + YN LI A C+ +N +VL M
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
N+ T N I + + + A ++ +M++ CEP+ TY ++++MF DM
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI-EKGIRPS----RVTF 448
+K+ K+M K P+++T+ L+ C G+ A L +EM+ EK + PS +
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 449 GKLRQLLIKEKREDVLTFLHEKINLLVKEPL 479
+LR+ +K E+++ + +K LV PL
Sbjct: 509 AQLRRAGQLKKHEELVEKMIQK--GLVARPL 537
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 247/465 (53%), Gaps = 13/465 (2%)
Query: 22 LSTGEPPPQEVADLTETVCKVMMSSP-GVTLDAALNQTGVRASPELVENVLKR--FENAG 78
LS + P +E D ETV +++ S V L +L+ +G+ S +L++ VLKR F +
Sbjct: 28 LSDAKVPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGN 87
Query: 79 -MSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV--TKMRNKGMLNVETF 135
+ F+ +A R + H+ + M+ L R R++ +W+++ TK +++ +++ T
Sbjct: 88 PIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTM 147
Query: 136 CIVMRKYARAHKVDEAVYTFNVMDKYEVPQ--NLAAFNGLLSALCKSRNVRKAQEIFDSM 193
+V+ + A+ V + V +F + VP + A FN LL LC+ +++ A+ ++ S+
Sbjct: 148 QVVLGRVAKLCSVRQTVESFWKFKRL-VPDFFDTACFNALLRTLCQEKSMTDARNVYHSL 206
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
K +F+PDL+T++ILL GW + +A F EM G PDVV+Y ++D+ CK ++
Sbjct: 207 KHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIE 263
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
+A +++ M + P Y+ ++ G+ + + A + EM+ G DV YNA I
Sbjct: 264 KAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICE 372
FC A + + +++ EM G++PN+ T N+ L R++E++ RM+ C
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVL 432
P+ + +IKMF ++DMAM++W+DM K F L++ LC +A
Sbjct: 384 PNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKC 443
Query: 433 LEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKE 477
L EM+EKG RPS V+F +++ L+ + D + L +K+ + E
Sbjct: 444 LLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMAIFSTE 488
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 209/407 (51%), Gaps = 11/407 (2%)
Query: 51 LDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLAR 110
++ AL+++ V + +V +L+R + +AFRFF WA Q +Y+H AY+ MI+ L+
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 171
Query: 111 IR----QYQIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVP 164
+ Q++I+ D++ M+ NK ++ V+ ++RKY + + + +
Sbjct: 172 TKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQ 231
Query: 165 QNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETF 224
+ AFN LL ALCK V++ + + M+ R +PD T+++L GW + + KA +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN---CMPTSFIYSVLVHTY 281
EM+ AG P+ +Y +D C+AG VDEA ++ M PT+ +++++
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVAL 351
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
++ E+ + M G DV Y +I C A K + L EM + G P+
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T N + L +TD A +++ RM++ C P TY M+I MF E ++ D A W +
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE 471
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR-PSRV 446
M + V + T+ A+INGL A +AC LLEE++ KG++ P RV
Sbjct: 472 MDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRV 518
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 5/231 (2%)
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
R+ + P++ ++ +++D LCK G V E +++ M + P + ++VL +
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRV 281
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT---PNS 341
+ A+ EM G K + Y A I FC+A + M + G P +
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTA 341
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+T ++I +L + + FE+ RMI C PD TY +I+ C ++D A K +
Sbjct: 342 KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
M +K + P + T++ + LC+N +A L M+E PS T+ L
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 14/246 (5%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVM----DKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
T+C + + +A VDEA F+ M P F ++ AL K+ KA+E
Sbjct: 305 TYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP-TAKTFALMIVALAKND---KAEEC 360
Query: 190 FDSMKGRF-----EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
F+ + GR PD+ TY ++EG + +A + EM + G PD+V+Y +
Sbjct: 361 FE-LIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLR 419
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
+LC+ + DEA+++ M ++ C P+ Y++L+ + + + A + + EM+++
Sbjct: 420 VLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQ 479
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
DV Y A+I ++ K +L+E+ + G+ R + + L G +V
Sbjct: 480 DVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVS 539
Query: 365 RRMIKI 370
M K
Sbjct: 540 EHMKKF 545
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 37/236 (15%)
Query: 221 RETFREMVSAG----CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ FR AG S + ++Y M+DIL ++ +V DM D
Sbjct: 140 KTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLD------------ 187
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
N+ +D LE+ RK + Y + F K + RV + E N
Sbjct: 188 ---YMKRNNKTVVLVDVLLEILRKYCER----YLTHVQKFAKRKRI----RVKTQPEINA 236
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMK 396
N+++ +L G + RRM +PDA+T+ ++ +C + AMK
Sbjct: 237 F-------NMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG---IRPSRVTFG 449
+ ++M P T+ A I+ CQ G +A L + MI KG P+ TF
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 239/463 (51%), Gaps = 24/463 (5%)
Query: 7 PRKKLLCKFVSFARMLSTGEPPPQEVADLTE--TVCKVMMSS---PGVTLDAALNQTGVR 61
P + L+ + S A ST PP Q T+ T+ ++ ++ PG +L++AL++TG+
Sbjct: 39 PVEPLIQRIQSPAVPDSTCTPPQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIE 98
Query: 62 ASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV 121
S ELV + R ++ M F+WAE + + + + ++ SL + R+++I W +V
Sbjct: 99 PSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLV 158
Query: 122 -TKMRN---KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE----VPQNLAAFNGL 173
++R+ +++ +TF +++R+YARA V +A+ F YE L L
Sbjct: 159 FDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVL 218
Query: 174 LSALCKSRNVRKA----QEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
L ALCK +VR+A + I +M + P ++ ++ILL GW + L +A + + EM +
Sbjct: 219 LDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKA 278
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
P VV+YG +++ C+ RV A+EV+++M +++ ++ G R+ +
Sbjct: 279 MNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSE 338
Query: 290 AIDAFLEMERKGI---KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
A+ MER + +V YN+L+ FCKA ++LK M + GV P + T N
Sbjct: 339 ALGM---MERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 347 IISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+T+ ++ ++I+ PD TY +++KM CE ++ +AM++ K+MK++
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG 455
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
P L T + LI+ LC+ +A + + +GI P +TF
Sbjct: 456 IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 147/306 (48%), Gaps = 14/306 (4%)
Query: 168 AAFNGLLSALCKSRNVRKAQE-IFDSMKGRFEPDL---KTYSILLEGWGKDPNLPKARET 223
+ F+ ++++LCK+R A +FD ++ +L T+ +L+ + + + +A
Sbjct: 136 SLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRA 195
Query: 224 FREMVS----AGCSPDVVSYGIMVDILCKAGRVDEA---VEVVKDMDDNNCMPTSFIYSV 276
F S + ++ +++D LCK G V EA +E + D+N +P+ I+++
Sbjct: 196 FEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L++ + +++ A + EM+ +K VV Y LI +C+ + + VL+EM+
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE--PDADTYTMMIKMFCERNEMDMA 394
+ N N II L GR A + R +CE P TY ++K FC+ ++ A
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFF-VCESGPTIVTYNSLVKNFCKAGDLPGA 374
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
KI K M ++ P+ T++ ++ + L ++IE G P R+T+ + ++
Sbjct: 375 SKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 455 LIKEKR 460
L ++ +
Sbjct: 435 LCEDGK 440
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 206/401 (51%), Gaps = 8/401 (1%)
Query: 55 LNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQY 114
L++ V + LV VL+RF N A+ FF WA Q Y H+ Y+ M++ L + R +
Sbjct: 123 LSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNF 182
Query: 115 QIMWDIVTKM---RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDK-YEVPQNLAAF 170
+MW++V +M ++ ++T VMR+ A++ K ++AV F M+K Y V + A
Sbjct: 183 DLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAM 242
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
N L+ AL K ++ A E+F + +PD +T++IL+ G+ K AR M
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
+PDVV+Y V+ CK G E++++M +N C P Y++++H+ G ++ +A
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ + +M+ G D Y++LI K +FK+ + ++M + GV + N +IS+
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Query: 351 LISQGRTDRAFEVFRRMI----KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRF 406
+ R + A + +RM + C P+ +TY ++KM C + +M + + M
Sbjct: 423 ALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDV 482
Query: 407 VPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ T+ LI GLC +G +AC+ EE + KG+ P T
Sbjct: 483 SIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST 523
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 206/393 (52%), Gaps = 8/393 (2%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVM 139
F+F E N + L I R+ + + I+ + G + +V T+ +++
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTL-IRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FE 198
Y +A +++ A+ +V+D+ V ++ +N +L +LC S +++A E+ D M R
Sbjct: 180 SGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
PD+ TY+IL+E +D + A + EM GC+PDVV+Y ++V+ +CK GR+DEA++
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+ DM + C P +++++ + R DA +M RKG VV +N LI C+
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADT 377
+L++M +G PNS + N ++ + + DRA E RM+ + C PD T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
Y M+ C+ +++ A++I + SK P L T++ +I+GL + G KA LL+EM
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 438 EKGIRPSRVTFGKLRQLLIKE-KREDVLTFLHE 469
K ++P +T+ L L +E K ++ + F HE
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 197/413 (47%), Gaps = 40/413 (9%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNV 157
V Y++MI + + ++ +M +V T+ ++R + K+ +A+ +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPN 216
M + + ++ + L+ A C+ V A ++ D M+ R PD+ TY++L+ G K+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 217 LPKARETFREMVSAGC-----------------------------------SPDVVSYGI 241
L +A + +M S+GC SP VV++ I
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
+++ LC+ G + A+++++ M + C P S Y+ L+H + E +++ AI+ M +G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
D+V YN ++ A CK K ++ +L ++ S G +P T N +I L G+T +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 362 EVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
++ M K +PD TY+ ++ ++D A+K + + + P+ TF++++ GL
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK-REDVLTFLHEKIN 472
C++ +A L MI +G +P+ ++ L + L E ++ L L+E N
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 160/352 (45%), Gaps = 38/352 (10%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
QR+ V Y ++IE+ R ++ +MR++G +V T+ +++ + ++D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSIL- 207
EA+ N M N+ N +L ++C + A+++ D ++ F P + T++IL
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 208 ----------------------------------LEGWGKDPNLPKARETFREMVSAGCS 233
L G+ K+ + +A E MVS GC
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
PD+V+Y M+ LCK G+V++AVE++ + C P Y+ ++ + AI
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
EM K +K D + Y++L+G + K + E E G+ PN+ T N I+ L
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 354 QGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+TDRA + MI + C+P+ +YT++I+ A+++ ++ +K
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
+ + G ++E + +++M + +P + L+ + + A +E G D
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
V+ YN +I +CKA + N VL M V+P+ T N I+ SL G+ +A EV
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 366 RMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
RM+ + C PD TYT++I+ C + + AMK+ +M+ + P + T++ L+NG+C+ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 425 NAMKACVLLEEMIEKGIRPSRVT 447
+A L +M G +P+ +T
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVIT 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y+ ++ + ++ + + +M ++G ++ T+ ++ + KV++AV N +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
L +N ++ L K+ KA ++ D M+ + +PD TYS L+ G ++ +
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A + F E G P+ V++ ++ LCK+ + D A++ + M + C P Y++L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 278 VHTYGVENRIEDAIDAFLEMERKGI 302
+ E ++A++ E+ KG+
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGL 585
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 232/438 (52%), Gaps = 10/438 (2%)
Query: 30 QEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAE 89
Q D+ + SSP + L++ G+ + ELV V+ R + A+ +
Sbjct: 76 QSALDVHNIIKHHRGSSPE-KIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVV 134
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNK-GMLNVETFCIVMRKYARAHKV 148
+Q + + Y+ +++ L ++R+++ + +M + G +N +T+ +++ +YA AHKV
Sbjct: 135 KQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKV 194
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILL 208
DEAV F ++ + +L AF+GLL LC+ ++V A+ +F S + F D+K +++L
Sbjct: 195 DEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMIL 254
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
GW N+ +A+ +++++++ C PDVVSYG M++ L K G++ +A+E+ + M D
Sbjct: 255 NGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRN 314
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P I + ++ + RI +A++ F E+ KG +VV YN+L+ CK + + V +
Sbjct: 315 PDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWEL 374
Query: 329 LKEMESNG--VTPNSRTCNVIISSLISQGRTDRAFE-VFRRMIK-ICEPDADTYTMMIKM 384
++EME G +PN +V S L+ + + + V RM K CE +D Y +M ++
Sbjct: 375 VEEMELKGGSCSPN----DVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRL 430
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+ + ++ + +IW +M+ P T++ I+GL G +A +EM+ KG+ P
Sbjct: 431 YVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Query: 445 RVTFGKLRQLLIKEKRED 462
T L Q K + ED
Sbjct: 491 PRTEMLLNQNKTKPRVED 508
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 6/238 (2%)
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
Y ++D+L K R +E +V +M + Y VL++ Y +++++A+ F +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVR--RVLKEMESNGVTPNSRTCNVIISSLISQGR 356
GI D+V ++ L+ C+ +K+V L + + N+I++ G
Sbjct: 206 EFGIDDDLVAFHGLLMWLCR---YKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGN 262
Query: 357 TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
A ++ +I C PD +Y MI ++ ++ AM++++ M R P + +
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINL 473
+I+ LC +A + E+ EKG P+ VT+ L + L K +R + + L E++ L
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 219/458 (47%), Gaps = 16/458 (3%)
Query: 6 NPRKKLLCKFVSFARMLSTGEPPPQEVAD---LTETVCKVMMSSPGV--TLDAALNQTG- 59
NP + F +F + LST E D +E + V++ G + D +
Sbjct: 17 NPSSSSIAIFSTFIKNLSTASEQLPETLDEYSQSEEIWNVIVGRDGDRDSEDDVFKRLSS 76
Query: 60 ------VRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQ 113
V S LV +L RF + SA +WAE + + H+ AY + ++ L + ++
Sbjct: 77 DEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKK 136
Query: 114 YQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGL 173
+ M + V +MR ++ + T +MR++A A + +EAV F+ + ++ + +N + N L
Sbjct: 137 WDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLL 196
Query: 174 LSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
L LCK + V +A+ + +K P+ T++I + GW K + +A T +EM G
Sbjct: 197 LDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFR 256
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
P V+SY ++ C+ + E++ +M+ N P S Y+ ++ + + E+A+
Sbjct: 257 PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRV 316
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK-EMESNGVTPNSRTCNVIISSLI 352
M+R G K D + YN LI +A + + RV + EM GV+ N+ T N +I+
Sbjct: 317 ATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 353 SQGRTDRAFEVFRRM--IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP-S 409
D+A E+ + M +C PD TY +++ +R ++ K+ K+M +K +
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLD 436
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
T++ LI LC+ A L EEMI + I P T
Sbjct: 437 ESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 219/458 (47%), Gaps = 16/458 (3%)
Query: 6 NPRKKLLCKFVSFARMLSTGEPPPQEVAD---LTETVCKVMMSSPGV--TLDAALNQTG- 59
NP + F +F + LST E D +E + V++ G + D +
Sbjct: 17 NPSSSSIAIFSTFIKNLSTASEQLPETLDEYSQSEEIWNVIVGRDGDRDSEDDVFKRLSS 76
Query: 60 ------VRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQ 113
V S LV +L RF + SA +WAE + + H+ AY + ++ L + ++
Sbjct: 77 DEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKK 136
Query: 114 YQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGL 173
+ M + V +MR ++ + T +MR++A A + +EAV F+ + ++ + +N + N L
Sbjct: 137 WDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLL 196
Query: 174 LSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
L LCK + V +A+ + +K P+ T++I + GW K + +A T +EM G
Sbjct: 197 LDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFR 256
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
P V+SY ++ C+ + E++ +M+ N P S Y+ ++ + + E+A+
Sbjct: 257 PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRV 316
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK-EMESNGVTPNSRTCNVIISSLI 352
M+R G K D + YN LI +A + + RV + EM GV+ N+ T N +I+
Sbjct: 317 ATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 353 SQGRTDRAFEVFRRM--IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP-S 409
D+A E+ + M +C PD TY +++ +R ++ K+ K+M +K +
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLD 436
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
T++ LI LC+ A L EEMI + I P T
Sbjct: 437 ESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 193/379 (50%), Gaps = 11/379 (2%)
Query: 74 FENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM--RNKGMLN 131
+ N A FF W ER+ + HT ++ +I+ L + +++I W ++ +M + + N
Sbjct: 57 YSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPN 116
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
TF IV ++Y AH V EA+ ++ +D + + ++ +F L+ ALC+ ++V +A+E+
Sbjct: 117 HVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFYNLVDALCEHKHVVEAEELCF 175
Query: 192 SMK----GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC 247
G + K ++++L GW K K +E +++M + G + D+ SY I +DI+C
Sbjct: 176 GKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 248 KAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
K+G+ +AV++ K+M Y+ ++ G +E I F EM +G + +V
Sbjct: 236 KSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 295
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+N +I C+ + ++ R+L EM G P+S T + S L + +F RM
Sbjct: 296 THNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRM 352
Query: 368 IKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
I+ P DTY M+++ F + + +WK MK P ++A+I+ L Q G
Sbjct: 353 IRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGML 412
Query: 427 MKACVLLEEMIEKGIRPSR 445
A EEMIE+G+ P R
Sbjct: 413 DMAREYEEEMIERGLSPRR 431
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N + +++R +++ + + MD V ++L +++ + +CKS KA +++
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
MK R + D+ Y+ ++ G + FREM GC P+V ++ ++ +LC+
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIY----------SVLVHTYG--VENRIEDAIDAFLEM 297
GR+ +A ++ +M C P S Y S ++ +G + + + +D ++ +
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 298 ERK--------------------GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
RK G D YNA+I A + R +EM G+
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Query: 338 TPNSR 342
+P R
Sbjct: 428 SPRRR 432
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 141/310 (45%), Gaps = 28/310 (9%)
Query: 178 CKSRNVRKAQEIFDSMK--GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS-P 234
C S + +KA E F+ ++ F +T++ +++ GK + M+ S P
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL----VHTYGVE------ 284
+ V++ I+ A V EA++ +DD N + Y+++ H + VE
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCF 175
Query: 285 --NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
N I + ++ ++N ++ + K + + K+M++ GVT +
Sbjct: 176 GKNVIGNGFSV----------SNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLF 225
Query: 343 TCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
+ ++ + + G+ +A ++++ M + + D Y +I+ ++ ++++++M
Sbjct: 226 SYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREM 285
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
+ + P++ T + +I LC++G A +L+EM ++G +P +T+ L L EK
Sbjct: 286 RERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL--EKPS 343
Query: 462 DVLTFLHEKI 471
++L+ I
Sbjct: 344 EILSLFGRMI 353
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 210/424 (49%), Gaps = 2/424 (0%)
Query: 50 TLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLA 109
+ +L+ G+ S ++V +VL R +G + FF+WA R+ V +Y +++ +L
Sbjct: 103 AIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALG 162
Query: 110 RIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLA 168
R + + M D++ M +G+ ++E I M + R H V A+ F + + V +
Sbjct: 163 RRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE 222
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
+FN LL LC+ +V A+ +F++ KG D +Y+I++ GW K + + + +EMV
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
+G PD +SY +++ L + GR++++VE+ ++ +P + +Y+ ++ + +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+++ + M + + ++ Y+ L+ K K + + +EM S GV P + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 349 SSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
L S G A ++++ K C Y +++K + M + +W +M+ +
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFL 467
+ + +++GLC G+ A +++EE + KG P+R + +L L+ + ++ L
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Query: 468 HEKI 471
KI
Sbjct: 523 FLKI 526
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF-NV 157
+Y++MI +++ + + M ++ +M G + ++ ++ R +++++V F N+
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPN 216
K VP + +N ++ +R+ ++ + M EP+L+TYS L+ G K
Sbjct: 317 KHKGNVP-DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK 375
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ A E F EM+S G P + LC G A+ + + C + Y +
Sbjct: 376 VSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKL 435
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+ + ++ + EM+ G +DV VY ++ C +N V++E G
Sbjct: 436 LLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
PN + + S L++ +T+ A+++F ++ K
Sbjct: 496 FCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 2/246 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y +IE L R + +I +++KG + + + ++ + A DE++ + M
Sbjct: 292 SYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRM 351
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
E NL ++ L+S L K R V A EIF+ M R P + L+
Sbjct: 352 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPP 411
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
A +++ AGC +Y +++ L + G+ + V +M ++ +Y +
Sbjct: 412 HAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYI 471
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
V + +E+A+ E RKG + VY+ L +NK + ++ +++
Sbjct: 472 VDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARA 531
Query: 338 TPNSRT 343
T N+R+
Sbjct: 532 TENARS 537
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 206/417 (49%), Gaps = 25/417 (5%)
Query: 55 LNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQY 114
L+ +PE N+L + +N +F WA + + T+R + + L + + Y
Sbjct: 39 LHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRCKCITLHILTKFKLY 96
Query: 115 ---QIMW-DIVTKMRN--------KGMLNVETFC--------IVMRKYARAHKVDEAVYT 154
QI+ D+ K + K + C +V++ Y+R +D+A+
Sbjct: 97 KTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSI 156
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKS-RNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWG 212
++ + + ++N +L A +S RN+ A+ +F M + + P++ TY+IL+ G+
Sbjct: 157 VHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC 216
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
N+ A F +M + GC P+VV+Y ++D CK ++D+ ++++ M P
Sbjct: 217 FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
Y+V+++ E R+++ EM R+G D V YN LI +CK F + EM
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEM 391
+G+TP+ T +I S+ G +RA E +M ++ P+ TYT ++ F ++ M
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ A ++ ++M F PS+ T++ALING C G A +LE+M EKG+ P V++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 194/405 (47%), Gaps = 5/405 (1%)
Query: 59 GVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMW 118
GV + +++ ++ N + F E E Q + V Y+++I +
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQ--VSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 119 DIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
+ KM KG L NV T+ ++ Y + K+D+ M + NL ++N +++ L
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 178 CKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
C+ +++ + M R + D TY+ L++G+ K+ N +A EM+ G +P V
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
++Y ++ +CKAG ++ A+E + M P Y+ LV + + + +A E
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M G VV YNALI C K ++ VL++M+ G++P+ + + ++S
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 357 TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
D A V R M+ K +PD TY+ +I+ FCE+ A ++++M P T++A
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
LIN C G+ KA L EM+EKG+ P VT+ L L K+ R
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 195/414 (47%), Gaps = 53/414 (12%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y+++I L R + + + ++T+M +G L+ T+ +++ Y + +A+ M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
++ + ++ + L+ ++CK+ N+ +A E D M+ R P+ +TY+ L++G+ + +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A REM G SP VV+Y +++ C G++++A+ V++DM + P YS +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ + +++A+ EM KGIK D + Y++LI FC+ + K + +EM G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMI-------------- 382
P+ T +I++ +G ++A ++ M+ K PD TY+++I
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 383 ------------------------------------KMFCERNEMDMAMKIWKDMKSKRF 406
K FC + M A ++++ M K
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 407 VPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
P ++ +I+G C+ G+ KA L +EM++ G VT L + L KE +
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 155/334 (46%), Gaps = 18/334 (5%)
Query: 94 YAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAV 152
++ +V Y+ +I + + ++ M+ KG+ +V ++ V+ + R++ VDEA+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 153 YTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGW 211
M + + + ++ L+ C+ R ++A ++++ M + PD TY+ L+ +
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 212 GKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
+ +L KA + EMV G PDVV+Y ++++ L K R EA ++ + +P+
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 272 FIYSVLVHT---------------YGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
Y L+ + ++ + +A F M K K D YN +I
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDA 375
C+A + + KEM +G ++ T ++ +L +G+ + V +++ CE +A
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEA 710
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
+ +++++ MD+ + + +M F+P+
Sbjct: 711 EQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT-DRAFEVFRR 366
V++ ++ ++ + + ++ +++G P + N ++ + I R A VF+
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 367 MIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
M++ P+ TY ++I+ FC +D+A+ ++ M++K +P++ T++ LI+G C+
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKIN 472
LL M KG+ P+ +++ + L +E R ++F+ ++N
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 190/360 (52%), Gaps = 3/360 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
TV + + ++A+ +QY ++ + +M KG+ N+ T I++ + R K+ A
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
+ K N F+ L++ LC V +A E+ D M + +PDL T + L+ G
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A +MV GC P+ V+YG +++++CK+G+ A+E+++ M++ N + Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
S+++ +++A + F EME KGI +++ YN LIG FC A ++ + ++L++M
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDM 393
+ PN T +V+I S + +G+ A E+ + MI + PD TYT +I FC+ N +D
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A ++ M SK P++ TF+ LING C+ L +M +G+ VT+ L Q
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 184/355 (51%), Gaps = 3/355 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y ++ + + Q + +++ KM + + L+ + I++ + +D A FN M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 159 DKYEVPQNLAAFNGLLSALCKS-RNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNL 217
+ + N+ +N L+ C + R A+ + D +K + P++ T+S+L++ + K+ L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A E +EM+ G +PD ++Y ++D CK +D+A ++V M C P +++L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
++ Y NRI+D ++ F +M +G+ AD V YN LI FC+ K + + +EM S V
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
PN T +++ L G +++A E+F ++ K E D Y ++I C +++D A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + K P + T++ +I GLC+ G +A +L +M E G P T+ L
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 188/395 (47%), Gaps = 14/395 (3%)
Query: 84 FFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYA 143
F +++R +Y +R+ + I++ I ++ M + ++ + V F + A
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDM------IHSRPLPTVIDFSRLFSAIA 99
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM----KGRFEP 199
+ + D + M+ + NL + +++ C+ R + A F +M K +EP
Sbjct: 100 KTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA---FSAMGKIIKLGYEP 156
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
+ T+S L+ G + + +A E MV G PD+++ +V+ LC +G+ EA+ ++
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
M + C P + Y +++ + A++ +ME + IK D V Y+ +I CK
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTY 378
N + EME G+T N T N++I + GR D ++ R MIK P+ T+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
+++I F + ++ A ++ K+M + P T+++LI+G C+ + KA +++ M+
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 439 KGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINL 473
KG P+ TF L K R D L K++L
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 154/301 (51%), Gaps = 5/301 (1%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
+R V + ++I+S + + + ++ +M ++G+ + T+ ++ + + + +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
+A ++M N+ FN L++ CK+ + E+F M R D TY+ L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+G+ + L A+E F+EMVS P++V+Y I++D LC G ++A+E+ + ++ +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
IY++++H ++++DA D F + KG+K V YN +IG CK +
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYTMMIKMFC 386
++ME +G P+ T N++I + + G ++ ++ + K C DA T M+I M
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL-KRCGFSVDASTIKMVIDMLS 624
Query: 387 E 387
+
Sbjct: 625 D 625
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 170/368 (46%), Gaps = 38/368 (10%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
+RN Y ++I+ L + +++ +M KG+ N+ T+ I++ + A + D
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
+ M K ++ N+ F+ L+ + K +R+A+E+ M R PD TY+ L+
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+G+ K+ +L KA + MVS GC P++ ++ I+++ CKA R+D+ +E+ + M +
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 269 PTSFIYSVLVH----------------------------TYGV-------ENRIEDAIDA 293
+ Y+ L+ TY + E A++
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
F ++E+ ++ D+ +YN +I C A+K + + + GV P +T N++I L
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 354 QGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
+G A +FR+M + PD TY ++I+ + ++K+ +++K F T
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Query: 413 FSALINGL 420
+I+ L
Sbjct: 616 IKMVIDML 623
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 195/360 (54%), Gaps = 3/360 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLN-VETFCIVMRKYARAHKVDEAVYTF 155
TV ++ + ++A+ +QY+++ + +M +KG+ + + T I++ + R K+ A T
Sbjct: 87 TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTM 146
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
+ K + FN LL+ LC V +A E+ D M + +P L T + L+ G +
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+ A MV G P+ V+YG +++++CK+G+ A+E+++ M++ N + Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
S+++ + +++A + F EME KG KAD++ YN LIG FC A ++ + ++L++M
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDM 393
++PN T +V+I S + +G+ A ++ + M+ + P+ TY +I FC+ N ++
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A+++ M SK P + TF+ LING C+ L EM +G+ + VT+ L Q
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 186/355 (52%), Gaps = 3/355 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y ++ + + Q + +++ KM + + L+ + I++ + +D A FN M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 159 DKYEVPQNLAAFNGLLSALCKS-RNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNL 217
+ ++ +N L+ C + R A+ + D +K + P++ T+S+L++ + K+ L
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A + +EM+ G +P+ ++Y ++D CK R++EA+++V M C P +++L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
++ Y NRI+D ++ F EM +G+ A+ V YN L+ FC++ K + +++ +EM S V
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ + +++ L G ++A E+F ++ K E D Y ++I C +++D A
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + K ++ +I+ LC+ + KA +L +M E+G P +T+ L
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 192/441 (43%), Gaps = 40/441 (9%)
Query: 20 RMLSTGEPPPQ-EVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAG 78
RM+ G P + L +C S V L + +TG + + VL +G
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 79 MSAFRF-FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFC 136
+A +RN Y ++I+ L + +++ +M KG ++ T+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
++ + A + D+ M K ++ N+ F+ L+ + K +R+A ++ M R
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 197 -FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
P+ TY+ L++G+ K+ L +A + M+S GC PD++++ I+++ CKA R+D+
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
+E+ ++M + + Y+ LV + ++E A F EM + ++ D+V Y L+
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 316 FCKANKFKNVRRVLKEMESN-----------------------------------GVTPN 340
C + + + ++E + GV +
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWK 399
+R N++IS L + +A +FR+M + PD TY ++I+ ++ A ++ +
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 400 DMKSKRFVPSLHTFSALINGL 420
+MKS F + T +IN L
Sbjct: 603 EMKSSGFPADVSTVKMVINML 623
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 156/316 (49%), Gaps = 7/316 (2%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
+R + V + ++I+S + + + ++ +M +G+ N T+ ++ + + ++++
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
EA+ ++M ++ FN L++ CK+ + E+F M R + TY+ L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+G+ + L A++ F+EMVS PD+VSY I++D LC G +++A+E+ ++ +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
IY +++H ++++DA D F + KG+K D YN +I C+ + +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEP-DADTYTMMIKMFCE 387
++M G P+ T N++I + + A E+ M P D T M+I M
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-S 624
Query: 388 RNEMDMAMKIWKDMKS 403
E+D K + DM S
Sbjct: 625 SGELD---KSFLDMLS 637
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 7/300 (2%)
Query: 165 QNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETF 224
+NL+ + L S L + D ++ R P + ++ L K
Sbjct: 52 RNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC 111
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
++M S G + + + IM++ C+ ++ A + + P + I++ L++ +E
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
R+ +A++ M G K ++ N L+ C K + ++ M G PN T
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 345 NVIISSLISQGRTDRAFEVFRRM----IKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+++ + G+T A E+ R+M IK+ DA Y+++I C+ +D A ++ +
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKL---DAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
M+ K F + T++ LI G C G LL +MI++ I P+ VTF L +KE +
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 203/436 (46%), Gaps = 4/436 (0%)
Query: 39 VCKVMMSSP-GVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHT 97
+C V+ + P G + + L+ + PE V VL+R ++ A +F W ER+ H
Sbjct: 39 ICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVN-RAIEYFRWYERRTELPHC 97
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVM-RKYARAHKVDEAVYTFN 156
+Y+ ++ +AR R + + I+ +M G CI M +A+K+ E
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDP 215
+M K++ +A+ L+ A + +F M+ +EP + ++ L+ G+ K+
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+ A EM S+ D+V Y + +D K G+VD A + +++ N P Y+
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
++ NR+++A++ F +E+ YN +I + A KF +L+ +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAM 395
G P+ N I++ L G+ D A +VF M K P+ TY ++I M C ++D A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
++ M+ P++ T + +++ LC++ +AC + EEM K P +TF L L
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 456 IKEKREDVLTFLHEKI 471
K R D ++EK+
Sbjct: 458 GKVGRVDDAYKVYEKM 473
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 205/415 (49%), Gaps = 40/415 (9%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVM 139
A FE E+ R T AY+ MI ++ + ++ + R KG + +V + ++
Sbjct: 292 AVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFE 198
+ KVDEA+ F M K P NL+ +N L+ LC++ + A E+ DSM K
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P+++T +I+++ K L +A F EM C+PD +++ ++D L K GRVD+A +V
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+ M D++C S +Y+ L+ + R ED + +M + D+ + N + K
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADT 377
A + + R + +E+++ P++R+ +++I LI G + +E+F M + C D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF------------------------ 413
Y ++I FC+ +++ A ++ ++MK+K F P++ T+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 414 -----------SALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
S+LI+G + G +A ++LEE+++KG+ P+ T+ L L+K
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 176/370 (47%), Gaps = 4/370 (1%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
+I+ L ++ + + + KM + N + +++ + + ++ + M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKAR 221
+L N + + K+ K + +F+ +K R F PD ++YSIL+ G K +
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
E F M GC D +Y I++D CK G+V++A +++++M PT Y ++
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
+R+++A F E + K I+ +VV+Y++LI F K + +L+E+ G+TPN
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T N ++ +L+ + A F+ M ++ C P+ TY ++I C+ + + A W++
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
M+ + PS +++ +I+GL + GN +A L + G P + + + L R
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 461 E-DVLTFLHE 469
D + E
Sbjct: 813 AMDAFSLFEE 822
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 217/484 (44%), Gaps = 57/484 (11%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIE 106
+TL + + G + L +++ F G SA + + A V Y++ I+
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV-LYNVCID 246
Query: 107 SLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYARAHKVDEAV------------- 152
S ++ + + W ++ G+ E T+ ++ +A+++DEAV
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 153 --YTFNVM---------------------DKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
Y +N M K +P ++ A+N +L+ L K V +A ++
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP-SVIAYNCILTCLRKMGKVDEALKV 365
Query: 190 FDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
F+ MK P+L TY+IL++ + L A E M AG P+V + IMVD LCK+
Sbjct: 366 FEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
++DEA + ++MD C P + L+ G R++DA + +M + + +VY
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF----- 364
+LI F + ++ ++ K+M + +P+ + N + + G ++ +F
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 365 RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
RR + PDA +Y+++I + + +++ MK + V ++ +I+G C+ G
Sbjct: 546 RRFV----PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHE-------KINLLVKE 477
KA LLEEM KG P+ VT+G + L K R D L E ++N+++
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 478 PLCD 481
L D
Sbjct: 662 SLID 665
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 183/386 (47%), Gaps = 11/386 (2%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVM 139
A + FE E +++ A + Y+++I+ L R + +++ M+ G+ NV T I++
Sbjct: 362 ALKVFE--EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEP 199
+ ++ K+DEA F MD + F L+ L K V A ++++ M +
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM---LDS 476
Query: 200 DLKT----YSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
D +T Y+ L++ + + +++M++ CSPD+ +D + KAG ++
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
+ +++ +P + YS+L+H + + F M+ +G D YN +I
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPD 374
FCK K ++L+EM++ G P T +I L R D A+ +F K E +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
Y+ +I F + +D A I +++ K P+L+T+++L++ L + +A V +
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 435 EMIEKGIRPSRVTFGKLRQLLIKEKR 460
M E P++VT+G L L K ++
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRK 742
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKV 148
+ R + R+Y ++I L + +++ M+ +G +L+ + IV+ + + KV
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSIL 207
++A M + + ++ L K + +A +F+ K R E ++ YS L
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
++G+GK + +A E++ G +P++ ++ ++D L KA ++EA+ + M + C
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P Y +L++ + A + EM+++G+K + Y +I KA
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
+ ++NG P+S N +I L + R AF +F
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 126/267 (47%), Gaps = 2/267 (0%)
Query: 87 WAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARA 145
++ +++ RAY+++I+ + + + ++ +M+ KG V T+ V+ A+
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 146 HKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS-MKGRFEPDLKTY 204
++DEA F + N+ ++ L+ K + +A I + M+ P+L T+
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 205 SILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDD 264
+ LL+ K + +A F+ M C+P+ V+YGI+++ LCK + ++A ++M
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 265 NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN 324
P++ Y+ ++ I +A F + G D YNA+I N+ +
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMD 815
Query: 325 VRRVLKEMESNGVTPNSRTCNVIISSL 351
+ +E G+ +++TC V++ +L
Sbjct: 816 AFSLFEETRRRGLPIHNKTCVVLLDTL 842
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 198/409 (48%), Gaps = 29/409 (7%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYH--------------------LMIESLARIRQYQIMWD 119
+A F W + Y H+V +Y LMI+S + + D
Sbjct: 105 TALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLD 164
Query: 120 IVTKMRN------KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGL 173
+ KM K L + + ++ AR VDE + M + +V N+ +N +
Sbjct: 165 LCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 174 LSALCKSRNVRKA-QEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
++ CK NV +A Q + ++ +PD TY+ L+ G+ + +L A + F EM GC
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
+ V+Y ++ LC A R+DEA+++ M D+ C PT Y+VL+ + R +A++
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 293 AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLI 352
EME GIK ++ Y LI + C KF+ R +L +M G+ PN T N +I+
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 353 SQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLH 411
+G + A +V M + P+ TY +IK +C+ N + AM + M ++ +P +
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVV 463
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
T+++LI+G C++GN A LL M ++G+ P + T+ + L K KR
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 180/365 (49%), Gaps = 4/365 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
+ Y ++I+SL +++ +++ +M KG++ NV T+ ++ Y + +++AV
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDP 215
+M+ ++ N +N L+ CKS NV KA + + M R PD+ TY+ L++G +
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
N A M G PD +Y M+D LCK+ RV+EA ++ ++ P +Y+
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
L+ Y ++++A +M K + + +NALI C K K + ++M
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMA 394
G+ P T ++I L+ G D A+ F++M+ +PDA TYT I+ +C + A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+ M+ P L T+S+LI G G A +L+ M + G PS+ TF L +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 455 LIKEK 459
L++ K
Sbjct: 717 LLEMK 721
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFN 156
+ Y+ M+ ++ + V+K+ G+ + T+ ++ Y + +D A FN
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDP 215
M +N A+ L+ LC +R + +A ++F MK P ++TY++L++
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+A +EM G P++ +Y +++D LC + ++A E++ M + MP Y+
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
L++ Y IEDA+D ME + + + YN LI +CK+N K + VL +M
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLER 456
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMA 394
V P+ T N +I G D A+ + M + PD TYT MI C+ ++ A
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
++ ++ K P++ ++ALI+G C+ G +A ++LE+M+ K P+ +TF L
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 455 LIKEKREDVLTFLHEKI 471
L + + T L EK+
Sbjct: 577 LCADGKLKEATLLEEKM 593
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 180/393 (45%), Gaps = 21/393 (5%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDE 150
R + R Y+ +I+ + ++ M + + K + +V T+ ++ R+ D
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLE 209
A ++M+ + + + ++ +LCKS+ V +A ++FDS++ + P++ Y+ L++
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
G+ K + +A +M+S C P+ +++ ++ LC G++ EA + + M P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
T ++L+H + + A F +M G K D Y I +C+ + + ++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCER 388
+M NGV+P+ T + +I G+T+ AF+V +RM CEP T+ +IK E
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 389 N------------------EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
E D +++ + M P+ ++ LI G+C+ GN A
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 431 VLLEEMI-EKGIRPSRVTFGKLRQLLIKEKRED 462
+ + M +GI PS + F L K K+ +
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 160/436 (36%), Gaps = 110/436 (25%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIV 138
SA+R R Y MI+SL + ++ + D+ + KG+ NV + +
Sbjct: 480 SAYRLLSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI--------- 189
+ Y +A KVDEA M N FN L+ LC +++A +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 190 -------------------FDSMKGRFE--------PDLKTYSILLEGWGKDPNLPKARE 222
FD RF+ PD TY+ ++ + ++ L A +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT-----SFIYSVL 277
+M G SPD+ +Y ++ G+ + A +V+K M D C P+ S I +L
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 278 VHTYG------------------------VENRIEDAI---------------------- 291
YG +E +E ++
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 292 --DAFLEMER-KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
F M+R +GI +V+NAL+ CK K +V+ +M G P +C V+I
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Query: 349 SSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
L +G +R VF+ +++ C E ++A KI D K+ +
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQ----------------CGYYEDELAWKIIIDGVGKQGL- 881
Query: 409 SLHTFSALINGLCQNG 424
+ F L N + +NG
Sbjct: 882 -VEAFYELFNVMEKNG 896
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 345 NVIISSLISQGRTDRAFEVFRRMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
N +++SL G D +V+ M+ K+C P+ TY M+ +C+ ++ A + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
P T+++LI G CQ + A + EM KG R + V + L L +R D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 463 VLTFLHEKINLLVK 476
E ++L VK
Sbjct: 306 ------EAMDLFVK 313
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 199/388 (51%), Gaps = 21/388 (5%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM--RNKGMLNVET--FC 136
RFF+W + ++H +++ LM+E L R R + + + + R+ G + ++ F
Sbjct: 84 GLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
++R Y A E+V F M + + ++ FN LLS L K A ++FD M+
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 197 F--EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE 254
+ PD T++ L+ G+ K+ + +A F++M C+PDVV+Y ++D LC+AG+V
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 255 AVEVVKDM--DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
A V+ M + P Y+ LV Y ++ I++A+ F +M +G+K + V YN L
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVT--PNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
I +A+++ ++ +L T P++ T N++I + G D A +VF+ M+ +
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 371 -CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV-------PSLHTFSALINGLCQ 422
PD+ +Y+++I+ C RNE D A ++ ++ K + P ++ + LC
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCA 442
Query: 423 NGNAMKACVLLEEMIEKGIR--PSRVTF 448
NG +A + +++++G++ PS T
Sbjct: 443 NGKTKQAEKVFRQLMKRGVQDPPSYKTL 470
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 190/437 (43%), Gaps = 58/437 (13%)
Query: 60 VRASPELVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIM 117
V+ ++++ + NAG+ + + F+ +Q + +V ++ ++ L + + +
Sbjct: 134 VKLQDRYFNSLIRSYGNAGLFQESVKLFQ-TMKQMGISPSVLTFNSLLSILLKRGRTGMA 192
Query: 118 WDIVTKMRNKGMLNVE--TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLS 175
D+ +MR + + TF ++ + + VDEA F M+ Y ++ +N ++
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIID 252
Query: 176 ALCKSRNVRKAQEIFDSMKGR---FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
LC++ V+ A + M + P++ +Y+ L+ G+ + +A F +M+S G
Sbjct: 253 GLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL 312
Query: 233 SPDVVSYGIMV-------------DIL------------------------CKAGRVDEA 255
P+ V+Y ++ DIL C AG +D A
Sbjct: 313 KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAA 372
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI-------KADVVV 308
++V ++M + P S YSVL+ T + N + A F E+ K + K
Sbjct: 373 MKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAA 432
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVT--PNSRTCNVIISSLISQGRTDRAFEVFRR 366
YN + C K K +V +++ GV P+ +T +I+ +G+ A+E+
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKT---LITGHCREGKFKPAYELLVL 489
Query: 367 MIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
M++ PD +TY ++I + E +A + M ++P TF +++ L +
Sbjct: 490 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 549
Query: 426 AMKACVLLEEMIEKGIR 442
A ++ L+ M+EK IR
Sbjct: 550 ANESFCLVTLMLEKRIR 566
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 117/239 (48%), Gaps = 7/239 (2%)
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD--DNNCMPTSFIY-SVLVHTYGVENRI 287
G S S+ +M++ L +A ++ A + ++ N C+ Y + L+ +YG
Sbjct: 95 GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLF 154
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME-SNGVTPNSRTCNV 346
++++ F M++ GI V+ +N+L+ K + + EM + GVTP+S T N
Sbjct: 155 QESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNT 214
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDM--KS 403
+I+ D AF +F+ M + C PD TY +I C ++ +A + M K+
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
P++ +++ L+ G C +A ++ +M+ +G++P+ VT+ L + L + R D
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD 333
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/483 (18%), Positives = 182/483 (37%), Gaps = 87/483 (18%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM---LNVETFCI 137
AFR F+ E V Y+ +I+ L R + +I ++++ M K NV ++
Sbjct: 228 AFRIFKDMELYHCNPDVV-TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-- 195
++R Y ++DEAV F+ M + N +N L+ L ++ + EI D + G
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH---RYDEIKDILIGGN 343
Query: 196 ----RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
F PD T++IL++ +L A + F+EM++ PD SY +++ LC
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 252 VDEAVEVVKDM-------DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK- 303
D A + ++ + C P + Y+ + + + A F ++ ++G++
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD 463
Query: 304 ---------------------------------ADVVVYNALIGAFCKANKFKNVRRVLK 330
D+ Y LI K + L+
Sbjct: 464 PPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQ 523
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERN 389
M + P + T + +++ L + + +F + M+ K + D T ++++
Sbjct: 524 RMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSA 583
Query: 390 EMDMAMKIWKDMKSKRFVPSL----------------HTF----------------SALI 417
+ + A I + + ++ + HT + +I
Sbjct: 584 QKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVI 643
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKE 477
GLC++ +A L E++E G LR L + + L F+ +++ L +
Sbjct: 644 EGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRES 703
Query: 478 PLC 480
C
Sbjct: 704 DDC 706
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 189/360 (52%), Gaps = 3/360 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
++ ++ ++ ++A++ +++++ + +M+ G+ ++ T+ I + + R ++ A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ + LL+ C S+ + A + D M + ++PD T++ L+ G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A +MV GC PD+V+YG +V+ LCK G +D A+ ++ M+ I+
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ ++ + +E A+D F EME KGI+ +VV YN+LI C ++ + R+L M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDM 393
+ PN T N +I + +G+ A ++ MI + +PD TY ++I FC N +D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A +++K M SK +P++ T++ LING C+ L EM ++G+ + VT+ + Q
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 201/450 (44%), Gaps = 10/450 (2%)
Query: 8 RKKLLCKFVSFARMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPEL 66
R +L A+M+ G EP ++ L C S V L + + G +
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 67 VENVLKRF--ENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM 124
++ N A + QR + Y ++ L + + +++ KM
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 125 RNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
+ NV F ++ + V+ AV F M+ + N+ +N L++ LC
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 184 RKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
A + +M + + P++ T++ L++ + K+ L +A + EM+ PD ++Y ++
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
++ C R+DEA ++ K M +C+P Y+ L++ + R+ED ++ F EM ++G+
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
+ V Y +I F +A + + V K+M SN V + T ++++ L S G+ D A
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 363 VFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
+F+ + K E + Y MI+ C+ ++ A W S P + T++ +I+GLC
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLC 546
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+A L +M E G P+ T+ L
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 3/335 (0%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGR 196
++ A+ +K + + M + +L ++ ++ C+ + A + M K
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+EPD+ T S LL G+ + A +MV G PD ++ ++ L + EAV
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+V M C P Y +V+ I+ A++ +ME IKA+VV++N +I +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDA 375
CK + + EME+ G+ PN T N +I+ L + GR A + M+ K P+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
T+ +I F + ++ A K+ ++M + P T++ LING C + +A + +
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 436 MIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHE 469
M+ K P+ T+ L K KR ED + E
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 2/291 (0%)
Query: 183 VRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
V A ++F D +K R P + ++ LL K +M + G S D+ +Y I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++ C+ ++ A+ V+ M P S L++ Y RI DA+ +M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
K D + LI NK ++ +M G P+ T +++ L +G D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 362 EVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
+ +M + + + +I C+ +++A+ ++ +M++K P++ T+++LIN L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
C G A LL M+EK I P+ VTF L KE + LHE++
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
T+ +++ + +++DEA F M + N+ +N L++ CK + V E+F M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 194 KGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
R + TY+ +++G+ + + A+ F++MVS D+++Y I++ LC G++
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
D A+ + K + + FIY+ ++ ++ +A D F + IK DVV YN +
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTM 541
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
I C + + ++M+ +G PNS T N +I
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+++DA+D F +M + +V +N L+ A K NKF+ V + ++M++ G++ + T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 346 VIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+ I+ + + A V +M+K+ EPD T + ++ +C + A+ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVL 464
+ P TF+ LI+GL + A +A L+++M+++G +P VT+G + L K D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 465 TFLHEKI 471
L K+
Sbjct: 243 LNLLNKM 249
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 10/337 (2%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQ-NLAAFNGLLSALCKSRNVRKAQEIFDS 192
T+ +M + +VD A F Y +P+ + FN L+ + A+ +
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLF-----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 193 MKGRFE--PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
M + PD+ TY+ L+ G+ K+ + A E +M + GC P+V SY I+VD CK G
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++DEA V+ +M + P + ++ L+ + E+RI +A++ F EM RKG K DV +N
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
+LI C+ ++ K+ +L++M S GV N+ T N +I++ + +G A ++ M+
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 371 CEP-DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
P D TY +IK C E+D A +++ M PS + + LINGLC++G +A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 430 CVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR-EDVLT 465
+EM+ +G P VTF L L + R ED LT
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 165/346 (47%), Gaps = 36/346 (10%)
Query: 119 DIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
+++ MRNKG NV ++ I++ + + K+DEA N M + N FN L+SA
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 178 CKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
CK + P+A E FREM GC PDV
Sbjct: 470 CKEHRI----------------------------------PEAVEIFREMPRKGCKPDVY 495
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
++ ++ LC+ + A+ +++DM + + Y+ L++ + I++A EM
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
+G D + YN+LI C+A + R + ++M +G P++ +CN++I+ L G
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 358 DRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+ A E + M+ + PD T+ +I C ++ + +++ ++++ P TF+ L
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
++ LC+ G AC+LL+E IE G P+ T+ L Q +I ++ D
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 214/466 (45%), Gaps = 48/466 (10%)
Query: 50 TLDAALNQT---GVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYA--HTVRAYHLM 104
T+D L Q G+ L ++++ ++ AG E + Y+ T ++Y+++
Sbjct: 129 TIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVV 188
Query: 105 IESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEV 163
+E L +++ ++ M ++ + + TF +VM+ + +++D A+ M K+
Sbjct: 189 LEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 248
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARE 222
N + L+ +L K V +A ++ + M PD +T++ ++ G K + +A +
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
M+ G +PD ++YG +++ LCK GRVD A KD+ P I++ L+H +
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFV 364
Query: 283 VENRIEDA------------------------------------IDAFLEMERKGIKADV 306
R++DA ++ +M KG K +V
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
Y L+ FCK K VL EM ++G+ PN+ N +IS+ + R A E+FR
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 367 MI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
M K C+PD T+ +I CE +E+ A+ + +DM S+ V + T++ LIN + G
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
+A L+ EM+ +G +T+ L + L + D L EK+
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 179/416 (43%), Gaps = 69/416 (16%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVET-FCIV 138
++ F W Q Y H+ Y ++I L +++ + ++ +M+++G++ E+ F +
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISI 152
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL-CKSRNVRKAQEIFDSMKGRF 197
MR Y +A F G + L + RNV
Sbjct: 153 MRDYDKA-----------------------GFPGQTTRLMLEMRNVYSC----------- 178
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
EP K+Y+++LE A F +M+S P + ++G+++ C +D A+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+++DM + C+P S IY L+H+ NR+ +A+ EM G D +N +I C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI------- 370
K ++ +++ M G P+ T +++ L GR D A ++F R+ K
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 371 --------------------------CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
PD TY +I + + + +A+++ DM++K
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
P++++++ L++G C+ G +A +L EM G++P+ V F L KE R
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 142/307 (46%), Gaps = 37/307 (12%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKV 148
R + V +Y ++++ ++ + ++++ +M G+ N F ++ + + H++
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALC------------------------------ 178
EAV F M + ++ FN L+S LC
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 179 -----KSRNVRKAQEIFDSMKGRFEP-DLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
+ +++A+++ + M + P D TY+ L++G + + KAR F +M+ G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
+P +S I+++ LC++G V+EAVE K+M P ++ L++ RIED +
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 293 AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLI 352
F +++ +GI D V +N L+ CK + +L E +G PN RT ++++ S+I
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Query: 353 SQGRTDR 359
Q DR
Sbjct: 716 PQETLDR 722
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
+ G + VY LIG +FK + R+L +M+ G+ ++ IS + +
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKE---SLFISIMRDYDKAG 160
Query: 359 RAFEVFRRMIKI-----CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
+ R M+++ CEP +Y +++++ N +A ++ DM S++ P+L TF
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF 220
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHE 469
++ C A LL +M + G P+ V + L L K R + L L E
Sbjct: 221 GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 188/358 (52%), Gaps = 3/358 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
++ + ++ ++A++ ++ ++ + +M+N G+ N+ T+ I++ + R ++ A+
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ N LL+ C + A + M + ++PD T++ L+ G +
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A MV GC PD+V+YGI+V+ LCK G +D A+ ++K M+ P IY
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ ++ + DA++ F EM+ KGI+ +VV YN+LI C ++ + R+L +M
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDM 393
+ PN T + +I + + +G+ A +++ MIK +PD TY+ +I FC + +D
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A +++ M SK P++ T++ LI G C+ + L EM ++G+ + VT+ L
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 177/355 (49%), Gaps = 3/355 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y +++ L + + ++ KM + K V + ++ V++A+ F M
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNL 217
D + N+ +N L+ LC A + D ++ + P++ T+S L++ + K+ L
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A + + EM+ PD+ +Y +++ C R+DEA + + M +C P Y+ L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ + R+++ ++ F EM ++G+ + V Y LI F +A + N + V K+M S+GV
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ T ++++ L + G+ + A VF + + EPD TY +MI+ C+ +++
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + K P++ T++ +++G C+ G +A L EM E+G P T+ L
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 192/391 (49%), Gaps = 18/391 (4%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
VT +N R +L ++LK+ E Q V Y+ +I++L
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKME---------------QGKIEPGVVIYNTIIDAL 266
Query: 109 ARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
+ ++ T+M NKG+ NV T+ ++R + +A + M + ++ N+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFRE 226
F+ L+ A K + +A++++D M K +PD+ TYS L+ G+ L +A+ F
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
M+S C P+VV+Y ++ CKA RVDE +E+ ++M + + Y+ L+H +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
++A F +M G+ D++ Y+ L+ C K + V + ++ + + P+ T N+
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+I + G+ + +++F + +K +P+ TYT M+ FC + + A ++++MK +
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
+P T++ LI ++G+ + L+ EM
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
D L A F +MV + P +V + ++ + K + D + + + M + +
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
YS+L++ + +++ A+ +M + G + D+V N+L+ FC N+ + ++ +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMD 392
G P+S T N +I L R A + RM +K C+PD TY +++ C+R ++D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
+A+ + K M+ + P + ++ +I+ LC N A L EM KGIRP+ VT+ L
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 453 QLLIKEKR 460
+ L R
Sbjct: 299 RCLCNYGR 306
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 131/258 (50%), Gaps = 4/258 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ T+ ++ + ++DEA + F +M + N+ +N L+ CK++ V + E+F
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M R + TY+ L+ G+ + A+ F++MVS G PD+++Y I++D LC
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G+V+ A+ V + + + P + Y++++ ++ED D F + KG+K +VV Y
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
++ FC+ + + +EM+ G P+S T N +I + + G + E+ R M +
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-R 598
Query: 370 ICE--PDADTYTMMIKMF 385
C DA T ++ M
Sbjct: 599 SCRFVGDASTIGLVTNML 616
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 191 DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
D +K R P + +S LL K +M + G S ++ +Y I+++ C+
Sbjct: 71 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++ A+ V+ M P + L++ + NRI DA+ +M G + D +N
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK- 369
LI + N+ ++ M G P+ T ++++ L +G D A + ++M +
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 370 ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
EP Y +I C ++ A+ ++ +M +K P++ T+++LI LC G A
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 430 CVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
LL +MIE+ I P+ VTF L +KE +
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 101/194 (52%), Gaps = 1/194 (0%)
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+++DA++ F +M + +V ++ L+ A K NKF V + ++M++ G++ N T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 346 VIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
++I+ + + A V +M+K+ EPD T ++ FC N + A+ + M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVL 464
+ P TF+ LI+GL ++ A +A L++ M+ KG +P VT+G + L K D+
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 465 TFLHEKINLLVKEP 478
L +K+ EP
Sbjct: 241 LSLLKKMEQGKIEP 254
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 38/407 (9%)
Query: 92 RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDE 150
+ Y V +Y ++ R + +W ++ M+ KG+ N + ++ R K+ E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-------------- 196
A F+ M + + + + L+ CK ++R A + F M R
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 197 ----------------------FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSP 234
EPD T++ L+ G+ K ++ A M+ AGCSP
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
+VV+Y ++D LCK G +D A E++ +M P F Y+ +V+ IE+A+
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
E E G+ AD V Y L+ A+CK+ + + +LKEM G+ P T NV+++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 355 GRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
G + ++ M+ K P+A T+ ++K +C RN + A I+KDM S+ P T+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
L+ G C+ N +A L +EM KG S T+ L + +K K+
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 200/425 (47%), Gaps = 6/425 (1%)
Query: 44 MSSPGVTLDAALNQTGVRASPELVENVLKRFE-NAGMSAFRFFEW-AERQRNYAHTVRAY 101
+ S + + A+ ++ + L+ + +R + N S +FF+ +++ R +
Sbjct: 119 LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVF 178
Query: 102 HLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYAR-AHKVDEAVYTFNVMD 159
+ + L + + KM N G+ L+V++ + + + ++ +K A+ F
Sbjct: 179 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP 238
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLP 218
+ V N+A++N ++ +C+ +++A + M+ + + PD+ +YS ++ G+ + L
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
K + M G P+ YG ++ +LC+ ++ EA E +M +P + +Y+ L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+ I A F EM + I DV+ Y A+I FC+ ++ EM G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKI 397
P+S T +I+ G AF V MI+ C P+ TYT +I C+ ++D A ++
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+M P++ T+++++NGLC++GN +A L+ E G+ VT+ L K
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 458 EKRED 462
D
Sbjct: 539 SGEMD 543
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 181/414 (43%), Gaps = 60/414 (14%)
Query: 104 MIESLARIR-QYQIMWDIVTKMRNKGMLNVETFCIVMR--KYARAHKVDEAVYT------ 154
+I L +I+ Y+++ D R++ N+E+ CIV+ ++ KV +++ +
Sbjct: 90 LIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERP 149
Query: 155 -FNVMDKY------------EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG------ 195
NV D + + + F+ L +R+A+ +F+ M
Sbjct: 150 KLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLS 209
Query: 196 ---------RFEPD----------------------LKTYSILLEGWGKDPNLPKARETF 224
R D + +Y+I++ + + +A
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
M G +PDV+SY +V+ C+ G +D+ ++++ M P S+IY ++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
++ +A +AF EM R+GI D VVY LI FCK + + EM S +TP+ T
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 345 NVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
IIS G A ++F M K EPD+ T+T +I +C+ M A ++ M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
P++ T++ LI+GLC+ G+ A LL EM + G++P+ T+ + L K
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV T+ ++ + +D A + M K + N+ +N +++ LCKS N+ +A ++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 191 DSMKGRFEP-----DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
G FE D TY+ L++ + K + KA+E +EM+ G P +V++ ++++
Sbjct: 515 ----GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
C G +++ +++ M P + ++ LV Y + N ++ A + +M +G+ D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
Y L+ CKA K + +EM+ G + + T +V+I + + + A EVF
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 366 RM 367
+M
Sbjct: 691 QM 692
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 2/252 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
Q + V Y +I+ L + +++ +M G+ N+ T+ ++ ++ ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
EAV + + + + L+ A CKS + KAQEI M G+ +P + T+++L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G+ L + M++ G +P+ ++ +V C + A + KDM
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y LV + +++A F EM+ KG V Y+ LI F K KF R V
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 329 LKEMESNGVTPN 340
+M G+ +
Sbjct: 689 FDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 38/407 (9%)
Query: 92 RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDE 150
+ Y V +Y ++ R + +W ++ M+ KG+ N + ++ R K+ E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-------------- 196
A F+ M + + + + L+ CK ++R A + F M R
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 197 ----------------------FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSP 234
EPD T++ L+ G+ K ++ A M+ AGCSP
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
+VV+Y ++D LCK G +D A E++ +M P F Y+ +V+ IE+A+
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
E E G+ AD V Y L+ A+CK+ + + +LKEM G+ P T NV+++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 355 GRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
G + ++ M+ K P+A T+ ++K +C RN + A I+KDM S+ P T+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
L+ G C+ N +A L +EM KG S T+ L + +K K+
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 200/425 (47%), Gaps = 6/425 (1%)
Query: 44 MSSPGVTLDAALNQTGVRASPELVENVLKRFE-NAGMSAFRFFEW-AERQRNYAHTVRAY 101
+ S + + A+ ++ + L+ + +R + N S +FF+ +++ R +
Sbjct: 119 LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVF 178
Query: 102 HLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYAR-AHKVDEAVYTFNVMD 159
+ + L + + KM N G+ L+V++ + + + ++ +K A+ F
Sbjct: 179 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP 238
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLP 218
+ V N+A++N ++ +C+ +++A + M+ + + PD+ +YS ++ G+ + L
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
K + M G P+ YG ++ +LC+ ++ EA E +M +P + +Y+ L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+ I A F EM + I DV+ Y A+I FC+ ++ EM G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKI 397
P+S T +I+ G AF V MI+ C P+ TYT +I C+ ++D A ++
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+M P++ T+++++NGLC++GN +A L+ E G+ VT+ L K
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 458 EKRED 462
D
Sbjct: 539 SGEMD 543
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 181/414 (43%), Gaps = 60/414 (14%)
Query: 104 MIESLARIR-QYQIMWDIVTKMRNKGMLNVETFCIVMR--KYARAHKVDEAVYT------ 154
+I L +I+ Y+++ D R++ N+E+ CIV+ ++ KV +++ +
Sbjct: 90 LIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERP 149
Query: 155 -FNVMDKY------------EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG------ 195
NV D + + + F+ L +R+A+ +F+ M
Sbjct: 150 KLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLS 209
Query: 196 ---------RFEPD----------------------LKTYSILLEGWGKDPNLPKARETF 224
R D + +Y+I++ + + +A
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
M G +PDV+SY +V+ C+ G +D+ ++++ M P S+IY ++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
++ +A +AF EM R+GI D VVY LI FCK + + EM S +TP+ T
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 345 NVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
IIS G A ++F M K EPD+ T+T +I +C+ M A ++ M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
P++ T++ LI+GLC+ G+ A LL EM + G++P+ T+ + L K
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV T+ ++ + +D A + M K + N+ +N +++ LCKS N+ +A ++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 191 DSMKGRFEP-----DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
G FE D TY+ L++ + K + KA+E +EM+ G P +V++ ++++
Sbjct: 515 ----GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
C G +++ +++ M P + ++ LV Y + N ++ A + +M +G+ D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
Y L+ CKA K + +EM+ G + + T +V+I + + + A EVF
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 366 RM 367
+M
Sbjct: 691 QM 692
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 2/252 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
Q + V Y +I+ L + +++ +M G+ N+ T+ ++ ++ ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
EAV + + + + L+ A CKS + KAQEI M G+ +P + T+++L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G+ L + M++ G +P+ ++ +V C + A + KDM
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y LV + +++A F EM+ KG V Y+ LI F K KF R V
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 329 LKEMESNGVTPN 340
+M G+ +
Sbjct: 689 FDQMRREGLAAD 700
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 171/321 (53%), Gaps = 4/321 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK-SRNVRKAQEI 189
NV T+ ++R + ++ AV FN M N+ +N L++ LC+ R A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 190 FDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
D MK R EP++ T++ L++ + K L +A+E + M+ PDV +YG +++ LC
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G +DEA ++ M+ N C P IY+ L+H + R+ED + F EM +KG+ A+ + Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
LI +C + + V +M S P+ RT NV++ L G+ ++A +F M K
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 370 ICEPDAD--TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
E D + TYT++I+ C+ +++ A ++ + SK P++ T++ +I+G C+ G
Sbjct: 427 R-EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 428 KACVLLEEMIEKGIRPSRVTF 448
+A L ++M E G P+ +
Sbjct: 486 EADSLFKKMKEDGFLPNESVY 506
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 174/365 (47%), Gaps = 4/365 (1%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGMLNVETFC-IVMRKYARAHKVDEAVYTFNVMDKYE 162
++ +A++ +Y ++ + +M+ G+ + C IVM + + A M K
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKAR 221
+L F LL+ C + A +FD + G F+P++ TY+ L+ K+ +L A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
E F +M + G P+VV+Y +V LC+ GR +A +++DM P ++ L+ +
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
++ +A + + M + + DV Y +LI C R++ ME NG PN
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+I R + ++F M K + TYT++I+ +C D+A +++
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK-EK 459
M S+R P + T++ L++GLC NG KA ++ E M ++ + + VT+ + Q + K K
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 460 REDVL 464
ED
Sbjct: 449 VEDAF 453
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 166/383 (43%), Gaps = 21/383 (5%)
Query: 93 NYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKV---- 148
+A V+ +HL + + QI + R L++ FC +R ++ K+
Sbjct: 8 GFASIVKGFHLH----SHRHRLQI-----SNPRTAASLSLCGFCFWIRAFSSYRKILRNG 58
Query: 149 ------DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDL 201
++A+ F M ++ F LLS + K +F+ M+ P L
Sbjct: 59 LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL 118
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
T +I++ +A +M+ G PD+V++ +++ C R+++A+ +
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 178
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ P Y+ L+ + A++ F +M G + +VV YNAL+ C+ +
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTM 380
+ + +L++M + PN T +I + + G+ A E++ MI++ PD TY
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+I C +D A +++ M+ P+ ++ LI+G C++ + EM +KG
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 441 IRPSRVTFGKLRQLLIKEKREDV 463
+ + +T+ L Q R DV
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDV 381
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 3/287 (1%)
Query: 186 AQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
A ++F M R P + ++ LL K F +M G P + + I++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
+C + + A + M P ++ L++ Y NRIEDAI F ++ G K
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
+VV Y LI CK + + +M +NG PN T N +++ L GR A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 365 RRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
R M+K EP+ T+T +I F + ++ A +++ M P + T+ +LINGLC
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 424 GNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHE 469
G +A + M G P+ V + L K KR ED + +E
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 191/388 (49%), Gaps = 10/388 (2%)
Query: 63 SPELVENVLKRFENA---GMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWD 119
SPE V VL R A G+ A FF+++ + + T ++ + LAR+R + W
Sbjct: 65 SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWA 124
Query: 120 IVTKMRNK--GMLNVETFCIVMRKYARAHKVDEAVYTFNVMDK--YEVPQNLAAFNGLLS 175
++ ++R +L+ ++ I++ K A+ +E + F M+K + + FN LL
Sbjct: 125 LMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLR 184
Query: 176 ALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
A C R +++A+ IF+ + RF PD+KT +ILL G+ + ++ + EMV G P+
Sbjct: 185 AFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPN 244
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL 295
V+YGI +D CK EA+ + +DMD + T I + L+H GV A F
Sbjct: 245 SVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFD 304
Query: 296 EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
E+ ++G+ D YNAL+ + K +V+KEME G+ P+S T + + ++
Sbjct: 305 EISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSK 364
Query: 356 R--TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
+ E +++M + P T M++K+FC E+++ + +WK M K + P H
Sbjct: 365 EFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHA 424
Query: 413 FSALINGLCQNGNAMKACVLLEEMIEKG 440
L LC A A + +E+G
Sbjct: 425 LELLTTALCARRRANDAFECSWQTVERG 452
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 198/394 (50%), Gaps = 48/394 (12%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
++ + ++AR +QY ++ M G+ ++ T I++ Y R K+ ++ F+V+
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL---LFAFSVLG 129
Query: 160 K-----YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGK 213
+ YE P + F+ L++ C V +A + D M + + PDL T S L+ G
Sbjct: 130 RAWKLGYE-PDTIT-FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+ +A MV G PD V+YG +++ LCK+G A+++ + M++ N +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
YS+++ + + +DA+ F EME KGIKADVV Y++LIG C K+ + ++L+EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI------------------------- 368
+ P+ T + +I + +G+ A E++ MI
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 369 -----------KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
K CEPD TY+++I +C+ +D M++++++ SK +P+ T++ L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
G CQ+G A L +EM+ +G+ PS VT+G L
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 177/355 (49%), Gaps = 3/355 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y ++ L + + D+ KM + + +V + IV+ + D+A+ FN M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ + ++ ++ L+ LC ++ M GR PD+ T+S L++ + K+ L
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A+E + EM++ G +PD ++Y ++D CK + EA ++ M C P YS+L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+++Y R++D + F E+ KG+ + + YN L+ FC++ K + + +EM S GV
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ T +++ L G ++A E+F +M K Y ++I C +++D A
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + K P + T++ +I GLC+ G+ +A +L +M E G P T+ L
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 192/415 (46%), Gaps = 6/415 (1%)
Query: 27 PPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRF-- 84
P V+ L +C S + L + + G + VL R +G SA
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 85 FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYA 143
F E +RN +V Y ++I+SL + + + +M KG+ +V T+ ++
Sbjct: 233 FRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLK 202
K D+ M + ++ F+ L+ K + +A+E+++ M R PD
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+ L++G+ K+ L +A + F MVS GC PD+V+Y I+++ CKA RVD+ + + +++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
+P + Y+ LV + ++ A + F EM +G+ VV Y L+ C +
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMM 381
+ ++M+ + +T N+II + + + D A+ +F + K +PD TY +M
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 382 IKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
I C++ + A +++ MK P T++ LI + + L+EEM
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 155/322 (48%), Gaps = 2/322 (0%)
Query: 143 ARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKGRFEPDL 201
AR + D + M+ + ++ +++ C+ + + A + + K +EPD
Sbjct: 81 ARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDT 140
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
T+S L+ G+ + + +A MV PD+V+ +++ LC GRV EA+ ++
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M + P Y +++ A+D F +ME + IKA VV Y+ +I + CK
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTM 380
F + + EME G+ + T + +I L + G+ D ++ R MI + PD T++
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+I +F + ++ A +++ +M ++ P T+++LI+G C+ +A + + M+ KG
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 441 IRPSRVTFGKLRQLLIKEKRED 462
P VT+ L K KR D
Sbjct: 381 CEPDIVTYSILINSYCKAKRVD 402
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 2/314 (0%)
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYS 205
KV++A+ F M + FN L SA+ +++ M+ E D+ T +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
I++ + + L A G PD +++ +V+ C GRV EAV +V M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P S L++ ++ R+ +A+ M G + D V Y ++ CK+
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKM 384
+ ++ME + + +++I SL G D A +F M +K + D TY+ +I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
C + D K+ ++M + +P + TFSALI+ + G ++A L EMI +GI P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 445 RVTFGKLRQLLIKE 458
+T+ L KE
Sbjct: 350 TITYNSLIDGFCKE 363
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
V+ ++ DAID F M + + +N L A + ++ V K ME NG+ +
Sbjct: 47 VDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T ++I+ + + AF V R K+ EPD T++ ++ FC + A+ + M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+ P L T S LINGLC G +A VL++ M+E G +P VT+G + L K
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 111/250 (44%), Gaps = 1/250 (0%)
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
D + A + F M+ + P + + + + + + D + K M+ N +
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
+++++ Y + ++ A + G + D + ++ L+ FC + ++ M
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMD 392
P+ T + +I+ L +GR A + RM++ +PD TY ++ C+
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
+A+ +++ M+ + S+ +S +I+ LC++G+ A L EM KGI+ VT+ L
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 453 QLLIKEKRED 462
L + + D
Sbjct: 288 GGLCNDGKWD 297
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 180/358 (50%), Gaps = 4/358 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYARAHKVDEAVYTFN 156
V ++++I++L R Q + ++ M + G++ E TF VM+ Y +D A+
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR--FEPDLKTYSILLEGWGKD 214
M ++ + + N ++ CK V A M + F PD T++ L+ G K
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
++ A E M+ G PDV +Y ++ LCK G V EAVEV+ M +C P + Y
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L+ T EN++E+A + + KGI DV +N+LI C + + +EM S
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDM 393
G P+ T N++I SL S+G+ D A + ++M + C TY +I FC+ N+
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A +I+ +M+ + T++ LI+GLC++ A L+++MI +G +P + T+ L
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 179/366 (48%), Gaps = 3/366 (0%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
A F + Q + ++ ++ L + + +I+ M +G +V T+ V+
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FE 198
+ +V EAV + M + N +N L+S LCK V +A E+ + +
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
PD+ T++ L++G N A E F EM S GC PD +Y +++D LC G++DEA+ +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+K M+ + C + Y+ L+ + N+ +A + F EME G+ + V YN LI CK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADT 377
+ + ++ +++ +M G P+ T N +++ G +A ++ + M CEPD T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
Y +I C+ +++A K+ + ++ K + H ++ +I GL + +A L EM+
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 438 EKGIRP 443
E+ P
Sbjct: 638 EQNEAP 643
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 207/442 (46%), Gaps = 15/442 (3%)
Query: 34 DLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRN 93
+LT + +SP AAL+ T V+ L R + +A R F A ++ N
Sbjct: 28 NLTPPSSTISFASPH---SAALSSTDVKLLDSL------RSQPDDSAALRLFNLASKKPN 78
Query: 94 YAHTVRAYHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVMRKYARAHKVDEAV 152
++ Y ++ L R + M I+ M++ + + TF I++ YA+ DE +
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 153 YTFNVM-DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEG 210
+ M D++ + + +N +L+ L +++ + M +PD+ T+++L++
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+ L A +M S G PD ++ ++ + G +D A+ + + M + C +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVL 329
+ +V+VH + E R+EDA++ EM + G D +N L+ CKA K+ ++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCER 388
M G P+ T N +IS L G A EV +MI + C P+ TY +I C+
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
N+++ A ++ + + SK +P + TF++LI GLC N A L EEM KG P T+
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 449 GKL-RQLLIKEKREDVLTFLHE 469
L L K K ++ L L +
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQ 460
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 182/417 (43%), Gaps = 41/417 (9%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
Q Y V Y+ +I L ++ + + +++ +M + N T+ ++ + ++V+
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPD-------- 200
EA V+ + ++ FN L+ LC +RN R A E+F+ M+ + EPD
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 201 ---------------------------LKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
+ TY+ L++G+ K +A E F EM G S
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
+ V+Y ++D LCK+ RV++A +++ M P + Y+ L+ + I+ A D
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
M G + D+V Y LI CKA + + ++L+ ++ G+ N +I L
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622
Query: 354 QGRTDRAFEVFRRMIKICE--PDADTYTMMIKMFCE-RNEMDMAMKIWKDMKSKRFVPSL 410
+ +T A +FR M++ E PDA +Y ++ + C + A+ ++ K FVP
Sbjct: 623 KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEF 682
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFL 467
+ L GL + + V L M+ + R S ++ LL K +D L L
Sbjct: 683 SSLYMLAEGLL-TLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATL 738
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 188/357 (52%), Gaps = 3/357 (0%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFN 156
V Y+ ++ + R + D++ KM + + +V T+ ++ R +D A+ F
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDP 215
M+ + ++ +N L+ LCK+ + M R P++ T+++LL+ + K+
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
L +A E ++EM++ G SP++++Y ++D C R+ EA ++ M N C P ++
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
L+ Y + R++D + F + ++G+ A+ V Y+ L+ FC++ K K + +EM S+
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMA 394
GV P+ T +++ L G+ ++A E+F + K + YT +I+ C+ +++ A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + K P++ T++ +I+GLC+ G+ +A +LL +M E G P+ T+ L
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 184/408 (45%), Gaps = 72/408 (17%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMR 140
A F+ R R V + ++AR +Q+ ++ D FC +
Sbjct: 72 AIALFQEMIRSRPLPSLVD-FSRFFSAIARTKQFNLVLD---------------FCKQLE 115
Query: 141 KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS-MKGRFEP 199
AH + YT N+M ++ C+ A + MK +EP
Sbjct: 116 LNGIAHNI----YTLNIM---------------INCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D T++ L++G + + +A MV GC PDVV+Y +V+ +C++G A++++
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
+ M++ N F YS ++ + + I+ AI F EME KGIK+ VV YN+L+ CKA
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI----------- 368
K+ + +LK+M S + PN T NV++ + +G+ A E+++ MI
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 369 -------------------------KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
C PD T+T +IK +C +D MK+++++
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ V + T+S L+ G CQ+G A L +EM+ G+ P +T+G L
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 183/372 (49%), Gaps = 18/372 (4%)
Query: 83 RFFEWAERQRNY---------------AHTVRAYHLMIESLARIRQYQIMWDIVTKMRNK 127
RFF R + + AH + ++MI R + + ++ K+
Sbjct: 93 RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL 152
Query: 128 GML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
G + TF +++ KV EAV + M + ++ +N +++ +C+S + A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 187 QEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
++ M+ R + D+ TYS +++ +D + A F+EM + G VV+Y +V
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
LCKAG+ ++ ++KDM +P ++VL+ + E ++++A + + EM +GI +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
++ YN L+ +C N+ +L M N +P+ T +I R D +VFR
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 366 RMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
+ K +A TY+++++ FC+ ++ +A +++++M S +P + T+ L++GLC NG
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 425 NAMKACVLLEEM 436
KA + E++
Sbjct: 453 KLEKALEIFEDL 464
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 176/360 (48%), Gaps = 10/360 (2%)
Query: 33 ADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGM---SAFRFFEWAE 89
+ + +++C+ ++L + G+++S ++++ AG A +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKV 148
R+ V ++++++ + + Q ++ +M +G+ N+ T+ +M Y +++
Sbjct: 292 RE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSIL 207
EA ++M + + ++ F L+ C + V ++F ++ R + TYSIL
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
++G+ + + A E F+EMVS G PDV++YGI++D LC G++++A+E+ +D+ +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
+Y+ ++ ++EDA + F + KG+K +V+ Y +I CK
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYTMMIKMF 385
+L++ME +G PN T N +I + + G + ++ M K C DA + M+I M
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDML 588
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 136/316 (43%), Gaps = 58/316 (18%)
Query: 92 RNYAHTVRAYHLMIESLA---RIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKV 148
R + + Y+ +++ R+ + M D++ +RNK ++ TF +++ Y +V
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--VRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSIL 207
D+ + F + K + N ++ L+ C+S ++ A+E+F M PD+ TY IL
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 208 LEGWGKDPNLPKARETFREMVSA-----------------------------------GC 232
L+G + L KA E F ++ + G
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
P+V++Y +M+ LCK G + EA +++ M+++ P Y+ L+ + + + +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 293 AFLEMERKGIKADV----VVYNALIGA-------FCKANKFKNVRRVLKEMESNGVTPNS 341
EM+ G AD +V + L+ A +C + K+ + +L+ S + +S
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSS 624
Query: 342 RT------CNVIISSL 351
T CN I +SL
Sbjct: 625 LTFVKMFPCNTITTSL 640
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 207/432 (47%), Gaps = 37/432 (8%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
+P + V+K+ +N FRF+E++ + N H+ Y+L+ SL + + + +
Sbjct: 68 NPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFE 127
Query: 123 KMRNKGM------------------------------LNVETFCIV----MRKYARAHKV 148
M++ G+ VE C+V + + +V
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRV 187
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSIL 207
++A+ F+ +++ + FN L+ LC KA E+ M G EPD+ TY+ L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 208 LEGWGKDPNLPKARETFREMVSAG-CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
++G+ K L KA E F+++ S CSPDVV+Y M+ CKAG++ EA ++ DM
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
PT+ ++VLV Y + A + +M G DVV + +LI +C+ +
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMF 385
R+ +EM + G+ PN+ T +++I++L ++ R +A E+ ++ K P Y +I F
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
C+ +++ A I ++M+ K+ P TF+ LI G C G +A + +M+ G P +
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 446 VTFGKLRQLLIK 457
+T L L+K
Sbjct: 488 ITVSSLLSCLLK 499
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V T+ ++ Y +A K+ EA + M + + FN L+ K+ + A+EI
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 191 DSMK--GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
M G F PD+ T++ L++G+ + + + + EM + G P+ +Y I+++ LC
Sbjct: 336 GKMISFGCF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
R+ +A E++ + + +P F+Y+ ++ + ++ +A EME+K K D +
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+ LI C + + +M + G +P+ T + ++S L+ G A+ +
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 207/432 (47%), Gaps = 37/432 (8%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
+P + V+K+ +N FRF+E++ + N H+ Y+L+ SL + + + +
Sbjct: 68 NPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFE 127
Query: 123 KMRNKGM------------------------------LNVETFCIV----MRKYARAHKV 148
M++ G+ VE C+V + + +V
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRV 187
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSIL 207
++A+ F+ +++ + FN L+ LC KA E+ M G EPD+ TY+ L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 208 LEGWGKDPNLPKARETFREMVSAG-CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
++G+ K L KA E F+++ S CSPDVV+Y M+ CKAG++ EA ++ DM
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
PT+ ++VLV Y + A + +M G DVV + +LI +C+ +
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMF 385
R+ +EM + G+ PN+ T +++I++L ++ R +A E+ ++ K P Y +I F
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
C+ +++ A I ++M+ K+ P TF+ LI G C G +A + +M+ G P +
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 446 VTFGKLRQLLIK 457
+T L L+K
Sbjct: 488 ITVSSLLSCLLK 499
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V T+ ++ Y +A K+ EA + M + + FN L+ K+ + A+EI
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 191 DSMK--GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
M G F PD+ T++ L++G+ + + + + EM + G P+ +Y I+++ LC
Sbjct: 336 GKMISFGCF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
R+ +A E++ + + +P F+Y+ ++ + ++ +A EME+K K D +
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+ LI C + + +M + G +P+ T + ++S L+ G A+ +
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 183/359 (50%), Gaps = 4/359 (1%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
++ + ++ ++A++ ++ ++ + +M+N G+ N+ T+ I + + R ++ A+
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ N LL+ C + +A + D M + ++PD T++ L+ G +
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A MV GC PD+V+YG +++ LCK G D A+ ++ M+ IY
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ ++ ++DA D F +ME KGIK DV YN LI C ++ + R+L +M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI--CEPDADTYTMMIKMFCERNEMD 392
+ P+ N +I + + +G+ A +++ M+K C PD Y +IK FC+ ++
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
M+++++M + V + T++ LI+G Q + A ++ ++M+ G+ P +T+ L
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 173/360 (48%), Gaps = 4/360 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y +I L + + + +++ KM + K +V + ++ + +D+A FN M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNL 217
+ + ++ +N L+S LC A + D ++ PDL ++ L++ + K+ L
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 218 PKARETFREMV-SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+A + + EMV S C PDVV+Y ++ CK RV+E +EV ++M + + Y+
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+H + ++A F +M G+ D++ YN L+ C + V + M+
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAM 395
+ + T +I +L G+ + +++F + +K +P+ TYT M+ FC + + A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
++ +MK +P+ T++ LI ++G+ + L++EM G TFG + +L
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 146/324 (45%), Gaps = 3/324 (0%)
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFE 198
RK + K+D+A+ F M K ++ F+ LLSA+ K + + M+
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
+L TYSI + + + L A +M+ G P +V+ +++ C R+ EAV +
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
V M + P + ++ LVH N+ +A+ M KG + D+V Y A+I CK
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADT 377
+ +L +ME + + N II L D AF++F +M K +PD T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
Y +I C A ++ DM K P L F+ALI+ + G ++A L +EM+
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 438 E-KGIRPSRVTFGKLRQLLIKEKR 460
+ K P V + L + K KR
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKR 371
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 163/378 (43%), Gaps = 58/378 (15%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
VT A +N R P+L N+L + E + A V Y+ +I+ L
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA---------------DVVIYNTIIDGL 260
Query: 109 ARIRQYQIMWDIVTKMRNKG------------------------------ML------NV 132
+ + +D+ KM KG ML ++
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 133 ETFCIVMRKYARAHKVDEA--VYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
F ++ + + K+ EA +Y V K+ P ++ A+N L+ CK + V + E+F
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M R + TY+ L+ G+ + + A+ F++MVS G PD+++Y I++D LC
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G V+ A+ V + M + Y+ ++ ++ED D F + KG+K +VV Y
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
++ FC+ + + EM+ +G PNS T N +I + + G + E+ + M +
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM-R 558
Query: 370 IC--EPDADTYTMMIKMF 385
C DA T+ ++ M
Sbjct: 559 SCGFAGDASTFGLVTNML 576
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+++DAI F +M + +V ++ L+ A K NKF V + ++M++ G++ N T +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 346 VIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+ I+ + + A + +M+K+ P T ++ FC N + A+ + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVL 464
+ P TF+ L++GL Q+ A +A L+E M+ KG +P VT+G + L K D+
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 465 TFLHEKI 471
L K+
Sbjct: 235 LNLLNKM 241
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++D+A+ + DM + P+ +S L+ N+ + I +M+ GI ++ Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
I FC+ ++ +L +M G P+ T N +++ R A + +M+++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 371 C-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
+PD T+T ++ + N+ A+ + + M K P L T+ A+INGLC+ G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 430 CVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
LL +M + I V + + L K K D
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 187/357 (52%), Gaps = 3/357 (0%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
++ ++A++ ++ ++ + +M+N G+ N T+ I++ + R ++ A+ M K
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKAR 221
N+ + LL+ C S+ + +A + D M ++P+ T++ L+ G +A
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
MV+ GC PD+V+YG++V+ LCK G D A ++ M+ P IY+ ++
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
++DA++ F EME KGI+ +VV Y++LI C ++ + R+L +M + P+
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T + +I + + +G+ A +++ M+K +P TY+ +I FC + +D A ++++
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
M SK P + T++ LI G C+ + + EM ++G+ + VT+ L Q L +
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 179/356 (50%), Gaps = 5/356 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML--NVETFCIVMRKYARAHKVDEAVYTFNV 157
Y +++ L + + ++++ KM +G L V + ++ + +D+A+ F
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPN 216
M+ + N+ ++ L+S LC A + D ++ + PD+ T+S L++ + K+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L +A + + EMV P +V+Y +++ C R+DEA ++ + M +C P Y+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+ + R+E+ ++ F EM ++G+ + V YN LI +A + + KEM S+G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAM 395
V PN T N ++ L G+ ++A VF + + EP TY +MI+ C+ +++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ ++ K P + ++ +I+G C+ G+ +A L +EM E G P+ + L
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 190/410 (46%), Gaps = 18/410 (4%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
VT +N R +L N+L + E Q V Y+ +I+ L
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKME---------------QGKLEPGVLIYNTIIDGL 266
Query: 109 ARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
+ + ++ +M KG+ NV T+ ++ + +A + M + ++ ++
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFRE 226
F+ L+ A K + +A++++D M R +P + TYS L+ G+ L +A++ F
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
MVS C PDVV+Y ++ CK RV+E +EV ++M + + Y++L+
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
+ A + F EM G+ +++ YN L+ CK K + V + ++ + + P T N+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+I + G+ + +++F + +K +PD Y MI FC + + A ++K+MK
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+P+ ++ LI ++G+ + L++EM G T G + +L
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 2/307 (0%)
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEP-DLKTYS 205
K+D+AV F M K ++ F+ LLSA+ K + + M+ P + TYS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
IL+ + + LP A +M+ G P++V+ +++ C + R+ EAV +V M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P + ++ L+H + N+ +A+ M KG + D+V Y ++ CK
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKM 384
+L +ME + P N II L D A +F+ M K P+ TY+ +I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
C A ++ DM ++ P + TFSALI+ + G ++A L +EM+++ I PS
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 445 RVTFGKL 451
VT+ L
Sbjct: 361 IVTYSSL 367
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 186 AQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
A +F M K R P + +S LL K +M + G + +Y I+++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
C+ ++ A+ V+ M P S L++ Y RI +A+ +M G +
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
+ V +N LI NK ++ M + G P+ T V+++ L +G TD AF +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 365 RRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
+M + EP Y +I C+ MD A+ ++K+M++K P++ T+S+LI+ LC
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 424 GNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
G A LL +MIE+ I P TF L +KE +
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 36/246 (14%)
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++D+AV + +M + P+ +S L+ N+ + I +M+ GI + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 311 ALIGAFCK-----------------------------ANKFKNVRRV------LKEMESN 335
LI FC+ N + + +R+ + +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMA 394
G PN+ T N +I L + A + RM+ K C+PD TY +++ C+R + D+A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+ M+ + P + ++ +I+GLC+ + A L +EM KGIRP+ VT+ L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 455 LIKEKR 460
L R
Sbjct: 301 LCNYGR 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 270 TSFIYSVLVHTYGV-ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
TS+ Y + G+ E +++DA+ F EM + ++ ++ L+ A K NKF V +
Sbjct: 44 TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 103
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCE 387
++M++ G+ N T +++I+ + + A V +M+K+ EP+ T + ++ +C
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ A+ + M + P+ TF+ LI+GL + A +A L++ M+ KG +P VT
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 448 FGKLRQLLIKEKREDVLTFLHEKINLLVKEP 478
+G + L K D+ L K+ EP
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 189/358 (52%), Gaps = 3/358 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
++ ++ ++ ++A++ +++++ + +M+ G+ ++ T+ I + + R ++ A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ + LL+ C S+ + A + D M + ++PD T++ L+ G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A +MV GC PD+V+YG +V+ LCK G +D A+ ++K M+ IY
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ ++ ++DA++ F EM+ KGI+ DV Y++LI C ++ + R+L +M
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDM 393
+ PN T + +I + + +G+ A +++ MIK +PD TY+ +I FC + +D
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A +++ M SK P++ T+S LI G C+ + L EM ++G+ + VT+ L
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 209/450 (46%), Gaps = 7/450 (1%)
Query: 8 RKKLLCKFVSFARMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPEL 66
R +L A+M+ G EP ++ L C S V L + + G +
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 67 VENVLKRF--ENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM 124
++ N A + QR + Y ++ L + + ++ KM
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 125 -RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
+ K +V + ++ + +D+A+ F MD + ++ ++ L+S LC
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 184 RKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
A + D ++ + P++ T+S L++ + K+ L +A + + EM+ PD+ +Y +
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
++ C R+DEA + + M +C P YS L+ + R+E+ ++ F EM ++G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
+ V Y LI F +A N + V K+M S GV PN T N+++ L G+ +A
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 363 VFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
VF + + EPD TY +MI+ C+ +++ +++ ++ K P++ ++ +I+G C
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ G+ +A LL++M E G P+ T+ L
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 194/410 (47%), Gaps = 18/410 (4%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
VT +N R +L ++LK+ E + A V Y+ +I+ L
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA---------------DVVIYNTIIDGL 268
Query: 109 ARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
+ + ++ T+M NKG+ +V T+ ++ + +A + M + ++ N+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFRE 226
F+ L+ A K + +A++++D M K +PD+ TYS L+ G+ L +A+ F
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
M+S C P+VV+Y ++ CKA RV+E +E+ ++M + + Y+ L+H +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
++A F +M G+ +++ YN L+ CK K V + ++ + + P+ T N+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+I + G+ + +E+F + +K P+ Y MI FC + + A + K MK
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+P+ T++ LI ++G+ + L++EM G T G + +L
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 2/280 (0%)
Query: 183 VRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
V A ++F D +K R P + ++ LL K +M + G S D+ +Y I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++ C+ ++ A+ V+ M P S L++ Y RI DA+ +M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
K D + LI NK ++ +M G P+ T +++ L +G D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 362 EVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
+ ++M K E D Y +I C+ MD A+ ++ +M +K P + T+S+LI+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
C G A LL +MIE+ I P+ VTF L +KE +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+++DA+D F +M + +V +N L+ A K NKF+ V + ++M++ G++ + T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 346 VIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+ I+ + + A V +M+K+ EPD T + ++ +C + A+ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVL 464
+ P TF+ LI+GL + A +A L+++M+++G +P VT+G + L K D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 465 TFLHEKI 471
L +K+
Sbjct: 243 LSLLKKM 249
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 188/358 (52%), Gaps = 3/358 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
++ ++ ++ ++A+++++ ++ + KM+ G+ N+ T+ I++ + R ++ A+
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ + LL+ C + + A + D M + + PD T++ L+ G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A MV GC P++V+YG++V+ LCK G +D A ++ M+ IY
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
S ++ + +DA++ F EME KG++ +V+ Y++LI C ++ + R+L +M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDM 393
+ PN T N +I + + +G+ A +++ MIK +PD TY+ +I FC + +D
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A +++ M SK P++ T++ LING C+ + L EM ++G+ + VT+ L
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 176/360 (48%), Gaps = 3/360 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
QR + Y +++ L + + ++++ KM + NV + V+ + D
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILL 208
+A+ F M+ V N+ ++ L+S LC A + D ++ + P++ T++ L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+ + K+ L +A + + EM+ PD+ +Y +++ C R+DEA + + M +C
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y+ L++ + RI++ ++ F EM ++G+ + V Y LI F +A N + V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE 387
K+M S+GV PN T N ++ L G+ ++A VF + + EP TY +MI+ C+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+++ ++ + K P + ++ +I+G C+ G +A L +M E G P T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 165/335 (49%), Gaps = 3/335 (0%)
Query: 120 IVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
+V +M +G N+ T+ +V+ + +D A N M+ ++ N+ ++ ++ +LC
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 179 KSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
K R+ A +F M+ + P++ TYS L+ A +M+ +P+VV
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
++ ++D K G++ EA ++ +M + P F YS L++ + + +R+++A F M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
K +VV YN LI FCKA + + +EM G+ N+ T +I
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 358 DRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
D A VF++M+ P+ TY ++ C+ +++ AM +++ ++ + P+++T++ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
I G+C+ G L + KG++P + + +
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 145/325 (44%), Gaps = 37/325 (11%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF 197
++R + K+D+A+ F M K ++ FN LLSA+ K + FD
Sbjct: 56 ILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK-------FD------ 102
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
L+ G+ +M G S ++ +Y I+++ C+ ++ A+
Sbjct: 103 ---------LVISLGE------------KMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
++ M P+ S L++ Y RI DA+ +M G + D + + LI
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPDA 375
NK ++ M G PN T V+++ L +G D AF + +M KI E +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-EANV 260
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
Y+ +I C+ D A+ ++ +M++K P++ T+S+LI+ LC A LL +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 436 MIEKGIRPSRVTFGKLRQLLIKEKR 460
MIE+ I P+ VTF L +KE +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGK 345
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 130/308 (42%), Gaps = 56/308 (18%)
Query: 192 SMKGRFEPDLKTYSILLEG---WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
+++G+ P + SI L G WG+ +RE++ G
Sbjct: 20 NLQGKGNPRIAPSSIDLCGMCYWGR--AFSSGSGDYREILRNGL---------------H 62
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
+ ++D+A+ + M + +P+ F ++ L+ + + I +M+R GI ++
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 309 YNALIGAFCK-----------------------------ANKFKNVRRV------LKEME 333
YN LI FC+ N + + +R+ + +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMD 392
G P++ T +I L + A + RM+ + C+P+ TY +++ C+R ++D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
+A + M++ + ++ +S +I+ LC+ + A L EM KG+RP+ +T+ L
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 453 QLLIKEKR 460
L +R
Sbjct: 303 SCLCNYER 310
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 179/351 (50%), Gaps = 3/351 (0%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
++ ++A+++++ ++ KM G+ N+ T+ I++ R ++ A+ M K
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKAR 221
++ N LL+ C + +A + D M + ++PD T++ L+ G + +A
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
MV GC PD+V+YG +++ LCK G D A+ ++ M+ IYS ++ +
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
++DA++ F EM+ KGI+ DV Y++LI C ++ + R+L +M + PN
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T N +I + +G+ A ++F MI + +P+ TY +I FC + +D A +I+
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
M SK +P + T++ LING C+ + L +M +G+ + VT+ L
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 198/410 (48%), Gaps = 18/410 (4%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
VT A +N R P+L N+L + E + A V Y +I+SL
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA---------------DVVIYSTVIDSL 250
Query: 109 ARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
+ R ++ T+M NKG+ +V T+ ++ + +A + M + ++ N+
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFRE 226
FN L+ A K + +A+++FD M R +P++ TY+ L+ G+ L +A++ F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
MVS C PDVV+Y +++ CKA +V + +E+ +DM + + Y+ L+H + +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
++A F +M G+ +++ YN L+ CK K + V + ++ + + P+ T N+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+ + G+ + +++F + +K +PD Y MI FC++ + A ++ MK
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+P T++ LI ++G+ + L++EM T+G + +L
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 185 KAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
+A ++F M K R P + +S LL K +M G S ++ +Y IM+
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
+ LC+ ++ A+ ++ M P+ + L++ + NRI +A+ +M G +
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
D V + L+ + NK +++ M G P+ T +I+ L +G D A +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 364 FRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+M K E D Y+ +I C+ +D A+ ++ +M +K P + T+S+LI+ LC
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 423 NGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
G A LL +M+E+ I P+ VTF L KE +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L +A + F EMV + P +V + ++ + K + D + + M+ + Y++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
+++ +++ A+ +M + G +V N+L+ FC N+ ++ +M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAM 395
P++ T ++ L + A + RM +K C+PD TY +I C+R E D+A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+ M+ + + +S +I+ LC+ + A L EM KGIRP T+ L L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 456 IKEKR 460
R
Sbjct: 286 CNYGR 290
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
++++A+D F EM + +V ++ L+ A K KF V ++ME GV+ N T N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 346 VIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
++I+ L + + A + +M+K+ P T ++ FC N + A+ + M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVL 464
+ P TF+ L++GL Q+ A +A L+E M+ KG +P VT+G + L K D+
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 465 TFLHEKI 471
L K+
Sbjct: 225 LNLLNKM 231
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 183/376 (48%), Gaps = 5/376 (1%)
Query: 81 AFRFFEWA-ERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLN-VETFCIV 138
A F+E+A +R+R + MI +L R + I I G N V F +
Sbjct: 215 AVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSAL 274
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR-NVRKAQEIFDSM-KGR 196
+ Y R+ +EA+ FN M +Y + NL +N ++ A K ++ + FD M +
Sbjct: 275 ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG 334
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+PD T++ LL + AR F EM + DV SY ++D +CK G++D A
Sbjct: 335 VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF 394
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
E++ M MP YS ++ + R ++A++ F EM GI D V YN L+ +
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDA 375
K + + +L+EM S G+ + T N ++ QG+ D +VF M + P+
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
TY+ +I + + AM+I+++ KS + +SALI+ LC+NG A L++E
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 436 MIEKGIRPSRVTFGKL 451
M ++GI P+ VT+ +
Sbjct: 575 MTKEGISPNVVTYNSI 590
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 161/368 (43%), Gaps = 57/368 (15%)
Query: 92 RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDE 150
R V +Y+ +++++ + Q + ++I+ +M K ++ NV ++ V+ +A+A + DE
Sbjct: 368 RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEG 210
A+ F M + + ++N LLS K V +++E D
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTK---VGRSEEALD------------------- 465
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
REM S G DVV+Y ++ K G+ DE +V +M + +P
Sbjct: 466 ------------ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
YS L+ Y ++A++ F E + G++ADVV+Y+ALI A CK + ++
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR---------RMIKICEPDADTYTMM 381
EM G++PN T N II + DR+ + + + E + + +
Sbjct: 574 EMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQL 633
Query: 382 IKMF-----------CERN--EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
CE E+ +++++ M P++ TFSA++N + +
Sbjct: 634 FGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693
Query: 429 ACVLLEEM 436
A +LLEE+
Sbjct: 694 ASMLLEEL 701
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 119/239 (49%), Gaps = 3/239 (1%)
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
M+ L + G+V A + + T + +S L+ YG E+AI F M+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 302 IKADVVVYNALIGAFCKAN-KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
++ ++V YNA+I A K +FK V + EM+ NGV P+ T N +++ G + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 361 FEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
+F M + E D +Y ++ C+ +MD+A +I M KR +P++ ++S +I+G
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHEKINLLVKE 477
+ G +A L EM GI RV++ L + K R E+ L L E ++ +K+
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 187/365 (51%), Gaps = 3/365 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
++ ++ ++ ++A+++++ ++ + KM+ G+ N+ T+ I++ + R ++ A+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ + LL+ C + + A + D M + + PD T++ L+ G
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A MV GC P++V+YG++V+ LCK G +D A ++ M+ I+
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ ++ + ++DA++ F EME KGI+ +VV Y++LI C ++ + ++L +M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDM 393
+ PN T N +I + + +G+ A ++ MIK +PD TY +I FC + +D
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A ++++ M SK P L T++ LI G C++ L EM +G+ VT+ L Q
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 454 LLIKE 458
L +
Sbjct: 369 GLFHD 373
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 180/364 (49%), Gaps = 3/364 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
QR + Y +++ L + + ++++ KM + +V F ++ + VD
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCK-SRNVRKAQEIFDSMKGRFEPDLKTYSILL 208
+A+ F M+ + N+ ++ L+S LC R +Q + D ++ + P+L T++ L+
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+ + K+ +A + +M+ PD+ +Y +++ C R+D+A ++ + M +C
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y+ L+ + R+ED + F EM +G+ D V Y LI N ++V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE 387
K+M S+GV P+ T ++++ L + G+ ++A EVF M K + D YT MI+ C+
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
++D ++ + K P++ T++ +I+GLC +A LL++M E G P T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 448 FGKL 451
+ L
Sbjct: 503 YNTL 506
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 2/328 (0%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM- 193
F ++ A+ K D + M + + NL +N L++ C+ + A + M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
K +EP + T S LL G+ + A +MV G PD +++ ++ L +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
EAV +V M C P Y V+V+ I+ A + +ME I+ADVV++N +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICE 372
+ CK + + KEME+ G+ PN T + +IS L S GR A ++ MI K
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVL 432
P+ T+ +I F + + A K+ DM + P + T+++LING C + KA +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 433 LEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
E M+ K P T+ L + K KR
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 177/391 (45%), Gaps = 18/391 (4%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
VT +N R +L N+L + E A + A V ++ +I+SL
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA---------------DVVIFNTIIDSL 195
Query: 109 ARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
+ R ++ +M KG+ NV T+ ++ + +A + M + ++ NL
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFRE 226
FN L+ A K +A+++ D M K +PD+ TY+ L+ G+ L KA++ F
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
MVS C PD+ +Y ++ CK+ RV++ E+ ++M + + Y+ L+ +
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
++A F +M G+ D++ Y+ L+ C K + V M+ + + +
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+I + G+ D +++F + +K +P+ TY MI C + + A + K MK
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
+P T++ LI ++G+ + L+ EM
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 193 MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
+K R P + ++ LL K +M G S ++ +Y I+++ C+ ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
A+ ++ M P+ S L++ Y RI DA+ +M G + D + + L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKI 370
I NK ++ M G PN T V+++ L +G D AF + +M KI
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 371 CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
E D + +I C+ +D A+ ++K+M++K P++ T+S+LI+ LC G A
Sbjct: 182 -EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 431 VLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
LL +MIEK I P+ VTF L +KE +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
+N L+ A K KF V + ++M+ G++ N T N++I+ + + A + +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 369 KIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
K+ EP T + ++ +C + A+ + M + P TF+ LI+GL + A
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 428 KACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDV 463
+A L++ M+++G +P+ VT+G + L K D+
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 189/391 (48%), Gaps = 6/391 (1%)
Query: 66 LVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTK 123
LV+ ++ + + G A + F + + R + +R +++ + ++ +W +
Sbjct: 172 LVDALMITYTDLGFIPDAIQCFRLSRKHR-FDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 124 MRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRN 182
+ + G LNV F I+M K+ + + +A F+ + K + + +FN L++ CK N
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 183 VRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
+ + + M K R PD+ TYS L+ K+ + A F EM G P+ V +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++ + G +D E + M P +Y+ LV+ + + A + M R+G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
++ D + Y LI FC+ + + KEM+ NG+ + + ++ + +GR A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 362 EVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
R M++ +PD TYTMM+ FC++ + K+ K+M+S VPS+ T++ L+NGL
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
C+ G A +LL+ M+ G+ P +T+ L
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 145/296 (48%), Gaps = 2/296 (0%)
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARE 222
P N+ FN L++ CK N+ AQ++FD + R +P + +++ L+ G+ K NL +
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
+M + PDV +Y +++ LCK ++D A + +M +P I++ L+H +
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
I+ +++ +M KG++ D+V+YN L+ FCK R ++ M G+ P+
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T +I G + A E+ + M + E D ++ ++ C+ + A + ++M
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
P T++ +++ C+ G+A LL+EM G PS VT+ L L K
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 39/312 (12%)
Query: 109 ARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLA 168
I Q ++D +TK + V +F ++ Y + +DE + M+K ++
Sbjct: 254 GNISDAQKVFDEITKRSLQP--TVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGR-------------------------------- 196
++ L++ALCK + A +FD M R
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 197 ----FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
+PD+ Y+ L+ G+ K+ +L AR M+ G PD ++Y ++D C+ G V
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
+ A+E+ K+MD N +S LV E R+ DA A EM R GIK D V Y +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-C 371
+ AFCK + ++LKEM+S+G P+ T NV+++ L G+ A + M+ I
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 372 EPDADTYTMMIK 383
PD TY +++
Sbjct: 552 VPDDITYNTLLE 563
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
+ E++ AG +V + I+++ CK G + +A +V ++ + PT ++ L++ Y
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
+++ +ME+ + DV Y+ALI A CK NK + EM G+ PN
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 344 CNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+I G D E +++M+ K +PD Y ++ FC+ ++ A I M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+ P T++ LI+G C+ G+ A + +EM + GI RV F L + KE R
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 5/352 (1%)
Query: 48 GVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIES 107
G + AL G+R VLK+ + G +A FF W +RQ + H Y M+ +
Sbjct: 315 GPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGN 373
Query: 108 LARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQN 166
L R +Q+ + ++ +M R+ N T+ ++ Y RA+ ++EA+ FN M + +
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 167 LAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFR 225
+ L+ K+ + A +++ M+ G PD TYS+++ GK +LP A + F
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
EMV GC+P++V+Y IM+D+ KA A+++ +DM + P YS+++ G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+E+A F EM++K D VY L+ + KA + + + M G+ PN TCN
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 346 VIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE-RNEMDMAM 395
++S+ + + A+E+ + M+ + P TYT+++ + R+++DM
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 148/336 (44%), Gaps = 15/336 (4%)
Query: 126 NKGMLNVETFCIVMRKYARAHKVDEAVYTFNV-MDKYEVPQNLAAFNGLLSALCKSRNVR 184
N G + VE V+R++ +EA+ + +D Y+ Q L N +AL
Sbjct: 297 NSGHI-VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL------- 348
Query: 185 KAQEIFDSMKGR--FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
F +K + F+ D TY+ ++ G+ + EMV GC P+ V+Y +
Sbjct: 349 ---GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
+ +A ++EA+ V M + C P Y L+ + ++ A+D + M+ G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
D Y+ +I KA ++ EM G TPN T N+++ A +
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 363 VFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
++R M EPD TY++++++ ++ A ++ +M+ K ++P + L++
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+ GN KA + M+ G+RP+ T L ++
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 285 NRIEDAIDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
N +A+ F ++R+ G K D Y ++G +A +F + ++L EM +G PN+ T
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
N +I S + A VF +M + C+PD TY +I + + +D+AM +++ M+
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
+ P T+S +IN L + G+ A L EM+++G P+ VT+ + L K +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 5/352 (1%)
Query: 48 GVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIES 107
G + AL G+R VLK+ + G +A FF W +RQ + H Y M+ +
Sbjct: 315 GPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGN 373
Query: 108 LARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQN 166
L R +Q+ + ++ +M R+ N T+ ++ Y RA+ ++EA+ FN M + +
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 167 LAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFR 225
+ L+ K+ + A +++ M+ G PD TYS+++ GK +LP A + F
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
EMV GC+P++V+Y IM+D+ KA A+++ +DM + P YS+++ G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+E+A F EM++K D VY L+ + KA + + + M G+ PN TCN
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 346 VIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE-RNEMDMAM 395
++S+ + + A+E+ + M+ + P TYT+++ + R+++DM
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 148/336 (44%), Gaps = 15/336 (4%)
Query: 126 NKGMLNVETFCIVMRKYARAHKVDEAVYTFNV-MDKYEVPQNLAAFNGLLSALCKSRNVR 184
N G + VE V+R++ +EA+ + +D Y+ Q L N +AL
Sbjct: 297 NSGHI-VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL------- 348
Query: 185 KAQEIFDSMKGR--FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
F +K + F+ D TY+ ++ G+ + EMV GC P+ V+Y +
Sbjct: 349 ---GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
+ +A ++EA+ V M + C P Y L+ + ++ A+D + M+ G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
D Y+ +I KA ++ EM G TPN T N+++ A +
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 363 VFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
++R M EPD TY++++++ ++ A ++ +M+ K ++P + L++
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+ GN KA + M+ G+RP+ T L ++
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 285 NRIEDAIDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
N +A+ F ++R+ G K D Y ++G +A +F + ++L EM +G PN+ T
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
N +I S + A VF +M + C+PD TY +I + + +D+AM +++ M+
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
+ P T+S +IN L + G+ A L EM+++G P+ VT+ + L K +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 5/352 (1%)
Query: 48 GVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIES 107
G + AL G+R VLK+ + G +A FF W +RQ + H Y M+ +
Sbjct: 315 GPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGN 373
Query: 108 LARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQN 166
L R +Q+ + ++ +M R+ N T+ ++ Y RA+ ++EA+ FN M + +
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 167 LAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFR 225
+ L+ K+ + A +++ M+ G PD TYS+++ GK +LP A + F
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
EMV GC+P++V+Y IM+D+ KA A+++ +DM + P YS+++ G
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+E+A F EM++K D VY L+ + KA + + + M G+ PN TCN
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCN 613
Query: 346 VIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE-RNEMDMAM 395
++S+ + + A+E+ + M+ + P TYT+++ + R+++DM
Sbjct: 614 SLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 148/336 (44%), Gaps = 15/336 (4%)
Query: 126 NKGMLNVETFCIVMRKYARAHKVDEAVYTFNV-MDKYEVPQNLAAFNGLLSALCKSRNVR 184
N G + VE V+R++ +EA+ + +D Y+ Q L N +AL
Sbjct: 297 NSGHI-VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL------- 348
Query: 185 KAQEIFDSMKGR--FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
F +K + F+ D TY+ ++ G+ + EMV GC P+ V+Y +
Sbjct: 349 ---GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
+ +A ++EA+ V M + C P Y L+ + ++ A+D + M+ G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
D Y+ +I KA ++ EM G TPN T N+++ A +
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 363 VFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
++R M EPD TY++++++ ++ A ++ +M+ K ++P + L++
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+ GN KA + M+ G+RP+ T L ++
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 285 NRIEDAIDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
N +A+ F ++R+ G K D Y ++G +A +F + ++L EM +G PN+ T
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
N +I S + A VF +M + C+PD TY +I + + +D+AM +++ M+
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
+ P T+S +IN L + G+ A L EM+++G P+ VT+ + L K +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKAR 518
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 200/408 (49%), Gaps = 11/408 (2%)
Query: 59 GVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYA--HTVRAYHLMIESLARIRQYQI 116
G S +L +V+ + G+ A R E R + + +V+ Y+ ++++L + Q+
Sbjct: 106 GFHCSEDLFISVISVYRQVGL-AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 117 MWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLS 175
++ + M+ G NV T+ ++++ + +KVD A M + ++ ++S
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 176 ALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
++C+ V++ +E+ + RFEP + Y+ L+ G K+ + A E REMV G SP+
Sbjct: 225 SMCEVGLVKEGRELAE----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL 295
V+SY ++++LC +G+++ A + M C P + S LV + DA+D +
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 296 EMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
+M R G++ +VV YN L+ FC V ME G +PN RT +I+ +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 355 GRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
G D A ++ +M+ C P+ YT M++ C ++ A + + M + PS+ TF
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKG-IRPSRVTFGKLRQLLIKEKR 460
+A I GLC G A + +M ++ P+ VT+ +L L K R
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 184/374 (49%), Gaps = 9/374 (2%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRK-YARAHKV 148
++ + V +Y +I L Q ++ + +T+M +G N+ T +++ + R
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSIL 207
D ++ + + N+ A+N L+ C N+ KA +F M+ P+++TY L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ G+ K +L A + +M+++GC P+VV Y MV+ LC+ + EA +++ M NC
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG-IKADVVVYNALIGAFCKANKFKNVR 326
P+ ++ + R++ A F +ME++ ++V YN L+ KAN+ +
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE-VFRRMIKICEPDADTYTMMIKMF 385
+ +E+ GV +S T N ++ + G A + V + M+ PD T M+I +
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 386 CERNEMDMAMKIWKDMKS---KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
C++ + + A ++ D+ S +++ P + +++ +I GLC++ +LLE MI GI
Sbjct: 574 CKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIV 632
Query: 443 PSRVTFGKLRQLLI 456
PS T+ L I
Sbjct: 633 PSIATWSVLINCFI 646
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 165/343 (48%), Gaps = 12/343 (3%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVM--DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
TF +++RK A +VD Y M + ++L F ++S + +A E+F
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAERAVEMFY 135
Query: 192 SMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
+K +P +K Y+ +L+ + + +R+M G P+V +Y +++ LCK
Sbjct: 136 RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
+VD A +++ +M + C P + Y+ ++ + +++ + ER + V VYN
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL---AER--FEPVVSVYN 250
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK- 369
ALI CK + +K +++EM G++PN + + +I+ L + G+ + AF +M+K
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 370 ICEPDADTYTMMIKMFCERNEMDMAMKIWKDM-KSKRFVPSLHTFSALINGLCQNGNAMK 428
C P+ T + ++K R A+ +W M + P++ ++ L+ G C +GN +K
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 429 ACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
A + M E G P+ T+G L K D ++ K+
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 146/320 (45%), Gaps = 4/320 (1%)
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
V + ++ + H A M + + N+ +++ L++ LC S + A
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 192 SMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSA-GCSPDVVSYGIMVDILCKA 249
M R P++ T S L++G A + + +M+ G P+VV+Y +V C
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G + +AV V M++ C P Y L++ + ++ A+ + +M G +VVVY
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
++ A C+ +KFK +++ M P+ T N I L GR D A +VFR+M +
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 370 I--CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
C P+ TY ++ + N ++ A + +++ + S T++ L++G C G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 428 KACVLLEEMIEKGIRPSRVT 447
A L+ +M+ G P +T
Sbjct: 546 IALQLVGKMMVDGKSPDEIT 565
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 126/258 (48%), Gaps = 8/258 (3%)
Query: 217 LPKARETFREMVSAGCSPDV-VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+P A F+ + ++ +++ +M+ L G+VD +++ M + ++
Sbjct: 56 VPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI 115
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
++ Y E A++ F ++ G V +YN ++ N+ + + V ++M+ +
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMA 394
G PN T NV++ +L + D A ++ M K C PDA +YT +I CE +
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
++ ++RF P + ++ALINGLC+ + A L+ EM+EKGI P+ +++ L +
Sbjct: 236 REL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 455 LIKEKR-EDVLTFLHEKI 471
L + E +FL + +
Sbjct: 291 LCNSGQIELAFSFLTQML 308
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 196/417 (47%), Gaps = 43/417 (10%)
Query: 85 FEWAERQRNYAHTVRAYH---LMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRK 141
FE +R Y + + A LMI L R + + +R K NV TF +V+
Sbjct: 173 FEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINA 232
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK---SRNVRKAQEIFDSM-KGRF 197
+ K+++A M Y N+ ++N L+ CK + + KA + M +
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
P+L T++IL++G+ KD NLP + + F+EM+ P+V+SY +++ LC G++ EA+
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+ M P Y+ L++ + + +++A+D F ++ +G +YN LI A+C
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADT 377
K K + + +EME G+ P+ T N +I+ L G + A ++F ++ PD T
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVT 472
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC------- 430
+ ++++ +C + E A + K+M P T++ ++ G C+ GN A
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 431 -----------------------------VLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
+LL EM+EKG+ P+R+T+ +++ ++ +
Sbjct: 533 KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQ 589
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 38/262 (14%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV ++ ++ K+ EA+ + M V NL +N L++ CK+ +++A ++F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 191 DSMKGR------------------------------------FEPDLKTYSILLEGWGKD 214
S+KG+ PD+ TY+ L+ G ++
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
N+ A++ F ++ S G PD+V++ I+++ C+ G +A ++K+M P Y
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 275 SVLVHTYGVENRIEDAIDAFLEMER-KGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
++++ Y E ++ A + +ME+ + ++ +V YN L+ + + K ++ +L EM
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 334 SNGVTPNSRTCNVIISSLISQG 355
G+ PN T ++ ++ QG
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQG 590
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M DN C+ S I +LV Y +R E +AF G K + L+ A K N+
Sbjct: 145 MCDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTM 380
+V V KEM + PN T NV+I++L G+ ++A +V M + C P+ +Y
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 381 MIKMFCE---RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
+I +C+ +M A + K+M P+L TF+ LI+G ++ N + + +EM+
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 438 EKGIRPSRVTFGKL 451
++ ++P+ +++ L
Sbjct: 324 DQDVKPNVISYNSL 337
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 20 RMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAG 78
+M+S G +P L CK M + + ++ G + + ++ + G
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 79 M--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFC 136
F E ER+ V Y+ +I L R + + ++ +KG+ ++ TF
Sbjct: 416 KIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFH 474
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG- 195
I+M Y R + +A M K + +N ++ CK N++ A + M+
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Query: 196 -RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE 254
R ++ +Y++LL+G+ + L A EM+ G P+ ++Y I+ + + G V +
Sbjct: 535 RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 188/376 (50%), Gaps = 4/376 (1%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVM 139
A F+ R R + + + +AR +QY ++ D+ +M KG+ N+ T I++
Sbjct: 56 AVDLFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFE 198
R K+ A + K + F+ L++ LC V +A E+ D M + +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P L T + L+ G + + A MV G P+ V+YG ++ ++CK+G+ A+E+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
++ M++ + YS+++ + +++A + F EME KG KAD+++Y LI FC
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADT 377
A ++ + ++L++M +TP+ + +I + +G+ A E+ + MI + PD T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
YT +I FC+ N++D A + M SK P++ TF+ LING C+ L +M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 438 EKGIRPSRVTFGKLRQ 453
+G+ VT+ L Q
Sbjct: 415 LRGVVADTVTYNTLIQ 430
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 181/355 (50%), Gaps = 3/355 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y +++ + + Q + +++ KM + + L+ + I++ + +D A FN M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 159 DKYEVPQNLAAFNGLLSALC-KSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNL 217
+ ++ + L+ C R A+ + D +K + PD+ +S L++ + K+ L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A E +EM+ G SPD V+Y ++D CK ++D+A ++ M C P +++L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
++ Y N I+D ++ F +M +G+ AD V YN LI FC+ K + + + +EM S V
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ + +++ L G ++A E+F ++ K E D Y ++I C +++D A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + K P + T++ +I GLC+ G+ +A +L +M E G P+ T+ L
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 202/423 (47%), Gaps = 7/423 (1%)
Query: 20 RMLSTGEPPPQ-EVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAG 78
RM+ G P + L +C S V L + +TG + + VLK +G
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 79 MSAF--RFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETF 135
+A E ++ V+ Y ++I+ L + +++ +M KG ++ +
Sbjct: 227 QTALAMELLRKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 136 CIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG 195
++R + A + D+ M K ++ ++ AF+ L+ K +R+A+E+ M
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 196 R-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE 254
R PD TY+ L++G+ K+ L KA MVS GC P++ ++ I+++ CKA +D+
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 255 AVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIG 314
+E+ + M + + Y+ L+ + ++E A + F EM + ++ D+V Y L+
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 315 AFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEP 373
C + + + +++E + + + N+II + + + D A+++F + +K +P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
D TY +MI C++ + A +++ M+ P+ T++ LI G+A K+ L+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 434 EEM 436
EE+
Sbjct: 586 EEI 588
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 157/301 (52%), Gaps = 5/301 (1%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
+R V A+ +I+ + + + ++ +M +G+ + T+ ++ + + +++D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
+A + ++M N+ FN L++ CK+ + E+F M R D TY+ L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+G+ + L A+E F+EMVS PD+VSY I++D LC G ++A+E+ + ++ +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
IY++++H ++++DA D F + KG+K DV YN +IG CK +
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYTMMIKMFC 386
++ME +G +PN T N++I + + +G ++ ++ IK C DA T M++ M
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE-IKRCGFSVDASTVKMVVDMLS 608
Query: 387 E 387
+
Sbjct: 609 D 609
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 2/318 (0%)
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYS 205
K D+AV F M + L F+ L S + +++ ++ M+ + +L T S
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
I++ + L A +++ G PD V++ +++ LC GRV EA+E+V M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
PT + LV+ + ++ DA+ M G + + V Y ++ CK+ +
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKM 384
+L++ME + ++ ++II L G D AF +F M IK + D YT +I+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
FC D K+ +DM ++ P + FSALI+ + G +A L +EMI++GI P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 445 RVTFGKLRQLLIKEKRED 462
VT+ L KE + D
Sbjct: 352 TVTYTSLIDGFCKENQLD 369
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
V+ + +DA+D F EM R + ++ ++ L + ++ V + K+ME G+ N
Sbjct: 49 VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T +++I+ + AF ++IK+ EPD T++ +I C + A+++ M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
P+L T +AL+NGLC NG A +L++ M+E G +P+ VT+G + +++ K
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 190/364 (52%), Gaps = 3/364 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVMRKYARAHKVDEAVYTF 155
++ ++ ++ ++A++ ++ ++ + +M+N + ++ ++ I++ + R ++ A+
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ + LL+ C + + +A + D M ++P+ T++ L+ G
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A MV+ GC PD+ +YG +V+ LCK G +D A+ ++K M+ IY
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ ++ + DA++ F EM+ KGI+ +VV YN+LI C ++ + R+L +M
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDM 393
+ PN T + +I + + +G+ A +++ MIK +PD TY+ +I FC + +D
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A +++ M SK P++ T++ LI G C+ + L EM ++G+ + VT+ L Q
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 454 LLIK 457
L +
Sbjct: 439 GLFQ 442
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 175/355 (49%), Gaps = 3/355 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y ++ L + + ++ KM + K +V + ++ V++A+ F M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNL 217
D + N+ +N L+ LC A + D ++ + P++ T+S L++ + K+ L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A + + EM+ PD+ +Y +++ C R+DEA + + M +C P Y+ L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ + R+E+ ++ F EM ++G+ + V YN LI +A +++ K+M S+GV
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ T ++++ L G+ ++A VF + K EPD TY +MI+ C+ +++
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + K P++ ++ +I+G C+ G +A L EM E G P+ T+ L
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 189/390 (48%), Gaps = 18/390 (4%)
Query: 50 TLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLA 109
T +N R +L ++LK+ E + A V Y +I++L
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA---------------DVVIYTTIIDALC 266
Query: 110 RIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLA 168
+ ++ T+M NKG+ NV T+ ++R + +A + M + ++ N+
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREM 227
F+ L+ A K + +A++++D M K +PD+ TYS L+ G+ L +A+ F M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 228 VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI 287
+S C P+VV+Y ++ CKA RV+E +E+ ++M + + Y+ L+
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
+ A F +M G+ D++ Y+ L+ CK K + V + ++ + + P+ T N++
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 348 ISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRF 406
I + G+ + +++F + +K +P+ YT MI FC + + A ++++MK
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 407 VPSLHTFSALINGLCQNGNAMKACVLLEEM 436
+P+ T++ LI ++G+ + L++EM
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 139/258 (53%), Gaps = 4/258 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ T+ ++ + ++DEA + F +M + N+ +N L+ CK++ V + E+F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M R + TY+ L++G + + A++ F++MVS G PD+++Y I++D LCK
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G++++A+ V + + + P + Y++++ ++ED D F + KG+K +V++Y
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+I FC+ + + +EM+ +G PNS T N +I + + G + E+ + M +
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM-R 597
Query: 370 ICE--PDADTYTMMIKMF 385
C DA T +M+I M
Sbjct: 598 SCGFVGDASTISMVINML 615
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
D L A + F EMV + P +V + ++ + K + D + + + M + +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y++L++ + +++ A+ +M + G + D+V ++L+ +C + ++ +M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMD 392
PN+ T N +I L + A + RM+ + C+PD TY ++ C+R ++D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
+A+ + K M+ + + ++ +I+ LC N A L EM KGIRP+ VT+ L
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 453 QLLIKEKR 460
+ L R
Sbjct: 298 RCLCNYGR 305
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 8/289 (2%)
Query: 180 SRNV------RKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
SRNV A ++F M + R P + ++ LL K M +
Sbjct: 52 SRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRI 111
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
S D+ SY I+++ C+ ++ A+ V+ M P S L++ Y RI +A+
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 293 AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLI 352
+M + + V +N LI NK ++ M + G P+ T +++ L
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 353 SQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLH 411
+G D A + ++M K E D YT +I C ++ A+ ++ +M +K P++
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
T+++LI LC G A LL +MIE+ I P+ VTF L +KE +
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 18/405 (4%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQ------- 115
+P V VL + AF+FF+W+ + + H+V +Y ++ L R Y
Sbjct: 107 APIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLK 166
Query: 116 ---------IMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQN 166
++D++ RN + F + ++EA+ F+ M ++ V
Sbjct: 167 EMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPK 226
Query: 167 LAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFR 225
+ NGLL K + F M G P + TY+I+++ K+ ++ AR F
Sbjct: 227 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 286
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
EM G PD V+Y M+D K GR+D+ V ++M D C P Y+ L++ +
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
++ ++ + EM+ G+K +VV Y+ L+ AFCK + + +M G+ PN T
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 346 VIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+I + G AF + M+++ E + TYT +I C+ M A +++ M +
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG 449
+P+L +++ALI+G + N +A LL E+ +GI+P + +G
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 169/358 (47%), Gaps = 4/358 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
V Y+ +I + + I + +M+ G+ NV ++ ++ + + + +A+ +
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDP 215
M + + N + L+ A CK N+ A + + M + E ++ TY+ L++G
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+ +A E F +M +AG P++ SY ++ KA +D A+E++ ++ P +Y
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
+ +IE A EM+ GIKA+ ++Y L+ A+ K+ +L EM+
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI--CEPDADTYTMMIKMFCERNEMDM 393
+ T V+I L +A + F R+ + +A +T MI C+ N+++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A +++ M K VP +++L++G + GN ++A L ++M E G++ + + L
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 182/459 (39%), Gaps = 109/459 (23%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
TV Y++MI+ + + + + +M+ +G++ + T+ ++ + + ++D+ V F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKD 214
M ++ +N L++ CK + E + MKG +P++ +YS L++ + K+
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 215 PNLPKA--------------------------------RETFR---EMVSAGCSPDVVSY 239
+ +A + FR EM+ G +VV+Y
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
++D LC A R+ EA E+ MD +P Y+ L+H + ++ A++ E++
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
+GIK D+++Y I C K + + V+ EM+ G+ NS ++ + G
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 360 AFEVFRRM---------IKIC----------------------------EPDADTYTMMI 382
+ M + C + +A +T MI
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVL---------- 432
C+ N+++ A +++ M K VP +++L++G + GN ++A L
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 433 -------------------------LEEMIEKGIRPSRV 446
LEEMI +GI P V
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y+ +I + + +++ +++ +G+ ++ + + K++ A N M
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNL 217
+ + N + L+ A KS N + + D MK E + T+ +L++G K+ +
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 218 PKARETFREMVSA-GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
KA + F + + G + + M+D LCK +V+ A + + M +P Y+
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+ + + +A+ +M G+K D++ Y +L+ N+ + R L+EM G
Sbjct: 654 LMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+ P+ C ++ G D A E+ ++K
Sbjct: 714 IHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 16/198 (8%)
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM---------------ESNGVTPNS 341
M R G K V Y + A + + VLKEM N P
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+ + S LI G + A + F +M + P + ++ F + + D + +KD
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
M P++ T++ +I+ +C+ G+ A L EEM +G+ P VT+ + K R
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 461 EDVLTFLHEKINLLVKEP 478
D E++ + EP
Sbjct: 313 LDDTVCFFEEMKDMCCEP 330
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 195/442 (44%), Gaps = 40/442 (9%)
Query: 61 RASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDI 120
R P+ + +++ + +N ++ F + + H YH ++ L+R R + + +
Sbjct: 46 RLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESL 105
Query: 121 VTKMRNKG---MLNVETFCIVMRKYARAHKVDEAVYTF---------------------- 155
+ +RN F ++R Y A + + ++ F
Sbjct: 106 MADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVL 165
Query: 156 --------------NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPD 200
N + + + N+ N L+ ALCK ++ A ++ D + P+
Sbjct: 166 IQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPN 225
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
L TY+ +L G+ ++ A+ EM+ G PD +Y +++D CK GR EA V+
Sbjct: 226 LVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMD 285
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
DM+ N P Y V++ E + +A + F EM + D + +I A C+ +
Sbjct: 286 DMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDH 345
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTM 380
K + ++M N P++ + +I L +GR A ++F K P TY
Sbjct: 346 KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNT 405
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+I CE+ E+ A ++W DM ++ P+ T++ LI GL +NGN + +LEEM+E G
Sbjct: 406 LIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 441 IRPSRVTFGKLRQLLIKEKRED 462
P++ TF L + L K +E+
Sbjct: 466 CFPNKTTFLILFEGLQKLGKEE 487
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 134/284 (47%), Gaps = 5/284 (1%)
Query: 120 IVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
++ +M ++G + T+ ++M Y + + EA + M+K E+ N + ++ ALC
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 179 KSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
K + +A+ +FD M R F PD +++ +D + +A +R+M+ C PD
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
++ LCK GRV EA ++ + + + +P+ Y+ L+ + + +A + +M
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
+ K + YN LI K K RVL+EM G PN T ++ L G+
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 358 DRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
+ A ++ + + D +++ + +K F E+D + K++
Sbjct: 487 EDAMKIVSMAVMNGKVDKESWELFLKKFA--GELDKGVLPLKEL 528
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVM 158
Y +MI +L + ++ ++ +M + + + C V+ HKVDEA + M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLP 218
K + A + L+ LCK V +A+++FD + P L TY+ L+ G + L
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+A + +M C P+ +Y ++++ L K G V E V V+++M + C P + +L
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 279 HTYGVENRIEDAI 291
+ EDA+
Sbjct: 478 EGLQKLGKEEDAM 490
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 183/360 (50%), Gaps = 6/360 (1%)
Query: 92 RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDE 150
RN +T ++++I Q + I+ KM G + T ++ + R ++V +
Sbjct: 117 RNDLYT---FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLE 209
AV + M + ++ A+N ++ +LCK++ V A + F ++ + P++ TY+ L+
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
G A +M+ +P+V++Y ++D K G+V EA E+ ++M + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
YS L++ + +RI++A F M KG ADVV YN LI FCKA + ++ ++
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCER 388
+EM G+ N+ T N +I G D+A E F +M PD TY +++ C+
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
E++ A+ I++DM+ + + T++ +I G+C+ G +A L + KG++P VT+
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 162/314 (51%), Gaps = 4/314 (1%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGR 196
++ + +V++A F +++ + N+ + L++ LC S A + D +K +
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
P++ TYS LL+ + K+ + +A+E F EMV PD+V+Y +++ LC R+DEA
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
++ M C+ Y+ L++ + R+ED + F EM ++G+ ++ V YN LI F
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD 376
+A + +M+ G++P+ T N+++ L G ++A +F M K E D D
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLD 434
Query: 377 --TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
TYT +I+ C+ +++ A ++ + K P + T++ +++GLC G + L
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Query: 435 EMIEKGIRPSRVTF 448
+M ++G+ + T
Sbjct: 495 KMKQEGLMKNDCTL 508
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 163/316 (51%), Gaps = 10/316 (3%)
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE----- 198
R K+++A+ F+ M K ++ FN LLSA+ K K ++ S+ + E
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVK----LKKYDVVISLGKKMEVLGIR 117
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
DL T++I++ + + A +M+ G PD V+ G +V+ C+ RV +AV +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
V M + P Y+ ++ + R+ DA D F E+ERKGI+ +VV Y AL+ C
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADT 377
++++ + R+L +M +TPN T + ++ + + G+ A E+F M+++ +PD T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
Y+ +I C + +D A +++ M SK + + +++ LING C+ L EM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 438 EKGIRPSRVTFGKLRQ 453
++G+ + VT+ L Q
Sbjct: 358 QRGLVSNTVTYNTLIQ 373
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 176/355 (49%), Gaps = 11/355 (3%)
Query: 93 NYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEA 151
Y + AY+ +I+SL + ++ +D ++ KG+ NV T+ ++ + + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 152 VYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEG 210
+ M K ++ N+ ++ LL A K+ V +A+E+F+ M + +PD+ TYS L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+ +A + F MVS GC DVVSY +++ CKA RV++ +++ ++M +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
+ Y+ L+ + ++ A + F +M+ GI D+ YN L+G C + + + +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERN 389
+M+ + + T +I + G+ + A+ +F + +K +PD TYT M+ C +
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+ ++ MK + + + T S +G+ + L+++M+ G PS
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPS 531
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 150/316 (47%), Gaps = 2/316 (0%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGR 196
++ + K D + M+ + +L FN +++ C V A I M K
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 150
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+EPD T L+ G+ + + A +MV G PD+V+Y ++D LCK RV++A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ K+++ P Y+ LV+ +R DA +M +K I +V+ Y+AL+ AF
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDA 375
K K + + +EM + P+ T + +I+ L R D A ++F M+ K C D
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
+Y +I FC+ ++ MK++++M + V + T++ LI G Q G+ KA +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 436 MIEKGIRPSRVTFGKL 451
M GI P T+ L
Sbjct: 391 MDFFGISPDIWTYNIL 406
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
+D L A + F +MV + P +V + ++ + K + D + + K M+ +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
++++++ + ++ A+ +M + G + D V +L+ FC+ N+ + ++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEM 391
G P+ N II SL R + AF+ F+ + K P+ TYT ++ C +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A ++ DM K+ P++ T+SAL++ +NG ++A L EEM+ I P VT+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 452 RQLLIKEKRED 462
L R D
Sbjct: 302 INGLCLHDRID 312
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 3/362 (0%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKV 148
R ++++ Y++MI SL + + ++ ++ + V T+ I++ V
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSIL 207
DEA+ + M + ++ +N ++ +CK V +A E+ +++ + EPD+ +Y+IL
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
L + + +M S C P+VV+Y I++ LC+ G+++EA+ ++K M +
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P ++ Y L+ + E R++ AI+ M G D+V YN ++ CK K
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE-VFRRMIKICEPDADTYTMMIKMFC 386
+ ++ G +PNS + N + S+L S G RA + M +PD TY MI C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+D A ++ DM+S F PS+ T++ ++ G C+ A +LE M+ G RP+
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 447 TF 448
T+
Sbjct: 545 TY 546
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 160/326 (49%), Gaps = 1/326 (0%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF 197
+ + R+ E+++ M + ++ L+ RN+ KA + + ++
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
+PD+ Y+ L+ G+ K + A M S SPD V+Y IM+ LC G++D A++
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
V+ + +NC PT Y++L+ +E +++A+ EM +G+K D+ YN +I C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDAD 376
K +++ +E G P+ + N+++ +L++QG+ + ++ +M + C+P+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
TY+++I C +++ AM + K MK K P +++ LI C+ G A LE M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 437 IEKGIRPSRVTFGKLRQLLIKEKRED 462
I G P V + + L K + D
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKAD 420
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 174/356 (48%), Gaps = 8/356 (2%)
Query: 128 GMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQ 187
G +V + ++ + + +++D+A + M + + +N ++ +LC + A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 188 EIFDS-MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDIL 246
++ + + +P + TY+IL+E + + +A + EM+S G PD+ +Y ++ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 247 CKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
CK G VD A E+V++++ C P Y++L+ + + E+ +M + +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
V Y+ LI C+ K + +LK M+ G+TP++ + + +I++ +GR D A E
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 367 MIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
MI C PD Y ++ C+ + D A++I+ + P+ +++ + + L +G+
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKEPLCD 481
++A ++ EM+ GI P +T+ + L +E D E LLV C+
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD------EAFELLVDMRSCE 503
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 134/275 (48%), Gaps = 2/275 (0%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFN 156
V +Y++++ +L +++ ++TKM K NV T+ I++ R K++EA+
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDP 215
+M + + + +++ L++A C+ + A E ++M PD+ Y+ +L K+
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+A E F ++ GCSP+ SY M L +G A+ ++ +M N P Y+
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
++ E +++A + ++M VV YN ++ FCKA++ ++ VL+ M N
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
G PN T V+I + G A E+ +++I
Sbjct: 538 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 199/406 (49%), Gaps = 10/406 (2%)
Query: 62 ASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL---ARIRQYQIMW 118
+S E V LK F + S+F +F+ N HT + M+E+L ++ + ++
Sbjct: 83 SSSEEVTRGLKSFPDTD-SSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVF 141
Query: 119 DIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
D++ K K + T+ + + + + +A Y M ++ N ++NGL+ L
Sbjct: 142 DLMQKRIIK--RDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 179 KSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
KSR +A E++ M +G F P L+TYS L+ G GK ++ +EM + G P+V
Sbjct: 200 KSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV 258
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
++ I + +L +AG+++EA E++K MDD C P Y+VL+ +++ A + F +
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M+ K D V Y L+ F +V++ EME +G P+ T +++ +L G
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 357 TDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
AF+ M + P+ TY +I + +D A++++ +M+S P+ +T+
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
I+ ++G+++ A E+M KGI P+ V L K R+
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 191/399 (47%), Gaps = 38/399 (9%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
+++ Y ++ L + R + ++ +M G+ NV TF I +R RA K++EA
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTY---------- 204
MD ++ + L+ ALC +R + A+E+F+ MK GR +PD TY
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 205 -------------------------SILLEGWGKDPNLPKARETFREMVSAGCSPDVVSY 239
+IL++ K N +A +T M G P++ +Y
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
++ L + R+D+A+E+ +M+ PT++ Y V + YG A++ F +M+
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
KGI ++V NA + + KA + + +++ ++ G+ P+S T N+++ G D
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 360 AFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
A ++ M++ CEPD +I + + +D A K++ MK + P++ T++ L+
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
GL +NG +A L E M++KG P+ +TF L L K
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 167/344 (48%), Gaps = 5/344 (1%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIV 138
A FE + + Y+L+I L +I D+ ++++ G + +V T+ +
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGR- 196
+ Y ++ K+DE + M +E N N ++S L K+ NV A +++ D M R
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
F P TY L++G K L +A++ F M+ GC P+ Y I+++ KAG D A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ K M P YSVLV + R+++ + F E++ G+ DVV YN +I
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 317 CKANKFKNVRRVLKEME-SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPD 374
K+++ + + EM+ S G+TP+ T N +I +L G + A +++ + + EP+
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
T+ +I+ + + + A +++ M + F P+ T+ L N
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 138/279 (49%), Gaps = 5/279 (1%)
Query: 178 CKSRNVRKAQEIFDSMKGRF--EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
CK NV A+ +F+ +P L TY++L+ G + + A++ F ++ S GC PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL 295
V +Y ++D K+G++DE E+ K+M + C + +++++ ++DA+D +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 296 E-MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
+ M + Y LI K+ + +++ + M G PN N++I+
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 355 GRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
G D A +F+RM+K PD TY++++ C +D + +K++K P + +
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 414 SALINGLCQNGNAMKACVLLEEM-IEKGIRPSRVTFGKL 451
+ +INGL ++ +A VL EM +GI P T+ L
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 214/462 (46%), Gaps = 65/462 (14%)
Query: 57 QTGVRASPELVE--NVLKRF-ENAGMSAFRFFEWAERQRN-YAHTVRAYHLMIESLARIR 112
+TG R P+ V +L RF +N + + + F W+E +++ + V + +++++L +
Sbjct: 320 KTG-RHKPDRVTYITLLDRFSDNRDLDSVKQF-WSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 113 QYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAV---------------YTFN 156
+ +D + MR++G+L N+ T+ ++ R H++D+A+ YT+
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 157 VMDKY--------------------EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG- 195
V Y + N+ A N L +L K+ R+A++IF +K
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
PD TY+++++ + K + +A + EM+ GC PDV+ +++ L KA RVDEA
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
++ M + PT Y+ L+ G +I++AI+ F M +KG + + +N L
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDA 375
CK ++ ++L +M G P+ T N II L+ G+ A F +M K+ PD
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF 677
Query: 376 DTYTMMIKMFCERNEMDMAMKI----------------WKDM----KSKRFVPSLHTFSA 415
T ++ + + ++ A KI W+D+ ++ + + +FS
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 416 --LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+ NG+C++G+++ ++ + +R F K + L
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 148/328 (45%), Gaps = 39/328 (11%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKAR 221
V L +N L+ L ++ + AQ++F +K PD+ TY+ LL+ +GK + +
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 222 ETFREMVSAGC------------------------------------SPDVVSYGIMVDI 245
E ++EM + C SP +YG ++D
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
L K+GR+ EA ++ + M D C P IY++L++ +G + A F M ++G++ D
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
+ Y+ L+ C + KE++ +G+ P+ N+II+ L R + A +F
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 366 RM--IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
M + PD TY +I ++ A KI+ +++ P++ TF+ALI G +
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 424 GNAMKACVLLEEMIEKGIRPSRVTFGKL 451
G A + + M+ G P+ T+ +L
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
N +L AL + + +FD M+ R + D TY + + L +A R+M
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
G + SY ++ +L K+ EA+EV + M P+ YS L+ G I+
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
+ EME G+K +V + I +A K +LK M+ G P+ T V+I
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 350 SLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
+L + + D A EVF +M +PD TY ++ F + ++D + W +M+ VP
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+ TF+ L++ LC+ GN +A L+ M ++GI P+ T+ L L++ R D
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 213 KDPNLPKARETFREMV-SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
K N+ AR F + G P + +Y +++ L +A ++ A +V + C+P
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
Y+ L+ YG +I++ + + EM +A+ + +N +I KA + + +
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 332 MESN-GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERN 389
+ S+ +P + T +I L GR A ++F M+ C P+ Y ++I F +
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG 449
E D A ++K M + P L T+S L++ LC G + +E+ E G+ P V +
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 450 KLRQLLIKEKR-EDVLTFLHE 469
+ L K R E+ L +E
Sbjct: 1001 LIINGLGKSHRLEEALVLFNE 1021
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 2/262 (0%)
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN-NCMPTSFIYSVL 277
K+ + M+ PD+ S + L D + K + N N + T+ + +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ V+ ++E+ F M+++ IK D Y + + K L++M G
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMK 396
N+ + N +I L+ A EV+RRMI + P TY+ ++ +R ++D M
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLI 456
+ K+M++ P+++TF+ I L + G +A +L+ M ++G P VT+ L L
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 457 KEKREDVLTFLHEKINLLVKEP 478
++ D + EK+ +P
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKP 326
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 188/365 (51%), Gaps = 3/365 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLN-VETFCIVMRKYARAHKVDEAVYTF 155
++ ++ ++ ++A+++++ ++ + KM+ +++ + T+ I++ + R ++ A+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M K ++ + LL+ C + + A + D M + + PD T++ L+ G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A MV GC P++V+YG++V+ LCK G D A+ ++ M+ I+
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ ++ + ++DA++ F EME KGI+ +VV Y++LI C ++ + ++L +M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDM 393
+ PN T N +I + + +G+ A +++ MIK +PD TY ++ FC + +D
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A ++++ M SK P + T++ LI G C++ L EM +G+ VT+ L Q
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 454 LLIKE 458
L +
Sbjct: 444 GLFHD 448
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 181/364 (49%), Gaps = 3/364 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
QR + Y +++ L + + +++ KM + +V F ++ + VD
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCK-SRNVRKAQEIFDSMKGRFEPDLKTYSILL 208
+A+ F M+ + N+ ++ L+S LC R +Q + D ++ + P+L T++ L+
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+ + K+ +A + + +M+ PD+ +Y +V+ C R+D+A ++ + M +C
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y+ L+ + R+ED + F EM +G+ D V Y LI N ++V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE 387
K+M S+GV P+ T ++++ L + G+ ++A EVF M K + D YT MI+ C+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
++D ++ + K P++ T++ +I+GLC +A LL++M E G P+ T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 448 FGKL 451
+ L
Sbjct: 578 YNTL 581
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 161/339 (47%), Gaps = 2/339 (0%)
Query: 124 MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
++++ + ++ F ++ A+ K D + M + E+ L +N L++ C+ +
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQI 136
Query: 184 RKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
A + M K +EP + T S LL G+ + A +MV G PD +++ +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
+ L + EAV +V M C P Y V+V+ + A++ +ME I
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
+ADVV++N +I + CK + + KEME+ G+ PN T + +IS L S GR A +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 363 VFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
+ MI K P+ T+ +I F + + A K++ DM + P + T+++L+NG C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+ KA + E M+ K P VT+ L + K KR
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 180/391 (46%), Gaps = 18/391 (4%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
VT +N R +L N+L + E A + A V ++ +I+SL
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA---------------DVVIFNTIIDSL 270
Query: 109 ARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
+ R ++ +M KG+ NV T+ ++ + +A + M + ++ NL
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFRE 226
FN L+ A K +A++++D M K +PD+ TY+ L+ G+ L KA++ F
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
MVS C PDVV+Y ++ CK+ RV++ E+ ++M + + Y+ L+ +
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
++A F +M G+ D++ Y+ L+ C K + V M+ + + +
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+I + G+ D +++F + +K +P+ TY MI C + + A + K MK
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
+P+ T++ LI ++G+ + L+ EM
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 131/258 (50%), Gaps = 4/258 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ T+ ++ + ++D+A F M + ++ +N L+ CKS+ V E+F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M R D TY+ L++G D + A++ F++MVS G PD+++Y I++D LC
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G++++A+EV M + +IY+ ++ +++D D F + KG+K +VV Y
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
N +I C + +LK+M+ +G PNS T N +I + + G + E+ R M +
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM-R 602
Query: 370 ICE--PDADTYTMMIKMF 385
C DA T ++ M
Sbjct: 603 SCRFVGDASTIGLVANML 620
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 56/308 (18%)
Query: 192 SMKGRFEPDLKTYSILLEG---WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
+++G+ P + SI L G WG+ +RE++ G + D+
Sbjct: 20 NLQGKGNPRIAPSSIDLCGMCYWGR--AFSSGSGDYREILRNG----------LHDM--- 64
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
++D+A+ + M + +P+ ++ L+ + + I +M+R I +
Sbjct: 65 --KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT 122
Query: 309 YNALIGAFCK-----------------------------ANKFKNVRRV------LKEME 333
YN LI FC+ N + + +R+ + +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMD 392
G P++ T +I L + A + RM+ + C+P+ TY +++ C+R + D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
+A+ + M++ + + F+ +I+ LC+ + A L +EM KGIRP+ VT+ L
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 453 QLLIKEKR 460
L R
Sbjct: 303 SCLCSYGR 310
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 198/405 (48%), Gaps = 20/405 (4%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNV-ETFCIVM 139
A +FF WA+RQ Y H Y+ M+E L++ + Q ++ M+ +G+ E F VM
Sbjct: 190 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVM 249
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFE 198
Y+RA ++ +A+ +M + V NL N + ++ + KA + M+
Sbjct: 250 VSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIV 309
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P++ TY+ ++ G+ + +A E +M S GC PD VSY ++ LCK R+ E ++
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 259 VKDM-DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+K M ++ +P Y+ L+H + ++A+ + + KG + D + Y+A++ A C
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 318 KANKFKNVRRVLKEMESNG-VTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDA 375
K + + ++ EM S G P+ T +++ G D+A ++ + M +P+
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNT 489
Query: 376 DTYTMMIKMFCE-------RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
+YT ++ C R M+M+ + W + P+ T+S +++GL + G +
Sbjct: 490 VSYTALLNGMCRTGKSLEAREMMNMSEEHW-------WSPNSITYSVIMHGLRREGKLSE 542
Query: 429 ACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHEKIN 472
AC ++ EM+ KG P V L Q L ++ R + F+ E +N
Sbjct: 543 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 165/345 (47%), Gaps = 5/345 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKM-RNKGMLNVE-TFCIVMRKYARAHKVDEAVYTFNV 157
+Y+ ++ L + ++ + D++ KM + G++ + T+ ++ + DEA++
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD 408
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDP 215
+ + ++ ++ ALCK + +A+++ + M KG PD+ TY+ ++ G+ +
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+ KA++ + M + G P+ VSY +++ +C+ G+ EA E++ +++ P S YS
Sbjct: 469 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS 528
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
V++H E ++ +A D EM KG V N L+ + C+ + R+ ++E +
Sbjct: 529 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMA 394
G N +I D A V M I + D TYT ++ ++ + A
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEA 648
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
++ K M K P+ T+ +I+ CQ G +LE+MI +
Sbjct: 649 TELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETF 224
N+ F ++ C++ + A + D M D+ TY+ L++ GK + +A E
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
++M+ G P V+Y ++ C+ G+VD+ V +++ M T IY+ ++ V
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT--IYNQVIEKLCVL 710
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
++E+A ++ R ++D AL+ + K + +V M + + P+ + C
Sbjct: 711 GKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMC 770
Query: 345 NVIISSLISQGRTDRAFEVFRRMIK 369
+ L+ +G+ D A ++ R+++
Sbjct: 771 EKLSKRLVLKGKVDEADKLMLRLVE 795
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 208/423 (49%), Gaps = 43/423 (10%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
S ++ +V+K N + FRFF WA R+ + ++ L+I+ L+ + W +
Sbjct: 59 SKNIITSVIKDEVNRQL-GFRFFIWASRRER-LRSRESFGLVIDMLSEDNGCDLYWQTLE 116
Query: 123 KMRNKGM-LNVETFCIVMRKYARAHKVDEA---------------VYTFNV--------- 157
++++ G+ ++ FC+++ YA+ ++A V+T+NV
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREE 176
Query: 158 ------------MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTY 204
M K NL F L+ L K AQ++FD M GR P+ TY
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 205 SILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDD 264
+IL+ G + + AR+ F EM ++G PD V++ ++D CK GR+ EA E+++ +
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 265 NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN 324
+ + YS L+ R A + + M +K IK D+++Y LI KA K ++
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 325 VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIK 383
++L M S G++P++ N +I +L +G + + M + PDA T+T++I
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 384 MFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRP 443
C + A +I+ +++ PS+ TF+ALI+GLC++G +A +LL +M E G RP
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG-RP 474
Query: 444 SRV 446
+ +
Sbjct: 475 ASL 477
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGR 196
++ + + ++ EA + +K L ++ L+ L ++R +A E++ +M K
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+PD+ Y+IL++G K + A + M S G SPD Y ++ LC G ++E
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ +M + P + +++L+ + + +A + F E+E+ G V +NALI
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 317 CKANKFKNVRRVLKEME----SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-C 371
CK+ + K R +L +ME ++ S + N +++ G +A+
Sbjct: 454 CKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGS 513
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
PD +Y ++I FC ++D A+K+ ++ K P T++ LINGL + G +A
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 192/416 (46%), Gaps = 31/416 (7%)
Query: 82 FRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMR 140
R FE + + +R Y +I+ L R R+Y +++ M K + ++ + I+++
Sbjct: 291 LRLFE----KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQ 346
Query: 141 KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI-FDSMKGRFEP 199
++A K+++A+ + M + + +N ++ ALC + + + + + + P
Sbjct: 347 GLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D T++IL+ ++ + +A E F E+ +GCSP V ++ ++D LCK+G + EA ++
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 260 KDMDDNNCMPTSFIYSVLVHT--YGVENRIEDA--IDAFLEMER---KGIKADVVVYNAL 312
M+ P S ++ L H+ + +E + A+ ++ G D+V YN L
Sbjct: 467 HKMEVGR--PAS-LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVL 523
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE 372
I FC+A ++L ++ G++P+S T N +I+ L GR + AF++F
Sbjct: 524 INGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH 583
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA-LINGLCQNGNAMKACV 431
A Y ++ C + ++ +A +W MK + + L +A I + G +A
Sbjct: 584 SPA-VYRSLMTWSCRKRKVLVAFNLW--MKYLKKISCLDDETANEIEQCFKEGETERA-- 638
Query: 432 LLEEMIEKGIRPSRVTFGKLRQLLIKEKRED-------VLTFLHEKINLLVKEPLC 480
L +IE R +T G LI + V + L EK +LV P C
Sbjct: 639 -LRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREK-KILVTPPSC 692
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 167/337 (49%), Gaps = 4/337 (1%)
Query: 110 RIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAA 169
R+ M+D + M K NV + ++ ++ +VD A+ N M+K + ++
Sbjct: 166 RVYDALYMFDQMVGMGYKP--NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
+N L+S LC S A + M R PD+ T++ L++ K+ + +A E + EM+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
PD+V+Y +++ LC R+DEA E+ M C P YS+L++ Y ++E
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+ F EM ++G+ + V Y LI +C+A K + + M GV PN T NV++
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 349 SSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
L G+ ++A + M K + D TY ++I+ C+ E+ A I+ + + +
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
P + T++ ++ GL + G +A L +M E GI P+
Sbjct: 464 PDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 6/379 (1%)
Query: 85 FEWAERQR-NYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKY 142
+ W + Q H + ++++ R Q + + KM G ++ TF ++ +
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 143 ARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDL 201
R +V +A+Y F+ M N+ +N ++ LCKS+ V A ++ + M K PD+
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
TY+ L+ G A M PDV ++ ++D K GRV EA E ++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M + P YS+L++ + +R+++A + F M KG DVV Y+ LI +CK+ K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYT 379
++ ++ EM GV N+ T ++I G+ + A E+FRRM+ C P+ TY
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV-FCGVHPNIITYN 400
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
+++ C+ +++ A+ I DM+ + T++ +I G+C+ G A + + +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 440 GIRPSRVTFGKLRQLLIKE 458
G+ P T+ + L K+
Sbjct: 461 GLMPDIWTYTTMMLGLYKK 479
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 3/342 (0%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ F ++ ++ K D +Y + M +P NL N LL+ C+ + A
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 191 DSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M K EP + T+ LL G+ + + A F +MV G P+VV Y ++D LCK+
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
+VD A++++ M+ + P Y+ L+ R DA M ++ I DV +
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI- 368
NALI A K + +EM + P+ T +++I L R D A E+F M+
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 369 KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
K C PD TY+++I +C+ +++ MK++ +M + V + T++ LI G C+ G
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 429 ACVLLEEMIEKGIRPSRVTFGKLRQLLIKE-KREDVLTFLHE 469
A + M+ G+ P+ +T+ L L K E L L +
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 179/355 (50%), Gaps = 3/355 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
++ + ++ +++++++Y ++ + +M+ G+ N+ T I++ + R ++ A+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKD 214
M K ++ F LL+ C+ V A +FD M G ++P++ Y+ +++G K
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+ A + M G PDVV+Y ++ LC +GR +A +V M P F +
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L+ E R+ +A + + EM R+ + D+V Y+ LI C ++ + M S
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDM 393
G P+ T +++I+ + + ++F M + + TYT++I+ +C ++++
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
A +I++ M P++ T++ L++GLC NG KA V+L +M + G+ VT+
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 162/318 (50%), Gaps = 2/318 (0%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF 197
++R R K+D+++ F M + ++A F+ LLSA+ K + +++ M+
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 198 EP-DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
P +L T +ILL + + L A +M+ G P +V++G +++ C+ RV +A+
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ M P IY+ ++ ++++A+D ME+ GI DVV YN+LI
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDA 375
C + ++ + R++ M + P+ T N +I + + +GR A E + MI + +PD
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
TY+++I C + +D A +++ M SK P + T+S LING C++ L E
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 436 MIEKGIRPSRVTFGKLRQ 453
M ++G+ + VT+ L Q
Sbjct: 352 MSQRGVVRNTVTYTILIQ 369
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++D+++++ M +P+ +S L+ + + I + +M+ GI ++ N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
L+ FC+ ++ L +M G P+ T +++ R A +F +M+ +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 371 C-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
+P+ Y +I C+ ++D A+ + M+ P + T+++LI+GLC +G A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 430 CVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
++ M ++ I P TF L +KE R
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 202/458 (44%), Gaps = 42/458 (9%)
Query: 27 PPPQEVADL--TETVCKVMMSSPGVT-LDAALNQTGVRASPELVENVLKRFENAGMSAFR 83
PP D + +C+V+ SS AL ++ V+ +PELV VL+ + G + R
Sbjct: 604 PPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLR 663
Query: 84 FFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKY 142
FF W ++ Y H AY++ I+ + ++ M + +MR +G ++ +T+ I++ +Y
Sbjct: 664 FFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQY 723
Query: 143 ARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC--KSRNVRKAQEIFDSM-KGRFEP 199
R + A+ TF M + + + F L++ LC K RNV +A F M + F P
Sbjct: 724 GRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVP 783
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D + L + N A+ + G P V+Y I + LC+ G+++EA+ +
Sbjct: 784 DRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSEL 842
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
+ + + Y +VH ++ A+D M+ G K V VY +LI F K
Sbjct: 843 ASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKE 902
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYT 379
+ + V ++ME CEP TYT
Sbjct: 903 KQLEKVLETCQKMEGES----------------------------------CEPSVVTYT 928
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
MI + +++ A +++M+ + P T+S IN LCQ + A LL EM++K
Sbjct: 929 AMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDK 988
Query: 440 GIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKE 477
GI PS + F + L +E + D+ +K + LV +
Sbjct: 989 GIAPSTINFRTVFYGLNREGKHDLARIALQKKSALVAQ 1026
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 193/429 (44%), Gaps = 49/429 (11%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
V+++ L + R PE+VENVLKR A RFF W +++ ++H V Y+ M+
Sbjct: 140 VSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIA 199
Query: 109 ARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
R ++ ++V++M G ++ T+ I++ Y +A K+ + + F M K +
Sbjct: 200 GEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDA 259
Query: 168 AAFNGLLSALC-----------------------------------KSRNVRKAQEIFDS 192
A+N ++ +LC KS V Q I D
Sbjct: 260 TAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADD 319
Query: 193 MKGRFE-PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
M E + + LL+ + + +A E RE+ + D + I+V LC+A R
Sbjct: 320 MVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANR 379
Query: 252 VDEAVEVV-----KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
+ +A+E+V + +DD+N +Y +++ Y +N + A++ F +++ G V
Sbjct: 380 MVDALEIVDIMKRRKLDDSN------VYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRV 433
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
Y ++ K +F+ + EM NG+ P+S +++ + Q R A++VF
Sbjct: 434 STYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSS 493
Query: 367 M-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
M K +P +Y++ +K C + D +KI+ M + + V FS +I+ + +NG
Sbjct: 494 MEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
Query: 426 AMKACVLLE 434
K ++ E
Sbjct: 554 KEKIHLIKE 562
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 141/298 (47%), Gaps = 2/298 (0%)
Query: 151 AVYTFN-VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILL 208
A+ FN V K + +N +LS ++RN+ E+ M K + D++T++IL+
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+GK + K F +M +G D +Y IM+ LC AGR D A+E K+M +
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
Y +L+ +++ +M R ++ + L+ +FC + K K +
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALEL 351
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCER 388
++E+++ + +++ +++ L R A E+ M + D++ Y ++I + +
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQ 411
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
N++ A++ ++ +K P + T++ ++ L + K C L EMIE GI P V
Sbjct: 412 NDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSV 469
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 5/228 (2%)
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G S V Y M+ I +A +D E+V +M+ N C +++L+ YG +I
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ F +M + G + D YN +I + C A + KEM G+T RT +++
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 351 LISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
+ + D + M++ICE + D + ++K FC ++ A+++ +++K+K
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV----TFGKLRQ 453
F L+ GLC+ + A +++ M + + S V G LRQ
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQ 411
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 176/399 (44%), Gaps = 44/399 (11%)
Query: 83 RFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKY 142
+FF+WA ++RN+ H Y +I L R Y M+ + + +V Y
Sbjct: 111 QFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQE-------------VVRNTY 157
Query: 143 ARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDL 201
V + A + L+ AL +++ V KA +F KGR +P
Sbjct: 158 --------------------VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTS 197
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAG-CSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
TY+ ++ ++ K E + EM + G C PD ++Y ++ K GR D A+ +
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
+M DN PT IY+ L+ Y ++E A+D F EM+R G V Y LI KA
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYT 379
+ K+M +G+TP+ N +++ L GR + VF M + C P +Y
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 380 MMIKMFCERNEMDMAMKIWKD-MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
+IK E + W D MK+ PS T+S LI+G C+ KA +LLEEM E
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 439 KGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKE 477
KG P + L L K KR +E N L KE
Sbjct: 438 KGFPPCPAAYCSLINALGKAKR-------YEAANELFKE 469
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 194/400 (48%), Gaps = 8/400 (2%)
Query: 50 TLDAALNQTGVRASPELVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIES 107
T+ + T V SP ++ ++K A M A F + + R T Y+ +I
Sbjct: 148 TIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVF-YQAKGRKCKPTSSTYNSVILM 206
Query: 108 LARIRQYQIMWDIVTKMRNKG--MLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQ 165
L + Q++ + ++ T+M N+G + T+ ++ Y + + D A+ F+ M +
Sbjct: 207 LMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQP 266
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETF 224
+ LL K V KA ++F+ MK P + TY+ L++G GK + +A +
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHT-YGV 283
++M+ G +PDVV +++IL K GRV+E V +M C PT Y+ ++ +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
+ + + F +M+ + Y+ LI +CK N+ + +L+EM+ G P
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+I++L R + A E+F+ + + + Y +MIK F + ++ A+ ++ +MK
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
++ P ++ ++AL++G+ + G +A LL +M E G R
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCR 546
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 159/328 (48%), Gaps = 4/328 (1%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
TV Y +I+ L + + + M G+ +V +M + +V+E F
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSR-NVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGK 213
+ M + + ++N ++ AL +S+ +V + FD MK P TYSIL++G+ K
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCK 421
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+ KA EM G P +Y +++ L KA R + A E+ K++ +N +S +
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV 481
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y+V++ +G ++ +A+D F EM+ +G DV YNAL+ KA +L++ME
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMD 392
NG + + N+I++ G RA E+F + +PD TY ++ F +
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGL 420
A ++ ++MK K F T+S++++ +
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMR-NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
AY +I +L + ++Y+ ++ +++ N G ++ + ++++ + + K+ EAV FN M
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNL 217
++ A+N L+S + K+ + +A + M+ D+ +++I+L G+ +
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP 565
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A E F + +G PD V+Y ++ AG +EA ++++M D + YS +
Sbjct: 566 RRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSI 625
Query: 278 VHTYGVENRIEDAIDAF 294
+ G + +D + +F
Sbjct: 626 LDAVGNVDHEKDDVSSF 642
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 219/516 (42%), Gaps = 98/516 (18%)
Query: 23 STGEPPPQ------EVADLTETVCKVMMSSPGVT---------------LDAALNQTGVR 61
S+ PPP+ +V+DL ++ + ++ SP V+ LD + ++
Sbjct: 55 SSSLPPPEWIEPFNDVSDLVKSN-RNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIK 113
Query: 62 ASPELVENVLKRFE--NAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWD 119
SP V VLK E A+ FF W+ +Q+ Y H + Y +++ LA + +
Sbjct: 114 LSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRF 173
Query: 120 IVTKMRN-KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
+ ++++ + + V +++ + + V+E ++ + M + + L +N L++ L
Sbjct: 174 VSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 233
Query: 179 KSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
+ V A+ +F+ M+ GR +PD+ TY+ +++G+ K KA E R+M + G D +
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 238 SYGIMVDI-----------------------------------LCKAGRVDEAVEVVKDM 262
+Y M+ LCK G+++E V ++M
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 353
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC----- 317
P IY+VL+ Y +EDAI M +G K DVV Y+ ++ C
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413
Query: 318 ------------------------------KANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
KA + R+ +EM G T +S N +
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 348 ISSLISQGRTDRAFEVFRRM--IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
I + + D A +F+RM + C+ TYT+++ + + + A+K+W M K
Sbjct: 474 IDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG 533
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
P+ F AL GLC +G +AC +L+E+ G+
Sbjct: 534 ITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 143/327 (43%), Gaps = 7/327 (2%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIE 106
V L +++ G++ P V+ G + FE R+ + + V Y ++I+
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN-VAIYTVLID 370
Query: 107 SLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQ 165
A+ + ++ +M ++G +V T+ +V+ + +V+EA+ F+ +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKARETF 224
N ++ L+ L K+ V +A+ +F+ M + D Y+ L++ + K + +A F
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 225 REMVSA-GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
+ M GC V +Y I++ + K R +EA+++ M D PT+ + L +
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
++ A E+ G+ D + +I CKA + K ++ + G R
Sbjct: 551 SGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRI 609
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI 370
V+I++L G+ D A ++ I I
Sbjct: 610 RTVMINALRKVGKADLAMKLMHSKIGI 636
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 5/351 (1%)
Query: 48 GVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIES 107
G + AL+ G R VLK+ +N +A FF W +RQ + H Y M+ +
Sbjct: 310 GHAAEEALHNFGFRMDAYQANQVLKQMDNYA-NALGFFYWLKRQPGFKHDGHTYTTMVGN 368
Query: 108 LARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQN 166
L R +Q+ + ++ +M R+ N T+ ++ Y RA+ + EA+ FN M + +
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPD 428
Query: 167 LAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFR 225
+ L+ K+ + A +++ M+ PD TYS+++ GK +LP A F
Sbjct: 429 RVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFC 488
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
EMV GC+P++V++ IM+ + KA + A+++ +DM + P YS+++ G
Sbjct: 489 EMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCG 548
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+E+A F EM+RK D VY L+ + KA + + M G+ PN TCN
Sbjct: 549 FLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCN 608
Query: 346 VIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE-RNEMDMA 394
++S+ + R A+ + + M+ + P TYT+++ + R+ DM
Sbjct: 609 SLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG 659
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 16/345 (4%)
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNV-MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
VE ++R++ H +EA++ F MD Y+ Q L + +AL +++
Sbjct: 297 VENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKR----- 351
Query: 191 DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
+ F+ D TY+ ++ G+ + + EMV GC P+ V+Y ++ +A
Sbjct: 352 ---QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
+ EA+ V M + C P Y L+ + ++ A+D + M+ G+ D Y+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
+I KA R+ EM G TPN T N++I+ + A +++R M
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 371 C-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
+PD TY++++++ ++ A ++ +M+ K +VP + L++ + GN KA
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 430 CVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLL 474
+ M++ G+RP+ T L ++ R + E NLL
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR------MSEAYNLL 627
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 180/351 (51%), Gaps = 3/351 (0%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
++ ++A++ ++ ++ KM G+ N+ T+ I++ + R ++ A+ M K
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKAR 221
++ N LL+ C + A + D M + ++PD T++ L+ G +A
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
MV GC PD+V+YG +V+ LCK G D A+ ++ M+ IYS ++ +
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
+DA++ F EME KG++ +V+ Y++LI C ++ + R+L +M + PN
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T + +I + + +G+ +A +++ MIK +P+ TY+ +I FC + + A ++ +
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
M K +P++ T++ LING C+ K L EM ++G+ + VT+ L
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 159/330 (48%), Gaps = 2/330 (0%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM- 193
F ++ A+ +K D + M+ + NL +N L++ C+ + A + M
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
K +EPD+ T + LL G+ + A +MV G PD V++ ++ L +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
EAV ++ M C P Y +V+ + A++ +ME I+A+VV+Y+ +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICE 372
+ CK + + EME+ GV PN T + +IS L + GR A + MI +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVL 432
P+ T++ +I F ++ ++ A K++++M + P++ T+S+LING C +A +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 433 LEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
LE MI K P+ VT+ L K KR D
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 3/307 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
QR + Y ++ L + + +++ KM + NV + V+ + D
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILL 208
+A+ F M+ V N+ ++ L+S LC A + D ++ + P+L T+S L+
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+ + K L KA + + EM+ P++ +Y +++ C R+ EA ++++ M +C+
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y+ L++ + R++ ++ F EM ++G+ + V Y LI F +A N + V
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCE 387
K+M S GV PN T N+++ L G+ +A VF + + EPD TY +MI+ C+
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 388 RNEMDMA 394
+ M
Sbjct: 511 AGKWKMG 517
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 39/326 (11%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GR 196
V+R ++D+A+ F VM + ++ F+ LLSA+ K + M+
Sbjct: 49 VLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG 108
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+L TY+IL+ + + L A +M+ G PD+V+ +++ C R+ +AV
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ +D +EM G K D V + LI
Sbjct: 169 AL--------------------------------VDQMVEM---GYKPDTVTFTTLIHGL 193
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPD 374
NK ++ M G P+ T +++ L +G TD A + +M KI E +
Sbjct: 194 FLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI-EAN 252
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
Y+ +I C+ D A+ ++ +M++K P++ T+S+LI+ LC G A LL
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 435 EMIEKGIRPSRVTFGKLRQLLIKEKR 460
+MIE+ I P+ VTF L +K+ +
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGK 338
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 1/203 (0%)
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
TS+ Y ++ T + ++DAI F M + ++ ++ L+ A K NKF V
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCER 388
++ME G++ N T N++I+ R A + +M+K+ EPD T ++ FC
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
N + A+ + M + P TF+ LI+GL + A +A L++ M+++G +P VT+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 449 GKLRQLLIKEKREDVLTFLHEKI 471
G + L K D+ L K+
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKM 244
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 213/484 (44%), Gaps = 84/484 (17%)
Query: 65 ELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM 124
E+VEN L+ A +S + F+ A + ++ MIES A + + +++++
Sbjct: 49 EVVENPLE----APISE-KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRI 103
Query: 125 RNKGMLNVE-TFCIVMRKYARAHKVDEAVYTFNVM-DKYEVPQNLAAFNGLLS------- 175
R + + +E +F +V R Y +AH D+AV F+ M D++ +++ +FN +L+
Sbjct: 104 RLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGL 163
Query: 176 --------------------------------ALCKSRNVRKAQEIFDSMKGR-FEPDLK 202
ALCK R V +A E+F M R PD
Sbjct: 164 YHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY L++G K+ + +A EM S GCSP V Y +++D LCK G + ++V +M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 263 DDNNCMPTSFIYSVLVH----------------------------TYGV-------ENRI 287
C+P Y+ L+H TYG + R
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
DA+ ME +G + +Y+ LI K K + + ++M G PN +V+
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 348 ISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRF 406
+ L +G+ + A E+ RMI C P+A TY+ ++K F + + A+++WK+M
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 407 VPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED-VLT 465
+ +S LI+GLC G +A ++ +M+ GI+P V + + + L D L
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 466 FLHE 469
HE
Sbjct: 524 LYHE 527
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 170/354 (48%), Gaps = 7/354 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y+++I+ L + + +V M KG + N T+ ++ K+D+AV M
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLP 218
+ N + L++ L K R A + SM+ R + + YS+L+ G K+
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+A +R+M GC P++V Y ++VD LC+ G+ +EA E++ M + C+P ++ YS L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+ E+A+ + EM++ G + Y+ LI C + K V +M + G+
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMI----KICEPDADTYTMMIKMFCERNEMDMA 394
P++ + II L G D A +++ M+ +PD TY +++ C + ++ A
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRA 559
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM-KACVLLEEMIEKGIRPSRVT 447
+ + M + P + T + +N L + N+ K LEE++ + ++ RV+
Sbjct: 560 VDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS 613
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEME-----RKGIKADVVVYNALI--GAFCKANKFK 323
SFI V+ YG + + A+D F M ++ +K+ V N +I G + + +F
Sbjct: 114 SFI--VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMI 382
+ V+ + ++PN + N++I +L DRA EVFR M + C PD TY ++
Sbjct: 172 DY--VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
C+ +D A+ + +M+S+ PS ++ LI+GLC+ G+ + L++ M KG
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 443 PSRVTFGKL-RQLLIKEKREDVLTFLHEKIN 472
P+ VT+ L L +K K + ++ L ++
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 206/437 (47%), Gaps = 22/437 (5%)
Query: 40 CKVMMSSPG---VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAH 96
CK++ S P V L++ + +LV ++ E G+ H
Sbjct: 58 CKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGI---------------GH 102
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
+ +Y+++I L R ++ I +V KM G +V T ++ + + ++V +A+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
+ M++ ++ +N ++ CK V A E+FD M + D TY+ L+ G
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
A R+MV P+V+++ ++D+ K G+ EA+++ ++M P F Y
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L++ + R+++A M KG DVV YN LI FCK+ + ++ +EM
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMA 394
G+ ++ T N II GR D A E+F RM P+ TY++++ C ++ A
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS--RPNIRTYSILLYGLCMNWRVEKA 400
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+ ++++M+ + T++ +I+G+C+ GN A L + KG++P V++ +
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 455 LIKEKREDVLTFLHEKI 471
++++ D L+ K+
Sbjct: 461 FCRKRQWDKSDLLYRKM 477
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 141/285 (49%), Gaps = 2/285 (0%)
Query: 180 SRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
S N+ + ++F M + R P + +S +L K N F M G D+ S
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
Y I+++ LC+ R A+ VV M P S L++ + NR+ DAID +ME
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
G + DVV+YN +I CK + + ME +GV ++ T N +++ L GR
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 359 RAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
A + R M+ + P+ T+T +I +F + + AMK++++M + P + T+++LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
NGLC +G +A +L+ M+ KG P VT+ L K KR D
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 154/367 (41%), Gaps = 56/367 (15%)
Query: 19 ARMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENA 77
+M+ G EP V+ L C+ + L + + + G R + ++
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 78 GM--SAFRFFEWAERQRNYAHTVRAYHLMIESL---------ARIRQYQIMWDIVTKMRN 126
G+ A F+ ER A V Y+ ++ L AR+ + +M DIV
Sbjct: 188 GLVNDAVELFDRMERDGVRADAV-TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP---- 242
Query: 127 KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
NV TF V+ + + K EA+ + M + V ++ +N L++ LC V +A
Sbjct: 243 ----NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 187 QEIFDSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
+++ D M KG PD+ TY+ L+ G+ K + + + FREM G D ++Y ++
Sbjct: 299 KQMLDLMVTKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFI------------------------------- 273
+AGR D A E+ MD + T I
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 274 -YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
Y++++H +EDA D F + KG+K DVV Y +I FC+ ++ + ++M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 333 ESNGVTP 339
+ +G+ P
Sbjct: 478 QEDGLLP 484
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
++E +++ M + +P+ +S ++ + I F ME GI D+ YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC 371
+I C+ ++F V+ +M G P+ T + +I+ R A ++ +M ++
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 372 -EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
PD Y +I C+ ++ A++++ M+ T+++L+ GLC +G A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 431 VLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKEP 478
L+ +M+ + I P+ +TF + + +KE + L+E++ +P
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 169/333 (50%), Gaps = 5/333 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V + ++ + V+ A+ F+ M+ Y + ++ + L++ LC S R A +
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 191 DSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M K + +PD+ T++ L++ + K+ A E + EM+ +P++ +Y +++ C
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G VDEA ++ M+ C P Y+ L++ + +++DA+ F EM +KG+ + + Y
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF----R 365
LI F + K + V M S GV PN RT NV++ L G+ +A +F +
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 366 RMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
R + P+ TY +++ C +++ A+ +++DM+ + + T++ +I G+C+ G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
A L + KG++P+ VT+ + L +E
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 164/346 (47%), Gaps = 3/346 (0%)
Query: 113 QYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFN 171
Q+ D+ T M ++ + ++ F ++ A+ K D + + + V +L N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 172 GLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
L++ C+S A M K FEPD+ T++ L+ G+ + +A +MV
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G PDVV Y ++D LCK G V+ A+ + M++ P +Y+ LV+ R DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
M ++ IK DV+ +NALI AF K KF + + EM + PN T +I+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 351 LISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
+G D A ++F M K C PD YT +I FC+ ++D AMKI+ +M K +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
T++ LI G Q G A + M+ +G+ P+ T+ L L
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N+ T+ ++ + VDEA F +M+ ++ A+ L++ CK + V A +IF
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 191 DSMKGR-FEPDLKTYSILLEGWGK--DPNLPKARETFREMVSAGCSPDVVSYGIMVDILC 247
M + + TY+ L++G+G+ PN+ A+E F MVS G P++ +Y +++ LC
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNV--AQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 248 KAGRVDEAVEVVKDMDD---NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
G+V +A+ + +DM + P + Y+VL+H ++E A+ F +M ++ +
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
++ Y +I CKA K KN + + S GV PN T +IS L +G A +F
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 365 RRM 367
R+M
Sbjct: 519 RKM 521
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G S D+ + ++++ C++ + A + M P ++ L++ + + NR+E+A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ +M GIK DVV+Y +I + CK + +ME+ G+ P+ +++
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 351 LISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
L + GR A + R M K +PD T+ +I F + + A +++ +M P+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+ T+++LING C G +A + M KG P V + L K K+ D
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
+ +EA+++ M ++ +P+ ++ L++ + + I+ ++ G+ D+ N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
L+ FC++++ L +M G P+ T +I+ R + A + +M+++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 371 -CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
+PD YT +I C+ ++ A+ ++ M++ P + +++L+NGLC +G A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 430 CVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
LL M ++ I+P +TF L +KE +
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 176/347 (50%), Gaps = 12/347 (3%)
Query: 121 VTKMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK 179
V +MR G+L + C ++ +Y + KV EA + M + + + L++ L K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 180 SRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
+ V A+EIF M+G+ PD+ +Y +L+ G+ K N+ KA F EMV G +P+V+
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
Y +++ C++G +++A E++ +M P + Y ++ Y + +A F EM+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN--GVTPNSRTCNVIISSLISQGR 356
KG+ D VY L+ C+ N +V R + +N G ++ N +I+ + G+
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLN---DVERAITIFGTNKKGCASSTAPFNALINWVFKFGK 781
Query: 357 TDRAFEVFRRMI-----KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLH 411
T+ EV R++ + +P+ TY +MI C+ ++ A +++ M++ +P++
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
T+++L+NG + G + + +E I GI P + + + +KE
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 182/389 (46%), Gaps = 38/389 (9%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y ++I+ L +I++ + ++ +M + G+ L+ T+ +++ + D A + M
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLP 218
+ + ++ + + K + KA+ +FD M P + Y+ L+EG+ ++ N+
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+ E EM +YG +V +C +G +D A +VK+M + C P IY+ L+
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
T+ +R DA+ EM+ +GI D+ YN+LI KA + R L EM NG+
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 339 PNSRTCNVIISSLIS-----------------------------------QGRTDRAFEV 363
PN+ T IS I +G+ A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 364 FRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+R M+ + DA TYT+++ + +++D A +I+++M+ K P + ++ LING +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 423 NGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
GN KA + +EM+E+G+ P+ + + L
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 175/398 (43%), Gaps = 28/398 (7%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNK---GMLNVE-------------- 133
+RN V+ YH++I + R Q+ D++ K + LNV+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273
Query: 134 -----TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQE 188
T+ +++ + ++++A MD V + ++ L+ L K RN A+
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 189 IFDSMKGR---FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
+ M +P + Y + K+ + KA+ F M+++G P +Y +++
Sbjct: 334 LVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
C+ V + E++ +M N + + + Y +V ++ A + EM G + +
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
VV+Y LI F + ++F + RVLKEM+ G+ P+ N +I L R D A
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 366 RMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
M++ +P+A TY I + E +E A K K+M+ +P+ + LIN C+ G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
++AC M+++GI T+ L L K + D
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 19/351 (5%)
Query: 103 LMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
+++++L R + + WD+ M + ++ +V+T+ +++ + RA V +V+ K
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK---DVLFKT 247
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDPNLPK 219
E A N V A ++ +SM KG P TY +L++G K L
Sbjct: 248 EKEFRTATLN-----------VDGALKLKESMICKG-LVPLKYTYDVLIDGLCKIKRLED 295
Query: 220 ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
A+ EM S G S D +Y +++D L K D A +V +M + ++Y +
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355
Query: 280 TYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP 339
E +E A F M G+ Y +LI +C+ + +L EM+ +
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIW 398
+ T ++ + S G D A+ + + MI C P+ YT +IK F + + AM++
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG 449
K+MK + P + +++LI GL + +A L EM+E G++P+ T+G
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 164/373 (43%), Gaps = 46/373 (12%)
Query: 99 RAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNV 157
+ Y +++ L + + +I +MR KG+ +V ++ +++ +++ + +A F+
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPN 216
M + + N+ +N LL C+S + KA+E+ D M + P+ TY +++G+ K +
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV-------------------- 256
L +A F EM G PD Y +VD C+ V+ A+
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 257 --------------EVVKDMDDNN----CMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
EV+ + D + P Y++++ E +E A + F +M+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
+ V+ Y +L+ + K + + V E + G+ P+ +VII++ + +G T
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 359 RAFEVFRRMIKI------CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
+A + +M C+ T ++ F + EM++A K+ ++M +++P T
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Query: 413 FSALINGLCQNGN 425
LIN C + N
Sbjct: 953 VIELINESCISSN 965
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 178/427 (41%), Gaps = 43/427 (10%)
Query: 60 VRASPELVENVL--KRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIM 117
+ +PE+V +VL KR ++ FF W + Q+ + ++ + L ++
Sbjct: 58 IEINPEVVLSVLRSKRVDDPS-KLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKA 116
Query: 118 WDIVTKMRNKGMLNVETFCIVMR-KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSA 176
+V +M + E + ++R K D+ V F ++ F+G ++
Sbjct: 117 LSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGV-LFGIL-----------FDGYIA- 163
Query: 177 LCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
+ +A +F S G P L +LL+ + L + ++ MV D
Sbjct: 164 ---KGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD 220
Query: 236 VVSYGIMVDILCKAGRV---------------------DEAVEVVKDMDDNNCMPTSFIY 274
V +Y +++ C+AG V D A+++ + M +P + Y
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTY 280
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
VL+ R+EDA +EM+ G+ D Y+ LI K + ++ EM S
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
+G+ + I + +G ++A +F MI P A Y +I+ +C +
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
++ +MK + V S +T+ ++ G+C +G+ A +++EMI G RP+ V + L +
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 454 LLIKEKR 460
++ R
Sbjct: 461 TFLQNSR 467
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 176/388 (45%), Gaps = 7/388 (1%)
Query: 54 ALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQ 113
+LN + + E V VL+ + + RFF WA +Y T Y + +SLA ++
Sbjct: 67 SLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKK 126
Query: 114 YQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDK-YEVPQNLAAFN 171
Y+ MW I+ +M++ + ++ ET C ++ +Y + VD+AV FN + K Q + +N
Sbjct: 127 YESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYN 186
Query: 172 GLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
LL ALC + A + M KG +PD +TY+IL+ GW + +A+E EM
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKG-LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
G +P ++++ L AG ++ A E+V M +P +++L+ +E
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF 305
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
I+ + + G+ D+ Y LI A K K R+L +G P II
Sbjct: 306 CIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIK 365
Query: 350 SLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
+ G D AF F M +K P+ YTM+I M + A +M VP
Sbjct: 366 GMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEM 436
F + +GL +NG + +E++
Sbjct: 426 ISRCFDMVTDGL-KNGGKHDLAMRIEQL 452
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 4/253 (1%)
Query: 202 KTYSILLEGWGKDPNLPKARETFREMV-SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
+T ++E +GK+ ++ +A E F + + GC V Y ++ LC A +++
Sbjct: 147 ETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIR 206
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
M P Y++LV+ + ++++A + EM R+G + LI A
Sbjct: 207 RMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAG 266
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI--CEPDADTY 378
++ + ++ +M G P+ +T N++I ++ G + E++ K+ C D DTY
Sbjct: 267 YLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV-DIDTY 325
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
+I + ++D A ++ + P ++ +I G+C+NG A +M
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKV 385
Query: 439 KGIRPSRVTFGKL 451
K P+R + L
Sbjct: 386 KAHPPNRPVYTML 398
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
Y L + K++++ ++LK+M+ + + T II G D+A E+F +
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 369 KI--CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
K C+ D Y ++ C+ A + + M K P T++ L+NG C G
Sbjct: 174 KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKM 233
Query: 427 MKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+A L+EM +G P + R LLI+
Sbjct: 234 KEAQEFLDEMSRRGFNPP----ARGRDLLIE 260
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 174/357 (48%), Gaps = 3/357 (0%)
Query: 95 AHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVY 153
+H + ++ ++I R + + ++ KM G ++ T ++ + + ++ EAV
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 154 TFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWG 212
+ MD + N+ +N +++ LCK+R++ A E+F M K D TY+ L+ G
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
A R+MV P+V+ + ++D K G + EA + K+M + +P F
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
Y+ L++ + + + DA F M KG DVV YN LI FCK+ + ++ ++ EM
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEM 391
G+ ++ T N +I G+ + A +VF RM+ PD TY +++ C ++
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ A+ + +D++ + T++ +I GLC+ +A L + KG++P + +
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 194/422 (45%), Gaps = 31/422 (7%)
Query: 70 VLKRFENAGMSAFRFFEWA-------ERQRNYAHTVR---AYHLMIESL----------- 108
+L+R N S R F A ER RN H ++ A+ L E L
Sbjct: 23 LLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDF 82
Query: 109 -------ARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDK 160
A++ ++ I+ + KM N G+ ++ +F I++ + R ++ A+ M K
Sbjct: 83 TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 142
Query: 161 YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPK 219
++ LL+ C+ ++A + DSM G F P++ Y+ ++ G K+ +L
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 220 ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
A E F M G D V+Y ++ L +GR +A +++DM P ++ L+
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 280 TYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP 339
T+ E + +A + + EM R+ + +V YN+LI FC + + + M S G P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIW 398
+ T N +I+ R + ++F M + DA TY +I +C+ ++++A K++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
M P + T++ L++ LC NG KA V++E++ + + +T+ + Q L +
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 459 KR 460
+
Sbjct: 443 DK 444
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV T+ ++ + + +A Y F++M ++ +N L++ CKS+ V ++F
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M + D TY+ L+ G+ + L A++ F MV G SPD+V+Y I++D LC
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G++++A+ +V+D+ + Y++++ +++++A F + RKG+K D + Y
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
+I C+ + ++ + M+ +G P+ R
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
V Y+ +I + ++ + + +M +G++ + T+ ++ Y +A K++ A FN
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDP 215
M V ++ +N LL LC + + KA + D K + D+ TY+I+++G +
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
L +A FR + G PD ++Y M+ LC+ G EA ++ + M ++ MP+ IY
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 184/374 (49%), Gaps = 5/374 (1%)
Query: 71 LKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML 130
LK E+ + F ++ E + H +Y +I LA+ R + + I+ +R + +
Sbjct: 56 LKEIEDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVR 113
Query: 131 NVET-FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
E+ F +++ Y +A VD+A+ F+ + ++ + + + N L++ L + + KA+
Sbjct: 114 CRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSF 173
Query: 190 FDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
FD K R P+ +++IL++G+ + A + F EM+ P VV+Y ++ LC+
Sbjct: 174 FDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR 233
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
+ +A +++DM P + + +L+ + +A +ME +G K +V
Sbjct: 234 NDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVN 293
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM- 367
Y L+ K + + +L EM+ + P+ N++++ L ++ R A+ V M
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 368 IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
+K C+P+A TY MMI FC + D + + M + R P+ TF ++ GL + GN
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413
Query: 428 KACVLLEEMIEKGI 441
AC +LE M +K +
Sbjct: 414 HACFVLEVMGKKNL 427
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSIL 207
+EA+ F+ + + +++ L+ L KSRN +I ++ R + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
++ +GK ++ KA + F ++ S C + S ++++L G +++A D
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P S +++L+ + + E A F EM ++ VV YN+LIG C+ + +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV-FRRMIKICEPDADTYTMMIKMFC 386
+L++M + PN+ T +++ L +G + A ++ F + C+P Y +++
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+R +D A + +MK +R P + ++ L+N LC +A +L EM KG +P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 447 TF 448
T+
Sbjct: 363 TY 364
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 3/251 (1%)
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
+DP +A F + G D SY ++ L K+ D ++++ + N
Sbjct: 60 EDPE--EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRES 117
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
++ L+ YG ++ AID F ++ + N LI + + +
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEM 391
+ + PNS + N++I + + + A +VF M+++ +P TY +I C ++M
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A + +DM KR P+ TF L+ GLC G +A L+ +M +G +P V +G L
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 452 RQLLIKEKRED 462
L K R D
Sbjct: 298 MSDLGKRGRID 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N TF ++M+ + +EA M+ L + L+S L K + +A+ +
Sbjct: 255 NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
MK R +PD+ Y+IL+ + +P+A EM GC P+ +Y +M+D C+
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
D + V+ M + PT + +V ++ A M +K + +
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAW 434
Query: 310 NALIGAFC 317
L+ C
Sbjct: 435 QNLLSDLC 442
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 187/382 (48%), Gaps = 38/382 (9%)
Query: 62 ASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV 121
SP V+ ++ ++ + A F++A +Q N+ H+ ++ ++I L R R + ++ D++
Sbjct: 49 GSPTRVQKLIAS-QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVL 107
Query: 122 TKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKS 180
K R+ G L E F +++ YA A ++ + TF M ++ N +L L
Sbjct: 108 AKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 167
Query: 181 RN-VRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
R ++KA E+F S + P+ ++Y++L++ + + +L A + F +M+ PDV S
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
Y I++ C+ G+V+ A+E++ DM + +P Y+ L+++ + ++ +A M+
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
KG D+V YN +I FC+ ++ + R+VL +M SNG +PNS + +I L QG
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG--- 344
Query: 359 RAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
MF D K ++M SK F P + L+
Sbjct: 345 -------------------------MF------DEGKKYLEEMISKGFSPHFSVSNCLVK 373
Query: 419 GLCQNGNAMKACVLLEEMIEKG 440
G C G +AC ++E +++ G
Sbjct: 374 GFCSFGKVEEACDVVEVVMKNG 395
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA-GRVDEAVEVVKD 261
TY I + K P K TF +M+ +P ++D+L G + +A E+ K
Sbjct: 123 TYLIKVYAEAKLPE--KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ MP + Y++L+ + + + + A F +M + + DV Y LI FC+ +
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTM 380
+L +M + G P+ + +++SL + + A+++ RM +K C PD Y
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
MI FC + A K+ DM S P+ ++ LI GLC G + LEEMI KG
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 441 IRP 443
P
Sbjct: 361 FSP 363
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 138/272 (50%), Gaps = 5/272 (1%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVM 139
AF F+ + R R+Y+L++++ I + + KM + ++ +V+++ I++
Sbjct: 174 AFELFK-SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 140 RKYARAHKVDEAVYTFN-VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF- 197
+ + R +V+ A+ + +++K VP L+ + LL++LC+ +R+A ++ MK +
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLS-YTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
PDL Y+ ++ G+ ++ AR+ +M+S GCSP+ VSY ++ LC G DE +
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+++M P + + LV + ++E+A D + + G + +I C
Sbjct: 352 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
++ + ++ L++ +T ++R +V I
Sbjct: 412 NEDESEKIKLFLEDAVKEEITGDTRIVDVGIG 443
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF-KNVRRV 328
T I++ L+ Y E + F +M N ++ + + +
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCE 387
K +GV PN+R+ N+++ + A+++F +M+ + PD D+Y ++I+ FC
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ +++ AM++ DM +K FVP +++ L+N LC+ +A LL M KG P V
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVH 297
Query: 448 FGKLRQLLIKEKR 460
+ + +E R
Sbjct: 298 YNTMILGFCREDR 310
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 10/273 (3%)
Query: 186 AQEIFD--SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
A+EIFD S + F ++ IL+ G+ + + S+G + ++
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPT----SFIYSVLVHTYGVENRIEDAIDAFLEMER 299
+ +A ++ + M + N P + I VLV G ++ A + F
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY---LQKAFELFKSSRL 183
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
G+ + YN L+ AFC + ++ +M V P+ + ++I +G+ +
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 360 AFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
A E+ M+ K PD +YT ++ C + ++ A K+ MK K P L ++ +I
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
G C+ AM A +L++M+ G P+ V++ L
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 25/358 (6%)
Query: 95 AHTVRAYHLMIESLAR-IRQYQIMWDIVTK-MRNKGMLNVETFCIVMRKYARAHKVDEAV 152
T RA L E+L + I+ I+++ + K + N+GM + EA
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM------------------ILEAA 411
Query: 153 YTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEG 210
N M + + + FN L++ LCK V A + M KG F PD+ T++IL+ G
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF-PDIFTFNILIHG 470
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+ + A E M+ G PDV +Y +++ LCK + ++ +E K M + C P
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
F +++L+ + ++++A+ EM+ K + D V + LI FCK + +
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 331 EME-SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCER 388
+ME + V+ ++ T N+II + + A ++F+ M+ C PD TY +M+ FC+
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+++ K +M F+PSL T +IN LC +A ++ M++KG+ P V
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 184/409 (44%), Gaps = 53/409 (12%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD------- 149
V Y+ +I L + ++Q + KM N+G+ + T+ ++ Y + V
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
+AV+ V D++ + L+ LC +A +F+ G+ +P++ Y+ L+
Sbjct: 346 DAVFNGFVPDQF-------TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+G + +A + EM G P+V ++ I+V+ LCK G V +A +VK M
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P F +++L+H Y + ++E+A++ M G+ DV YN+L+ CK +KF++V
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCE 387
K M G PN T N+++ SL + D A + M K PDA T+ +I FC+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 388 RNEMD------------------------------------MAMKIWKDMKSKRFVPSLH 411
++D MA K++++M + P +
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
T+ +++G C+ GN L EM+E G PS T G++ L E R
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 167/411 (40%), Gaps = 72/411 (17%)
Query: 79 MSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMR-NKGMLNVE-TFC 136
M A F ++ + HT+ Y +IE L +++ M +++ MR N G +E +
Sbjct: 21 MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
M+ Y R KV EAV F MD Y+ + ++N ++S L S +A +++ M+ R
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
G +PDV S+ I + CK R A+
Sbjct: 141 ----------------------------------GITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
++ +M C Y +V + EN + + F +M G+ + +N L+
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK------- 369
CK K ++L ++ GV PN T N+ I L +G D A + +I+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 370 ---------IC--------------------EPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+C EPD+ TY +I +C+ + +A +I D
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
FVP T+ +LI+GLC G +A L E + KGI+P+ + + L
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 209/506 (41%), Gaps = 62/506 (12%)
Query: 26 EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFE---------- 75
E + + D+ E V M+ V A+ G + + NV +R +
Sbjct: 57 EAMEEVLVDMRENVGNHMLEGVYV---GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFS 113
Query: 76 -NAGMSAF---RFFEWAE------RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMR 125
NA MS +F+ A R R V ++ + ++S + + ++ M
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 126 NKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
++G +NV +C V+ + + E F M V L+ FN LL LCK +V+
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233
Query: 185 KAQEIFDSM---------------------KGRFE---------------PDLKTYSILL 208
+ +++ D + +G + PD+ TY+ L+
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G K+ +A +MV+ G PD +Y ++ CK G V A +V D N +
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P F Y L+ E A+ F E KGIK +V++YN LI ++
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCE 387
EM G+ P +T N++++ L G A + + MI K PD T+ ++I +
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ +M+ A++I M P ++T+++L+NGLC+ + M+EKG P+ T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 448 FGKLRQLLIKEKRED-VLTFLHEKIN 472
F L + L + ++ D L L E N
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKN 559
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 159/335 (47%), Gaps = 3/335 (0%)
Query: 120 IVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
++ K+ +G+L N+ T+ + ++ + ++D AV + + ++ +N L+ LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 179 KSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
K+ ++A+ M EPD TY+ L+ G+ K + A + V G PD
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
+Y ++D LC G + A+ + + P +Y+ L+ + I +A EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
KG+ +V +N L+ CK + ++K M S G P+ T N++I +Q +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 358 DRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+ A E+ M+ +PD TY ++ C+ ++ + M+ +K M K P+L TF+ L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ LC+ +A LLEEM K + P VTFG L
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 7/254 (2%)
Query: 213 KDPNLPKARETFREM-VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN--NCMP 269
KDP KA E F M G + +Y +++ L G+ + EV+ DM +N N M
Sbjct: 18 KDP--MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHML 75
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
+Y + YG + ++++A++ F M+ + V YNA++ + F +V
Sbjct: 76 EG-VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCER 388
M G+TP+ + + + S R A + M + CE + Y ++ F E
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
N +++ M + L TF+ L+ LC+ G+ + LL+++I++G+ P+ T+
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 449 GKLRQLLIKEKRED 462
Q L + D
Sbjct: 255 NLFIQGLCQRGELD 268
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
++ A + +++++ESL R R+ ++ +M+NK + + TF ++ + + +D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 150 EAVYTFNVMDK-YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSIL 207
A F M++ Y+V + +N ++ A + NV A+++F M R PD TY ++
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
++G+ K N+ + EM+ G P + + G +++ LC RV EA ++ M
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Query: 268 MPTS 271
+P +
Sbjct: 704 VPEA 707
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 175/366 (47%), Gaps = 3/366 (0%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
V Y + I L R + + + M+ G+L N+ T+ ++ Y + V +A +
Sbjct: 234 VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYK 293
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDP 215
+ E+ N+ F L+ CK+R + A+ +F M K +P+L Y+ L+ G K
Sbjct: 294 EILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
N+ +A EM S SPDV +Y I+++ LC +V EA + + M + P+S Y+
Sbjct: 354 NMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
L+H Y E +E A+D EM G++ +++ ++ LI +C K + EM
Sbjct: 414 SLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMA 394
G+ P+ T +I + + A ++ M++ P+ T+ ++ F + + +A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+ +++ +R + F+ LI GLCQNG ++A +M GI P ++ + +
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 455 LIKEKR 460
++EKR
Sbjct: 594 HLQEKR 599
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 189/397 (47%), Gaps = 3/397 (0%)
Query: 79 MSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCI 137
M F W R+ + +A ++ L R R++ +W M ++G++ +V + +
Sbjct: 145 MGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFV 204
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR- 196
+ + + + + M + N+ + + LC+ + +A+++F+ MK
Sbjct: 205 LFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHG 264
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
P+L TYS +++G+ K N+ +A ++E++ A P+VV +G +VD CKA + A
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ M P ++Y+ L+H + + +A+ EME + DV Y LI
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDA 375
C ++ R+ ++M++ + P+S T N +I + ++A ++ M EP+
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
T++ +I +C ++ AM ++ +M K VP + T++ALI+ + N +A L +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 436 MIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKIN 472
M+E GI P+ TF L KE R V +++ N
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 75 ENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVE 133
E+ A R F+ + +R + + Y+ +I + + D+ ++M G+ N+
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSA-TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNII 445
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DS 192
TF ++ Y + A+ + M + ++ + L+ A K N+++A ++ D
Sbjct: 446 TFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Query: 193 MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
++ P+ T++ L++G+ K+ L A + ++E + V + +++ LC+ G +
Sbjct: 506 LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
A DM P Y ++ + E RI D + +M + GI +++V N L
Sbjct: 566 LRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV-NQL 624
Query: 313 IGAFCKANKF 322
+ F +AN +
Sbjct: 625 LARFYQANGY 634
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 180/354 (50%), Gaps = 3/354 (0%)
Query: 94 YAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAV 152
++ V Y +I+ + + + D+ +M G++ N T+ +++ + +
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 153 YTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGW 211
+ M + V NL +N +++ LCK + A ++FD M+ R ++ TY+ L+ G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 212 GKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
++ L +A + +M S G +P++++Y ++D C G++ +A+ + +D+ P+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
Y++LV + + A EME +GIK V Y LI F +++ + ++
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNE 390
ME G+ P+ T +V+I +G+ + A +F+ M+ K CEP+ Y MI +C+
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 391 MDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
A+K+ K+M+ K P++ ++ +I LC+ + +A L+E+MI+ GI PS
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 156/321 (48%), Gaps = 3/321 (0%)
Query: 99 RAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNV 157
R Y ++I L + + +++ KM+ G+ N+ T+ VM + + + +A F+
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPN 216
M + V N+ +N L+ LC+ + +A ++ D MK P+L TY+ L++G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L KA R++ S G SP +V+Y I+V C+ G A ++VK+M++ P+ Y++
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+ T+ + +E AI L ME G+ DV Y+ LI FC + R+ K M
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAM 395
PN N +I +G + RA ++ + M K P+ +Y MI++ C+ + A
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 396 KIWKDMKSKRFVPSLHTFSAL 416
++ + M PS S +
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 187/391 (47%), Gaps = 37/391 (9%)
Query: 118 WDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
W + ++K +L+V +F I+++ A +++++ + ++ N+ + L+
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 178 CKSRNVRKAQEIFDSM-------------------------KGRFE-----------PDL 201
CK + KA+++F M K FE P+L
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
TY+ ++ KD A + F EM G S ++V+Y ++ LC+ +++EA +VV
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M + P Y+ L+ + ++ A+ +++ +G+ +V YN L+ FC+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTM 380
+++KEME G+ P+ T ++I + ++A ++ M ++ PD TY++
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+I FC + +M+ A +++K M K P+ ++ +I G C+ G++ +A LL+EM EK
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 441 IRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
+ P+ ++ + ++L KE++ L EK+
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 175/390 (44%), Gaps = 37/390 (9%)
Query: 99 RAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
R Y ++I S + + + +M + G + + + ++F
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNL 217
+K +V ++ +F L+ C++ + K+ ++ + + F P++ Y+ L++G K +
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
KA++ F EM G + +Y ++++ L K G + E+ + M ++ P + Y+ +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
++ + R +DA F EM +G+ ++V YN LIG C+ K +V+ +M+S+G+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFR-------------------------------R 366
PN T N +I G+ +A + R +
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 367 MIKICE-----PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
M+K E P TYT++I F + M+ A+++ M+ VP +HT+S LI+G C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
G +A L + M+EK P+ V + +
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 70/160 (43%)
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
E + K +Y +I ++ ++ EM NG P S N +++ ++
Sbjct: 86 ESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF 145
Query: 358 DRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
++ + F D ++ ++IK CE E++ + + ++ F P++ ++ LI
Sbjct: 146 NQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+G C+ G KA L EM + G+ + T+ L L K
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 202/431 (46%), Gaps = 6/431 (1%)
Query: 30 QEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAG--MSAFRFFEW 87
Q V D+ K S + L TG+ A + +++ ++G + A FE
Sbjct: 270 QLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE- 328
Query: 88 AERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYARAH 146
RQ RAY+ +++ + + +V++M +G+ E T+ +++ Y A
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYS 205
+ + A M+ +V N F+ LL+ +K ++ MK +PD + Y+
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
++++ +GK L A TF M+S G PD V++ ++D CK GR A E+ + M+
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
C+P + Y++++++YG + R +D +M+ +GI +VV + L+ + K+ +F +
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKM 384
L+EM+S G+ P+S N +I++ +G +++A FR M +P +I
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
F E A + + MK P + T++ L+ L + K V+ EEMI G +P
Sbjct: 629 FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Query: 445 RVTFGKLRQLL 455
R LR L
Sbjct: 689 RKARSMLRSAL 699
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 186/443 (41%), Gaps = 75/443 (16%)
Query: 90 RQRNYAHTVRAYHLMIESLAR---IRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAH 146
RQ Y Y L+I+SL R I ++ R+K L+V+ ++ +A++
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYS 205
+A+ + + A ++SAL S +A+ +F+ ++ +P + Y+
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
LL+G+ K L A EM G SPD +Y +++D AGR + A V+K+M+
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 266 NCMPTSFI-----------------------------------YSVLVHTYGVENRIEDA 290
+ P SF+ Y+V++ T+G N ++ A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANK----------------------------- 321
+ F M +GI+ D V +N LI CK +
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 322 ------FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPD 374
+ +++R+L +M+S G+ PN T ++ GR + A E M + +P
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
+ Y +I + +R + A+ ++ M S PSL ++LIN ++ +A +L+
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
Query: 435 EMIEKGIRPSRVTFGKLRQLLIK 457
M E G++P VT+ L + LI+
Sbjct: 644 YMKENGVKPDVVTYTTLMKALIR 666
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 168/356 (47%), Gaps = 16/356 (4%)
Query: 101 YHLMIESLARIRQ-YQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y ++I +L R + Y+ + K L T+ ++ AR + +++A+ M
Sbjct: 170 YSILIHALGRSEKLYEAFL-----LSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 160 KYEVPQNLAAFNGLLSALCKSRNV------RKAQEIFDSMKGRFEPDLKTYSILLEGWGK 213
+ + ++ ++ +L +S + R +EI + + E D++ + ++ G+ K
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEI---ERDKLELDVQLVNDIIMGFAK 281
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+ KA + + G S + ++ L +GR EA + +++ + P +
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y+ L+ Y ++DA EME++G+ D Y+ LI A+ A ++++ R VLKEME
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMD 392
+ V PNS + +++ +G + F+V + M I +PD Y ++I F + N +D
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
AM + M S+ P T++ LI+ C++G + A + E M +G P T+
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 137/285 (48%), Gaps = 37/285 (12%)
Query: 113 QYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFN 171
++Q + ++ +M++ G+ + + + +V+ + + + +D A+ TF+ M + + +N
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 172 GLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
L+ CK A+E+F++M+ R P TY+I++ +G + +M S
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ 543
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G P+VV++ +VD+ K+GR ++A+E +++M P+S +Y+ L++ Y E A
Sbjct: 544 GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Query: 291 IDAF-----------------------------------LEMERKGIKADVVVYNALIGA 315
++AF M+ G+K DVV Y L+ A
Sbjct: 604 VNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
+ +KF+ V V +EM +G P+ + +++ S+L +T RA
Sbjct: 664 LIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 265 NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN 324
N C +YS+L+H G R E +AFL +++ + + YNALIGA + N +
Sbjct: 161 NLCFSYELLYSILIHALG---RSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEK 215
Query: 325 VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI----CEPDADTYTM 380
++ +M +G + +++I SL + D + R +I E D
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVM-LLRLYKEIERDKLELDVQLVND 274
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+I F + + A+++ ++ T ++I+ L +G ++A L EE+ + G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 441 IRPSRVTFGKLRQLLIK 457
I+P + L + +K
Sbjct: 335 IKPRTRAYNALLKGYVK 351
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 180/363 (49%), Gaps = 8/363 (2%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMR 140
AF F+W E++ ++ LMI L +++ I W ++ M N + ++M
Sbjct: 140 AFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMD 197
Query: 141 KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPD 200
+YA A+ +A+ TF++MDK++ AF GLL ALC+ ++ KA+E + K F D
Sbjct: 198 RYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVD 257
Query: 201 LKTYSILLEGW-GKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
++ ++++L GW ++ +A+ +REM + +P+ SY M+ K G + +++ +
Sbjct: 258 VEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLY 317
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
+M P +Y+ LV+ E+ ++A+ ++ +G+K D V YN++I C+A
Sbjct: 318 DEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEA 377
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTY 378
K R VL M S ++P T + + ++ ++ EV +M I P +T+
Sbjct: 378 GKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETF 433
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
+++ + + + A+KIW +M V + + A I GL G KA + EM
Sbjct: 434 LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKS 493
Query: 439 KGI 441
KG
Sbjct: 494 KGF 496
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 3/226 (1%)
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
+M+D A +A+ MD P + L+ IE A + F+ +K
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKA-EEFMLASKK 252
Query: 301 GIKADVVVYNALIGAFCKA-NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
DV +N ++ +C +R+ +EM + +TPN + + +IS G
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 360 AFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
+ ++ M K P + Y ++ + + D AMK+ K + + P T++++I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVL 464
LC+ G A +L MI + + P+ TF + + EK +VL
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVL 418
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 50/416 (12%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
A FF++ R R + +T + +I R+ + + + KM + + LN+ +F I++
Sbjct: 90 AIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRF 197
+ + HK+ ++ TF + K ++ FN LL LC + +A +F M G
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 198 E--------------PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
E P + T++ L+ G + + +A +MV G DVV+YG +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
+ +CK G A+ ++ M++ + P IYS ++ + DA F EM KGI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+V YN +I FC ++ + +R+L++M + P+ T N +IS+ + +G+ A ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 364 FRRMIKIC-EPDADTYTMMIKMFCERNEMDMA---------------------------- 394
M+ C PD TY MI FC+ N D A
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 395 ---MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
M++ +++ + V + T++ LI+G C+ N A L +EMI G+ P +T
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 177/368 (48%), Gaps = 8/368 (2%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
V Y +I+ L + + + ++M KG+ NV T+ ++ + + +A
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDP 215
M + E+ ++ FN L+SA K + +A+++ D M R PD TY+ ++ G+ K
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
A+ F M S PDVV++ ++D+ C+A RVDE +++++++ + + Y+
Sbjct: 416 RFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
L+H + + + A D F EM G+ D + N L+ FC+ K + + + ++ +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMA 394
+ ++ N+II + + D A+++F + I EPD TY +MI FC ++ + A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
++ MK P T++ LI G + G K+ L+ EM G T K+
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVAD 650
Query: 455 LIKEKRED 462
LI + R D
Sbjct: 651 LITDGRLD 658
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V TF ++ Y RA +VDE + + + + N +N L+ C+ N+ AQ++F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M PD T +ILL G+ ++ L +A E F + + D V+Y I++ +CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
+VDEA ++ + + P Y+V++ + ++ I DA F +M+ G + D Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
N LI KA + ++ EM SNG + ++ T +++ LI+ GR D++F
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 661
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 16/199 (8%)
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
NR + AI + +ME + I ++ +N LI FC +K ++ G P+ T
Sbjct: 120 NRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTF 179
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKI----------------CEPDADTYTMMIKMFCER 388
N ++ L + R A +F M++ P T+ +I C
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ A + M K + T+ ++NG+C+ G+ A LL +M E I+P V +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 449 GKLRQLLIKEKREDVLTFL 467
+ L K+ +L
Sbjct: 300 SAIIDRLCKDGHHSDAQYL 318
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 208/494 (42%), Gaps = 28/494 (5%)
Query: 4 ICNPRKKLLCKFV-----SFARMLSTGEPPPQ-EVADLTETVCKVMMSSPGVTLDAALNQ 57
IC + L C + +++ ML+ G + V+ T +C ++ +
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 58 TGVRASPELVENVLKRFENAGMSAFRFFEWAERQRN-YAHTVRAYHLMIESLARIRQYQI 116
G VL NA F + E +R V Y +M++S + +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 117 MWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLS 175
+MR G NV T+ ++ Y +A KV A F M N+ ++ L+
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 176 ALCKSRNVRKAQEIFDSMKGRFE-----------------PDLKTYSILLEGWGKDPNLP 218
CK+ V KA +IF+ M G + P++ TY LL+G+ K +
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+AR+ M GC P+ + Y ++D LCK G++DEA EV +M ++ T + YS L+
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
Y R + A +M +VV+Y +I CK K ++++ ME G
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKI 397
PN T +I G+ + E+ RM K P+ TY ++I C+ +D+A +
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
++MK + + +I G N +++ LL+E+ + P + L LIK
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894
Query: 458 EKREDVLTFLHEKI 471
+R ++ L E++
Sbjct: 895 AQRLEMALRLLEEV 908
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 183/447 (40%), Gaps = 42/447 (9%)
Query: 55 LNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQY 114
L Q + S LV VL+ + FF WA RQ Y HT Y+ +++ + R
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPS-AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE 181
Query: 115 QIMWDIVTKMRNKGMLNVETFC-IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGL 173
++ + + ++R+ F +++RK+ R A+ + + + + +N L
Sbjct: 182 KVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCL 241
Query: 174 LSALCKSRNVRKAQEIFDSMK---------------------GR------------FEPD 200
+ A K+ + A I M G+ F PD
Sbjct: 242 IQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPD 301
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
Y+ L+ G + +A + M + C P+VV+Y ++ ++ V+
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
M C P+ I++ LVH Y A +M + G VVYN LIG+ C
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 321 KFKN------VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEP 373
N + EM + GV N + L S G+ ++AF V R MI + P
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
D TY+ ++ C ++M++A ++++MK V ++T++ +++ C+ G +A
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 434 EEMIEKGIRPSRVTFGKLRQLLIKEKR 460
EM E G P+ VT+ L +K K+
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKK 568
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 126/300 (42%), Gaps = 41/300 (13%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y +I+ L ++ + ++ T+M G + T+ ++ +Y + + D A + M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLP 218
+ N+ + ++ LCK +A ++ M+ + +P++ TY+ +++G+G +
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD------------------------- 253
E M S G +P+ V+Y +++D CK G +D
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 254 --------EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
E++ ++ ++ ++ P +Y +L+ R+E A+ E+ A
Sbjct: 857 EGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSAT 914
Query: 306 VV----VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
+V YN+LI + C ANK + ++ EM GV P ++ +I L + A
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 133/311 (42%), Gaps = 8/311 (2%)
Query: 25 GEPPPQEVAD-LTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFR 83
G P Q V D L + +CKV + +++ G A+ +++ R+
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 84 FFEWAERQRNY-AHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRK 141
++ N A V Y MI+ L ++ + + ++ M KG NV T+ ++
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEP-D 200
+ K++ + M V N + L+ CK+ + A + + MK P
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
Y ++EG+ K+ ++ E+ +P + Y +++D L KA R++ A+ +++
Sbjct: 849 TAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 261 DMD--DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
++ + S Y+ L+ + + N++E A F EM +KG+ ++ + +LI +
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966
Query: 319 ANKFKNVRRVL 329
+K +L
Sbjct: 967 NSKISEALLLL 977
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 50/416 (12%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
A FF++ R R + +T + +I R+ + + + KM + + LN+ +F I++
Sbjct: 90 AIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRF 197
+ + HK+ ++ TF + K ++ FN LL LC + +A +F M G
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 198 E--------------PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
E P + T++ L+ G + + +A +MV G DVV+YG +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
+ +CK G A+ ++ M++ + P IYS ++ + DA F EM KGI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+V YN +I FC ++ + +R+L++M + P+ T N +IS+ + +G+ A ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 364 FRRMIKIC-EPDADTYTMMIKMFCERNEMDMA---------------------------- 394
M+ C PD TY MI FC+ N D A
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 395 ---MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
M++ +++ + V + T++ LI+G C+ N A L +EMI G+ P +T
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 183/379 (48%), Gaps = 8/379 (2%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
V Y +I+ L + + + ++M KG+ NV T+ ++ + + +A
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDP 215
M + E+ ++ FN L+SA K + +A+++ D M R PD TY+ ++ G+ K
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
A+ F M S PDVV++ ++D+ C+A RVDE +++++++ + + Y+
Sbjct: 416 RFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
L+H + + + A D F EM G+ D + N L+ FC+ K + + + ++ +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMA 394
+ ++ N+II + + D A+++F + I EPD TY +MI FC ++ + A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
++ MK P T++ LI G + G K+ L+ EM G T ++
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEI 651
Query: 455 LIKEKREDVL-TFLHEKIN 472
+ + E+++ +L KIN
Sbjct: 652 ICRVSDEEIIENYLRPKIN 670
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 16/199 (8%)
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
NR + AI + +ME + I ++ +N LI FC +K ++ G P+ T
Sbjct: 120 NRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTF 179
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKI----------------CEPDADTYTMMIKMFCER 388
N ++ L + R A +F M++ P T+ +I C
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ A + M K + T+ ++NG+C+ G+ A LL +M E I+P V +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 449 GKLRQLLIKEKREDVLTFL 467
+ L K+ +L
Sbjct: 300 SAIIDRLCKDGHHSDAQYL 318
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 187/409 (45%), Gaps = 39/409 (9%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
AF F+ E QR + AY +I+ + + + ++ +KG+ L+V F +
Sbjct: 305 AFDLFKVME-QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FE 198
Y ++ + A + M + N+ + L+ LC+ + +A ++ + R E
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG-------- 250
P + TYS L++G+ K NL + +M+ G PDVV YG++VD L K G
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 251 ---------------------------RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
R DEA++V + M P ++ ++ +
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
E R+E+A+ F M + G++ D + Y LI AFCK K ++ M+ N ++ +
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
CNV+I L R + A + F +I+ EPD TY MI +C +D A +I++ +K
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
F P+ T + LI+ LC+N + A + M EKG +P+ VT+G L
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 182/434 (41%), Gaps = 40/434 (9%)
Query: 15 FVSFARMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKR 73
F + ++L G EP + L + CK G L + + G + ++
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 74 FENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML- 130
G+ A RF Q + V ++ +I+ R+ ++ + M G+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVV-VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V TF VMR +++EA++ F M K + + A+ L+ A CK ++F
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 191 DSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
D M + + D+ ++++ K + A + F ++ PD+V+Y M+ C
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
R+DEA + + + P + ++L+H N ++ AI F M KG K + V Y
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
L+ F K+ + ++ +EM+ G++P S++S
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISP----------SIVS---------------- 743
Query: 370 ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
Y+++I C+R +D A I+ + +P + ++ LI G C+ G ++A
Sbjct: 744 --------YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 430 CVLLEEMIEKGIRP 443
+L E M+ G++P
Sbjct: 796 ALLYEHMLRNGVKP 809
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 3/309 (0%)
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDP 215
V+D P N+ F L++ CK + +A ++F M+ R EPDL YS L++G+ K
Sbjct: 277 VLDCGPAP-NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
L + F + + G DVV + +D+ K+G + A V K M P Y+
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
+L+ + RI +A + ++ ++G++ +V Y++LI FCK ++ + ++M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMA 394
G P+ V++ L QG A +M+ + + + +I +C N D A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+K+++ M P + TF+ ++ G +A L M + G+ P + + L
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 455 LIKEKREDV 463
K + +
Sbjct: 576 FCKHMKPTI 584
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 3/290 (1%)
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKGRFEPDLKTYSILLEGWGKDPNLPKARE 222
P ++A +L AL V KA + M+ F + + + +L+G D + A
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASR 272
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
++ G +P+VV++ +++ CK G +D A ++ K M+ P YS L+ Y
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
+ F + KG+K DVVV+++ I + K+ V K M G++PN
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T ++I L GR AF ++ +++K EP TY+ +I FC+ + +++DM
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ P + + L++GL + G + A +M+ + IR + V F L
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 181/416 (43%), Gaps = 43/416 (10%)
Query: 70 VLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTK-----M 124
VL E+ SA ++F WAE H++I + M+D+ K +
Sbjct: 75 VLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNG--------MFDVADKVFDEMI 126
Query: 125 RNKG------------MLNVETFCIVMRKYARAHKVDEA--VYTFNVMDKYEVPQNLAAF 170
N+G L+ + +M R VD+A ++ ++ +PQ+ +
Sbjct: 127 TNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQD--SV 184
Query: 171 NGLLSALCKSRNVRKAQEIFDSM-KGRFEPD-LKTYSILLEGWGKDPNLPKARETFREMV 228
+L++L S V + FD + +G EP + + +L+ + KA + R ++
Sbjct: 185 YRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVM 244
Query: 229 SAGCSPDVVS-----YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
G +VS G+ VD +++ A ++ + D P + L++ +
Sbjct: 245 ERGFRVGIVSCNKVLKGLSVD------QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCK 298
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
++ A D F ME++GI+ D++ Y+ LI + KA ++ + GV +
Sbjct: 299 RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVV 358
Query: 344 CNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+ I + G A V++RM+ + P+ TYT++IK C+ + A ++ +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
+ PS+ T+S+LI+G C+ GN L E+MI+ G P V +G L L K+
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 139/300 (46%), Gaps = 12/300 (4%)
Query: 43 MMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYH 102
+M G+ D A T +R S ++E R E A FR F+ AY
Sbjct: 521 LMGIYGIKPDVATFTTVMRVS--IMEG---RLEEALFLFFRMFKMGLEP-----DALAYC 570
Query: 103 LMIESLARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
+I++ + + I + M RNK ++ +V+ + H++++A FN + +
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKA 220
++ ++ +N ++ C R + +A+ IF+ +K F P+ T +IL+ K+ ++ A
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHT 280
F M G P+ V+YG ++D K+ ++ + ++ ++M + P+ YS+++
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 281 YGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
R+++A + F + + DVV Y LI +CK + + + M NGV P+
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ T+ ++ Y ++DEA F ++ N L+ LCK+ ++ A +F
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 191 DSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
M KG +P+ TY L++ + K ++ + + F EM G SP +VSY I++D LCK
Sbjct: 695 SIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
GRVDEA + D +P Y++L+ Y R+ +A + M R G+K D ++
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
Query: 309 YNAL 312
AL
Sbjct: 814 QRAL 817
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 178/378 (47%), Gaps = 9/378 (2%)
Query: 104 MIESLARIRQYQIMWDIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
++ L R R +++ + KM +N + ++ Y + K A +M K
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKAR 221
N+ N LL LC++ KA + M+ PD+ +Y+ ++ G+ + L KA
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
E EM +GCS +V++GI++D CKAG++DEA+ +K+M +Y+ L+ +
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
++ F E+ +G + YN LI FCK + K + + M GV PN
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T +I L G+T A ++ MI K EP+A TY ++I C+ + A++I +
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG--IRPSRVTFGKLRQLLIKE 458
MK +R P T++ L+ GLC G+ +A LL M++ P +++ L L KE
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 459 KR----EDVLTFLHEKIN 472
R D+ L EK+
Sbjct: 438 NRLHQALDIYDLLVEKLG 455
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 190/387 (49%), Gaps = 5/387 (1%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKV 148
R+ + V +Y+ +I ++ + ++ +M+ G ++ T+ I++ + +A K+
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE-PDLKTYSIL 207
DEA+ M + +L + L+ C + + + +FD + R + P TY+ L
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ G+ K L +A E F M+ G P+V +Y ++D LC G+ EA++++ M + +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P + Y+++++ + + DA++ M+++ + D + YN L+G C +
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 328 VLKEM--ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKM 384
+L M +S+ P+ + N +I L + R +A +++ ++ K+ D T +++
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+ +++ AM++WK + + V + T++A+I+G C+ G A LL +M ++PS
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 445 RVTFGKLRQLLIKEKREDVLTFLHEKI 471
+ L L KE D L E++
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 174/377 (46%), Gaps = 5/377 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y+ +I ++ Q + +I M +G+ NV T+ ++ K EA+ N+M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ + N +N +++ LCK V A EI + MK R PD TY+ILL G +L
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 218 PKARETFREMV--SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+A + M+ S+ PDV+SY ++ LCK R+ +A+++ + + +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
+L+++ + A++ + ++ I + Y A+I FCK + +L +M +
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMA 394
+ P+ N ++SSL +G D+A+ +F M + PD ++ +MI + ++ A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+ M P L T+S LIN + G +A ++M++ G P + +
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Query: 455 LIKEKREDVLTFLHEKI 471
I + D LT L +K+
Sbjct: 644 CISQGETDKLTELVKKL 660
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 4/298 (1%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVM--DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
T+ I++ +DEA +M D ++ ++N L+ LCK + +A +I+D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 192 SMKGRFEP-DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
+ + D T +ILL K ++ KA E ++++ + + +Y M+D CK G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++ A ++ M + P+ F Y+ L+ + E ++ A F EM+R DVV +N
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
+I KA K+ +L M G++P+ T + +I+ + G D A F +M+
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628
Query: 371 C-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
EPDA ++K + E D ++ K + K V +++ +C + M
Sbjct: 629 GFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANM 686
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 129/272 (47%), Gaps = 3/272 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V ++ ++ + +++ +A+ ++++ + + N LL++ K+ +V KA E++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 191 DSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+ + + TY+ +++G+ K L A+ +M + P V Y ++ LCK
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G +D+A + ++M +N P +++++ I+ A + M R G+ D+ Y
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI- 368
+ LI F K +M +G P++ C+ ++ ISQG TD+ E+ ++++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 369 -KICEPDADTYTMMIKMFCERNEMDMAMKIWK 399
I T T+M M MD+A ++ +
Sbjct: 663 KDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 201/433 (46%), Gaps = 28/433 (6%)
Query: 30 QEVADLTETVCKVMMSSPGVT-LDAALNQTGVRASPELVENVL---KRFENAGMSAFRFF 85
Q L +T+C++M + T L ++ LV NVL K+ E+A +FF
Sbjct: 82 QNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHA----LQFF 137
Query: 86 EWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYAR 144
W ER H + MI+ L + + I+ M KG+ + + F +++ Y +
Sbjct: 138 RWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGK 197
Query: 145 AHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKT 203
A V E+V F M V + + ++N L + + A+ F+ M EP T
Sbjct: 198 AGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHT 257
Query: 204 YSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD 263
Y+++L G+ L A F +M + G SPD ++ M++ C+ ++DEA ++ +M
Sbjct: 258 YNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMK 317
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
N P+ Y+ ++ Y +R++D + F EM GI+ + Y+ L+ C A K
Sbjct: 318 GNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMV 377
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQ---GRTDRAFEVFRRMIKICEP-DADTYT 379
+ +LK M + + P + ++ + L+SQ G A EV + M + P +A Y
Sbjct: 378 EAKNILKNMMAKHIAP--KDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYG 435
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFV----------PSLHTFSALINGLCQNGNAMKA 429
++I+ C+ + + A+K+ + K + PS ++ +I LC NG KA
Sbjct: 436 VLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKA 493
Query: 430 CVLLEEMIEKGIR 442
VL +++++G++
Sbjct: 494 EVLFRQLMKRGVQ 506
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 178/378 (47%), Gaps = 17/378 (4%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNV-ETFCIVMRKYARAHKVDEAVYTF 155
T+++Y+ + + + R +Y + KM ++G+ T+ +++ + + +++ A+ F
Sbjct: 219 TIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 278
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKD 214
M + + A FN +++ C+ + + +A+++F MKG + P + +Y+ +++G+
Sbjct: 279 EDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAV 338
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT-SFI 273
+ F EM S+G P+ +Y ++ LC AG++ EA ++K+M + P + I
Sbjct: 339 DRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI 398
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR------ 327
+ L+ + + A + M + A+ Y LI CKA+ + +
Sbjct: 399 FLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLI 458
Query: 328 ----VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIK 383
+L+ ++ + P++ N II L + G+T +A +FR+++K D D +I+
Sbjct: 459 EKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIR 516
Query: 384 MFCERNEMDMAMKIWKDMKSKRFVP-SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
+ D + +I K M S+R VP + + LI G A L+ M+E G
Sbjct: 517 GHAKEGNPDSSYEILKIM-SRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHV 575
Query: 443 PSRVTFGKLRQLLIKEKR 460
P F + + L ++ R
Sbjct: 576 PDSSLFRSVIESLFEDGR 593
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D + +L+E +GK + ++ + F++M G + SY + ++ + GR A
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
M PT Y++++ + + R+E A+ F +M+ +GI D +N +I FC+
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYT 379
K ++ EM+ N + P S++S YT
Sbjct: 304 KKMDEAEKLFVEMKGNKIGP----------SVVS------------------------YT 329
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
MIK + + +D ++I+++M+S P+ T+S L+ GLC G ++A +L+ M+ K
Sbjct: 330 TMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
Query: 440 GIRP 443
I P
Sbjct: 390 HIAP 393
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
M+ +L + +++ A ++ DM + ++ VL+ +YG +++++ F +M+ G
Sbjct: 156 MIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLG 215
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
++ + YN+L + ++ +R +M S GV P T N+++ R + A
Sbjct: 216 VERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETAL 275
Query: 362 EVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
F M + PD T+ MI FC +MD A K++ +MK + PS+ +++ +I G
Sbjct: 276 RFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ EEM GI P+ T+ L
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKG-IKADVVVYNALIGAFCKANKFKNVRRVL 329
S +Y+VL +G + ++E A+ F ER G I+ D + +I + +K + R +L
Sbjct: 118 SLVYNVL---HGAK-KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCIL 173
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCER 388
+M GV + V+I S G + ++F++M + E +Y + K+ R
Sbjct: 174 LDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRR 233
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
MA + + M S+ P+ HT++ ++ G + A E+M +GI P TF
Sbjct: 234 GRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATF 293
Query: 449 GKL 451
+
Sbjct: 294 NTM 296
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 9/375 (2%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLM--IESLARIRQYQIMWDIVTKMRNKGMLNVETFCIV 138
A F + + Y T H++ + L RI + + + +M K NV TF I+
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKS--NVYTFNIM 231
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-F 197
+ + K+ +A +M+ + + + +N L+ + A+ I MK + F
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
+PD++TY+ +L W N +A E REM G PD VSY I++ G ++ A
Sbjct: 292 QPDMQTYNPIL-SWM--CNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+M +PT + Y+ L+H +EN+IE A E+ KGI D V YN LI +C
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDAD 376
+ K + EM ++G+ P T +I L + +T A E+F +++ K +PD
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
++ C MD A + K+M P T++ L+ GLC G +A L+ EM
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 437 IEKGIRPSRVTFGKL 451
+GI+P +++ L
Sbjct: 529 KRRGIKPDHISYNTL 543
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 190/405 (46%), Gaps = 9/405 (2%)
Query: 62 ASPELVENVLKRFENAGMSAFR--FFEWA-ERQRNYAHTVRAYHLMIESLARIRQYQIMW 118
+SP+ V +LK + ++ R F E R + + L++ ++R
Sbjct: 116 SSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAI 175
Query: 119 DIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
+ M+ KG ET ++ +R ++++ A + M + E+ N+ FN +++ L
Sbjct: 176 ECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVL 235
Query: 178 CKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
CK ++KA+ M+ +P + TY+ L++G+ + AR EM S G PD+
Sbjct: 236 CKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDM 295
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
+Y ++ +C GR A EV+++M + +P S Y++L+ +E A E
Sbjct: 296 QTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M ++G+ YN LI NK + +++E+ G+ +S T N++I+ G
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 357 TDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
+AF + M+ +P TYT +I + C +N+ A ++++ + K P L +
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
L++G C GN +A LL+EM I P VT+ L + L E +
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 9/337 (2%)
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
+ RK + + DE V D+ E + F+ L+ C+ R V +A E F MK +
Sbjct: 129 VTSRKNSIRNLFDELVLAH---DRLETKSTIL-FDLLVRCCCQLRMVDEAIECFYLMKEK 184
Query: 197 -FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
F P +T + +L + + A + +M +V ++ IM+++LCK G++ +A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
+ M+ PT Y+ LV + + RIE A EM+ KG + D+ YN ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPD 374
C + VL+EM+ G+ P+S + N++I + G + AF M+K P
Sbjct: 305 MCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
TY +I N+++ A + ++++ K V T++ LING CQ+G+A KA L +
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 435 EMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
EM+ GI+P++ T+ L +L ++ + L EK+
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 171/358 (47%), Gaps = 12/358 (3%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
T+ Y+ +++ + + + I+++M++KG +++T+ ++ + E +
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE- 317
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M + + + ++N L+ + ++ A D M K P TY+ L+ G +
Sbjct: 318 --MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+ A RE+ G D V+Y I+++ C+ G +A + +M + PT F Y
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L++ +N+ +A + F ++ KG+K D+V+ N L+ C +LKEM+
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVF----RRMIKICEPDADTYTMMIKMFCERNE 390
+ P+ T N ++ L +G+ + A E+ RR IK PD +Y +I + ++ +
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK---PDHISYNTLISGYSKKGD 552
Query: 391 MDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
A + +M S F P+L T++AL+ GL +N A LL EM +GI P+ +F
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 3/305 (0%)
Query: 119 DIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
+++ +M+ G++ + ++ I++R + ++ A + M K + +N L+ L
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 178 CKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
+ A+ + ++ + D TY+IL+ G+ + + KA EM++ G P
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
+Y ++ +LC+ + EA E+ + + P + + L+ + ++ A E
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M+ I D V YN L+ C KF+ R ++ EM+ G+ P+ + N +IS +G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 357 TDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
T AF V M+ + P TY ++K + E ++A ++ ++MKS+ VP+ +F +
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 416 LINGL 420
+I +
Sbjct: 613 VIEAM 617
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 182/383 (47%), Gaps = 13/383 (3%)
Query: 82 FRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMR------NKGMLNVETF 135
F F WA + H ++ M SLA ++ ++ +++ + + G+ +
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPEL 156
Query: 136 CIVMRK----YARAHKVDEAVYTFNVMDKY-EVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+ R Y RA K+D A+ F+ M + + N+ +N +++ KS ++ KA +
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 191 DSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M K R +PD+ T++IL+ G+ + A + FREM GC P+VVS+ ++ +
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G+++E V++ +M + C + +LV E R++DA L++ K + Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+L+ C NK +++E+ G TP C ++ L GRT++A +M+
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 370 I-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
PD+ T+ ++++ C + A ++ SK + P T+ L++G + G +
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 429 ACVLLEEMIEKGIRPSRVTFGKL 451
VL+ EM++K + P T+ +L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRL 479
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 243 VDILCKAGRVDEAV---EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
+D C+A ++D A+ + +K + D P +Y+ +V+ Y ++ A+ + M +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
+ K DV +N LI +C+++KF + +EM+ G PN + N +I +S G+ +
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 360 AFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
++ MI++ C T +++ C +D A + D+ +KR +PS + +L+
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
LC A++A ++EE+ +KG P + L + L K R + + EK+
Sbjct: 342 KLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 308 VYNALIGAFCKANK-------FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
++ + I A+C+A K F ++R++ PN N +++ + G D+A
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDG------KPNVGVYNTVVNGYVKSGDMDKA 212
Query: 361 FEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
++RM K +PD T+ ++I +C ++ D+A+ ++++MK K P++ +F+ LI G
Sbjct: 213 LRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRG 272
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED-----VLTFLHEKI 471
+G + + EMIE G R S T L L +E R D VL L++++
Sbjct: 273 FLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 44/287 (15%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
A RF++ ++R V ++++I R ++ + D+ +M+ KG NV +F ++
Sbjct: 212 ALRFYQRMGKERAKP-DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 140 RKYARAHKVDEAV------------------------------------YTFNVMDKYEV 163
R + + K++E V ++++K +
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL 330
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDPNLPKAR 221
P + L+ LC +A E+ + + KG+ P + L+EG K KA
Sbjct: 331 PSEFD-YGSLVEKLCGENKAVRAMEMMEELWKKGQ-TPCFIACTTLVEGLRKSGRTEKAS 388
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
+M++AG PD V++ +++ LC + +A + P Y VLV +
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF--KNVR 326
E R ++ EM K + D+ YN L+ KF K VR
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVR 495
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 172/387 (44%), Gaps = 39/387 (10%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFC-IVMRKYARAHKVDEAVYTFNVM 158
+Y LM+ R + Q +T M +G + C +++ V+ A++ F M
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM------------------------- 193
NL F L+ LCK ++++A E+ + M
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 194 ------------KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
++P++ TY+ ++ G+ K+ L +A F M G P+V +Y
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
+++ CKAG A E++ M D MP + Y+ + + ++R +A + + G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
++AD V Y LI CK N M G + R N++I++ Q + +
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 362 EVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
+F+ ++ + P +TYT MI +C+ ++D+A+K + +MK VP T+ +LI+GL
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVT 447
C+ +AC L E MI++G+ P VT
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVT 605
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 9/310 (2%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMK--GRFEPDLKTYSILLEGWGKDPNLPKARET 223
N+ + ++ CK + +A+ +F MK G F P++ TY+ L+ G K + +A E
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF-PNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
M G P++ +Y +D LCK R EA E++ Y++L+
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
+N I A+ F M + G +AD+ + N LI AFC+ K K R+ + + S G+ P T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+IS +G D A + F M + C PD+ TY +I C+++ +D A K+++ M
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 595
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK-GIRPSRVTFGKLRQLLIKEKRE 461
+ P T L C+ ++ A +LLE + +K IR R K L EK+
Sbjct: 596 DRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRK----LCSEKKV 651
Query: 462 DVLTFLHEKI 471
V +K+
Sbjct: 652 GVAALFFQKL 661
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 184/422 (43%), Gaps = 55/422 (13%)
Query: 43 MMSSPG-VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAY 101
++SSP V LD N + +V ++ E+ M A FF WA + H +R Y
Sbjct: 73 VVSSPHRVNLDFDANSLTHEQAITVVASLAS--ESGSMVALCFFYWAVGFEKFRHFMRLY 130
Query: 102 HLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
+ +SL Q +++ M +R ++ +++EAV M
Sbjct: 131 LVTADSLLANGNLQKAHEVMRCM--------------LRNFSEIGRLNEAVGMVMDMQNQ 176
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKA 220
+ + N +L + + A+ +FD M R PD +Y +++ G +D + +A
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHT 280
M+ G PD + +++ LC+ G V+ A+ + M D
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID---------------- 280
Query: 281 YGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
G K +++ + +LI CK K +L+EM NG PN
Sbjct: 281 -------------------LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIW 398
T +I L +G T++AF +F ++++ +P+ TYT MI +C+ ++++ A ++
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLF 381
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
MK + P+++T++ LING C+ G+ +A L+ M ++G P+ T+ L K+
Sbjct: 382 SRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 441
Query: 459 KR 460
R
Sbjct: 442 SR 443
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 109/226 (48%), Gaps = 5/226 (2%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFN 156
+ Y+ I+SL + + ++++ K + G+ + T+ I++++ + + +++A+ F
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDP 215
M+K ++ N L++A C+ + +++++ +F + P +TY+ ++ + K+
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
++ A + F M GC PD +YG ++ LCK VDEA ++ + M D P
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 607
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
L + Y N D+ +A + +E K + L+ C K
Sbjct: 608 TLAYEYCKRN---DSANAMILLEPLDKKLWIRTVRTLVRKLCSEKK 650
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 163/336 (48%), Gaps = 4/336 (1%)
Query: 118 WDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSA 176
W+++ M++ G+ ++ F + + K +A + EA + + + Q+ + + ++
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 177 LCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
CK +A ++ S R P++ YS L ++ +A F+E+ G PD
Sbjct: 351 FCKVGKPEEAIKLIHSF--RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
V Y M+D C GR D+A + + + P+ ++L+ I DA F
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M+ +G+K DVV YN L+ + K ++ V ++ EM S G++P+ T N++I S++ +G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 357 TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
D A E+ +I + P +T +I F +R + A +W M R P + T SA
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
L++G C+ KA VL ++++ G++P V + L
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPD 200
Y + D+A F + K P +L L+ A + ++ A+ +F +MK + D
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
+ TY+ L+ G+GK L K E EM SAG SPDV +Y I++ + G +DEA E++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
++ +P++ ++ ++ + ++A + M +K DVV +AL+ +CKA
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+ + + ++ G+ P+ N +I S G ++A E+ M++
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 163/336 (48%), Gaps = 4/336 (1%)
Query: 118 WDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSA 176
W+++ M++ G+ ++ F + + K +A + EA + + + Q+ + + ++
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 177 LCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
CK +A ++ S R P++ YS L ++ +A F+E+ G PD
Sbjct: 351 FCKVGKPEEAIKLIHSF--RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
V Y M+D C GR D+A + + + P+ ++L+ I DA F
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M+ +G+K DVV YN L+ + K ++ V ++ EM S G++P+ T N++I S++ +G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 357 TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
D A E+ +I + P +T +I F +R + A +W M R P + T SA
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
L++G C+ KA VL ++++ G++P V + L
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPD 200
Y + D+A F + K P +L L+ A + ++ A+ +F +MK + D
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
+ TY+ L+ G+GK L K E EM SAG SPDV +Y I++ + G +DEA E++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
++ +P++ ++ ++ + ++A + M +K DVV +AL+ +CKA
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+ + + ++ G+ P+ N +I S G ++A E+ M++
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 199/435 (45%), Gaps = 48/435 (11%)
Query: 69 NVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRN 126
+++K +++G A FEW N + ++ H +IE RI + + + K+ +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSN-SGALKLDHQVIEIFVRILGRESQYSVAAKLLD 199
Query: 127 K-----GMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK-S 180
K +L+V + ++ Y+R K ++A+ F M + L +N +L K
Sbjct: 200 KIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG 259
Query: 181 RNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSY 239
R+ RK + D M+ + + D T S +L ++ L +A+E F E+ S G P V+Y
Sbjct: 260 RSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTY 319
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNC-------------------------------- 267
++ + KAG EA+ V+K+M++N+C
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 268 ---MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN 324
MP + Y+ ++ YG + ++A+ F M+ G + YNA++ K ++
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Query: 325 VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYTMMI 382
+ ++L +M+SNG +PN T N +++ ++G VFR M K C EPD DT+ +I
Sbjct: 440 MIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLI 498
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
+ A K++ +M F + T++AL+N L + G+ ++ +M KG +
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 443 PSRVTFGKLRQLLIK 457
P+ ++ + Q K
Sbjct: 559 PTETSYSLMLQCYAK 573
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 194/471 (41%), Gaps = 76/471 (16%)
Query: 53 AALNQTGVRASPELVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLAR 110
A L G +L+ F AG+ A + E A +V Y+ ++ + R
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV-TYNELVAAYVR 363
Query: 111 IRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAA 169
+ ++ M KG M N T+ V+ Y +A K DEA+ F M + N
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 170 FNGLLS----------------------------------ALCKSRNVRK-AQEIFDSMK 194
+N +LS ALC ++ + K +F MK
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK 483
Query: 195 G-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
FEPD T++ L+ +G+ + A + + EM AG + V +Y +++ L + G
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 543
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYG----------VENRIEDAI------------ 291
V+ DM PT YS+++ Y +ENRI++
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 292 -------------DAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
AF ++ G K D+V++N+++ F + N + +L+ + +G++
Sbjct: 604 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKI 397
P+ T N ++ + +G +A E+ + + K +PD +Y +IK FC R M A+++
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+M + P + T++ ++G G + ++E M + RP+ +TF
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTF 774
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 121/308 (39%), Gaps = 37/308 (12%)
Query: 133 ETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS 192
+TF ++ Y R +A + M + + +N LL+AL + + R + +
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 193 MKGR-FEPDLKTYSILLEGWGKDPN----------------------------------- 216
MK + F+P +YS++L+ + K N
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L + F G PD+V + M+ I + D+A +++ + ++ P Y+
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+ Y A + +E+ +K D+V YN +I FC+ + R+L EM G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAM 395
+ P T N +S + G +V M K C P+ T+ M++ +C + AM
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 396 KIWKDMKS 403
+K+
Sbjct: 792 DFVSKIKT 799
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 129/281 (45%), Gaps = 3/281 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVET-FCIVMRKYARAHKVDEAVYTFN 156
V Y+ ++ +LAR ++ ++++ M++KG ET + ++++ YA+ N
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDP 215
+ + ++ + LL A K R + ++ F K ++PD+ ++ +L + ++
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+A + G SPD+V+Y ++D+ + G +A E++K ++ + P Y+
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
++ + +++A+ EM +GI+ + YN + + F + V++ M N
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD 376
PN T +++ G+ A + F IK +P D
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMD-FVSKIKTFDPCFD 805
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 22/310 (7%)
Query: 171 NGLLSALCKSRNV----------RKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPK 219
NG L LCK V FDS+K DL + L++G + +
Sbjct: 98 NGSLKLLCKKEVVLVNSIVEQPLTGLSRFFDSVKSELLRTDLVS---LVKGLDDSGHWER 154
Query: 220 ARETFREMV----SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
A F +V S D I V IL + + A +++ + + Y+
Sbjct: 155 AVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYT 214
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK-FKNVRRVLKEMES 334
++H Y + E AID F M+ G +V YN ++ F K + ++ + VL EM S
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYTMMIKMFCERNEMD 392
G+ + TC+ ++S+ +G A E F + K C EP TY ++++F +
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
A+ + K+M+ T++ L+ + G + +A ++E M +KG+ P+ +T+ +
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 453 QLLIKEKRED 462
K +ED
Sbjct: 394 DAYGKAGKED 403
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 188/397 (47%), Gaps = 40/397 (10%)
Query: 92 RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDE 150
+ ++ V Y+ +I L + +Y+ ++ +M G+ + T+ ++ + + V E
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLE 209
F+ M +V +L F+ ++S +S N+ KA F+S+K PD Y+IL++
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
G+ + + A EM+ GC+ DVV+Y ++ LCK + EA ++ +M + P
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
S+ ++L+ + +++A++ F +M+ K I+ DVV YN L+ F K + +
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK--------ICE--------- 372
+M S + P + ++++++L S+G AF V+ MI IC
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 373 -------------------PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR--FVPSLH 411
PD +Y +I F M A + K M+ ++ VP +
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
T++++++G C+ +A V+L +MIE+G+ P R T+
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 157/313 (50%), Gaps = 4/313 (1%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK 194
+ I+++ Y R + A+ N M + ++ +N +L LCK + + +A ++F+ M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 195 GR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
R PD T +IL++G K NL A E F++M DVV+Y ++D K G +D
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
A E+ DM +PT YS+LV+ + + +A + EM K IK V++ N++I
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK---I 370
+C++ + L++M S G P+ + N +I + + +AF + ++M +
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 371 CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
PD TY ++ FC +N+M A + + M + P T++ +ING N +A
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 431 VLLEEMIEKGIRP 443
+ +EM+++G P
Sbjct: 713 RIHDEMLQRGFSP 725
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 137/308 (44%), Gaps = 39/308 (12%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y ++I+ R + ++ +M +G ++V T+ ++ + + EA FN M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLP 218
+ + + L+ CK N++ A E+F MK R D+ TY+ LL+G+GK ++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI----- 273
A+E + +MVS P +SY I+V+ LC G + EA V +M N PT I
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 274 ------------------------------YSVLVHTYGVENRIEDAIDAF--LEMERKG 301
Y+ L++ + E + A +E E+ G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
+ DV YN+++ FC+ N+ K VL++M GV P+ T +I+ +SQ AF
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 362 EVFRRMIK 369
+ M++
Sbjct: 713 RIHDEMLQ 720
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 171/404 (42%), Gaps = 22/404 (5%)
Query: 60 VRASPELVENVLKRFENAGMSAFRFF-EWAERQRNYAHTVRAYHLMIESLARIRQYQIMW 118
+R +P V VL R N RF + N+ HT + MI L R +
Sbjct: 74 IRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQ 133
Query: 119 DIVTKM-RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
+ +M R G+ +R V+ TF+ N + F+ L+
Sbjct: 134 SCLLRMIRRSGV-------------SRLEIVNSLDSTFS-----NCGSNDSVFDLLIRTY 175
Query: 178 CKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
++R +R+A E F ++ + F + + L+ + + A ++E+ +G +V
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
+ IMV+ LCK G++++ + + + P Y+ L+ Y + +E+A +
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M KG V YN +I CK K++ + V EM +G++P+S T ++ +G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 357 TDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
+VF M + PD ++ M+ +F +D A+ + +K +P ++
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
LI G C+ G A L EM+++G VT+ + L K K
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 117/244 (47%), Gaps = 4/244 (1%)
Query: 103 LMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
++I+ ++ Q ++ KM+ K + L+V T+ ++ + + +D A + M
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKA 220
E+ +++ L++ALC ++ +A ++D M + +P + + +++G+ + N
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDD--NNCMPTSFIYSVLV 278
+M+S G PD +SY ++ + + +A +VK M++ +P F Y+ ++
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
H + +N++++A +M +G+ D Y +I F + R+ EM G +
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 339 PNSR 342
P+ +
Sbjct: 725 PDDK 728
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 173/359 (48%), Gaps = 6/359 (1%)
Query: 95 AHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVY 153
+ +V +Y +I + R +Y+ +++ +M+N+ + ++ T+ V+ AR E +
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLL 232
Query: 154 T-FNVMDKYEVPQNLAAFNGLLSALCKSRNV-RKAQEIFDSMK-GRFEPDLKTYSILLEG 210
F M + ++ +N LLSA C R + +A+ +F +M G PDL TYS L+E
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+GK L K + EM S G PD+ SY ++++ K+G + EA+ V M C P
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
+ YSVL++ +G R +D FLEM+ D YN LI F + FK V +
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERN 389
+M + P+ T II + G + A ++ + M P + YT +I+ F +
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ A+ + M PS+ TF +L+ + G ++ +L +++ GI +R TF
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 171/354 (48%), Gaps = 3/354 (0%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y ++E+ ++R+ + + D++ +M + G L ++ ++ +++ YA++ + EA+ F+ M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLP 218
N ++ LL+ +S +++F MK +PD TY+IL+E +G+
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+ F +MV PD+ +Y ++ K G ++A ++++ M N+ +P+S Y+ ++
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+G E+A+ AF M G + +++L+ +F + K +L + +G+
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKI 397
N T N I + G+ + A + + M K C+PD T ++ ++ +D +
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+++MK+ +PS+ + ++ + LLEEM+ + G++
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQM 638
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
+P+ Y+I++ G++ L K E F EM S G S V SY +++ + GR + ++E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 258 VVKDMDDNNCMPTSFIYSVLVHT---YGVENRIEDAIDAFLEMERKGIKADVVVYNALIG 314
++ M + P+ Y+ +++ G++ E + F EM +GI+ D+V YN L+
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLD--WEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 315 A-----------------------------------FCKANKFKNVRRVLKEMESNGVTP 339
A F K + + V +L EM S G P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIW 398
+ + NV++ + G A VF +M C P+A+TY++++ +F + D +++
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+MKS P T++ LI + G + L +M+E+ I P T+
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETY 425
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 2/233 (0%)
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAI 291
C P+ Y IM+ +L + G +D+ +EV +M + F Y+ L++ YG R E ++
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 292 DAFLEMERKGIKADVVVYNALIGAFCKAN-KFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ M+ + I ++ YN +I A + ++ + + EM G+ P+ T N ++S+
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 351 LISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
+G D A VFR M PD TY+ +++ F + ++ + +M S +P
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+ +++ L+ ++G+ +A + +M G P+ T+ L L + R D
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 120/275 (43%), Gaps = 7/275 (2%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
+ +AY +IE+ + Y+ M G ++ETF ++ +AR V E+
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKD 214
+ + +P+N FN + A + +A + + D K R +PD +T +L +
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+ + RE F EM ++ P ++ Y +M+ + K R D+ E++++M N +
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVI 635
Query: 275 SVLVHTYGVENRIEDAIDAFLE-MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
++ ++ ++ L+ + +G + YNAL+ A + + RVL E
Sbjct: 636 GQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEAT 695
Query: 334 SNGVTPNSRTCNVIISSL----ISQGRTDRAFEVF 364
G+ P N ++ S+ +S+G A V+
Sbjct: 696 KRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVW 730
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 165/343 (48%), Gaps = 3/343 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
T R + + ++ A +++++ D +M++ G L VE+ M +VD A+ +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M + ++ N N ++S C+S + K E+ M + F +Y+ L+ G +
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
L A + M +G P+VV++ ++ C+A ++ EA +V +M N P + Y
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L++ Y + E A + +M GI+ D++ YNALI CK K + + +KE++
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
+ PNS T + +I + DR FE+++ MI+ C P+ T+ M++ FC + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
A ++ ++M + T + NGL G LL+EM
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 183/387 (47%), Gaps = 18/387 (4%)
Query: 67 VENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRN 126
V+NVL + + + + FF WA+ + +H++ + +++ +L + R+++ I+ +
Sbjct: 84 VKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 127 KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
G +++ A D +Y++ D P+ F+ L + R A
Sbjct: 144 NGGVDLP-----------AKVFDALLYSYRECD--STPR---VFDSLFKTFAHLKKFRNA 187
Query: 187 QEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
+ F MK F P +++ + + + A +REM SP+ + +++
Sbjct: 188 TDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSG 247
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
C++G++D+ +E+++DM+ T Y+ L+ + + + A+ M + G++ +
Sbjct: 248 YCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPN 307
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
VV +N LI FC+A K + +V EM++ V PN+ T N +I+ QG + AF +
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 366 RMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
M+ + D TY +I C++ + A + K++ + VP+ TFSALI G C
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKL 451
NA + L + MI G P+ TF L
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNML 454
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 165/343 (48%), Gaps = 3/343 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
T R + + ++ A +++++ D +M++ G L VE+ M +VD A+ +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M + ++ N N ++S C+S + K E+ M + F +Y+ L+ G +
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
L A + M +G P+VV++ ++ C+A ++ EA +V +M N P + Y
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L++ Y + E A + +M GI+ D++ YNALI CK K + + +KE++
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
+ PNS T + +I + DR FE+++ MI+ C P+ T+ M++ FC + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
A ++ ++M + T + NGL G LL+EM
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 183/387 (47%), Gaps = 18/387 (4%)
Query: 67 VENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRN 126
V+NVL + + + + FF WA+ + +H++ + +++ +L + R+++ I+ +
Sbjct: 84 VKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLV 143
Query: 127 KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
G +++ A D +Y++ D P+ F+ L + R A
Sbjct: 144 NGGVDLP-----------AKVFDALLYSYRECD--STPR---VFDSLFKTFAHLKKFRNA 187
Query: 187 QEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
+ F MK F P +++ + + + A +REM SP+ + +++
Sbjct: 188 TDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSG 247
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
C++G++D+ +E+++DM+ T Y+ L+ + + + A+ M + G++ +
Sbjct: 248 YCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPN 307
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
VV +N LI FC+A K + +V EM++ V PN+ T N +I+ QG + AF +
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 366 RMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
M+ + D TY +I C++ + A + K++ + VP+ TFSALI G C
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKL 451
NA + L + MI G P+ TF L
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNML 454
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 186/421 (44%), Gaps = 25/421 (5%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNV-------- 132
++ FF W + + H++++ MI L + + ++ ++ K+ + +L+
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLV 122
Query: 133 -----------ETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
F +M YA+A +++++ F + + +L A LL++L K R
Sbjct: 123 GGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQR 182
Query: 182 NVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYG 240
+IF M K ++ Y++L+ K + KA + EM G PD+ +Y
Sbjct: 183 LTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYN 242
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
++ + CK EA+ V M+ + P Y+ +H + E R+ +A F E+ +
Sbjct: 243 TLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KD 301
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
+ A+ V Y LI +C+ N R+ + MES G +P T N I+ L GR A
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 361 FEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
+ M K EPD T +I +C+ +M A+K+ K M ++++ ALI+G
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKEPL 479
C+ A L MIEKG P T+ L + ++D +T L E+ K L
Sbjct: 422 FCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE---KRGL 478
Query: 480 C 480
C
Sbjct: 479 C 479
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 163/348 (46%), Gaps = 10/348 (2%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
+ Y++++ + ++ + ++++M KG+ ++ T+ ++ Y + EA+ +
Sbjct: 203 IHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQD 262
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPN 216
M++ V N+ +N + + +R+A +F +K + TY+ L++G+ + +
Sbjct: 263 RMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMND 322
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ +A M S G SP VV+Y ++ LC+ GR+ EA ++ +M P + +
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 277 LVHTYGVENRIEDAIDAFL---EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
L++ Y +IED + A +M G+K D+ Y ALI FCK + +N + L M
Sbjct: 383 LINAYC---KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERNEM 391
G +P T + ++ +Q + D ++ K +C D Y +I+ C+ ++
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC-ADVALYRGLIRRICKLEQV 498
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
D A +++ M+ K V F+ + + G +A L + M +
Sbjct: 499 DYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNR 546
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 181/380 (47%), Gaps = 10/380 (2%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
AF F+ E QR + AY +I+ + + + ++ +KG+ L+V F +
Sbjct: 305 AFDLFKVME-QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FE 198
Y ++ + A + M + N+ + L+ LC+ + +A ++ + R E
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P + TYS L++G+ K NL + +M+ G PDVV YG++VD L K G + A+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI----- 313
M + +++ L+ + NR ++A+ F M GIK DV + ++
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 314 -GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-C 371
AFCK K ++ M+ N ++ + CNV+I L R + A + F +I+
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACV 431
EPD TY MI +C +D A +I++ +K F P+ T + LI+ LC+N + A
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 432 LLEEMIEKGIRPSRVTFGKL 451
+ M EKG +P+ VT+G L
Sbjct: 664 MFSIMAEKGSKPNAVTYGCL 683
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 184/439 (41%), Gaps = 46/439 (10%)
Query: 16 VSFARMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRF 74
V + RML G P L + +C+ + + + G+ S +++ F
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 75 ENAG--MSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LN 131
G S F +E + Y V Y ++++ L++ KM + + LN
Sbjct: 437 CKCGNLRSGFALYEDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLL------SALCKSRNVRK 185
V F ++ + R ++ DEA+ F +M Y + ++A F ++ A CK
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 186 AQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
++FD M + + D+ ++++ K + A + F ++ PD+V+Y M+
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
C R+DEA + + + P + ++L+H N ++ AI F M KG K
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
+ V Y L+ F K+ + ++ +EM+ G++P S++S
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP----------SIVS----------- 714
Query: 365 RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
Y+++I C+R +D A I+ + +P + ++ LI G C+ G
Sbjct: 715 -------------YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 425 NAMKACVLLEEMIEKGIRP 443
++A +L E M+ G++P
Sbjct: 762 RLVEAALLYEHMLRNGVKP 780
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 3/290 (1%)
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKGRFEPDLKTYSILLEGWGKDPNLPKARE 222
P ++A +L AL V KA + M+ F + + + +L+G D + A
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASR 272
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
++ G +P+VV++ +++ CK G +D A ++ K M+ P YS L+ Y
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
+ F + KG+K DVVV+++ I + K+ V K M G++PN
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T ++I L GR AF ++ +++K EP TY+ +I FC+ + +++DM
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ P + + L++GL + G + A +M+ + IR + V F L
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 153/366 (41%), Gaps = 12/366 (3%)
Query: 15 FVSFARMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKR 73
F + ++L G EP + L + CK G L + + G + ++
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 74 FENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML- 130
G+ A RF Q + V ++ +I+ R+ ++ + M G+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVV-VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 131 NVETFCIVMR------KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
+V TF VMR + + K + F++M + ++ ++A N ++ L K +
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 185 KAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
A + F+++ +G+ EPD+ TY+ ++ G+ L +A F + P+ V+ I++
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
+LCK +D A+ + M + P + Y L+ + IE + F EM+ KGI
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+V Y+ +I CK + + + + P+ ++I GR A +
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 364 FRRMIK 369
+ M++
Sbjct: 770 YEHMLR 775
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ T+ ++ Y ++DEA F ++ N L+ LCK+ ++ A +F
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 191 DSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
M KG +P+ TY L++ + K ++ + + F EM G SP +VSY I++D LCK
Sbjct: 666 SIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
GRVDEA + D +P Y++L+ Y R+ +A + M R G+K D ++
Sbjct: 725 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 784
Query: 309 YNAL 312
AL
Sbjct: 785 QRAL 788
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 125 RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
RNK ++ +V+ + H++++A FN + + ++ ++ +N ++ C R +
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 185 KAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
+A+ IF+ +K F P+ T +IL+ K+ ++ A F M G P+ V+YG ++
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
D K+ ++ + ++ ++M + P+ YS+++ R+++A + F + +
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
DVV Y LI +CK + + + M NGV P+
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 156/395 (39%), Gaps = 67/395 (16%)
Query: 70 VLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM 129
VL E+ SA ++F WAE H++I + M+D+ K+ ++ +
Sbjct: 75 VLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNG--------MFDVADKVFDEMI 126
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
N V+ R +D V F L+ C+ V KA EI
Sbjct: 127 TNRGKDFNVLGS-IRDRSLDADVCKF-----------------LMECCCRYGMVDKALEI 168
Query: 190 F--DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS-YGIMVDIL 246
F + G P Y +L G D + + F ++ G P VS +G ++D L
Sbjct: 169 FVYSTQLGVVIPQDSVYRMLNSLIGSD-RVDLIADHFDKLCRGGIEPSGVSAHGFVLDAL 227
Query: 247 CKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
G V +A++ + L MER G + +
Sbjct: 228 FCKGEVTKALDFHR----------------------------------LVMER-GFRVGI 252
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
V N ++ ++ + R+L + G PN T +I+ +G DRAF++F+
Sbjct: 253 VSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 367 M-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
M + EPD Y+ +I + + + M K++ K + FS+ I+ ++G+
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
A V+ + M+ +GI P+ VT+ L + L ++ R
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 171/355 (48%), Gaps = 5/355 (1%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML--NVETFCIVMRKYARAHKV 148
+R A V Y+++I+ + + ++ ++ ++ + NV+T I++ ++ +V
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEP-DLKTYSIL 207
D+ + + M + E ++L ++ L+ LC + NV KA+ +F+ + R D+ TY+ +
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
L G+ + + ++ E +R M S ++VSY I++ L + G++DEA + + M
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
Y + +H V + A+ E+E G DV Y ++I CK + +
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFC 386
++KEM +GV NS CN +I LI R A R M K C P +Y ++I C
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
+ + A K+M + P L T+S L+ GLC++ A L + ++ G+
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 194/437 (44%), Gaps = 40/437 (9%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
SP+ V +LK +N +AF F+ A R YAH+ YH ++ L+ R + IV
Sbjct: 9 SPKHVLKLLKSEKNP-RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 123 KMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVM-DKYEVPQNLAAFNGLLSALCKS 180
+R++ E + V++ Y + D+A+ F M + + + ++N LL+A ++
Sbjct: 68 LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127
Query: 181 RNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSY 239
+ K + +F + P+L+TY++L++ K KAR M G PDV SY
Sbjct: 128 KQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSY 187
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV--------HTYGVE------- 284
+++ L KAG++D+A+E+ +M + P Y++L+ H +E
Sbjct: 188 STVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Query: 285 ---------------------NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
R++D + + M++ + D+ Y++LI C A
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIK 383
V E++ + + T N ++ G+ + E++R M + +Y ++IK
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIK 367
Query: 384 MFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRP 443
E ++D A IW+ M +K + T+ I+GLC NG KA +++E+ G
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 444 SRVTFGKLRQLLIKEKR 460
+ + L K+KR
Sbjct: 428 DVYAYASIIDCLCKKKR 444
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 182/362 (50%), Gaps = 2/362 (0%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMR-NKGMLNVETFCIVMRKYARAHKVDEAVYTFN 156
V+ +++MI L++ + I +M+ N+ ++ T+ ++ A VD+A FN
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPN 216
+D+ + ++ +N +L C+ ++++ E++ M+ + ++ +Y+IL++G ++
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGK 374
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ +A +R M + G + D +YGI + LC G V++A+ V+++++ + + Y+
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
++ + R+E+A + EM + G++ + V NALIG + ++ L+EM NG
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAM 395
P + N++I L G+ A + M++ +PD TY++++ C ++D+A+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
++W + + LI+GLC G A ++ M + + VT+ L +
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 456 IK 457
K
Sbjct: 615 FK 616
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 164/337 (48%), Gaps = 9/337 (2%)
Query: 87 WAERQRNYAHTVRAYHLMIESL---ARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKY 142
W + + + +Y+++I+ L +I + ++W + M KG + T+ I +
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL---MPAKGYAADKTTYGIFIHGL 404
Query: 143 ARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDL 201
V++A+ ++ ++ A+ ++ LCK + + +A + M K E +
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
+ L+ G +D L +A REM GC P VVSY I++ LCKAG+ EA VK+
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M +N P YS+L+ + +I+ A++ + + + G++ DV+++N LI C K
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTM 380
+ V+ ME T N T N ++ G ++RA ++ M K+ +PD +Y
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
++K C + AM+ + D ++ P+++T++ L+
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 165/367 (44%), Gaps = 38/367 (10%)
Query: 127 KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
K ++V T+ ++ + R K+ E++ + +M+ ++ N+ ++N L+ L ++ + +A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEA 378
Query: 187 QEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
I+ M + + D TY I + G + + KA +E+ S+G DV +Y ++D
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
LCK R++EA +VK+M + S + + L+ ++R+ +A EM + G +
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPT 498
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
VV YN LI CKA KF +KEM NG P+ +T ++++ L + D A E++
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 366 RMIKI-CEPDADTYTMMIKMFCERNEMDMAMK---------------------------- 396
+ ++ E D + ++I C ++D AM
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 397 -------IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG 449
IW M P + +++ ++ GLC A ++ GI P+ T+
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 450 KLRQLLI 456
L + ++
Sbjct: 679 ILVRAVV 685
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 8/262 (3%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFN 156
V AY +I+ L + ++ + ++V +M G+ LN ++ R ++ EA +
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDP 215
M K + ++N L+ LCK+ +A M + ++PDLKTYSILL G +D
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+ A E + + + +G DV+ + I++ LC G++D+A+ V+ +M+ NC Y+
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 276 VLVHTY---GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
L+ + G NR A + M + G++ D++ YN ++ C +
Sbjct: 609 TLMEGFFKVGDSNR---ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Query: 333 ESNGVTPNSRTCNVIISSLISQ 354
++G+ P T N+++ +++++
Sbjct: 666 RNHGIFPTVYTWNILVRAVVNR 687
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 174/377 (46%), Gaps = 26/377 (6%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIR-QYQIMWDIVTKMRN----KGMLNVET 134
+A F +W R N+ H V +Y ++ L Y++ + +++ + L V
Sbjct: 42 TALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVD 101
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLA--AFNGLLSALCKSRNVRKAQEIFDS 192
FC MRK D +E+ L +N LLS+L + V + + ++
Sbjct: 102 FCRTMRK----------------GDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTE 145
Query: 193 M-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
M + PD+ T++ L+ G+ K + +A++ ++ AGC PD +Y + C+
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
VD A +V K+M N C Y+ L++ +I++A+ ++M+ +V Y
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-I 370
LI A C + + + K+M +G+ P+ V+I S S D A + M++
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 371 CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
P+ TY +IK FC++N + AM + M + VP L T++ LI G C +GN A
Sbjct: 326 LMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAY 384
Query: 431 VLLEEMIEKGIRPSRVT 447
LL M E G+ P++ T
Sbjct: 385 RLLSLMEESGLVPNQRT 401
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 17/318 (5%)
Query: 146 HKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKS-----------RNVRKAQEIFDSMK 194
H V ++ E+P + L+ C S R +RK DS +
Sbjct: 58 HNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKG----DSFE 113
Query: 195 GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE 254
+++ K Y+ LL + + + + + EM+ SPD+ ++ +V+ CK G V E
Sbjct: 114 IKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVE 173
Query: 255 AVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIG 314
A + V + C P F Y+ + + ++ A F EM + G + V Y LI
Sbjct: 174 AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIY 233
Query: 315 AFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEP 373
+A K +L +M+ + PN RT V+I +L G+ A +F++M + +P
Sbjct: 234 GLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
D YT++I+ FC + +D A + + M +P++ T++ALI G C+ N KA LL
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLL 352
Query: 434 EEMIEKGIRPSRVTFGKL 451
+M+E+ + P +T+ L
Sbjct: 353 SKMLEQNLVPDLITYNTL 370
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 175/372 (47%), Gaps = 12/372 (3%)
Query: 73 RFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LN 131
RFE+A FFE Q ++ + ++ + A +R+Y+ + KM G+ +
Sbjct: 51 RFEDAFA---LFFEMVHSQP--LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
+ +F I++ + R ++ A+ M K ++ F LL C + A +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 192 SM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
M K +EP++ Y+ L++G K+ L A E EM G DVV+Y ++ LC +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
R +A +++DM + P ++ L+ + + +++A + + EM + + + V YN
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
++I C + + ++ M S G PN T N +IS D ++F+RM
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--S 343
Query: 371 CE---PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
CE D TY +I +C+ ++ +A+ I+ M S+R P + T L++GLC NG
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 428 KACVLLEEMIEK 439
A V ++M E
Sbjct: 404 SALVKFDDMRES 415
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 22/378 (5%)
Query: 76 NAGMSAFRFFEWAERQR-NYAHTVR---AYHLMIESLARIRQYQIMWDIVTKMRNKGMLN 131
G +A F ++ E+ R + H++R A+ L E + ++ + +
Sbjct: 27 GGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFE----------------MVHSQPLPS 70
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
+ F ++ A + + +Y M+ Y + +L +F L+ C+ + A +
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLG 130
Query: 192 SM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
M K +EP + T+ LL G+ + A MV +G P+VV Y ++D LCK G
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++ A+E++ +M+ Y+ L+ R DA +M ++ I DVV +
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-K 369
ALI F K + + KEM + V PN+ T N II+ L GR A + F M K
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 370 ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
C P+ TY +I FC+ +D MK+++ M + F + T++ LI+G CQ G A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 430 CVLLEEMIEKGIRPSRVT 447
+ M+ + + P +T
Sbjct: 371 LDIFCWMVSRRVTPDIIT 388
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 8/381 (2%)
Query: 71 LKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM- 129
L+R+E +F +H + ++ ++I R + ++ KM G
Sbjct: 84 LRRYETV-----IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE 138
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
++ TF ++ + +++ +A +M K N+ +N L+ LCK+ + A E+
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 190 FDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
+ M K D+ TY+ LL G A R+M+ +PDVV++ ++D+ K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
G +DEA E+ K+M ++ P + Y+ +++ + R+ DA F M KG +VV
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
YN LI FCK ++ + M G + T N +I G+ A ++F M+
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 369 -KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
+ PD T+ +++ C E++ A+ + DM+ + ++ +I+GLC+
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 428 KACVLLEEMIEKGIRPSRVTF 448
KA L + +G++P T+
Sbjct: 439 KAWELFCRLPVEGVKPDARTY 459
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 156/318 (49%), Gaps = 12/318 (3%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKS-RNVRKAQEI 189
NV + ++ + +++ A+ N M+K + ++ +N LL+ LC S R A+ +
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 190 FDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
D MK PD+ T++ L++ + K NL +A+E ++EM+ + P+ V+Y +++ LC
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
GR+ +A + M C P Y+ L+ + +++ + F M +G AD+ Y
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-- 367
N LI +C+ K + + M S VTP+ T +++ L G + A F M
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 368 ----IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
I I Y +MI C+ ++++ A +++ + + P T++ +I GLC+N
Sbjct: 415 SEKYIGIV-----AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 424 GNAMKACVLLEEMIEKGI 441
G +A L+ M E+GI
Sbjct: 470 GPRREADELIRRMKEEGI 487
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 1/228 (0%)
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
++M G S D+ S+ I++ C+ R+ A+ V+ M P+ + L+H + +
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
NRI DA + M + G + +VVVYN LI CK + +L EME G+ + T
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 345 NVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
N +++ L GR A + R M+K PD T+T +I +F ++ +D A +++K+M
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
P+ T++++INGLC +G A + M KG P+ VT+ L
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 152/320 (47%), Gaps = 3/320 (0%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
+ Y V Y+ +I+ L + + I +++ +M KG+ +V T+ ++ + +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILL 208
+A M K + ++ F L+ K N+ +AQE++ M + +P+ TY+ ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G L A++TF M S GC P+VV+Y ++ CK VDE +++ + M
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
F Y+ L+H Y ++ A+D F M + + D++ + L+ C + ++
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCE 387
+M + N++I L + ++A+E+F R+ ++ +PDA TYT+MI C+
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 388 RNEMDMAMKIWKDMKSKRFV 407
A ++ + MK + +
Sbjct: 469 NGPRREADELIRRMKEEGII 488
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
R ++A + +M + +P+ ++ L+ R E I +ME GI D+ +
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
LI FC+ ++ VL +M G P+ T ++ R AF + M+K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 371 C-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
EP+ Y +I C+ E+++A+++ +M+ K + T++ L+ GLC +G A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 430 CVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+L +M+++ I P VTF L + +K+ D
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLD 263
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 195/430 (45%), Gaps = 29/430 (6%)
Query: 30 QEVADLTETVCKVMMSSPGVTLDAALNQTGVRA--SPELVENVLKRF---ENAGMSAFRF 84
Q+ + + VCK GV+ D L T + A VE +K F E AG+
Sbjct: 243 QKCCEAFDVVCK------GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV----- 291
Query: 85 FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYA 143
A V ++ +I+ L +Y + KM +GM + T+ I+++
Sbjct: 292 ----------APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLK 202
RA ++ +A + M K P N+ +N L+ + ++ ++ KA EI D M +
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+ L++G+ K+ A +EM+S G + + S+ ++ +LC D A+ V +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
N P + + L+ + A++ + + KG D NAL+ C+A K
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMM 381
R+ KE+ G + + N +IS + + D AF M+K +PD TY+++
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 382 IKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
I N+++ A++ W D K +P ++T+S +I+G C+ + +EM+ K +
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 442 RPSRVTFGKL 451
+P+ V + L
Sbjct: 642 QPNTVVYNHL 651
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 7/290 (2%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
N LL LC++ + +A I + GR D +Y+ L+ G L +A EMV
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
G PD +Y I++ L +V+EA++ D N +P + YSV++ R E+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
+ F EM K ++ + VVYN LI A+C++ + + ++M+ G++PNS T +I
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 350 SLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
+ R + A +F M ++ EP+ YT +I + + +M + ++M SK P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT-----FGKLRQ 453
+ T++ +I G ++GN +A LL EM EKGI P +T +G L+Q
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 147/290 (50%), Gaps = 6/290 (2%)
Query: 165 QNLAAFNGLL----SALCKSRNVRKAQEI-FDSMKGRFEPDLKTYSILLEGWGKDPNLPK 219
+N++ GLL S LCK KA E+ F + F D +T + LL G + L +
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 220 ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
A +E++ GC D VSY ++ C ++DEA + +M P ++ YS+L+
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 280 TYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP 339
N++E+AI + + +R G+ DV Y+ +I CKA + + + EM S V P
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIW 398
N+ N +I + GR A E+ M K P++ TYT +IK + ++ A ++
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
++M+ + P++ ++ALI+G + G +K LL EM K + P+++T+
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 7/291 (2%)
Query: 158 MDKYEVPQNLAAF------NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGW 211
+D + V N F N LL++L ++ +K E FD + PD+ ++ + +
Sbjct: 211 LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF 270
Query: 212 GKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
K + +A + F +M AG +P+VV++ ++D L GR DEA + M + PT
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
YS+LV RI DA EM +KG +V+VYN LI +F +A +
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNE 390
M S G++ S T N +I G+ D A + + M+ I + ++T +I + C
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 391 MDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
D A++ +M + P + LI+GLC++G KA L + + KG
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 3/329 (0%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
+I L + ++ ++ + NKG +++ T ++ A K+DEA +
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKAR 221
+ ++N L+S C + + +A D M R +PD TYSIL+ G + +A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
+ + + G PDV +Y +M+D CKA R +E E +M N P + +Y+ L+ Y
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
R+ A++ +M+ KGI + Y +LI ++ + + + +EM G+ PN
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+I G+ + + R M K P+ TYT+MI + + A ++ +
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKA 429
M+ K VP T+ I G + G ++A
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 2/252 (0%)
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYS 205
K+DEA + M K + + ++ L+ L V +A + +D K PD+ TYS
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
++++G K + +E F EM+S P+ V Y ++ C++GR+ A+E+ +DM
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P S Y+ L+ + +R+E+A F EM +G++ +V Y ALI + K + V
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKM 384
+L+EM S V PN T V+I G A + M K PD+ TY I
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 385 FCERNEMDMAMK 396
+ ++ + A K
Sbjct: 795 YLKQGGVLEAFK 806
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCE 387
V + + G+ P+ TCN++++SL+ + E F + K PD +T I FC+
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCK 272
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+++ A+K++ M+ P++ TF+ +I+GL G +A + E+M+E+G+ P+ +T
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 332
Query: 448 FGKLRQLLIKEKR 460
+ L + L + KR
Sbjct: 333 YSILVKGLTRAKR 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN------------------------- 324
A+D F + KG+ N L+ + +AN+F+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 325 ---------VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPD 374
++ +ME GV PN T N +I L GR D AF +M+ + EP
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
TY++++K + A + K+M K F P++ ++ LI+ + G+ KA + +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 435 EMIEKGIRPSRVTFGKLRQLLIKEKRED 462
M+ KG+ + T+ L + K + D
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 195/430 (45%), Gaps = 29/430 (6%)
Query: 30 QEVADLTETVCKVMMSSPGVTLDAALNQTGVRA--SPELVENVLKRF---ENAGMSAFRF 84
Q+ + + VCK GV+ D L T + A VE +K F E AG+
Sbjct: 243 QKCCEAFDVVCK------GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV----- 291
Query: 85 FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYA 143
A V ++ +I+ L +Y + KM +GM + T+ I+++
Sbjct: 292 ----------APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLK 202
RA ++ +A + M K P N+ +N L+ + ++ ++ KA EI D M +
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+ L++G+ K+ A +EM+S G + + S+ ++ +LC D A+ V +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
N P + + L+ + A++ + + KG D NAL+ C+A K
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMM 381
R+ KE+ G + + N +IS + + D AF M+K +PD TY+++
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 382 IKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
I N+++ A++ W D K +P ++T+S +I+G C+ + +EM+ K +
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 442 RPSRVTFGKL 451
+P+ V + L
Sbjct: 642 QPNTVVYNHL 651
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 7/290 (2%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
N LL LC++ + +A I + GR D +Y+ L+ G L +A EMV
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
G PD +Y I++ L +V+EA++ D N +P + YSV++ R E+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
+ F EM K ++ + VVYN LI A+C++ + + ++M+ G++PNS T +I
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 350 SLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
+ R + A +F M ++ EP+ YT +I + + +M + ++M SK P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT-----FGKLRQ 453
+ T++ +I G ++GN +A LL EM EKGI P +T +G L+Q
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 147/290 (50%), Gaps = 6/290 (2%)
Query: 165 QNLAAFNGLL----SALCKSRNVRKAQEI-FDSMKGRFEPDLKTYSILLEGWGKDPNLPK 219
+N++ GLL S LCK KA E+ F + F D +T + LL G + L +
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 220 ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
A +E++ GC D VSY ++ C ++DEA + +M P ++ YS+L+
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583
Query: 280 TYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP 339
N++E+AI + + +R G+ DV Y+ +I CKA + + + EM S V P
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIW 398
N+ N +I + GR A E+ M K P++ TYT +IK + ++ A ++
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
++M+ + P++ ++ALI+G + G +K LL EM K + P+++T+
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 7/291 (2%)
Query: 158 MDKYEVPQNLAAF------NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGW 211
+D + V N F N LL++L ++ +K E FD + PD+ ++ + +
Sbjct: 211 LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF 270
Query: 212 GKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
K + +A + F +M AG +P+VV++ ++D L GR DEA + M + PT
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
YS+LV RI DA EM +KG +V+VYN LI +F +A +
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNE 390
M S G++ S T N +I G+ D A + + M+ I + ++T +I + C
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 391 MDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
D A++ +M + P + LI+GLC++G KA L + + KG
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 3/329 (0%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
+I L + ++ ++ + NKG +++ T ++ A K+DEA +
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKAR 221
+ ++N L+S C + + +A D M R +PD TYSIL+ G + +A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
+ + + G PDV +Y +M+D CKA R +E E +M N P + +Y+ L+ Y
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
R+ A++ +M+ KGI + Y +LI ++ + + + +EM G+ PN
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+I G+ + + R M K P+ TYT+MI + + A ++ +
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKA 429
M+ K VP T+ I G + G ++A
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 2/252 (0%)
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYS 205
K+DEA + M K + + ++ L+ L V +A + +D K PD+ TYS
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
++++G K + +E F EM+S P+ V Y ++ C++GR+ A+E+ +DM
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P S Y+ L+ + +R+E+A F EM +G++ +V Y ALI + K + V
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKM 384
+L+EM S V PN T V+I G A + M K PD+ TY I
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 385 FCERNEMDMAMK 396
+ ++ + A K
Sbjct: 795 YLKQGGVLEAFK 806
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCE 387
V + + G+ P+ TCN++++SL+ + E F + K PD +T I FC+
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCK 272
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+++ A+K++ M+ P++ TF+ +I+GL G +A + E+M+E+G+ P+ +T
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 332
Query: 448 FGKLRQLLIKEKR 460
+ L + L + KR
Sbjct: 333 YSILVKGLTRAKR 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN------------------------- 324
A+D F + KG+ N L+ + +AN+F+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 325 ---------VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPD 374
++ +ME GV PN T N +I L GR D AF +M+ + EP
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
TY++++K + A + K+M K F P++ ++ LI+ + G+ KA + +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 435 EMIEKGIRPSRVTFGKLRQLLIKEKRED 462
M+ KG+ + T+ L + K + D
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 206/448 (45%), Gaps = 65/448 (14%)
Query: 63 SPEL----VENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMW 118
SPEL VE VL F+ G+ A+ FF WA +Q Y + + AY+ M L+R RQ +
Sbjct: 68 SPELNTKVVETVLNGFKRWGL-AYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLK 126
Query: 119 DIVTKMRN-KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE--VPQNLAAFNGLLS 175
+V + N + ++ F +R A VDEA F+ + + VP N +N LL
Sbjct: 127 ALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVP-NAYTYNCLLE 185
Query: 176 ALCKSRN--VRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
A+ KS + V + M+ F D T + +L+ + +A F E++S G
Sbjct: 186 AISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW 245
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
+ +S I+V CK G+VD+A E+++ +++ + Y VL+H + E+RI+ A
Sbjct: 246 LDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQ 304
Query: 293 AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN------------ 340
F +M R G+ AD+ +Y+ LIG CK + + E++ +G+ P+
Sbjct: 305 LFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFS 364
Query: 341 -----SRTCNVIISSLISQG-------------RTDRAFEVF---------------RRM 367
SR VII + + R D E + +
Sbjct: 365 EESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEI 424
Query: 368 IKICE-------PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
+K+ + PD+D+ +++I + N++DMA+ + D+ +P ++ +I G+
Sbjct: 425 VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGM 484
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVTF 448
C+ G + ++ LL EM + G+ PS+ T
Sbjct: 485 CKEGRSEESLKLLGEMKDAGVEPSQFTL 512
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 152/336 (45%), Gaps = 13/336 (3%)
Query: 121 VTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK 179
+ K NK +L + ++ IV+ +A+KVD AV + + + + +N ++ +CK
Sbjct: 427 LLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCK 486
Query: 180 SRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
++ ++ MK EP T + + + + A + ++M G P +
Sbjct: 487 EGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKH 546
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE-DAIDAFLEM 297
+V LC+ GR AV+ K +DD F+ ++ T ++ I+ + +D LE+
Sbjct: 547 TTFLVKKLCENGR---AVDACKYLDD--VAGEGFLGHMVASTAAIDGLIKNEGVDRGLEL 601
Query: 298 ER----KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
R G DV+ Y+ LI A CKA + + EM S G+ P T N +I
Sbjct: 602 FRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCK 661
Query: 354 QGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
+G DR RM + + PD TYT +I C A+ W +MK K P+ T
Sbjct: 662 EGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRIT 721
Query: 413 FSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
F ALI GLC+ G + +A V EM EK + P +
Sbjct: 722 FMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 174/422 (41%), Gaps = 70/422 (16%)
Query: 103 LMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
+++ S + Q ++++ + + + LN +T+C+++ + + ++D+A F M +
Sbjct: 253 ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPD-------------------- 200
+ ++A ++ L+ LCK +++ A ++ +K PD
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRI 372
Query: 201 -------------LKTYSILLEGWGKDPNLPKARETFREMV----SAGCS---------- 233
+ Y L EG+ ++ + +A + ++ S G S
Sbjct: 373 TEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHN 432
Query: 234 ----PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
PD S I+++ L KA +VD AV ++ D+ N +P +Y+ ++ E R E+
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
++ EM+ G++ N + G + F +LK+M G P + ++
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 350 SLISQGRT--------DRAFEVF-RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
L GR D A E F M+ T I + +D +++++D
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMV--------ASTAAIDGLIKNEGVDRGLELFRD 604
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+ + P + + LI LC+ M+A +L EM+ KG++P+ T+ + KE
Sbjct: 605 ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 461 ED 462
D
Sbjct: 665 ID 666
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 122/295 (41%), Gaps = 36/295 (12%)
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
PD + SI++ K + A ++V G P + Y +++ +CK GR +E++++
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 259 VKDMDDNNCMPTSF----IYSVLVHT---------------YGVE--------------- 284
+ +M D P+ F IY L YG E
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 285 -NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
R DA ++ +G +V A I K + +++ +NG P+
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 344 CNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+V+I +L RT A +F M+ K +P TY MI +C+ E+D + M
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
P + T+++LI+GLC +G +A EM K P+R+TF L Q L K
Sbjct: 677 EDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 6/254 (2%)
Query: 119 DIVTKMRNKGM---LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLS 175
D++ KMR G + TF +V + VD Y +V + + +A+ +
Sbjct: 530 DLLKKMRFYGFEPWIKHTTF-LVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS-TAAID 587
Query: 176 ALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSP 234
L K+ V + E+F D PD+ Y +L++ K +A F EMVS G P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
V +Y M+D CK G +D + + M ++ P Y+ L+H R +AI +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
EM+ K + + + ALI CK +EME + P+S ++SS +S
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSS 767
Query: 355 GRTDRAFEVFRRMI 368
+ F +FR M+
Sbjct: 768 ENINAGFGIFREMV 781
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETF 224
++ A++ L+ ALCK+ +A +F+ M + +P + TY+ +++GW K+ + +
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
M +PDV++Y ++ LC +GR EA+ +M +C P + L+
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
+A+ F EME K ++ D VY +L+ +F + + +EM G P S
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDR 792
Query: 345 NVIIS 349
N +++
Sbjct: 793 NYMLA 797
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 3/244 (1%)
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G D+ +Y M IL +A + +V D+ ++ C + + + G +++A
Sbjct: 101 GYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEA 160
Query: 291 IDAFLEMERKGI-KADVVVYNALIGAFCKANK--FKNVRRVLKEMESNGVTPNSRTCNVI 347
F + G+ + YN L+ A K+N + V LKEM G + T +
Sbjct: 161 SSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPV 220
Query: 348 ISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
+ + G+++RA VF ++ D T+++ FC+ ++D A ++ + ++ +
Sbjct: 221 LQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIR 280
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFL 467
+ T+ LI+G + KA L E+M G+ + L L K K ++ L
Sbjct: 281 LNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSL 340
Query: 468 HEKI 471
+ +I
Sbjct: 341 YLEI 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V + ++++ +A + EA FN M + +A +N ++ CK + +
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 191 DSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M + PD+ TY+ L+ G +A + EM C P+ +++ ++ LCK
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
G EA+ ++M++ P S +Y LV ++ I F EM KG
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 178/360 (49%), Gaps = 5/360 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
++ +I+ L ++ + + +++ +M+ + + N T+ ++ Y RA K++ A + M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNL 217
+ E+ N+ N ++ +C+ + A F D K + ++ TY L+ N+
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
KA + +M+ AGCSPD Y ++ LC+ R +A+ VV+ + + Y++L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ + +N E + +ME++G K D + YN LI F K F++V R++++M +G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPDADTYTMMIKMFCERNEMDMAM 395
P T +I + S G D A ++F+ M P+ Y ++I F + A+
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+ ++MK K P++ T++AL L + L++EM+E+ P+++T L + L
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 189/422 (44%), Gaps = 55/422 (13%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVMRKYARAHKVDEAVYTFNVM- 158
++ ++ L R M D+V KM K +V T I++ ++ +VDEA+ F M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 159 -----DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK--GRFEPDLKTYSILLEGW 211
D + + FN L+ LCK +++A+E+ MK R P+ TY+ L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 212 GKDPNLPKARET-----------------------------------FREMVSAGCSPDV 236
+ L A+E F +M G +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
V+Y ++ C V++A+ + M + C P + IY L+ R DAI +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
++ G D++ YN LIG FC N + V +L +ME G P+S T N +IS G+
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF---GK 593
Query: 357 TDRAFEVFRRMIKI-----CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK-SKRFVPSL 410
+ FE RM++ +P TY +I +C E+D A+K++KDM + P+
Sbjct: 594 -HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLI-KEKREDVLTFLHE 469
++ LIN + GN +A L EEM K +RP+ T+ L + L K + E +L + E
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 470 KI 471
+
Sbjct: 713 MV 714
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 158/358 (44%), Gaps = 31/358 (8%)
Query: 105 IESLARIRQYQIMWDIVTK-MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEV 163
I SL + + WDI++ M+NK L F ++ R + MD+ ++
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARET 223
++ L++ LCKSR V +A E+F+ M+G+ D N+ KA
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGK--------------RTDDGNVIKA--- 368
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD-DNNCMPTSFIYSVLVHTYG 282
D + + ++D LCK GR+ EA E++ M + C+P + Y+ L+ Y
Sbjct: 369 -----------DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYC 417
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
++E A + M+ IK +VV N ++G C+ + +ME GV N
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T +I + S ++A + +M++ C PDA Y +I C+ A+++ + +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
K F L ++ LI C NA K +L +M ++G +P +T+ L K K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 148/328 (45%), Gaps = 15/328 (4%)
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
+++R + R V+++V + +D +N N ++ L ++ V A ++ D M +
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 197 ---FEPDLKTYSILLEGWGKDPNLPKAR--ETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
F P+ T I+L K+ L + + S G SP+ V + LCK R
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
+ A +++ D+ N + ++ L+ G I D L+M+ I+ DVV
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGI 334
Query: 312 LIGAFCKANKFKNVRRVLKEM------ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
LI CK+ + V ++M + N + +S N +I L GR A E+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 366 RMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
RM + C P+A TY +I +C +++ A ++ MK P++ T + ++ G+C++
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 424 GNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A V +M ++G++ + VT+ L
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 177/360 (49%), Gaps = 5/360 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
++ +I+ L ++ + + +++ +M+ + N T+ ++ Y RA K++ A + M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNL 217
+ E+ N+ N ++ +C+ + A F D K + ++ TY L+ N+
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
KA + +M+ AGCSPD Y ++ LC+ R +A+ VV+ + + Y++L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ + +N E + +ME++G K D + YN LI F K F++V R++++M +G+
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPDADTYTMMIKMFCERNEMDMAM 395
P T +I + S G D A ++F+ M P+ Y ++I F + A+
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+ ++MK K P++ T++AL L + L++EM+E+ P+++T L + L
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 187/422 (44%), Gaps = 55/422 (13%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVMRKYARAHKVDEAVYTFNVM- 158
++ ++ L R M D+V KM K +V T I++ ++ +VDEA+ F M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 159 -----DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK--GRFEPDLKTYSILLEGW 211
D + + FN L+ LCK +++A+E+ MK R P+ TY+ L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 212 GKDPNLPKARET-----------------------------------FREMVSAGCSPDV 236
+ L A+E F +M G +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
V+Y ++ C V++A+ + M + C P + IY L+ R DAI +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
++ G D++ YN LIG FC N + V +L +ME G P+S T N +IS
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH-- 594
Query: 357 TDRAFEVFRRMIKI-----CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK-SKRFVPSL 410
+ FE RM++ +P TY +I +C E+D A+K++KDM + P+
Sbjct: 595 --KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLI-KEKREDVLTFLHE 469
++ LIN + GN +A L EEM K +RP+ T+ L + L K + E +L + E
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 470 KI 471
+
Sbjct: 713 MV 714
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 176/416 (42%), Gaps = 48/416 (11%)
Query: 49 VTLDAALNQT--GVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIE 106
+T D L++ G + E + ++ RF + G+S W R I
Sbjct: 223 ITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV--WLTR-------------FIS 267
Query: 107 SLARIRQYQIMWDIVTK-MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQ 165
SL + + WDI++ M+NK L F ++ R + MD+ ++
Sbjct: 268 SLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRP 327
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFR 225
++ L++ LCKSR V +A E+F+ M+G+ D N+ KA
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGK--------------RTDDGNVIKA----- 368
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD-DNNCMPTSFIYSVLVHTYGVE 284
D + + ++D LCK GR+ EA E++ M + C P + Y+ L+ Y
Sbjct: 369 ---------DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
++E A + M+ IK +VV N ++G C+ + +ME GV N T
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
+I + S ++A + +M++ C PDA Y +I C+ A+++ + +K
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
F L ++ LI C N K +L +M ++G +P +T+ L K K
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 15/335 (4%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
L V +++R + R V+++V + +D +N N ++ L ++ V A ++
Sbjct: 150 LTVVATNLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKV 207
Query: 190 FDSMKGR---FEPDLKTYSILL-EGW-GKDPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
D M + F P+ T I+L E W G+ K S G SP+ V +
Sbjct: 208 LDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFIS 267
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
LCK R + A +++ D+ N + ++ L+ G I D L+M+ I+
Sbjct: 268 SLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRP 327
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEM------ESNGVTPNSRTCNVIISSLISQGRTD 358
DVV LI CK+ + V ++M + N + +S N +I L GR
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 359 RAFEVFRRMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
A E+ RM + C P+A TY +I +C +++ A ++ MK P++ T + +
Sbjct: 388 EAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTI 447
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ G+C++ A V +M ++G++ + VT+ L
Sbjct: 448 VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 156/304 (51%), Gaps = 3/304 (0%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDK-YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
++ + R + +A+ F+VM K N +++ L+ LC+ + +A + D M +
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 197 -FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
+P +TY++L++ + KA F EM+ GC P+V +Y +++D LC+ G+++EA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
V + M + P+ Y+ L++ Y + R+ A + ME++ K +V +N L+
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPD 374
C+ K +LK M NG++P+ + NV+I L +G + A+++ M EPD
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
T+T +I FC++ + D+A M K T + LI+G+C+ G A +LE
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILE 535
Query: 435 EMIE 438
+++
Sbjct: 536 TLVK 539
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 177/356 (49%), Gaps = 5/356 (1%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
+ R Y ++I++L +++ +M +G NV T+ +++ R K++EA
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKD 214
M K + ++ +N L++ CK V A E+ M+ R +P+++T++ L+EG +
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
KA + M+ G SPD+VSY +++D LC+ G ++ A +++ M+ + P +
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 275 SVLVHTYGVENRIEDAIDAFLE-MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
+ +++ + + + D AFL M RKGI D V LI CK K ++ +L+ +
Sbjct: 480 TAIINAFCKQGK-ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMD 392
+ + NVI+ L + + ++ K+ P TYT ++ ++
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ +I + MK +P+++ ++ +INGLCQ G +A LL M + G+ P+ VT+
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 153/317 (48%), Gaps = 5/317 (1%)
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS--MKGRFEPDLKTYSILL 208
A T+ M+ + + +++ALCK+ +A E+F S +K F D + LL
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKN-GYTEAAEMFMSKILKIGFVLDSHIGTSLL 237
Query: 209 EGWGKDPNLPKARETFREMV-SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
G+ + NL A + F M C+P+ VSY I++ LC+ GR++EA + M + C
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P++ Y+VL+ I+ A + F EM +G K +V Y LI C+ K +
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFC 386
V ++M + + P+ T N +I+ GR AFE+ M K C+P+ T+ +++ C
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+ A+ + K M P + +++ LI+GLC+ G+ A LL M I P +
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 447 TFGKLRQLLIKEKREDV 463
TF + K+ + DV
Sbjct: 478 TFTAIINAFCKQGKADV 494
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 2/237 (0%)
Query: 246 LCKAGRVDEAVEVVKDMDDN-NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
C+ + +A++V M C P S YS+L+H R+E+A +M KG +
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
Y LI A C + EM G PN T V+I L G+ + A V
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 365 RRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
R+M+K P TY +I +C+ + A ++ M+ + P++ TF+ L+ GLC+
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 424 GNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVKEPLC 480
G KA LL+ M++ G+ P V++ L L +E + L +N EP C
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 154/333 (46%), Gaps = 5/333 (1%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
+V Y+ +I + + ++++T M + NV TF +M R K +AV+
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKD 214
M + ++ ++N L+ LC+ ++ A ++ SM EPD T++ ++ + K
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
A M+ G S D V+ ++D +CK G+ +A+ +++ + + T
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+V++ ++++ + ++ + G+ VV Y L+ ++ R+L+ M+
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
+G PN +II+ L GR + A ++ M P+ TYT+M+K + ++D
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 394 AMKIWKDMKSKRFVPSLHTFSALING--LCQNG 424
A++ + M + + + +S+L+ G L Q G
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 155/335 (46%), Gaps = 22/335 (6%)
Query: 124 MRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRN 182
M KG+ L+ T ++ + K +A++ + K + + N +L L K
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 183 VRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
V++ + + K P + TY+ L++G + ++ + M +GC P+V Y I
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
+++ LC+ GRV+EA +++ M D+ P Y+V+V Y +++ A++ M +G
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 302 IKADVVVYNALIGAFCKANKFKN-------------------VRRVLKEMESNGVTPNSR 342
+ + +Y++L+ F + K + + ++ +E G S
Sbjct: 682 YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCI-SG 740
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
C +++ L +GRTD + ++ + +++ ++++ +C + + M++ +
Sbjct: 741 LCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVL 800
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
FVPS +F +I GL + G+A +A L+ E++
Sbjct: 801 KSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 177/370 (47%), Gaps = 18/370 (4%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y +I++ + ++Y I ++ +M +G ++ T+ I++ + +D+AV +
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
V + A +N L+S LCK+ A+ +F M R PD Y+ L++G+ + +
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+AR+ F V G DVV + M+ C++G +DEA+ + M++ + +P F YS +
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ Y + + AI F ME+ K +VV Y +LI FC FK KEM+ +
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 338 TPNSRTCNVIISSLISQGRT-DRAFEVFRRMI-KICEPDADTYTMMIKMFCER------- 388
PN T +I SL + T ++A + M+ C P+ T+ +++ F ++
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681
Query: 389 -------NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
+ + + + MKS + +++ + LC +G AC+ ++M++KG
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741
Query: 442 RPSRVTFGKL 451
P V+F +
Sbjct: 742 SPDPVSFAAI 751
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 175/374 (46%), Gaps = 7/374 (1%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFC--IVMRKYARAHK 147
+ + + T+ + MI + + ++++++ +G+ F I+ KY +K
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD--SMKGRFEPDLKTYS 205
VD A + + + ++A +N L++ LCK A D S KG P+ +Y+
Sbjct: 327 VDPA-ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI-PNNLSYA 384
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
L++ + K A + +M GC PD+V+YGI++ L +G +D+AV + + D
Sbjct: 385 PLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P + IY++L+ R A F EM + I D VY LI F ++ F
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKM 384
R+V GV + N +I G D A RM + PD TY+ +I
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+ ++ +M A+KI++ M+ + P++ T+++LING C G+ A +EM + + P+
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 445 RVTFGKLRQLLIKE 458
VT+ L + L KE
Sbjct: 625 VVTYTTLIRSLAKE 638
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 171/385 (44%), Gaps = 39/385 (10%)
Query: 83 RFFEW--AERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
+ F+W +E++ + A ++ LAR R + + D++ +RN+ + L E V+
Sbjct: 82 KLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVL 141
Query: 140 RKYARAHKVDEAVYTFN-VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE 198
YA + + +AV ++ V++ Y+ ++ A N LLS L KSR
Sbjct: 142 HAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRR---------------- 185
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
L AR+ + EM G S D S I+V +C G+V+ ++
Sbjct: 186 ------------------LGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
++ C+P Y+ ++ Y IE+A F E++ KG + + +I FCK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG-RTDRAFEVFRRMIKICEPDADT 377
F R+L E++ G+ + N II + G + D A + + C+PD T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
Y ++I C+ + ++A+ + K +P+ +++ LI C++ A LL +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 438 EKGIRPSRVTFGKLRQLLIKEKRED 462
E+G +P VT+G L L+ D
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMD 432
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 27/410 (6%)
Query: 65 ELVENVLKRFENAGM--SAFRF---FEWAERQRNYAHTVRAYHLMIESLARIRQY----- 114
E ENVLK ++ G AF F F+ + Y ++S ++ Y
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 115 ----------QIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEV 163
+ +I+ + KG++ N + ++ Y R + A M+K +
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARE 222
+ A+N L+ C+ + A++ + MK + P ++TY+IL+ G+G+ K +
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
+EM G P+VVSYG +++ LCK ++ EA V +DM+D P IY++L+
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
+ +IEDA EM +KGI+ ++V YN LI K +L E+ G+ P+
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T N +IS G R ++ M + +P TY ++I + C + +++ +++ +M
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGEM 659
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
K P L ++ +++ +G+ KA L ++MIEK I + T+ L
Sbjct: 660 SLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 164/344 (47%), Gaps = 7/344 (2%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
AY+ +I + + + V KM+ KG+ +VET+ I++ Y R ++ D+ M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ N+ ++ L++ LCK + +AQ + M+ R P ++ Y++L++G +
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
A +EM+ G ++V+Y ++D L G++ EA +++ ++ P F Y+ L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ YG ++ I + EM+R GIK + Y+ LI + C + R+ EM +
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SL 661
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMK 396
P+ N ++ G ++AF + ++MI K D TY +I + ++
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+ +M ++ P T++ ++ G C+ + M A V EM EKG
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 163/378 (43%), Gaps = 40/378 (10%)
Query: 119 DIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF-NVMDKYEVPQNLAAFNGLLSA 176
D+ +RN+G+ + ++ +++ + + + F N+++ P + + A
Sbjct: 130 DLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM-YGKAIQA 188
Query: 177 LCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
K +V K E+F+ MK R P + Y++L++G K + A + F EM++ P
Sbjct: 189 AVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 236 VVSYGIMVDILCKAGR-----------------------------------VDEAVEVVK 260
+++Y ++D CKAG V++A V+K
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
+M D +P +F +S+L Y + E A+ + G+K + + L+ A CK
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYT 379
K + +L + G+ PN N +I +G A M K +PD Y
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
+I+ FCE EM+ A K MK K PS+ T++ LI G + K +L+EM +
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 440 GIRPSRVTFGKLRQLLIK 457
G P+ V++G L L K
Sbjct: 489 GTMPNVVSYGTLINCLCK 506
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 11/303 (3%)
Query: 172 GLLSALCKSRNVRKA--QEIFDSMKGRFEPDLK---TYSILLEGWGKDPNLPKARETFRE 226
G+LS+L +S + A +E+F + P LK +Y +L + + +A + F
Sbjct: 76 GVLSSLLRSDSTPFASPKELFSAFS-LSSPSLKHDFSYLLLSVLLNESKMISEAADLFFA 134
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
+ + G P S +++D L K + + V ++ +++ P+ F+Y + +
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
+ ++ F M+ I V +YN LI CK + + ++ EM + + P+ T N
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+I G +++F+V RM EP T+ ++K + ++ A + K+MK
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK----EKRE 461
FVP TFS L +G N A A + E ++ G++ + T L L K EK E
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 462 DVL 464
++L
Sbjct: 375 EIL 377
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 154/335 (45%), Gaps = 39/335 (11%)
Query: 108 LARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
L R+ MWD+ ++++K N T+ V+ R K+++AV + ++ ++
Sbjct: 166 LYHFRETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 222
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREM 227
+FN ++S CK V A+ F +
Sbjct: 223 VSFNSIMSGYCKLGFVDMAKSF----------------------------------FCTV 248
Query: 228 VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI 287
+ G P V S+ I+++ LC G + EA+E+ DM+ + P S Y++L + + I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT-CNV 346
A + +M KG+ DV+ Y L+ C+ +LK+M S G NS C+V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
++S L GR D A +F +M PD Y+++I C+ + DMA+ ++ +M KR
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+P+ T AL+ GLCQ G ++A LL+ +I G
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 200/452 (44%), Gaps = 18/452 (3%)
Query: 18 FARMLSTGEPPPQEVAD-LTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFEN 76
F +L G P + L +C V + + L + +N+ GV + K F
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 77 AGMSAFRFFEWAER-QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVET 134
GM + + + + + V Y +++ ++ + ++ M ++G LN
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 135 FCIVM-RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
C VM + ++DEA+ FN M + +L A++ ++ LCK A ++D M
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 194 -KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
R P+ +T+ LL G + L +AR ++S+G + D+V Y I++D K+G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
+EA+E+ K + + P+ ++ L++ Y I +A ++ G+ VV Y L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR-RMIKIC 371
+ A+ K++ + +EM++ G+ P + T +VI L + + V R R+ + C
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 372 E------------PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
+ PD TY +I+ C + A + MKS+ S T++ LI+
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
LC G KA + + E+ + S+ + L
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 25/295 (8%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
L++ + IV+ YA++ ++EA+ F V+ + + ++A FN L+ CK++N+ +A++I
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 190 FDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
D +K P + +Y+ L++ + N E REM + G P V+Y ++ LC+
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
+ + V++ E E +ME +GI D +
Sbjct: 586 GWKHENCNHVLR-----------------------ERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE-VFRRM 367
YN +I C+ L+ M+S + +S T N++I SL G +A ++
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 368 IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+ YT +IK C + + +MA+K++ + + F S+ +SA+IN LC+
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
T ++ +L+ ++D++ +M+ + + YN+++ F + +K +V +
Sbjct: 122 STGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKE 181
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCE 387
+K+ N T + ++ L Q + + A R K P ++ ++ +C+
Sbjct: 182 IKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK 234
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+DMA + + VPS+++ + LINGLC G+ +A L +M + G+ P VT
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 448 FGKL 451
+ L
Sbjct: 295 YNIL 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 15/235 (6%)
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY- 274
L + TFR+ S G D++ + + + VD+++ ++K M D N ++ Y
Sbjct: 109 QLLQEEGTFRKWESTGLVWDMLLF-----LSSRLRMVDDSLYILKKMKDQNLNVSTQSYN 163
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
SVL H + D + E++ K Y+ ++ C+ K ++ L+ E
Sbjct: 164 SVLYHF----RETDKMWDVYKEIKDKNEHT----YSTVVDGLCRQQKLEDAVLFLRTSEW 215
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
+ P+ + N I+S G D A F ++K P ++ ++I C +
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
A+++ DM P T++ L G G A ++ +M++KG+ P +T+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 154/335 (45%), Gaps = 39/335 (11%)
Query: 108 LARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
L R+ MWD+ ++++K N T+ V+ R K+++AV + ++ ++
Sbjct: 166 LYHFRETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 222
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREM 227
+FN ++S CK V A+ F +
Sbjct: 223 VSFNSIMSGYCKLGFVDMAKSF----------------------------------FCTV 248
Query: 228 VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI 287
+ G P V S+ I+++ LC G + EA+E+ DM+ + P S Y++L + + I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT-CNV 346
A + +M KG+ DV+ Y L+ C+ +LK+M S G NS C+V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 347 IISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
++S L GR D A +F +M PD Y+++I C+ + DMA+ ++ +M KR
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+P+ T AL+ GLCQ G ++A LL+ +I G
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 200/452 (44%), Gaps = 18/452 (3%)
Query: 18 FARMLSTGEPPPQEVAD-LTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFEN 76
F +L G P + L +C V + + L + +N+ GV + K F
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 77 AGMSAFRFFEWAER-QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVET 134
GM + + + + + V Y +++ ++ + ++ M ++G LN
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 135 FCIVM-RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
C VM + ++DEA+ FN M + +L A++ ++ LCK A ++D M
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 194 -KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
R P+ +T+ LL G + L +AR ++S+G + D+V Y I++D K+G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
+EA+E+ K + + P+ ++ L++ Y I +A ++ G+ VV Y L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR-RMIKIC 371
+ A+ K++ + +EM++ G+ P + T +VI L + + V R R+ + C
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 372 E------------PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
+ PD TY +I+ C + A + MKS+ S T++ LI+
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
LC G KA + + E+ + S+ + L
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTL 696
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 25/295 (8%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
L++ + IV+ YA++ ++EA+ F V+ + + ++A FN L+ CK++N+ +A++I
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 190 FDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
D +K P + +Y+ L++ + N E REM + G P V+Y ++ LC+
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
+ + V++ E E +ME +GI D +
Sbjct: 586 GWKHENCNHVLR-----------------------ERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE-VFRRM 367
YN +I C+ L+ M+S + +S T N++I SL G +A ++
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 368 IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+ YT +IK C + + +MA+K++ + + F S+ +SA+IN LC+
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
T ++ +L+ ++D++ +M+ + + YN+++ F + +K +V +
Sbjct: 122 STGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKE 181
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCE 387
+K+ N T + ++ L Q + + A R K P ++ ++ +C+
Sbjct: 182 IKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK 234
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+DMA + + VPS+++ + LINGLC G+ +A L +M + G+ P VT
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 448 FGKL 451
+ L
Sbjct: 295 YNIL 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 15/235 (6%)
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY- 274
L + TFR+ S G D++ + + + VD+++ ++K M D N ++ Y
Sbjct: 109 QLLQEEGTFRKWESTGLVWDMLLF-----LSSRLRMVDDSLYILKKMKDQNLNVSTQSYN 163
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
SVL H + D + E++ K Y+ ++ C+ K ++ L+ E
Sbjct: 164 SVLYHF----RETDKMWDVYKEIKDKNEHT----YSTVVDGLCRQQKLEDAVLFLRTSEW 215
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
+ P+ + N I+S G D A F ++K P ++ ++I C +
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
A+++ DM P T++ L G G A ++ +M++KG+ P +T+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 185/416 (44%), Gaps = 45/416 (10%)
Query: 36 TETVCKVMMSSPGVTLDAALNQTGVRASPELVENVL------KRFENAGMSA---FRFFE 86
+ + + + G + L++ VR S LV VL ++N A +RFF
Sbjct: 78 SRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFL 137
Query: 87 WAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARA 145
W+ Q + HTV +YHL+++ A +Y+ MW +V +M G TF +++ A
Sbjct: 138 WSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEA 197
Query: 146 HKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYS 205
+AV F + ++N +L++L +K Y
Sbjct: 198 GLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLL---------------------GVKQYK 236
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
++ W +++M+ G SPDV++Y I++ + G++D + +M +
Sbjct: 237 LI--EW-----------VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARD 283
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P S+ Y++L+H G N+ A+ M+ GI V+ Y LI +A +
Sbjct: 284 GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEAC 343
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKM 384
+ L EM G P+ V+I+ + G D+A E+FR M +K P+ TY MI+
Sbjct: 344 KYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 403
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
C E A + K+M+S+ P+ +S L++ L + G +A ++ EM++KG
Sbjct: 404 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 26/365 (7%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N T+ ++++ + + +++A F + + + +L ++N L L + +A+ +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M + P + +Y+IL++G K L A+ M G PD V+YG ++ C
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G+VD A ++++M NNC+P ++ ++L+H+ RI +A + +M KG D V
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVT-----------------------PNSRTCNV 346
N ++ C + + ++K M +G P+ T +
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 347 IISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+++ L GR A +F M+ + +PD+ Y + I FC++ ++ A ++ KDM+ K
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK-EKREDVL 464
SL T+++LI GL + L++EM EKGI P+ T+ Q L + EK ED
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 465 TFLHE 469
L E
Sbjct: 650 NLLDE 654
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 175/419 (41%), Gaps = 65/419 (15%)
Query: 95 AHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYARAHKVDEAVY 153
A ++L+I +L ++ +M KG E TF I++R Y +A D+ +
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 154 TFNVMDKYEVPQN-----------------------------------LAAFNGLLSALC 178
N M+ + V N + FN +SALC
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 179 KSRNVRKAQEIFDSMK-----GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
K V A IF M+ G P+ TY+++L+G+ K L A+ F +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
+ SY I + L + G+ EA V+K M D P+ + Y++L+ + DA
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
M+R G+ D V Y L+ +C K + +L+EM N PN+ TCN+++ SL
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 354 QGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK---------- 402
GR A E+ R+M K D T +++ C E+D A++I K M+
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 403 -------------SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+P L T+S L+NGLC+ G +A L EM+ + ++P V +
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 157/299 (52%), Gaps = 8/299 (2%)
Query: 167 LAAFNGLLSALCKSRNVRKAQEIFDSMKGRF---EPDLKTYSILLEGWGKDPNLPKARET 223
L++ ++S KS ++ KA F ++ RF +P + Y++LLE K+ +
Sbjct: 75 LSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWL 134
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
+++MV G +P ++ +++ LC + VD A E+ +M + C P F + +LV Y
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
+ ++ ME G+ + V+YN ++ +FC+ + + +++++M G+ P+ T
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 344 CNVIISSLISQGRTDRAFEVFRRM-----IKICEPDADTYTMMIKMFCERNEMDMAMKIW 398
N IS+L +G+ A +F M + + P++ TY +M+K FC+ ++ A ++
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+ ++ + SL +++ + GL ++G ++A +L++M +KGI PS ++ L L K
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 205/469 (43%), Gaps = 70/469 (14%)
Query: 70 VLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNK 127
+LK F G+ A FE + R+ + ++++Y++ ++ L R ++ ++ +M +K
Sbjct: 297 MLKGFCKVGLLEDAKTLFE-SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK 355
Query: 128 GML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
G+ ++ ++ I+M + + +A +M + V + + LL C V A
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 187 QEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
+ + + M+ P+ T +ILL K + +A E R+M G D V+ I+VD
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 246 LCKAGRVDEAVEVVKDM-------------------DD----NNCMPTSFIYSVLVHTYG 282
LC +G +D+A+E+VK M DD NNC+P YS L++
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
R +A + F EM + ++ D V YN I FCK K + RVLK+ME G +
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKICE----PDADTYTMMIKMFCERNEMDMAMKIW 398
T N +I L G ++ FE+ M ++ E P+ TY I+ CE +++ A +
Sbjct: 596 TYNSLILGL---GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 399 KDMKSKRFVPSLHTFSALINGLCQ----------------------------------NG 424
+M K P++ +F LI C+ G
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAG 712
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLT-FLHEKIN 472
+KA LLE ++++G + L + L K+ +V + LH+ I+
Sbjct: 713 QLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 144/341 (42%), Gaps = 24/341 (7%)
Query: 124 MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
MRN + N T I++ + ++ EA M++ + N ++ LC S +
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 184 RKAQEIFDSMK-------GRFE-----------------PDLKTYSILLEGWGKDPNLPK 219
KA EI M+ G PDL TYS LL G K +
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 220 ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
A+ F EM+ PD V+Y I + CK G++ A V+KDM+ C + Y+ L+
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 280 TYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP 339
G++N+I + EM+ KGI ++ YN I C+ K ++ +L EM + P
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWK 399
N + +I + D A EVF + IC Y++M ++ A ++ +
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722
Query: 400 DMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+ + F + L+ LC+ A +L +MI++G
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 166/381 (43%), Gaps = 49/381 (12%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQN---LAAFNGLLSALCKSRNVRKAQEIF-DSM 193
V+ +A+++ +D+A F ++ + P+N + +N LL + K R V ++ D +
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLV-RSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
P T+++L+ + ARE F EM GC P+ ++GI+V CKAG D
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
+ +E++ M+ +P IY+ +V ++ E R +D+ +M +G+ D+V +N+ I
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 314 GAFCKANKFKNVRRVLKEME---------SNGVTPNS----------------------- 341
A CK K + R+ +ME N +T N
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 342 -------RTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDM 393
++ N+ + L+ G+ A V ++M K P +Y +++ C+ +
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A I MK P T+ L++G C G A LL+EM+ P+ T L
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439
Query: 454 LLIKEKR----EDVLTFLHEK 470
L K R E++L ++EK
Sbjct: 440 SLWKMGRISEAEELLRKMNEK 460
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 131/262 (50%), Gaps = 19/262 (7%)
Query: 213 KDPNLPK-ARETFREMVSAGCSPDVVSYGIMVD-------ILCKAGRVDEAVEVVKDMDD 264
K+ N P+ A F+ + S SP S+GI +D IL +A ++ E ++ + ++
Sbjct: 11 KNTNNPRLAWRIFKRIFS---SPSEESHGISLDATPTIARILVRA-KMHEEIQELHNLIL 66
Query: 265 NNCMPTSFIYSVL--VHTYGVENRIEDAIDAFLEMERKGI---KADVVVYNALIGAFCKA 319
++ + + + S+L V + N I+ A F ++ R K V +YN L+ + K
Sbjct: 67 SSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKE 125
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTY 378
+ + V + K+M G+ P + T N++I +L D A E+F M K C+P+ T+
Sbjct: 126 RRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTF 185
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
++++ +C+ D +++ M+S +P+ ++ +++ C+ G + ++E+M E
Sbjct: 186 GILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMRE 245
Query: 439 KGIRPSRVTFGKLRQLLIKEKR 460
+G+ P VTF L KE +
Sbjct: 246 EGLVPDIVTFNSRISALCKEGK 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
AY++ I + + + ++ M KG ++ET+ ++ +++ E + M
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNL 217
+ + N+ +N + LC+ V A + D M + P++ ++ L+E + K P+
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
A+E F VS C Y +M + L AG++ +A E+++ + D +F+Y L
Sbjct: 681 DMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK------ANKFKNVRRVLKE 331
V + ++ +E A +M +G D +I K AN F + + E
Sbjct: 740 VESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFAD---KMME 796
Query: 332 MES-----NGVTPNSR 342
M S N V PN+R
Sbjct: 797 MASVGEVANKVDPNAR 812
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 311 ALIGAFCKAN-------KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+++ F K+N +F+ VR E + P+ N+++ S I + R + +
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENK-----PSVYLYNLLLESCIKERRVEFVSWL 134
Query: 364 FRRMIKIC--EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
++ M+ +C P T+ ++I+ C+ + +D A +++ +M K P+ TF L+ G C
Sbjct: 135 YKDMV-LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+ G K LL M G+ P++V + + +E R D
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 9/302 (2%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSIL----LEGWGKDPNL 217
V + +N ++ +S KAQE+ D+M+ R PDL +++ L L+ G PNL
Sbjct: 221 VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL 280
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
A E + ++G PD ++Y ++ + +D AV+V +DM+ + C P + Y+ +
Sbjct: 281 --AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM 338
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ YG +A F+E+E KG D V YN+L+ AF + + V+ V ++M+ G
Sbjct: 339 ISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYTMMIKMFCERNEMDMAM 395
+ T N II QG+ D A ++++ M + PDA TYT++I + N A
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAA 458
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+ +M P+L T+SALI G + G +A M+ G +P + + + +L
Sbjct: 459 ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Query: 456 IK 457
++
Sbjct: 519 LR 520
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 174/387 (44%), Gaps = 5/387 (1%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMR 140
A FEW + ++ R ++ L R Q + +I T+ V+ + +M
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMG 233
Query: 141 KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRK--AQEIFDSMKGR-F 197
Y+R+ K +A + M + +L +FN L++A KS + A E+ D ++
Sbjct: 234 VYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGL 293
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
PD TY+ LL +D NL A + F +M + C PD+ +Y M+ + + G EA
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+ +++ P + Y+ L++ + E E + + +M++ G D + YN +I +
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 318 KANKFKNVRRVLKEMES-NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDA 375
K + ++ K+M+ +G P++ T V+I SL RT A + M+ + +P
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTL 473
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
TY+ +I + + + + A + M P +S +++ L + KA L +
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRD 533
Query: 436 MIEKGIRPSRVTFGKLRQLLIKEKRED 462
MI G PS + + L+KE R D
Sbjct: 534 MISDGHTPSYTLYELMILGLMKENRSD 560
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 160/347 (46%), Gaps = 20/347 (5%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ T+ ++ Y R EA F ++ + +N LL A + RN K +E++
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 191 DSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS-AGCSPDVVSYGIMVDILCK 248
M K F D TY+ ++ +GK L A + +++M +G +PD ++Y +++D L K
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGK 450
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
A R EA ++ +M D PT YS L+ Y + E+A D F M R G K D +
Sbjct: 451 ANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLA 510
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
Y+ ++ + N+ + + ++M S+G TP+ ++I L+ + R+D + R M
Sbjct: 511 YSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Query: 369 KICEPDA-DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
++C + + ++++K C D+A + K + + T +++ +G
Sbjct: 571 ELCGMNPLEISSVLVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHS 626
Query: 428 KACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLL 474
+A LLE + E R LI E L LH K+N L
Sbjct: 627 EAFELLEFLKEHASGSKR---------LITE----ALIVLHCKVNNL 660
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 180/387 (46%), Gaps = 12/387 (3%)
Query: 84 FFEWAERQRNYAHTVRAYHL--------MIESLARIRQYQIMWDIVTKMRNKGML-NVET 134
F E A + N A T + +H +IE+ + + +Q +V +R G +++T
Sbjct: 731 FPETAHQVVNQAET-KGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKT 789
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK 194
+ +M YA+ + A FN M + + + N LL ALC + + + + ++
Sbjct: 790 WNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ 849
Query: 195 G-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
F+ + ++L+ + + N+ + ++ + M +AG P + Y +M+++LCK RV
Sbjct: 850 DMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVR 909
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
+A +V +M++ N I++ ++ Y + + + ++ G++ D YN LI
Sbjct: 910 DAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICE 372
+C+ + + ++++M + G+ P T +IS+ Q ++A ++F ++ K +
Sbjct: 970 IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK 1029
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVL 432
D Y M+K+ + A K+ + MK+ P+L T L+ +GN +A +
Sbjct: 1030 LDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKV 1089
Query: 433 LEEMIEKGIRPSRVTFGKLRQLLIKEK 459
L + + + + + + + ++ K
Sbjct: 1090 LSNLKDTEVELTTLPYSSVIDAYLRSK 1116
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 131/321 (40%), Gaps = 11/321 (3%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA-QE 188
L +T ++ Y+ + + EA + ++ L+ CK N+ A E
Sbjct: 607 LENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDE 666
Query: 189 IFDS--MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDIL 246
F + G Y LL + + +A + F ++ +GC MV +
Sbjct: 667 YFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVY 726
Query: 247 CKAGRVDEAVEVVKDMDDNN----CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
CK G + A +VV + C P +Y+ ++ YG + + A + + G
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGR 783
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
D+ +N+L+ A+ + ++ R + M +G +P + N+++ +L GR + +
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 363 VFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
V + + + + +M+ F + KI+ MK+ ++P++ + +I LC
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 422 QNGNAMKACVLLEEMIEKGIR 442
+ A +++ EM E +
Sbjct: 904 KGKRVRDAEIMVSEMEEANFK 924
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P + + + ++ G N+ A++ F E + V VYNA++G + ++ KF + +
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAE-PTVGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 329 LKEMESNGVTPNSRTCNVIISS-LISQGRTDRAFEVFRRMIKIC--EPDADTYTMMIKMF 385
+ M G P+ + N +I++ L S G T M++ PDA TY ++
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSAC 307
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+ +D A+K+++DM++ R P L T++A+I+ + G A +A L E+ KG P
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 446 VTFGKLRQLLIKEKREDVLTFLHEKIN 472
VT+ L +E+ + + +++++
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQ 394
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 120/266 (45%), Gaps = 10/266 (3%)
Query: 93 NYAHTVRAYHLMIESLA---RIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKV 148
Y T+R Y +MIE L R+R +IM V++M + + + +++ Y
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAEIM---VSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSIL 207
+ V + + + + + +N L+ C+ R + + M+ +P L TY L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ +GK L +A + F E++S G D Y M+ I +G +A ++++ M +
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
PT +L+ +Y ++A ++ ++ + Y+++I A+ ++ + +
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 328 VLKEMESNGVTPNSR--TCNVIISSL 351
L EM+ G+ P+ R TC V +S
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASF 1149
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK-NVRRVLKE 331
+Y+ ++ Y + A + M ++G D++ +N LI A K+ N+ L +
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 332 MESN-GVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERN 389
M N G+ P++ T N ++S+ D A +VF M C+PD TY MI ++
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG 449
A +++ +++ K F P T+++L+ + N K + ++M + G +T+
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 450 KLRQLLIKEKREDVLTFLHEKINLL 474
+ + K+ + D+ L++ + L
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGL 431
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 193/407 (47%), Gaps = 15/407 (3%)
Query: 71 LKRFENAGMSAFRFF-----EWAERQRNYAHTVRAYHLMIESLARIRQY----QIMWDIV 121
L R EN +A + F E +R + +++ Y ++I L + + Q++ +
Sbjct: 15 LLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLK 74
Query: 122 TKMRNKGMLNVET-FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKS 180
T R ++ E FC V+ + R A++ F+ M +Y + + + N LLSAL K
Sbjct: 75 TDTR---IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKC 131
Query: 181 RNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYG 240
+ K +E S+ +PD TY+IL+ G + A + F EMV P V++G
Sbjct: 132 GELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 241 IMVDILCKAGRVDEAVEVVKDM-DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
++ LCK RV EA+++ DM PT IY+ L+ + A E
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
IK D +Y+ LI + KA + V +L+EM G P++ T NV+I+ + ++
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 360 AFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
A V M+ K +PD +Y M++ +F + + A +++DM + P ++ + +
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLT 465
GLC+ +A V+L+EM+ KG +P R Q L + + ++L+
Sbjct: 372 GLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILS 418
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 137/292 (46%), Gaps = 4/292 (1%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
T+ I++ +++ D+A+ F+ M K +V F L+ LCK V++A ++ M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 194 KGRF--EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
+ P + Y+ L++ + L A + E D Y ++ L KAGR
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
+E ++++M + C P + Y+VL++ + VEN E A EM KG+K DV+ YN
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KI 370
++G F + K++ + ++M G +P++ + ++ L + + A + M+ K
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 371 CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+P D ++ CE ++++ K+ + + +S +I +C+
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCK 444
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 11/265 (4%)
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
G GK P+ +A F EM C V S ++ L K G +++ E + +D+ P
Sbjct: 94 GRGKLPS--RALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KP 150
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
+ Y++L+H +DA+ F EM +K +K V + LI CK ++ K ++
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 330 KEM-ESNGVTPNSRTCNVIISSLISQGRTDRAF----EVFRRMIKICEPDADTYTMMIKM 384
+M + GV P +I +L G AF E + IK+ DA Y+ +I
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV---DAAIYSTLISS 267
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+ + I ++M K P T++ LING C ++ A +L+EM+EKG++P
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 445 RVTFGKLRQLLIKEKREDVLTFLHE 469
+++ + + + K+ + T+L E
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFE 352
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 115/240 (47%), Gaps = 4/240 (1%)
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMD-DNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
++ Y I++ L + DE +V+ + D +PT I+ +++ +G A+ F
Sbjct: 47 LLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMF 106
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
EM + + V N+L+ A K + + ++ L ++ G P++ T N++I
Sbjct: 107 DEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQS 165
Query: 355 GRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDM-KSKRFVPSLHT 412
G D A ++F M+K +P T+ +I C+ + + A+K+ DM K P++H
Sbjct: 166 GCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI 225
Query: 413 FSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKIN 472
+++LI LCQ G A L +E E I+ + L LIK R + ++ + E+++
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 181/384 (47%), Gaps = 8/384 (2%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
+V Y+ +I + + +M NK + V T+ +M Y K+++A+ +
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
+ M + ++ F LLS L ++ +R A ++F+ M + +P+ TY++++EG+ ++
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
++ KA E +EM G PD SY ++ LC G+ EA V + NC Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L+H + E ++E+A+ EM ++G+ D+V Y LI K K +LKEM
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDM 393
G+ P+ +I + G AF ++ MI + C P+ TYT +I C+ ++
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF----- 448
A + M+ VP+ T+ ++ L + M+ V L I KG+ + T+
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 449 GKLRQLLIKEKREDVLTFLHEKIN 472
G RQ I+E E + + + ++
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVS 819
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 188/440 (42%), Gaps = 45/440 (10%)
Query: 78 GMSAFRFFEWAERQRNYAHTV------RAYHLMIESLARIRQYQIMWDIVTKMRNKGM-L 130
G+ FR F A N +V Y +I SL ++ +++ M G +
Sbjct: 201 GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 260
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N+ + +++ + KV EAV + ++ ++ + L+ LCK + E+
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 191 DSMKG-RFEPDLKTYSILLEG-------------------WGKDPNL------------- 217
D M RF P S L+EG +G PNL
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 218 ---PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
+A F M G P+ V+Y I++D+ C+ G++D A+ + +M D + + Y
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L++ + I A EM K ++ VV Y +L+G +C K R+ EM
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
G+ P+ T ++S L G A ++F M + +P+ TY +MI+ +CE +M
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A + K+M K VP +++ LI+GLC G A +A V ++ + + + + + L
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 454 LLIKE-KREDVLTFLHEKIN 472
+E K E+ L+ E +
Sbjct: 621 GFCREGKLEEALSVCQEMVQ 640
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 177/409 (43%), Gaps = 55/409 (13%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMR 140
RFF + R + H+ ++ ++I +L + + ++ + + + + F ++
Sbjct: 87 GLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFS 146
Query: 141 KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFE 198
Y + + ++F+ L+ +SR V +F M K
Sbjct: 147 CYEKCK-----------------LSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLL 189
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P+++T S LL G K + A E F +MVS G PDV Y ++ LC+ + A E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+ M+ C Y+VL+ + ++ +A+ ++ K +K DVV Y L+ CK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 319 ANKF--------------------------KNVRR---------VLKEMESNGVTPNSRT 343
+F + +R+ ++K + GV+PN
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
N +I SL + A +F RM KI P+ TY+++I MFC R ++D A+ +M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
S++ +++LING C+ G+ A + EMI K + P+ VT+ L
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 157/398 (39%), Gaps = 73/398 (18%)
Query: 123 KMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
+M KG+ ++ TF ++ RA + +AV FN M ++ V N +N ++ C+
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 182 NVRKAQEIFDSM------------------------------------KGRFEPDLKTYS 205
++ KA E M KG E + Y+
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
LL G+ ++ L +A +EMV G D+V YG+++D K ++K+M D
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P IY+ ++ ++A + M +G + V Y A+I CKA
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 326 RRVLKEMES-----------------------------------NGVTPNSRTCNVIISS 350
+ +M+ G+ N+ T N++I
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 351 LISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
QGR + A E+ RMI PD TYT MI C RN++ A+++W M K P
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
++ LI+G C G KA L EM+ +G+ P+ T
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVET-FCIVMRKYARAHKVD 149
QR + Y ++I+ + + ++ + ++ +M ++G+ + + ++ ++
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE-PDLKTYSILL 208
EA +++M N + +++ LCK+ V +A+ + M+ P+ TY L
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 209 EGWGK-DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ K + ++ KA E + G + +Y +++ C+ GR++EA E++ M +
Sbjct: 760 DILTKGEVDMQKAVE-LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P Y+ +++ N ++ AI+ + M KGI+ D V YN LI C A +
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 328 VLKEMESNGVTPNSRTCNVIISS 350
+ EM G+ PN++T S+
Sbjct: 879 LRNEMLRQGLIPNNKTSRTTTSN 901
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDN-NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
+ +++ ++ RV + V V K M + +P S L+H A++ F +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
GI+ DV +Y +I + C+ + ++ ME+ G N NV+I L + +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 358 DRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
A + + + K +PD TY ++ C+ E ++ +++ +M RF PS S+L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+ GL + G +A L++ +++ G+ P+ + L L K ++
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 208/440 (47%), Gaps = 43/440 (9%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
S E +++KR E F A +Q+ + H Y +++++L R +++ + I+
Sbjct: 55 SHESAVSLMKR-ERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILH 113
Query: 123 KMRNKGMLNVET-FCIVMRKYARAHKVDEAVYTFNVM---------------------DK 160
+M+ + E+ F +MR ++R+ D+ + FN++ D
Sbjct: 114 QMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDS 173
Query: 161 YEV----------------PQNLAAFNGLLSALCKSRNVRKAQEIFDSMK--GRFEPDLK 202
EV N FN L+ CK+ ++ A + + MK G P+
Sbjct: 174 GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSI 233
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSA-GCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
TYS L++ +A E F +M+S G SPD V++ +M++ C+AG V+ A +++
Sbjct: 234 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 293
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M N C P + YS L++ + +I++A F E+++ G+K D V Y L+ FC+ +
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTM 380
++L EM+++ ++ T NVI+ L S+GR++ A ++ + + + +Y +
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
++ C E++ A+K M + P T++ L+ LC++G +L + G
Sbjct: 414 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 473
Query: 441 IRPSRVTFGKLRQLLIKEKR 460
+ P ++G + + + KE++
Sbjct: 474 LIPGPKSWGAVVESICKERK 493
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 133/277 (48%), Gaps = 5/277 (1%)
Query: 120 IVTKMRNKGML--NVETFCIVMRKYARAHKVDEAVYTF-NVMDKYEVPQNLAAFNGLLSA 176
+V +M+ G+ N T+ +M + EAV F +++ K + + FN +++
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 177 LCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
C++ V +A++I D M K P++ YS L+ G+ K + +A++TF E+ G D
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLD 337
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL 295
V Y +++ C+ G DEA++++ +M + C + Y+V++ E R E+A+
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 296 EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
+ +G+ + Y ++ A C + + + L M G+ P+ T N ++ L G
Sbjct: 398 QWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Query: 356 RTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEM 391
T+ V ++I P ++ +++ C+ ++
Sbjct: 458 YTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT-PNSRTCNVIISSLISQGRTDR 359
G++ + ++N L+ CK V++EM+ +G++ PNS T + ++ L + R+
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 360 AFEVFRRMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
A E+F MI + PD T+ +MI FC E++ A KI MK P+++ +SAL+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
NG C+ G +A +E+ + G++ V + L + D
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETD 355
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
+++MI R + + I+ M+ G NV + +M + + K+ EA TF+ +
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNL 217
K + + + L++ C++ +A ++ MK R D TY+++L G +
Sbjct: 330 KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRS 389
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A + + S G + SY I+++ LC G +++AV+ + M + P ++ L
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
V E + + R G+ + A++ + CK K +V +L + S
Sbjct: 450 VVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 40/349 (11%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEP 199
+ + KVD A +M++ + N+ +N ++ A C+ +N+ A+ IF M KG EP
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LEP 517
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV------- 252
+ TYSIL++G+ K+ + A + +M ++ + V Y +++ LCK G+
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 253 -----------------------------DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
D AVE ++M +N P ++ L++ +
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
NR++ A++ EM+ +K D+ Y ALI FCK N K + E+ G+ PN
Sbjct: 638 SNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSV 697
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
N +IS + G+ D A +++++M+ D TYT MI + +++A ++ ++
Sbjct: 698 YNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
VP L+NGL + G +KA +LEEM +K + P+ + + +
Sbjct: 758 DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV 806
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 184/376 (48%), Gaps = 5/376 (1%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIV 138
+A F + E Q+ V Y+ M+ + R++ + I ++M KG+ N T+ I+
Sbjct: 467 AATSFLKMME-QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSIL 525
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGR 196
+ + + A N M+ N +N +++ LCK KA+E+ ++ + R
Sbjct: 526 IDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+ +Y+ +++G+ K + A ET+REM G SP+VV++ +++ CK+ R+D A+
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLAL 645
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
E+ +M Y L+ + +N ++ A F E+ G+ +V VYN+LI F
Sbjct: 646 EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDA 375
K + K+M ++G++ + T +I L+ G + A +++ ++ + PD
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
+ +++ ++ + A K+ ++MK K P++ +S +I G + GN +A L +E
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDE 825
Query: 436 MIEKGIRPSRVTFGKL 451
M+EKGI F L
Sbjct: 826 MLEKGIVHDDTVFNLL 841
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 187/427 (43%), Gaps = 78/427 (18%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGMLNV----ETFCIVMRKYARAHKVDEAVYTFN 156
+ L +++ + + D++ +MR G L V ET+ V+ + + ++EAV +
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMR--GKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDP 215
M + +P ++ A L++ CK + KA ++F+ M+ PD +S+++E + K+
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 216 NLPKARETFREMVSA--------------GC----SPDV------------VSYGIMVD- 244
+ KA E + M S GC SP+ +++G M +
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNK 454
Query: 245 ---ILCKAGRVDEAVEVVKDMDD----------NNCM----------------------- 268
+ CK G+VD A +K M+ NN M
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 269 --PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
P +F YS+L+ + ++A D +M +A+ V+YN +I CK + +
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 327 RVLKEM-ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKM 384
+L+ + + + + + N II + G TD A E +R M + + P+ T+T +I
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
FC+ N MD+A+++ +MKS L + ALI+G C+ + A L E+ E G+ P+
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Query: 445 RVTFGKL 451
+ L
Sbjct: 695 VSVYNSL 701
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 181/406 (44%), Gaps = 15/406 (3%)
Query: 60 VRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWD 119
V +P L+ NV+ N S+ RF + T RA++ ++ + R ++ D
Sbjct: 141 VSNNPTLIPNVM--VNNLVDSSKRF--------GFELTPRAFNYLLNAYIRNKRMDYAVD 190
Query: 120 IVTKMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
M ++ ++ + V+ R++ +DEA +N M V + L+ A
Sbjct: 191 CFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASL 250
Query: 179 KSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSA-GCSPDV 236
+ R +A +IF + R EPD +S+ ++ K P+L A + REM G
Sbjct: 251 RERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV-LVHTYGVENRIEDAIDAFL 295
+Y ++ K G ++EAV V+ +M +P S I + LV+ Y N + A+D F
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFG-IPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 296 EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
ME +G+ D V+++ ++ FCK + + M+S + P+S + +I +
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 356 RTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
+ A E+F + + +FC++ ++D A K M+ K P++ ++
Sbjct: 430 SPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
++ C+ N A + EM+EKG+ P+ T+ L K K E
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 131/267 (49%), Gaps = 2/267 (0%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKV 148
+++ Y+ + +Y+ +I+ ++ + +M G NV TF ++ + +++++
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSIL 207
D A+ + M E+ +L A+ L+ CK +++ A +F + + P++ Y+ L
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ G+ + A + +++MV+ G S D+ +Y M+D L K G ++ A ++ ++ D
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI 761
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
+P ++ VLV+ + + A EM++K + +V++Y+ +I + R
Sbjct: 762 VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFR 821
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQ 354
+ EM G+ + N+++S + +
Sbjct: 822 LHDEMLEKGIVHDDTVFNLLVSGRVEK 848
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 183/406 (45%), Gaps = 45/406 (11%)
Query: 88 AERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYARAH 146
AE Y H ++ M+ L +++ D++ +M+ + + E + + R Y R H
Sbjct: 41 AEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVH 100
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYS 205
+ +++ F+ M ++ + A+ +L+ L + + A + + +M+ P + + +
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLN 160
Query: 206 ILLEGWGK-DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDD 264
+L++ + D + + F EM GC PD +YG ++ LC+ GR+DEA ++ +M +
Sbjct: 161 VLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE 220
Query: 265 NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN 324
+C PT Y+ L++ +++A+ EM+ KGI+ +V Y++L+ CK +
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
Query: 325 VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIK 383
+ + M + G PN T +I+ L + + A E+ RM ++ +PDA Y +I
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 384 MFC--------------------------------ERNEM---------DMAMKIWKDMK 402
FC NE+ A ++ M+
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMR 400
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
S+ + T +L+ LC+ G KA L++E++ G PS+ T+
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 12/307 (3%)
Query: 181 RNVRKAQEIFDSMKGRFE----PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
++V K+ +FDS + D ++ ++ A + M C V
Sbjct: 27 KDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENC---V 83
Query: 237 VSYGIMVDILCKAGRVD---EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
VS I++ I GRV +++ V M D +C P+ Y ++ EN++ A
Sbjct: 84 VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKF 143
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVR-RVLKEMESNGVTPNSRTCNVIISSLI 352
+ M G+ V N LI A C+ + + ++ EM G P+S T +IS L
Sbjct: 144 YKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC 203
Query: 353 SQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLH 411
GR D A ++F M+ K C P TYT +I C +D AM+ ++MKSK P++
Sbjct: 204 RFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
T+S+L++GLC++G +++A L E M+ +G RP+ VT+ L L KE++ L +++
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 472 NLLVKEP 478
NL +P
Sbjct: 324 NLQGLKP 330
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 150/340 (44%), Gaps = 45/340 (13%)
Query: 75 ENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLAR-IRQYQIMWDIVTKMRNKGM-LNV 132
EN AF+F++ R+ TV + +++I++L R I +M +G +
Sbjct: 134 ENQLNLAFKFYK-NMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDS 192
Query: 133 ETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS 192
T+ ++ R ++DEA F M + + + + L++ LC S+NV +A +
Sbjct: 193 YTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE 252
Query: 193 MKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
MK + EP++ TYS L++G KD +A E F M++ GC P++V+Y ++ LCK +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID------------------- 292
+ EAVE++ M+ P + +Y ++ + ++ +A +
Sbjct: 313 IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 293 ----------------------AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
+L M +GI +V +L+ CK +F+ +++
Sbjct: 373 HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
E+ ++G P+ T ++I + + A + R + I
Sbjct: 433 EIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDLDI 472
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
Query: 165 QNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLE---GWGKDPNLPKAR 221
+ ++F ++ L + + A+++ MK E + + ILL G+G+ +
Sbjct: 49 HDQSSFGYMVLRLVSANKFKAAEDLIVRMK--IENCVVSEDILLSICRGYGRVHRPFDSL 106
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
F +M C P +Y ++ IL + +++ A + K+M + PT +VL+
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 282 GVENRIEDA-IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
+ DA + FLEM ++G D Y LI C+ + +++ EM P
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWK 399
T +I+ L D A M K EP+ TY+ ++ C+ AM++++
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 400 DMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
M ++ P++ T++ LI GLC+ +A LL+ M +G++P +GK+
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 192/428 (44%), Gaps = 55/428 (12%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVMRKYARAHKVDEAVYTFNVM- 158
++ ++ L R M D+V KM K +V T I++ ++ +VDEA+ F M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 159 -----DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK--GRFEPDLKTYSILLEGW 211
D + + FN L+ LCK +++A+E+ MK R P+ TY+ L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 212 GKDPNLPKARET-----------------------------------FREMVSAGCSPDV 236
+ L A+E F +M G +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
V+Y ++ C V++A+ + M + C P + IY L+ R DAI +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
++ G D++ YN LIG FC N + V +L +ME G P+S T N +IS G+
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF---GK 593
Query: 357 TDRAFEVFRRMIKI-----CEPDADTYTMMIKMFCERNEMDMAMKIWKDMK-SKRFVPSL 410
+ FE RM++ +P TY +I +C E+D A+K++KDM + P+
Sbjct: 594 -HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLI-KEKREDVLTFLHE 469
++ LIN + GN +A L EEM K +RP+ T+ L + L K + E +L + E
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Query: 470 KINLLVKE 477
+ LV +
Sbjct: 713 MVEHLVNQ 720
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 171/350 (48%), Gaps = 5/350 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
++ +I+ L ++ + + +++ +M+ + + N T+ ++ Y RA K++ A + M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNL 217
+ E+ N+ N ++ +C+ + A F D K + ++ TY L+ N+
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
KA + +M+ AGCSPD Y ++ LC+ R +A+ VV+ + + Y++L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ + +N E + +ME++G K D + YN LI F K F++V R++++M +G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPDADTYTMMIKMFCERNEMDMAM 395
P T +I + S G D A ++F+ M P+ Y ++I F + A+
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+ ++MK K P++ T++AL L + L++EM+E + R
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQIR 722
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 158/358 (44%), Gaps = 31/358 (8%)
Query: 105 IESLARIRQYQIMWDIVTK-MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEV 163
I SL + + WDI++ M+NK L F ++ R + MD+ ++
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARET 223
++ L++ LCKSR V +A E+F+ M+G+ D N+ KA
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGK--------------RTDDGNVIKA--- 368
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD-DNNCMPTSFIYSVLVHTYG 282
D + + ++D LCK GR+ EA E++ M + C+P + Y+ L+ Y
Sbjct: 369 -----------DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYC 417
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
++E A + M+ IK +VV N ++G C+ + +ME GV N
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T +I + S ++A + +M++ C PDA Y +I C+ A+++ + +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
K F L ++ LI C NA K +L +M ++G +P +T+ L K K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 148/328 (45%), Gaps = 15/328 (4%)
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
+++R + R V+++V + +D +N N ++ L ++ V A ++ D M +
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 197 ---FEPDLKTYSILLEGWGKDPNLPKAR--ETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
F P+ T I+L K+ L + + S G SP+ V + LCK R
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
+ A +++ D+ N + ++ L+ G I D L+M+ I+ DVV
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGI 334
Query: 312 LIGAFCKANKFKNVRRVLKEM------ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
LI CK+ + V ++M + N + +S N +I L GR A E+
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 366 RMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
RM + C P+A TY +I +C +++ A ++ MK P++ T + ++ G+C++
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 424 GNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A V +M ++G++ + VT+ L
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 165/344 (47%), Gaps = 3/344 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y+ +I + + R + + ++ M+ G++ N T+ ++M + K+ +A F+ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ + ++ + L+S C+ N+++A +FD + + P TY L++G K +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
A EM S G + V + ++D C+ G VDEA + M+ F + +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ R ++A M G+K V Y LI +CK + +R+ EM S GV
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMK 396
PN+ T NV+I + QG+ A ++ M +PD+ TYT +I C + +D AM+
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
++ +M K + T++ +I+GL + G + +A L +EM KG
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 180/378 (47%), Gaps = 3/378 (0%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
TV + +++E L R + + ++ + KG+ T+ ++ Y +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKD 214
VM K V N + L+ K+ + A+++FD M+ R E D+ Y+ L+ +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
N+ +A F E+ G SP +YG ++D +CK G + A ++ +M T ++
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L+ Y + +++A + ME+KG +ADV N + F + ++ ++ L M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDM 393
GV ++ + +I +G + A +F M K +P+A TY +MI +C++ ++
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A K+ +M++ P +T+++LI+G C N +A L EM KG+ + VT+ +
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 454 LLIKEKREDVLTFLHEKI 471
L K + D L++++
Sbjct: 583 GLSKAGKSDEAFGLYDEM 600
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 141/275 (51%), Gaps = 3/275 (1%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
AF F+ ++ + + Y +I+ + ++ + ++ +M++KG+ + F ++
Sbjct: 348 AFLLFDELT-EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQE-IFDSMKGRFE 198
Y R VDEA ++VM++ ++ N + S + + +A++ +F M+G +
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
+Y+ L++ + K+ N+ +A+ F EM S G P+ ++Y +M+ CK G++ EA ++
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+M+ N P S+ Y+ L+H + + +++A+ F EM KG+ + V Y +I K
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
A K + EM+ G T +++ +I S+ S
Sbjct: 587 AGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 3/296 (1%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKV 148
R+R V Y +I R + + + ++ KG+ + T+ ++ + ++
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSIL 207
A N M V FN L+ C+ V +A I+D M+ + F+ D+ T + +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ + +A++ M+ G VSY ++D+ CK G V+EA + +M
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P + Y+V+++ Y + +I++A ME G+ D Y +LI C A+ R
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMI 382
+ EM G+ NS T V+IS L G++D AF ++ M K D YT +I
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
F MV G S D S + + K R+D +E+ + M D+ T + +++V
Sbjct: 177 FDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCR 236
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
+E + E KGIK + YN +I A+ K F V VLK M+ +GV N T
Sbjct: 237 RGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVT 296
Query: 344 CNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+++ + G+ A ++F M + E D YT +I C + M A ++ ++
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
K PS +T+ ALI+G+C+ G A +L+ EM KG+ ++V F L
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 189 IFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC 247
+FD M K D ++ + L K + E FR MV +G V S I+V+ LC
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 248 KAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE-MERKGIKADV 306
+ G V+++ +++K+ P ++ Y+ +++ Y V+ R ++ L+ M++ G+ +
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY-VKQRDFSGVEGVLKVMKKDGVVYNK 294
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
V Y L+ K K + ++ EM G+ + +IS +G RAF +F
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 367 MI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
+ K P + TY +I C+ EM A + +M+SK + F+ LI+G C+ G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+A ++ + M +KG + T + + KR D
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 176/405 (43%), Gaps = 45/405 (11%)
Query: 47 PGVTLDAALNQTGVRASPELVENVLK------RFEN---AGMSAFRFFEWAERQRNYAHT 97
PG +AL++ V S LV VL F+N A++FF W Q N+ HT
Sbjct: 92 PGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHT 151
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNV 157
YHL+++ A +Y+ M ++ +M +
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEM--------------------------------I 179
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPN 216
D Y P FN L+ ++ R E F S + P +Y+ +L
Sbjct: 180 KDGY--PTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQ 237
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ +M+ G +PDV++Y I++ + G+ D ++ +M + P + Y++
Sbjct: 238 YKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNI 297
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+H N+ A++ M G++ V+ + LI +A K + + + E G
Sbjct: 298 LLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG 357
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAM 395
TP+ V+I+ IS G ++A E+F+ M + + P+ TY MI+ FC + A
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEAC 417
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
+ K+M+S+ P+ +S L+N L G ++A ++++M+EKG
Sbjct: 418 ALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 2/264 (0%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKAR 221
+ N+ ++ L++ LCKS + A+ M + P++ T+S L++ + K L K
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
++ M+ P+V +Y ++ LC RVDEA++++ M C P YS L + +
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
+R++D I +M ++G+ A+ V N LI + +A K V M SNG+ PN
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
R+ N++++ L + G ++A F M K + D TYT+MI C+ + A ++
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYK 318
Query: 401 MKSKRFVPSLHTFSALINGLCQNG 424
+K KR P ++ +I L + G
Sbjct: 319 LKFKRVEPDFKAYTIMIAELNRAG 342
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 15/305 (4%)
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
V FC+ ++ + +AVY M+K + +++ L+ LCK+R V A E+
Sbjct: 20 VNGFCL-------SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLK 72
Query: 192 SMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
MK R P++ TYS L+ G K L A EM S +P+V+++ ++D K G
Sbjct: 73 RMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRG 132
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
++ + V K M + P F YS L++ + NR+++AI M KG +VV Y+
Sbjct: 133 KLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYS 192
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK- 369
L F K+++ + ++L +M GV N+ +CN +I G+ D A VF M
Sbjct: 193 TLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN 252
Query: 370 ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
P+ +Y +++ E++ A+ ++ M+ R + T++ +I+G+C KA
Sbjct: 253 GLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMC------KA 306
Query: 430 CVLLE 434
C++ E
Sbjct: 307 CMVKE 311
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 1/253 (0%)
Query: 193 MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
MK EPD+ T S L+ G+ ++ A +M G DVV I++D LCK V
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
A+EV+K M D P YS L+ R+ DA EM+ K I +V+ ++AL
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSAL 124
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KIC 371
I A+ K K V V K M + PN T + +I L R D A ++ MI K C
Sbjct: 125 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACV 431
P+ TY+ + F + + +D +K+ DM + + + + LI G Q G A
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 244
Query: 432 LLEEMIEKGIRPS 444
+ M G+ P+
Sbjct: 245 VFGYMTSNGLIPN 257
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
+M+ G PD+V+ +V+ C + + +AV V M+ + ++L+ T
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+ A++ M+ +GI +VV Y++LI CK+ + + R L EM+S + PN T +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 346 VIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+I + +G+ + V++ MI++ +P+ TY+ +I C N +D A+K+ M SK
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
P++ T+S L NG ++ LL++M ++G+ + V+
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 225
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P S LV+ + + N I+DA+ +ME+ GIK DVVV LI CK V
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCE 387
LK M+ G++PN T + +I+ L GR A M K P+ T++ +I + +
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
R ++ ++K M P++ T+S+LI GLC + +A +L+ MI KG P+ VT
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 448 FGKLRQLLIKEKRED 462
+ L K R D
Sbjct: 191 YSTLANGFFKSSRVD 205
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 188/377 (49%), Gaps = 8/377 (2%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFN-V 157
Y +++SL + Y+ + ++M +G+ +++ + ++M +A + EA TF +
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPN 216
++ +VP N+ + L+ LCK+ ++ A+ I M + P++ TYS ++ G+ K
Sbjct: 356 LEDNQVP-NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L +A R+M P+ +YG ++D L KAG+ + A+E+ K+M ++I
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
LV+ RI++ +M KG+ D + Y +LI F K + +EM+ G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 337 VTPNSRTCNVIISSLISQGR--TDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMA 394
+ + + NV+IS ++ G+ D A++ R K EPD T+ +M+ ++ + +
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAYKGMRE--KGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
+K+W MKS PSL + + ++ LC+NG +A +L +M+ I P+ T+
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 455 LIKEKREDVLTFLHEKI 471
K KR D + HE +
Sbjct: 653 SSKHKRADAIFKTHETL 669
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 167/341 (48%), Gaps = 11/341 (3%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFN 156
V A +++I S ++ + ++ +RN+ + ++ T+ V+ DEA +
Sbjct: 129 VFALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLS 185
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPN 216
M K + + ++N L+ CK N +A+ + D + E +L T++ILL + N
Sbjct: 186 EMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS---ELNLITHTILLSSY---YN 239
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L E +R+MV +G PDVV++ +++ LCK G+V E ++++M++ + P Y+
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 299
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
LV + N A+ + +M +GI D+VVY L+ KA + + K + +
Sbjct: 300 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAM 395
PN T ++ L G A + +M+ K P+ TY+ MI + ++ ++ A+
Sbjct: 360 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 419
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
+ + M+ + VP+ T+ +I+GL + G A L +EM
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 169/374 (45%), Gaps = 17/374 (4%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKV 148
++R V +Y+++I + + + W MR KG+ ++ TF I+M +
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSIL 207
+ + ++ M + +L + N ++ LC++ + +A I + M P+L TY I
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
L+ K +T ++S G Y ++ LCK G +A V+ DM+
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
+P + ++ L+H Y V + + A+ + M GI +V YN +I A K V +
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFC 386
L EM+S G+ P+ T N +IS G + ++ MI P TY ++I F
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ---------NGNAM---KACVLLE 434
+M A ++ K+M + P+ T+ +I+GLC+ N AM +A LL+
Sbjct: 830 NVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLK 889
Query: 435 EMI-EKGIRPSRVT 447
EM+ EKG P T
Sbjct: 890 EMVEEKGYIPCNQT 903
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 161/351 (45%), Gaps = 4/351 (1%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
++ L RI + + + +V M +KG+ L+ + ++ + + + A+ M +
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKAR 221
+P ++ ++N L+S + K V A + M+ + EPD+ T++I++ K +
Sbjct: 535 MPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
+ + +M S G P ++S I+V +LC+ G+++EA+ ++ M P Y + + T
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
R + + GIK VYN LI CK K V+ +ME+ G P++
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T N ++ +A + M++ P+ TY +I+ + + K +
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
MKS+ P T++ALI+G + GN + + EMI G+ P T+ L
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 174/377 (46%), Gaps = 17/377 (4%)
Query: 43 MMSSPGVTLD---AALNQTGVRASPELVENVLK--RFENAGMSAFRFFEWAERQRNYAHT 97
++SSP LD LNQ V S LV V++ + E + RFF W+ + +
Sbjct: 43 IVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLH 102
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMR--NKGMLNVETFCIVMRKYARAHKVDEAVYTF 155
+ ++ ++ LA + + M +++ +R N+ M + +TF IV + K ++A+ F
Sbjct: 103 DKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAM-DKQTFSIVAETLVKVGKEEDAIGIF 161
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEP-DLKTYSILLEGWGKD 214
++DK+ PQ+ ++SALC +V++A + K +L Y LL GW
Sbjct: 162 KILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQ 221
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCK-------AGRVDEAVEVVKDMDDNNC 267
N+ +AR ++M SAG +PD+ + ++ LC+ +G V EA+ ++ +M
Sbjct: 222 RNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKI 281
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
PTS Y++L+ G R+ ++ +M+R G D Y ++ +F +
Sbjct: 282 QPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQ 341
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPD-ADTYTMMIKMFC 386
++ EM G P + +I L R + A ++F +M + Y ++I C
Sbjct: 342 IVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLC 401
Query: 387 ERNEMDMAMKIWKDMKS 403
+ + ++W++ S
Sbjct: 402 KGGNFEKGRELWEEALS 418
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRK--------AQEIFDSMKG-RFE 198
V EA M + +L FN LL+ LC+ RNV + A I M+ + +
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCE-RNVNRNPSGLVPEALNIMLEMRSYKIQ 282
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P +Y+ILL G+ + ++ + +M +GC PD SY +V +L GR + ++
Sbjct: 283 PTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQI 342
Query: 259 VKDMDDNNCMPT-SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
V +M + P F Y ++ GVE R+ A+ F +M+R + VY+ LI C
Sbjct: 343 VDEMIERGFRPERKFYYDLIGVLCGVE-RVNFALQLFEKMKRSSVGGYGQVYDLLIPKLC 401
Query: 318 KANKFKNVRRVLKEMESNGVT 338
K F+ R + +E S VT
Sbjct: 402 KGGNFEKGRELWEEALSIDVT 422
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 44/311 (14%)
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGRFEP-DLKTYSILLEGWGKDPNLPKARETFREMV 228
FN +L L + ++ Q + ++ D +T+SI+ E K A F+ +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
C D + ++ LC G V A+ V+ D +Y L+ + V+ ++
Sbjct: 166 KFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVK 225
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN-------VRRVLKEMESNGVTPNS 341
+A +M+ GI D+ +N+L+ C+ N +N ++ EM S + P S
Sbjct: 226 EARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTS 285
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+ N+++S L R + ++ +M + C+PD +Y ++++
Sbjct: 286 MSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL--------------- 330
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+ G GN +++EMIE+G RP R + L +L +R
Sbjct: 331 ---------------YLTGRFGKGNQ-----IVDEMIERGFRPERKFYYDLIGVLCGVER 370
Query: 461 EDVLTFLHEKI 471
+ L EK+
Sbjct: 371 VNFALQLFEKM 381
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 151/311 (48%), Gaps = 12/311 (3%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V TF +M +V +A+ + M V + + +++ LCK + A +
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGDTESALNLL 64
Query: 191 DSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M+ + + Y+ +++ KD + A+ F EM G PDV++Y M+D C++
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
GR +A ++++DM + P +S L++ E ++ +A + + +M R+GI + Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF----R 365
N++I FCK ++ + +R+L M S +P+ T + +I+ R D E+F R
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 366 RMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
R I + TYT +I FC+ ++D A + M S P+ TF +++ LC
Sbjct: 245 RGIV---ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 426 AMKACVLLEEM 436
KA +LE++
Sbjct: 302 LRKAFAILEDL 312
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 4/295 (1%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFR 225
++ F L++ LC V +A + D M E + Y ++ G K + A
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRM---VEEGHQPYGTIINGLCKMGDTESALNLLS 65
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
+M VV Y ++D LCK G A + +M D P YS ++ ++
Sbjct: 66 KMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
R DA +M + I DVV ++ALI A K K + +M G+ P + T N
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 346 VIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+I Q R + A + M K C PD T++ +I +C+ +D M+I+ +M +
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
V + T++ LI+G CQ G+ A LL MI G+ P+ +TF + L +K
Sbjct: 246 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 136/273 (49%), Gaps = 2/273 (0%)
Query: 99 RAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNV 157
+ Y +I L ++ + ++++KM + +V + ++ + + A F
Sbjct: 42 QPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE 101
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPN 216
M + ++ ++G++ + C+S A+++ D ++ + PD+ T+S L+ K+
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ +A E + +M+ G P ++Y M+D CK R+++A ++ M +C P +S
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L++ Y R+++ ++ F EM R+GI A+ V Y LI FC+ + +L M S+G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
V PN T +++SL S+ +AF + + K
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
MV GC PDVV++ +++ LC GRV +A+ +V M + P Y +++
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
E A++ +ME IKA VV+YNA+I CK + + + EM G+ P+ T +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 347 IISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+I S GR A ++ R MI + PD T++ +I + ++ A +I+ DM +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
P+ T++++I+G C+ A +L+ M K P VTF L K KR D
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 128/257 (49%), Gaps = 5/257 (1%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIV 138
SA E AH V Y+ +I+ L + + ++ T+M +KG+ +V T+ +
Sbjct: 59 SALNLLSKMEETHIKAHVV-IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGR 196
+ + R+ + +A M + ++ ++ F+ L++AL K V +A+EI+ M +G
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
F P TY+ +++G+ K L A+ M S CSPDVV++ +++ CKA RVD +
Sbjct: 178 F-PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
E+ +M + + Y+ L+H + ++ A D M G+ + + + +++ +
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 317 CKANKFKNVRRVLKEME 333
C + + +L++++
Sbjct: 297 CSKKELRKAFAILEDLQ 313
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 172/376 (45%), Gaps = 18/376 (4%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAV-YTFNV 157
AY ++ L + +V KM + G N T+ ++R +++++ + +
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDP 215
M K P N ++ LL A K R +A ++ D + KG EP+L +Y++LL G+ K+
Sbjct: 203 MQKGLAP-NAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG-EPNLVSYNVLLTGFCKEG 260
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
A FRE+ + G +VVSY I++ LC GR +EA ++ +MD + P+ Y+
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKG--IKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
+L+++ R E A+ EM + + YN +I CK K V + L EM
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI---KICEPDADTYTMMIKMFCERNE 390
PN T N I S + AF + + + K C D Y +I C +
Sbjct: 381 YRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCT--HDFYKSVITSLCRKGN 438
Query: 391 MDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG---NAMKACVLLEEMIEKGIRPSRVT 447
A ++ +M F P HT+SALI GLC G AM+ ++EE + +P+
Sbjct: 439 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEE--SENCKPTVDN 496
Query: 448 FGKLRQLLIKEKREDV 463
F + L K +R D+
Sbjct: 497 FNAMILGLCKIRRTDL 512
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 164/360 (45%), Gaps = 39/360 (10%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV ++ +A+++ +A+ +M + + +A+ L++ LCK NV A ++
Sbjct: 105 NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLV 164
Query: 191 DSMKGRFEP-DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+ M+ P + TY+ L+ G +L ++ + ++ G +P+ +Y +++ K
Sbjct: 165 EKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKE 224
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
DEAV+++ ++ P Y+VL+ + E R +DA+ F E+ KG KA+VV Y
Sbjct: 225 RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
N L+ C +++ +L EM+ P+ T N++I+SL GRT++A +V + M K
Sbjct: 285 NILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Query: 370 ICEP---DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL---------- 416
A +Y +I C+ ++D+ +K +M +R P+ T++A+
Sbjct: 345 GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKV 404
Query: 417 -------------------------INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
I LC+ GN A LL EM G P T+ L
Sbjct: 405 QEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSAL 464
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 190 FDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
F ++PDL + S + +PNL + +V+ G P+V ++ LCKA
Sbjct: 60 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 119
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
R+ +A+ V++ M + +P + Y+ LV+ + A+ +ME G ++ V Y
Sbjct: 120 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 179
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI- 368
NAL+ C + ++ + G+ PN+ T + ++ + + TD A ++ +I
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239
Query: 369 KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
K EP+ +Y +++ FC+ D AM +++++ +K F ++ +++ L+ LC +G +
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 429 ACVLLEEMIEKGIRPSRVTFGKL-RQLLIKEKREDVLTFLHE 469
A LL EM PS VT+ L L + E L L E
Sbjct: 300 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 188/436 (43%), Gaps = 53/436 (12%)
Query: 43 MMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYH 102
+M S G+ DA+ A LV + KR N G A + E E ++TV Y+
Sbjct: 131 LMVSSGIIPDAS-------AYTYLVNQLCKR-GNVGY-AMQLVEKMEDHGYPSNTV-TYN 180
Query: 103 LMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
++ L + V ++ KG+ N T+ ++ + DEAV + +
Sbjct: 181 ALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK 240
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKA 220
NL ++N LL+ CK A +F + + F+ ++ +Y+ILL D +A
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA 300
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM--PTSFIYSVLV 278
EM +P VV+Y I+++ L GR ++A++V+K+M N T+ Y+ ++
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVI 360
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK----------------- 321
E +++ + EM + K + YNA IG+ C+ N
Sbjct: 361 ARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQK 419
Query: 322 ------FKNV-------------RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
+K+V ++L EM G P++ T + +I L +G A E
Sbjct: 420 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 479
Query: 363 VFRRM--IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
V M + C+P D + MI C+ D+AM++++ M K+ +P+ T++ L+ G+
Sbjct: 480 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Query: 421 CQNGNAMKACVLLEEM 436
A +L+E+
Sbjct: 540 AHEDELELAKEVLDEL 555
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 132/274 (48%), Gaps = 5/274 (1%)
Query: 195 GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE 254
G +P++ + LL K L KA MVS+G PD +Y +V+ LCK G V
Sbjct: 100 GGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGY 159
Query: 255 AVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIG 314
A+++V+ M+D+ + Y+ LV + + ++ + +KG+ + Y+ L+
Sbjct: 160 AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE 219
Query: 315 AFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEP 373
A K ++L E+ G PN + NV+++ +GRTD A +FR + K +
Sbjct: 220 AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
+ +Y ++++ C + A + +M PS+ T++ LIN L +G +A +L
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339
Query: 434 EEMIEKGIRPSRVT---FGKLRQLLIKEKREDVL 464
+EM KG RVT + + L KE + D++
Sbjct: 340 KEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLV 372
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
E + D+ + G K +V L+ CKAN+ K RV++ M S+G+ P
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIP---- 139
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
DA YT ++ C+R + AM++ + M+
Sbjct: 140 ------------------------------DASAYTYLVNQLCKRGNVGYAMQLVEKMED 169
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDV 463
+ + T++AL+ GLC G+ ++ +E +++KG+ P+ T+ L + KE+ D
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 464 LTFLHEKINLLVKEP 478
L ++I + EP
Sbjct: 230 AVKLLDEIIVKGGEP 244
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 173/379 (45%), Gaps = 14/379 (3%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y+ +I + + I ++ +M + G+ N TF ++ + EA+ F +M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK------GRFEPDLKTYSILLEGWG 212
+ + + ++ LL LCK+ A+ + MK GR TY+ +++G
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-----TYTGMIDGLC 454
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
K+ L +A EM G PD+V+Y +++ CK GR A E+V + P
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
IYS L++ +++AI + M +G D +N L+ + CKA K ++ M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEM 391
S+G+ PN+ + + +I+ + G +AF VF M K+ P TY ++K C+ +
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A K K + + ++ L+ +C++GN KA L EM+++ I P T+ L
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 452 RQLLIKEKREDVLTFLHEK 470
L + K + V+ L K
Sbjct: 695 ISGLCR-KGKTVIAILFAK 712
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 179/429 (41%), Gaps = 89/429 (20%)
Query: 78 GMSAFRFFEWAERQRNYA--HTVRAYHLMIESLARIRQYQIMWDIVTK---MRNK----- 127
G A +F +W +Q H V+ + L R R Y I+ + M K
Sbjct: 90 GKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF 149
Query: 128 GML---------NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
G L N + I++R Y R + +++ F +M Y ++ N +L ++
Sbjct: 150 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 209
Query: 179 KSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
KS D+ +S L +EM+ PDV +
Sbjct: 210 KS-----------------GEDVSVWSFL-----------------KEMLKRKICPDVAT 235
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
+ I++++LC G +++ +++ M+ + PT Y+ ++H Y + R + AI+ M+
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 299 RKGIKADVVVYNALIGAFCKANK-----------------------------FKNVRRV- 328
KG+ ADV YN LI C++N+ F N +V
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355
Query: 329 -----LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMI 382
L EM S G++PN T N +I IS+G A ++F M K P +Y +++
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
C+ E D+A + MK T++ +I+GLC+NG +A VLL EM + GI
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 443 PSRVTFGKL 451
P VT+ L
Sbjct: 476 PDIVTYSAL 484
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 177/420 (42%), Gaps = 42/420 (10%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
+R V ++++I L ++ ++ KM G + T+ V+ Y + +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILL 208
A+ + M V ++ +N L+ LC+S + K + M+ R P+ TY+ L+
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDV-------------------------------- 236
G+ + + A + EM+S G SP+
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 237 ---VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
VSYG+++D LCK D A M N Y+ ++ +++A+
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
EM + GI D+V Y+ALI FCK +FK + ++ + G++PN + +I +
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525
Query: 354 QGRTDRAFEVFRRMIKICEP-DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
G A ++ MI D T+ +++ C+ ++ A + + M S +P+ +
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 413 FSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK----EKREDVLTFLH 468
F LING +G +KA + +EM + G P+ T+G L + L K + E L LH
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 161/372 (43%), Gaps = 38/372 (10%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
T+ +++ + + EA + + +N LL+A+CKS N+ KA +F M
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 194 KGR-FEPDLKTYSILLEG------------WGKDPN-----LP----------------- 218
R PD TY+ L+ G + K+ LP
Sbjct: 680 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 219 -KARETFRE-MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
KA FRE M + G +PD+V+ M+D + G++++ +++ +M + N P Y++
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+H Y + + + + GI D + ++L+ C++N + ++LK G
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 859
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAM 395
V + T N++IS + G + AF++ + M + D DT M+ + + +
Sbjct: 860 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 919
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+ +M + P + LINGLC+ G+ A V+ EEMI I P V + + L
Sbjct: 920 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979
Query: 456 IKEKREDVLTFL 467
K + D T L
Sbjct: 980 AKCGKADEATLL 991
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 4/354 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
+ Y +I ++ +++ +IV ++ G+ N + ++ R + EA+ +
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDP 215
M ++ FN L+++LCK+ V +A+E M P+ ++ L+ G+G
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
KA F EM G P +YG ++ LCK G + EA + +K + + +Y+
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 657
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
L+ + A+ F EM ++ I D Y +LI C+ K KE E+
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717
Query: 336 G-VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDM 393
G V PN + + G+ +M + PD T MI + +++
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ +M ++ P+L T++ L++G + + + +L +I GI P ++T
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 143/311 (45%), Gaps = 4/311 (1%)
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLK 202
+A + +Y MD ++ N ++ + + K ++ M + P+L
Sbjct: 736 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 795
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+ILL G+ K ++ + +R ++ G PD ++ +V +C++ ++ ++++K
Sbjct: 796 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 855
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
+ +++L+ I A D M GI D +A++ + ++F
Sbjct: 856 ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRF 915
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI--KICEPDADTYTM 380
+ R VL EM G++P SR +I+ L G AF V MI KIC P+ +
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV-AESA 974
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
M++ + + D A + + M + VP++ +F+ L++ C+NGN ++A L M G
Sbjct: 975 MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG 1034
Query: 441 IRPSRVTFGKL 451
++ V++ L
Sbjct: 1035 LKLDLVSYNVL 1045
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 169/380 (44%), Gaps = 22/380 (5%)
Query: 82 FRFFEWA------ERQRNYAHT--VRAYHLMIESLARIRQYQIMWDIVTKMRNK-GMLNV 132
F+ +W E+ N HT + + MI+ +R+ + + D++ +M N+ G N+
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 794
Query: 133 ETFCIVMRKYARAHKVDEAVYTF-NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
T+ I++ Y++ V + + +++ +P L + L+ +C+S + +I
Sbjct: 795 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC-HSLVLGICESNMLEIGLKILK 853
Query: 192 SMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
+ R E D T+++L+ + + A + + M S G S D + MV +L +
Sbjct: 854 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 913
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL---EMERKGIKADVV 307
R E+ V+ +M P S Y L++ R+ D AF+ EM I V
Sbjct: 914 RFQESRMVLHEMSKQGISPESRKYIGLINGL---CRVGDIKTAFVVKEEMIAHKICPPNV 970
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+A++ A K K +L+ M + P + ++ G A E+ R +
Sbjct: 971 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL-RVV 1029
Query: 368 IKICEPDAD--TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
+ C D +Y ++I C + +M +A +++++MK F+ + T+ ALI GL
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1089
Query: 426 AMKAC-VLLEEMIEKGIRPS 444
A ++L++++ +G S
Sbjct: 1090 AFSGADIILKDLLARGFITS 1109
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 5/273 (1%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
TF +++ K +++ A VM + + + ++S L ++ ++++ + M
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 194 -KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
K P+ + Y L+ G + ++ A EM++ P V+ MV L K G+
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
DEA +++ M +PT ++ L+H + +A++ + M G+K D+V YN L
Sbjct: 986 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE 372
I C + +EM+ +G N+ T +I L+++ + AF ++K
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR---ETAFSGADIILKDLL 1102
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+M + RN + MAM+ K ++S +
Sbjct: 1103 ARGFITSMSLSQDSHRN-LKMAMEKLKALQSNK 1134
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 194/425 (45%), Gaps = 22/425 (5%)
Query: 54 ALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQ 113
AL+ + S EL+ ++L+R + F A +Q+ + +AY M+ L+R R
Sbjct: 60 ALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARN 119
Query: 114 YQ-----------------IMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFN 156
YQ ++W + ++ + + F ++++ YA V A++ F+
Sbjct: 120 YQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 179
Query: 157 VMDKY-EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKD 214
M Y +P L+ + L + + K N A ++D M PD+ T SI++ + +
Sbjct: 180 NMGNYGRIPSLLSCNSLLSNLVRKGENF-VALHVYDQMISFEVSPDVFTCSIVVNAYCRS 238
Query: 215 PNLPKARETFREMVSA-GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
N+ KA +E S+ G +VV+Y +++ G V+ V++ M +
Sbjct: 239 GNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVT 298
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y+ L+ Y + +E+A F ++ K + AD +Y L+ +C+ + ++ RV M
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI 358
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMD 392
GV N+ CN +I+ G+ A ++F RM +PD TY ++ +C +D
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
A+K+ M K VP++ T++ L+ G + G L + M+++G+ ++ L
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 453 QLLIK 457
+ L K
Sbjct: 479 EALFK 483
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 177/377 (46%), Gaps = 9/377 (2%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVM 139
A F + E V Y+ +I A I + M ++ M +G+ NV T+ ++
Sbjct: 244 AMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLI 303
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEP 199
+ Y + ++EA + F ++ + ++ + + L+ C++ +R A + D+M E
Sbjct: 304 KGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM---IEI 360
Query: 200 DLKTYSI----LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
++T + L+ G+ K L +A + F M PD +Y +VD C+AG VDEA
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
+++ M +PT Y++L+ Y D + + M ++G+ AD + + L+ A
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPD 374
K F ++ + + + G+ ++ T NV+IS L + + A E+ + I C+P
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA 540
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
TY + + + + A + + M+ K P++ ++ LI+G + + K L+
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 435 EMIEKGIRPSRVTFGKL 451
E+ +G+ P+ T+G L
Sbjct: 601 ELRARGLTPTVATYGAL 617
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 152/322 (47%), Gaps = 18/322 (5%)
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
V+T+ + Y + + EA M++ + + +N L+S K R++ K ++
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 192 SMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
++ R P + TY L+ GW + KA T EM+ G + +V + + L +
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 251 RVDEAVEVVKDMDDNNCMPTSF---------IYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++DEA +++ + D + + + + + T + +E++ +K
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENST------PKKL 714
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEM-ESNGVTPNSRTCNVIISSLISQGRTDRA 360
+ + +VYN I CKA K ++ R++ ++ S+ P+ T ++I G ++A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 361 FEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
F + M +K P+ TY +IK C+ +D A ++ + K P+ T++ LI+G
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 420 LCQNGNAMKACVLLEEMIEKGI 441
L ++GN +A L E+MIEKG+
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGL 856
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 180/409 (44%), Gaps = 42/409 (10%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFC-IVMRKYARAHKVD 149
Q+ TV Y+++++ +RI + + + M +G+ E C ++ + +
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILL 208
EA+ + + + + N ++S LCK V +A+EI D++ R +P ++TY L
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G+ K NL +A M G P + Y ++ K +++ ++V ++
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
PT Y L+ + I+ A EM KGI +V + + + + + +K +
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 329 LKE-----------------MESNGVT---------------------PNSRTCNVIISS 350
L++ +E++ T PN+ NV I+
Sbjct: 669 LQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAG 728
Query: 351 LISQGRTDRAFEVFRRMIKICE--PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
L G+ + A ++F ++ PD TYT++I +++ A + +M K +P
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP 788
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
++ T++ALI GLC+ GN +A LL ++ +KGI P+ +T+ L L+K
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 200/471 (42%), Gaps = 53/471 (11%)
Query: 35 LTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAG--MSAFRFF----EWA 88
L + C+ V + + + GVR + + +++ + +G + A + F +W+
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 89 ERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHK 147
+ + HT Y+ +++ R + +M K ++ V T+ I+++ Y+R
Sbjct: 397 LKPDH--HT---YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSI 206
+ + + +M K V + + + LL AL K + +A ++++++ R D T ++
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
++ G K + +A+E + C P V +Y + K G + EA V + M+
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
PT +Y+ L+ + D +E+ +G+ V Y ALI +C
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI------------------ 368
EM G+T N C+ I +SL + D A + ++++
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 369 ---------KICE------------PDADTYTMMIKMFCERNEMDMAMKIWKD-MKSKRF 406
KI E P+ Y + I C+ +++ A K++ D + S RF
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 407 VPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
+P +T++ LI+G G+ KA L +EM KGI P+ VT+ L + L K
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCK 802
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 137/300 (45%), Gaps = 17/300 (5%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVM 139
AF E+ ER+ + T+ Y+ +I + R + D+V ++R +G+ V T+ ++
Sbjct: 560 AFAVKEYMERKGIFP-TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI 618
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA----QEIFDSMKG 195
+ +D+A T M + + N+ + + ++L + + +A Q+I D
Sbjct: 619 TGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD---- 674
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS-----PDVVSYGIMVDILCKAG 250
F+ L Y L E + E V P+ + Y + + LCKAG
Sbjct: 675 -FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAG 733
Query: 251 RVDEAVEVVKDM-DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
++++A ++ D+ + +P + Y++L+H + I A EM KGI ++V Y
Sbjct: 734 KLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTY 793
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
NALI CK +R+L ++ G+TPN+ T N +I L+ G A + +MI+
Sbjct: 794 NALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 39/200 (19%)
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDL 201
+ K+ E+V + K VP N+ +N ++ LCK+ + A+++F + RF PD
Sbjct: 698 KTQKIAESVEN-STPKKLLVPNNIV-YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDE 755
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
TY+IL+ G ++ KA EM G P++V+Y ++ LCK G VD A
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR---- 811
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
L+H ++ +KGI + + YN LI K+
Sbjct: 812 ---------------LLH----------------KLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 322 FKNVRRVLKEMESNGVTPNS 341
R+ ++M G+ S
Sbjct: 841 VAEAMRLKEKMIEKGLVRGS 860
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 159/338 (47%), Gaps = 38/338 (11%)
Query: 153 YTFNVMDKYEVPQNLAAFNGLLSALCKSRN-VRKAQEIFDSM-KGRFEPDLKTYSILLEG 210
+ F + E P + + L ++LC ++ + KAQ++ D M K EP+ Y L+
Sbjct: 550 HAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGA 609
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
W + N+ KARE F +V+ PD+ +Y IM++ C+ +A + +DM + P
Sbjct: 610 WCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPD 669
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
YSVL+++ + +D EME + DVV Y +I +C N K V + K
Sbjct: 670 VVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFK 722
Query: 331 EMESNGVTPNSRTCNVIISSLISQ--GRTDRAFEV------------------------- 363
+M+ + P+ T V++ + + R +AF+V
Sbjct: 723 DMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKR 782
Query: 364 -FRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
F +MI+ +PDA YT +I C+ + A I+ M P + ++ALI G C
Sbjct: 783 IFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCC 842
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
+NG +KA L++EM+EKGI+P++ + + +K K
Sbjct: 843 RNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAK 880
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 167/360 (46%), Gaps = 17/360 (4%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARA----HKVDEAVYTF 155
Y IE L + I + ++ +R+ +L + I RK R ++++A
Sbjct: 255 YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVV 314
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M+K+ + ++ ++ ++ K+ N+ KA ++F+ M K R + S +L+ + +
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
N +A + F+E S D V Y + D L K G+V+EA+E+ ++M P Y
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINY 434
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L+ ++ + DA D +EM+ G D+V+YN L G + LK ME+
Sbjct: 435 TTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI--KICEPDADTYTMMIKMFCERNEMD 392
GV P T N++I LI G D+A E F + K E DA M+K FC +D
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKA-EAFYESLEHKSRENDAS----MVKGFCAAGCLD 549
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM-KACVLLEEMIEKGIRPSRVTFGKL 451
A + + ++ F + L LC + + KA LL+ M + G+ P + +GKL
Sbjct: 550 HAFERFIRLE---FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKL 606
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
++Y +V LC R+++A VV DM+ + P ++YS ++ + I A+D F +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M +K + + V+ ++++ +C+ F + KE ++ + NV +L G+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 357 TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
+ A E+FR M K PD YT +I C + + A + +M P + ++
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
L GL NG A +A L+ M +G++P+ VT + + LI D +E +
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y +MI + R+ + + + + M+ + + +V T+ +++ D + M
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREM 689
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ ++V ++ + +++ C +++K +F MK R PD+ TY++LL+ N
Sbjct: 690 EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK------NK 743
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
P+ R REM + PDV Y +++D CK G + EA + M ++ P + Y+ L
Sbjct: 744 PE-RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ +++A F M G+K DVV Y ALI C+ +++KEM G+
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Query: 338 TPNSRTCNVI 347
P + + +
Sbjct: 863 KPTKASLSAV 872
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 189/414 (45%), Gaps = 40/414 (9%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFN 156
+V H +I+ + ++++ + + G+ NV ++ + K DEA +
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLS 467
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKD 214
M+ + N+ ++N ++ C+ +N+ A+ +F ++ KG +P+ TYSIL++G ++
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG-LKPNNYTYSILIDGCFRN 526
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR----------------------- 251
+ A E M S+ + V Y +++ LCK G+
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 252 -------------VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
+D AV ++M N P Y+ L++ NR++ A++ EM+
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
KG+K D+ Y ALI FCK + ++ + E+ G+ P+ N +IS + G
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 359 RAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
A +++++M+K D TYT +I + + +A +++ +M++ VP ++ ++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
NGL + G +K + EEM + + P+ + + + +E D LH+++
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 171/361 (47%), Gaps = 4/361 (1%)
Query: 92 RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDE 150
R V +Y+ ++ R + + + + + KG+ N T+ I++ R H
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILL 208
A+ N M + N + +++ LCK KA+E+ +M + R +Y+ ++
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+G+ K+ + A + EM G SP+V++Y +++ LCK R+D+A+E+ +M +
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
Y L+ + + +E A F E+ +G+ +YN+LI F +
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE 387
K+M +G+ + T +I L+ G A E++ M + PD YT+++ +
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ + +K++++MK P++ ++A+I G + GN +A L +EM++KGI P T
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Query: 448 F 448
F
Sbjct: 832 F 832
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 176/425 (41%), Gaps = 74/425 (17%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGML--NVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y L +++ + + ++ +M+ K + + ET+ V+ + +D+A+ + M
Sbjct: 271 YSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEM 330
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNL 217
+ N+ A L++ CK+ ++ A +FD M K P+ T+S+L+E + K+ +
Sbjct: 331 LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEM 390
Query: 218 PKARETFREMVSAGCSPDVVSYGIMV---------------------------------- 243
KA E +++M G +P V ++
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTIL 450
Query: 244 DILCKAGRVDEAVEVVKDMDD----------NNCM------------------------- 268
LCK G+ DEA E++ M+ NN M
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P ++ YS+L+ + ++A++ M I+ + VVY +I CK + R +
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 329 LKEM-ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFC 386
L M E + + + N II +G D A + M P+ TYT ++ C
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+ N MD A+++ +MK+K + + ALI+G C+ N A L E++E+G+ PS+
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 447 TFGKL 451
+ L
Sbjct: 691 IYNSL 695
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 190/431 (44%), Gaps = 27/431 (6%)
Query: 67 VENVLKRFENAGMSAFRFFEWAERQRN----------YAHTV--------RAYHLMIESL 108
V +VL N +A RF+ WA R H + RA L+I +
Sbjct: 75 VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYV 134
Query: 109 ARIRQYQIMWDIVTKMRNKGM-----LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEV 163
+ + +V+K+ + +N F ++ Y++ + D AV N M + +V
Sbjct: 135 STSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDV 194
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARE 222
N LSAL + ++ +A+E++ M + D T +L+ ++ +A E
Sbjct: 195 IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALE 254
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN-CMPTSFIYSVLVHTY 281
+ G PD + Y + V CK + A ++++M + C+P+ Y+ ++
Sbjct: 255 VLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILAS 314
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
+ ++DAI EM GI +VV +LI CK N + + +ME G +PNS
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNS 374
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T +V+I G ++A E +++M + P +I+ + + + + A+K++ D
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF-D 433
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+ + ++ + +++ LC+ G +A LL +M +GI P+ V++ + ++K
Sbjct: 434 ESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 461 EDVLTFLHEKI 471
D+ + I
Sbjct: 494 MDLARIVFSNI 504
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 4/286 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE--TFCIVMRKYARAHKVDEAVYTFNVM 158
Y +I L ++ Q +++ M + L V ++ ++ + + ++D AV + M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNL 217
+ N+ + L++ LCK+ + +A E+ D MK + + D+ Y L++G+ K N+
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
A F E++ G +P Y ++ G + A+++ K M + Y+ L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ + + A + + EM+ G+ D ++Y ++ K +F V ++ +EM+ N V
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMI 382
TPN N +I+ +G D AF + M+ K PD T+ +++
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV T+ +M + +++D+A+ + M V ++ A+ L+ CK N+ A +F
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 191 DSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+ + P Y+ L+ G+ N+ A + +++M+ G D+ +Y ++D L K
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G + A E+ +M +P IY+V+V+ + + + F EM++ + +V++Y
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
NA+I + R+ EM G+ P+ T ++++S + + RA
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRA 848
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY-----SVLVHTYGVENRIEDAID 292
++ +++ K + D AV++V M + + +P F Y S LV N + +A +
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPF-FPYVNRTLSALVQ----RNSLTEAKE 219
Query: 293 AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLI 352
+ M G+ D V L+ A + K VL G P+S ++ + +
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 353 SQGRTDRAFEVFRRMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL 410
A + R M K+C P +TYT +I ++ MD A+++ +M S ++
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEK 470
++LI G C+N + + A VL ++M ++G P+ VTF L + K + ++K
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 471 INLLVKEP 478
+ +L P
Sbjct: 400 MEVLGLTP 407
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 162/372 (43%), Gaps = 44/372 (11%)
Query: 120 IVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
+V +MR G N ++ +++ + VD+A+Y FN M+KY + N N ++ ALC
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 179 K-----SRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
+ + N + +EI DS + D+ +IL++ K+ N+ +A E ++EM
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
D V Y +++ LC +G + A + DM P F Y+ L+ E + ++A D
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 294 FLEMERKGIKADVVVYNALIGAFC------KANKF------------------------- 322
M+ G+ D + Y +I C +AN+F
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 323 ----KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPDAD 376
+ VL M S GV PN T N +I + GR A+ V M KI PD
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI-HPDTT 476
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
TY +++ C + +A +++ +M + P + T++ L+ GLC G KA LL +
Sbjct: 477 TYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Query: 437 IEKGIRPSRVTF 448
GI V F
Sbjct: 537 QATGITIDHVPF 548
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 115 QIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLL 174
+++ +I+ + L++ I+M + V +A+ + M + VP + +N ++
Sbjct: 248 KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Query: 175 SALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
LC S N+ A D +K PD+ TY+ L+ K+ +A + M + G +
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
PD +SY +++ LC G V+ A E + M ++ +P +++V++ YG A+
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
M G+K +V NALI + K + + V EM S + P++ T N+++ + +
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACT 487
Query: 354 QGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMA 394
G AF+++ M+ + C+PD TYT +++ C + + A
Sbjct: 488 LGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA 529
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 150/329 (45%), Gaps = 6/329 (1%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF 197
+MR K+D A++ M V L N LL+ LCK+ + KA + M+
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 198 -EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD--- 253
P+ +Y+ L++G N+ KA F M G P+ V+ I+V LC+ G +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 254 -EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
+ +E + D N I ++L+ + + A++ + EM +K + AD VVYN +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-C 371
I C + + +M GV P+ T N +IS+L +G+ D A ++ M
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACV 431
PD +Y ++I+ C +++ A + M +P + ++ +I+G + G+ A
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 432 LLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+L M+ G++P+ T L +K R
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGR 455
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 18/306 (5%)
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKD 214
FNV+D Y + +L L ++C++++ FD ++ L +S ++
Sbjct: 88 FNVLD-YILKSSLDRLASLRESVCQTKS-------FD-----YDDCLSIHSSIMRDLCLQ 134
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
L A ++M+ +G P ++++ +++ LCKAG +++A +V++M + P Y
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+ L+ N ++ A+ F M + GI+ + V N ++ A C+ N + L E
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 335 NGVTPNSR----TCNVIISSLISQGRTDRAFEVFRRMIKICEP-DADTYTMMIKMFCERN 389
+ N+ C +++ S G +A EV++ M + P D+ Y ++I+ C
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG 449
M A DM + P + T++ LI+ LC+ G +AC L M G+ P ++++
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 450 KLRQLL 455
+ Q L
Sbjct: 375 VIIQGL 380
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 6/233 (2%)
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
IM D LC G++D A+ + K M + +P ++ L++ IE A EM
Sbjct: 127 IMRD-LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREM 185
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG----R 356
G + V YN LI C N + M G+ PN TCN+I+ +L +G
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 357 TDRAFEVFRRMIKICEP-DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
+ E + P D T+++ + + A+++WK+M K ++
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNV 305
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLH 468
+I GLC +GN + A + +M+++G+ P T+ L L KE + D LH
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 124/288 (43%), Gaps = 9/288 (3%)
Query: 87 WAE-RQRNYAHTVRAYHLMIESLAR----IRQYQIMWDIVTKMRNKGMLNVETFCIVMRK 141
W E Q+N Y+++I L + Y M D+V + N +V T+ ++
Sbjct: 288 WKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP---DVFTYNTLISA 344
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE-PD 200
+ K DEA M V + ++ ++ LC +V +A E SM P+
Sbjct: 345 LCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPE 404
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
+ ++++++G+G+ + A M+S G P+V + ++ K GR+ +A V
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN 464
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
+M P + Y++L+ + A + EM R+G + D++ Y L+ C
Sbjct: 465 EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
+ K +L +++ G+T + ++ R A+ V+++ +
Sbjct: 525 RLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 173/359 (48%), Gaps = 3/359 (0%)
Query: 93 NYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEA 151
+ TV Y +I ++ + ++ M+ +G+ N++T+ +++ + + A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 152 VYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA-QEIFDSMKGRFEPDLKTYSILLEG 210
F M K + ++ +N ++SA C N+ +A Q + + K R P +T+ ++ G
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+ K ++ ++ E F M GC P V ++ +++ L + ++++AVE++ +M
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
Y+ ++ Y A + F ++ +G+ D+ Y AL+ A CK+ + ++ V K
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERN 389
EM + + NS N++I +G A ++ ++M K +PD TYT I +
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+M+ A + ++M++ P++ T++ LI G + KA EEM GI+P + +
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 201/459 (43%), Gaps = 17/459 (3%)
Query: 1 MIKICNPRKKLLCKFVSFARMLSTGEPPPQEVADLTETVCKVMMSSPGVTLDAALN---- 56
M+K R + +F RM + G P + + + G +D AL+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRI-----YTSLIHAYAVGRDMDEALSCVRK 369
Query: 57 --QTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRA--YHLMIESLARIR 112
+ G+ S ++ F AG + + W + + T+ A Y +I + +
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADY-WFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 113 QYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFN 171
+ +V +M +G+ + + +M Y + + F + + + +
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 172 GLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
L++ K + KA E+ MK + +LKTYS+++ G+ K + A F +MV
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G PDV+ Y ++ C G +D A++ VK+M PT+ + ++H Y + +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
++ F M R G V +N LI + + + +L EM GV+ N T I+
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 351 LISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
S G T +AFE F R+ + + D TY ++K C+ M A+ + K+M ++ +
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
++ LI+G + G+ +A L+++M ++G++P T+
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 139/297 (46%), Gaps = 8/297 (2%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
TF ++ YA++ + ++ F++M + + FNGL++ L + R + KA EI D M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 194 K-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
+ TY+ +++G+ + KA E F + + G D+ +Y ++ CK+GR+
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
A+ V K+M N SF+Y++L+ + + +A D +M+++G+K D+ Y +
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-C 371
I A KA + ++EME+ GV PN +T +I ++A + M +
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 372 EPDADTYTMMIKMFCERNEMDMA------MKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+PD Y ++ R + A M I K+M + + T LC+
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCK 887
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 159/357 (44%), Gaps = 5/357 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMD 159
+ LM++ R + +MR +G+ + ++ YA +DEA+ M
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKT--YSILLEGWGKDPNL 217
+ + +L ++ ++ K+ + A FD K R L Y ++ + N+
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK-RIHKTLNASIYGKIIYAHCQTCNM 430
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A REM G + Y M+D + + V K + + PT Y L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
++ Y +I A++ M+ +G+K ++ Y+ +I F K + N V ++M G+
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ N IIS+ G DRA + + M K+ P T+ +I + + +M +++
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
++ M+ VP++HTF+ LINGL + KA +L+EM G+ + T+ K+ Q
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 3/329 (0%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK 194
F ++++ Y R + A TF M + + L+ A R++ +A MK
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 195 GR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
E L TYS+++ G+ K + A F E + + YG ++ C+ ++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
A +V++M++ IY ++ Y + + + F ++ G VV Y LI
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICE 372
+ K K V + M+ GV N +T +++I+ + AF VF M+K +
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVL 432
PD Y +I FC MD A++ K+M+ R P+ TF +I+G ++G+ ++ +
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 433 LEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
+ M G P+ TF L L+ EKR+
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLV-EKRQ 639
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 187 QEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDIL 246
Q + + + +P + ++++ +G+ ++ +ARETF M + G +P Y ++
Sbjct: 295 QAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY 354
Query: 247 CKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
+DEA+ V+ M + + YSV+V + E A F E +R +
Sbjct: 355 AVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA 414
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
+Y +I A C+ + +++EME G+ + ++ + VF+R
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 367 MIKIC--EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
+ K C P TY +I ++ + ++ A+++ + MK + +L T+S +ING +
Sbjct: 475 L-KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ A + E+M+++G++P + + +
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNI 560
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 192/449 (42%), Gaps = 40/449 (8%)
Query: 61 RASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDI 120
R +P +V VLK +A ++A +FF WA +Q+ Y H AY+ L R ++ +
Sbjct: 122 RVTPSIVAEVLKLGNDAAVAA-KFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL 180
Query: 121 VTKMRNKGMLNVE-TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK 179
M ++G E F I++R +A + Y + M K+ + +N ++ AL K
Sbjct: 181 PELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVK 240
Query: 180 SRNVRKAQEIFDSMK---------------------GRFE---------------PDLKT 203
+ A +++ K GR E PD+
Sbjct: 241 NGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFA 300
Query: 204 YSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD 263
Y+ +++ + NL + + EM PDV++YG +V LCK GRV+ E+ +M
Sbjct: 301 YTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMK 360
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
+ IY VL+ + + ++ A + + ++ G AD+ +YNA+I C N+
Sbjct: 361 GKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD 420
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIK 383
++ + + P+ T + I+ + + R V R+ ++ P +D T K
Sbjct: 421 KAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFK 480
Query: 384 MFCERNEMD-MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
+ C E + MA+ ++ +K+K S+ ++ L+ L + G+ K+ L EM + G
Sbjct: 481 LLCADEEKNAMALDVFYILKTKGH-GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFE 539
Query: 443 PSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
P ++ +++ HEKI
Sbjct: 540 PDSSSYSIAICCFVEKGDVKAACSFHEKI 568
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 170/387 (43%), Gaps = 40/387 (10%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMR-NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
+ ++++ L + + + M +I+ +MR N +V + +++ +D ++ ++ M
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR 325
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLP 218
+ E+ ++ A+ L+ LCK V + E+F MKG+ D + Y +L+EG+ D +
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVR 385
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
A + ++V +G D+ Y ++ LC +VD+A ++ + + P S ++
Sbjct: 386 SACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
Query: 279 HTYGVENRIED-----------------------------------AIDAFLEMERKGIK 303
Y V NR+ D A+D F ++ KG
Sbjct: 446 VAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-H 504
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
V VYN L+ A K + + EM G P+S + ++ I + +G A
Sbjct: 505 GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSF 564
Query: 364 FRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD-MKSKRFVPSLHTFSALINGLC 421
++I++ C P Y + K C+ E+D M + ++ + + P ++ + +C
Sbjct: 565 HEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVC 624
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ NA K +++EM ++G+ + V +
Sbjct: 625 KGSNAEKVMKVVDEMNQEGVFINEVIY 651
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 134/318 (42%), Gaps = 25/318 (7%)
Query: 93 NYAHTVRAYHLMIESLARIRQYQIMWDIV-TKMRNKGMLNVETFCIVMRKYARAHKVDEA 151
Y + Y+ +I+ L + Q + + + + + ET +M Y +++ +
Sbjct: 398 GYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDF 457
Query: 152 VYTFNVMDK-----YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSI 206
NV+++ Y V L F LL A + +N A ++F +K + + Y+I
Sbjct: 458 S---NVLERIGELGYPVSDYLTQFFKLLCA-DEEKNAM-ALDVFYILKTKGHGSVSVYNI 512
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
L+E K ++ K+ F EM G PD SY I + + G V A + + + +
Sbjct: 513 LMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMS 572
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV------VVYNALIGAFCKAN 320
C+P+ I + L T G+ E IDA + + R+ + +V Y + CK +
Sbjct: 573 CVPS--IAAYLSLTKGLCQIGE--IDAVMLLVRECL-GNVESGPMEFKYALTVCHVCKGS 627
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK---ICEPDADT 377
+ V +V+ EM GV N IIS + G A EVF + K + E D
Sbjct: 628 NAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVV 687
Query: 378 YTMMIKMFCERNEMDMAM 395
Y M+ ++ D+ +
Sbjct: 688 YEEMLIEQTKKKTADLVL 705
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 173/386 (44%), Gaps = 16/386 (4%)
Query: 69 NVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKG 128
++L R G + FF +R R V +Y ++I L R + +I M G
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGRE--PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
Query: 129 MLNVETFCIVMR-KYARAHKVDEAV-YTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
+ C + A KVD A + V + +N L+S CK+ + KA
Sbjct: 180 VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 187 QEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
+ + M K EPDL TY++LL + + L +A EMV +G D SY ++
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
Query: 246 LCKAGRVDEAVE-VVKDMDDNNCMPTSFI----YSVLVHTYGVENRIEDAIDAFLEMERK 300
C+ D+ +VK+M+ P F YS L+ T+ + A F EM +K
Sbjct: 300 HCRVSHPDKCYNFMVKEME-----PRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK 354
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
G+ +VV Y +LI AF + +++L +M G++P+ I+ L G D+A
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 361 FEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
+ VF MI+ PDA +Y +I C + A+K+++DMK K P TF +I G
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSR 445
L + A + ++M++KG R
Sbjct: 475 LIRGKKLSAAYKVWDQMMDKGFTLDR 500
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 184/413 (44%), Gaps = 39/413 (9%)
Query: 87 WAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARA 145
W + ++ Y I L +++++ ++ +++ M G + ++ F + + R
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 146 HKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTY 204
+KV AV TF M + ++ ++ L++ L ++ V A EI+++M + PD K
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 205 SILLEGWGKDPNLPKARETFREMV-SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD 263
+ L+ G + A E E + SA V Y ++ CKAGR+++A + M
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK-------------------- 303
C P Y+VL++ Y N ++ A EM R GI+
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 304 ---------------ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
DVV Y+ LI FC+A+ + R+ +EM G+ N T +I
Sbjct: 308 KCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 349 SSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
+ + +G + A ++ +M ++ PD YT ++ C+ +D A ++ DM
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
P ++++LI+GLC++G +A L E+M K P +TF + LI+ K+
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 189/405 (46%), Gaps = 24/405 (5%)
Query: 66 LVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMR 125
+++N ++ F+ S++R F + Y+ I L R ++++ I M+
Sbjct: 24 MIDNAVQVFDEMRHSSYRVFSFD------------YNRFIGVLVRESRFELAEAIYWDMK 71
Query: 126 NKGMLNVE-TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
G + T+ + + K D + M+ ++ AFN L LC+ V
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 185 KAQEIFDSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
A + F M +GR EPD+ +Y+IL+ G + + A E + M+ +G SPD + +
Sbjct: 132 FAVQTFFCMVQRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 243 VDILCKAGRVDEAVEVV-KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
V LC A +VD A E+V +++ ++ +Y+ L+ + RIE A M + G
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
+ D+V YN L+ + N K V+ EM +G+ ++ + N ++ D+ +
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCY 310
Query: 362 EVFRRMIKICEP----DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
M+K EP D +Y+ +I+ FC + A +++++M+ K V ++ T+++LI
Sbjct: 311 NF---MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+ GN+ A LL++M E G+ P R+ + + L K D
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 5/313 (1%)
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
++ +S LCK + + M+ F PD+ +++ L+ ++ + A +TF MV
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
G PDVVSY I+++ L +AG+V +AVE+ M + P + + LV +++
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 289 DAIDAFLE-MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
A + E ++ +K VVYNALI FCKA + + + M G P+ T NV+
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 348 ISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIW-KDMKSKR 405
++ RA V M++ + DA +Y ++K C + D K+M+ +
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG 321
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLT 465
F + ++S LI C+ N KA L EEM +KG+ + VT+ L + ++E V
Sbjct: 322 FCDVV-SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 466 FLHEKINLLVKEP 478
L +++ L P
Sbjct: 381 KLLDQMTELGLSP 393
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 116/231 (50%), Gaps = 7/231 (3%)
Query: 124 MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQ---NLAAFNGLLSALCKS 180
+R+ L+ ++ +++++ R D+ +N M K P+ ++ +++ L+ C++
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKC---YNFMVKEMEPRGFCDVVSYSTLIETFCRA 338
Query: 181 RNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSY 239
N RKA +F+ M+ + ++ TY+ L++ + ++ N A++ +M G SPD + Y
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
++D LCK+G VD+A V DM ++ P + Y+ L+ R+ +AI F +M+
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
K D + + +IG + K +V +M G T + + +I +
Sbjct: 459 KECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 9/289 (3%)
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGR----FEPDLKTYSILLEGWGKDPNLPKARETF 224
A+ ++ L KS + A ++FD M+ F D + +L ++ A +
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLV---RESRFELAEAIY 67
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
+M G S +Y + LCK + D ++ DM+ +P + ++V + E
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
N++ A+ F M ++G + DVV Y LI +A K + + M +GV+P+++ C
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKICEPDADT--YTMMIKMFCERNEMDMAMKIWKDMK 402
++ L + D A+E+ IK T Y +I FC+ ++ A + M
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
P L T++ L+N N +A ++ EM+ GI+ ++ +L
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 172/366 (46%), Gaps = 10/366 (2%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGMLNVE----TFCIVMRKYARAHKVDEAVYTFNVMD 159
++ ++A++ +Y+ +++ R+ ML + +F ++ + R ++ A+ M
Sbjct: 85 LLIAIAKLNKYE---AVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLP 218
K ++ F L++ C +A + D + G +EP++ Y+ +++ + +
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
A + + M G PDVV+Y ++ L +G + ++ DM P +S L+
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
YG E ++ +A + EM ++ + ++V YN+LI C ++VL + S G
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKI 397
PN+ T N +I+ R D ++ M + + D TY + + +C+ + A K+
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
M S P ++TF+ L++GLC +G KA V LE++ + +T+ + + L K
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 458 -EKRED 462
+K ED
Sbjct: 442 ADKVED 447
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 143/292 (48%), Gaps = 2/292 (0%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV + ++ +V+ A+ M K + ++ +N L++ L S + I
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 191 -DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
D M+ PD+ T+S L++ +GK+ L +A++ + EM+ +P++V+Y +++ LC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G +DEA +V+ + P + Y+ L++ Y R++D + M R G+ D Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
N L +C+A KF +VL M S GV P+ T N+++ L G+ +A + K
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 370 I-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
TY ++IK C+ ++++ A ++ + K P + T+ ++ GL
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 1/265 (0%)
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P + +S LL K FR + G S D+ S+ ++D C+ R+ A+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+ M P+ + LV+ + NR +A+ ++ G + +VV+YN +I + C+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADT 377
+ VLK M+ G+ P+ T N +I+ L G + + M+++ PD T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
++ +I ++ + ++ A K + +M + P++ T+++LINGLC +G +A +L ++
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 438 EKGIRPSRVTFGKLRQLLIKEKRED 462
KG P+ VT+ L K KR D
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVD 341
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 220 ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
A F +M + P +V + ++ + K + + + + + ++ + ++ L+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 280 TYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP 339
+ R+ A+ +M + G + +V + +L+ FC N+F ++ ++ G P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIW 398
N N II SL +G+ + A +V + M K+ PD TY +I ++ +I
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
DM P + TFSALI+ + G ++A EMI++ + P+ VT+ L
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+ DA+ F +M +V ++ L+ A K NK++ V + + +E G++ + +
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 346 VIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
+I R A +M+K+ EP T+ ++ FC N AM + +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ P++ ++ +I+ LC+ G A +L+ M + GIRP VT+ L
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 190/400 (47%), Gaps = 38/400 (9%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQY-QIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKV 148
R+ + + AY++++++LA+ + Q+ D+ + + + T+ I++R R K
Sbjct: 230 RRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRR---DEYTYTIMIRTMGRIGKC 286
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSIL 207
DEAV FN M + N+ +N L+ L K + V KA ++F M + P+ TYS+L
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 208 L-----EG---------------------------WGKDPNLPKARETFREMVSAGCSPD 235
L EG K ++ +A F +M S +
Sbjct: 347 LNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL 295
SY M++ LC AG+ EA+E++ + + + + +Y+ + G +I D F
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 296 EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
+M++ G D+ YN LI +F + + + +E+E + P+ + N +I+ L G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 356 RTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFS 414
D A F+ M K PD TY+ +++ F + ++MA ++++M K P++ T++
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 415 ALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
L++ L +NG +A L +M ++G+ P +T+ L +L
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 190/420 (45%), Gaps = 41/420 (9%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDE 150
+ N + +++I Q+ +V K K +N T+ +++ Y R+ +
Sbjct: 164 KSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLK--MNSFTYKCLLQAYLRSRDYSK 221
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLE 209
A + + + ++ A+N LL AL K KA ++F+ MK R D TY+I++
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLDALAKDE---KACQVFEDMKKRHCRRDEYTYTIMIR 278
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
G+ +A F EM++ G + +VV Y ++ +L K VD+A++V M + C P
Sbjct: 279 TMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRP 338
Query: 270 TSF--------------------------------IYSVLVHTYGVENRIEDAIDAFLEM 297
+ IYS LV T + +A F +M
Sbjct: 339 NEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDM 398
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
+K + Y +++ + C A K +L ++ GV ++ N + S+L +
Sbjct: 399 WSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQI 458
Query: 358 DRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
++F +M K PD TY ++I F E+D A+ I+++++ P + ++++L
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSL 518
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVK 476
IN L +NG+ +A V +EM EKG+ P VT+ L + K +R ++ L E+ +LVK
Sbjct: 519 INCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEE--MLVK 576
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 162/345 (46%), Gaps = 18/345 (5%)
Query: 44 MSSPGVTLDAALNQT--GVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAY 101
M + G+TL+ T V A ++V+ ++ F R E R Y +++
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFS-------RMVETGCRPNEYTYSLLLN 348
Query: 102 HLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
L+ E ++ + + +I + +G+ + ++R ++ V EA F M +
Sbjct: 349 LLVAE--GQLVRLDGVVEISKRYMTQGI-----YSYLVRTLSKLGHVSEAHRLFCDMWSF 401
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKA 220
V ++ +L +LC + +A E+ + + D Y+ + GK +
Sbjct: 402 PVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHI 461
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHT 280
+ F +M G SPD+ +Y I++ + G VDEA+ + ++++ ++C P Y+ L++
Sbjct: 462 HDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINC 521
Query: 281 YGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
G +++A F EM+ KG+ DVV Y+ L+ F K + + + +EM G PN
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKM 384
T N+++ L GRT A +++ +M + PD+ TYT++ ++
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 53/299 (17%)
Query: 216 NLP----KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
NLP + R MV + ++ + I++ + + +VK D S
Sbjct: 147 NLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWD---LKMNS 203
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK----FKNVRR 327
F Y L+ Y A D + E+ R G K D+ YN L+ A K K F+++++
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKK 263
Query: 328 ----------------------------VLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
+ EM + G+T N N ++ L D+
Sbjct: 264 RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDK 323
Query: 360 AFEVFRRMIKI-CEPDADTYTMMIKMFCERNE---MDMAMKIWKDMKSKRFVPSLHTFSA 415
A +VF RM++ C P+ TY++++ + + +D ++I SKR++ + +S
Sbjct: 324 AIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEI-----SKRYM-TQGIYSY 377
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE----DVLTFLHEK 470
L+ L + G+ +A L +M ++ R ++ + + L + ++L+ +HEK
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEK 436
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 175/367 (47%), Gaps = 14/367 (3%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
V Y I++ + + Q+ M+ + NV TF ++ Y +A ++ AV +
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDP 215
M + + N+ + L+ CK +++A+E++ M + R EP+ Y+ +++G+ +
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+ A + +M++ G D+ +YG+++ LC G++ EA E+V+DM+ ++ +P I++
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
+++ Y R++ A++ + ++ +G + DVV + +I K + ++N
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN 402
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE----PDADTYTMMIKMFCERNEM 391
V V+I +L +G EV R KI E PD YT I C++ +
Sbjct: 403 DVMYT-----VLIDALCKEGDF---IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A K+ M + + L ++ LI GL G ++A + +EM+ GI P F L
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 452 RQLLIKE 458
+ KE
Sbjct: 515 IRAYEKE 521
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 152/310 (49%), Gaps = 8/310 (2%)
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDSMKGRF--EPDLKTYSILLEGWGKDPNLPKAR---E 222
++FN ++S +CK V+ A++I SM RF EPD+ +Y+ L++G ++ ++ A E
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMP-RFGCEPDVISYNSLIDGHCRNGDIRSASLVLE 115
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
+ R C PD+VS+ + + K +DE V V + C P YS + T+
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
++ A+ +F M+R + +VV + LI +CKA + + KEM ++ N
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T +I +G RA E++ RM++ EP++ YT +I F +R + D AMK M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
++ + + +I+GLC NG +A ++E+M + + P V F + K R
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 462 DVLTFLHEKI 471
++ K+
Sbjct: 355 KAAVNMYHKL 364
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 165/376 (43%), Gaps = 45/376 (11%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNV 157
+R+ L++ESL + DIV+ F + +++ +DE V
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVS------------FNSLFNGFSKMKMLDEVFVYMGV 154
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPN 216
M K P N+ ++ + CKS ++ A + F SMK P++ T++ L++G+ K +
Sbjct: 155 MLKCCSP-NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGD 213
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L A ++EM S +VV+Y ++D CK G + A E+ M ++ P S +Y+
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
++ + ++A+ +M +G++ D+ Y +I C K K ++++ME +
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADT------------------ 377
+ P+ ++++ GR A ++ ++I + EPD
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Query: 378 ------------YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
YT++I C+ + +++ + VP +++ I GLC+ GN
Sbjct: 394 VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Query: 426 AMKACVLLEEMIEKGI 441
+ A L M+++G+
Sbjct: 454 LVDAFKLKTRMVQEGL 469
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
+VS G +P S+ +V +CK G+V A ++V M C P Y+ L+ +
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 287 IEDAIDAFLEMERKG----IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
I A LE R K D+V +N+L F K V + M +PN
Sbjct: 107 IRSA-SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVV 164
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T + I + G A + F M + P+ T+T +I +C+ ++++A+ ++K+M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
+ R ++ T++ALI+G C+ G +A + M+E + P+ + + + +
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 462 D-VLTFLHEKIN 472
D + FL + +N
Sbjct: 285 DNAMKFLAKMLN 296
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 15/264 (5%)
Query: 121 VTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK 179
+ KM N+GM L++ + +++ K+ EA M+K ++ ++ F +++A K
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 180 SRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC--SPDV 236
S ++ A ++ + R FEPD+ S +++G K+ L +A F C +
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-------CIEKAND 403
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
V Y +++D LCK G E + + + +P F+Y+ + + + DA
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M ++G+ D++ Y LI R+V EM ++G++P+S +++I + +G
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
Query: 357 ----TDRAFEVFRRMIKICEPDAD 376
+D ++ RR + DAD
Sbjct: 524 MAAASDLLLDMQRRGLVTAVSDAD 547
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 19/294 (6%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM----RNKGMLNVETFC 136
A FF W E + H M LA+ ++ +WD + ++ K ++ +
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-- 194
+M+ V EA+ TF M +Y ++ A+N +++ALC+ N +KA+ + D M+
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 195 -GRFEPDLKTYSILLEGWGK-----------DPNLPKARETFREMVSAGCSPDVVSYGIM 242
R+ PD TY+IL+ + + + +A FREM+ G PDVV+Y +
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
+D CK R+ A+E+ +DM C+P Y+ + Y V N IE AI+ M++ G
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH 349
Query: 303 KA-DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
Y LI A + + R ++ EM G+ P T ++ +L S+G
Sbjct: 350 GVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 17/259 (6%)
Query: 205 SILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD- 263
+ L++ G++ + +A TF M C PDV +Y +++ LC+ G +A ++ M
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 264 -DNNCMPTSFIYSVLVHTY-----------GVENRIEDAIDAFLEMERKGIKADVVVYNA 311
P ++ Y++L+ +Y + R+ +A F EM +G DVV YN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC 371
LI CK N+ + ++M++ G PN T N I + A E+ R M K+
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 372 E--PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
P + TYT +I E A + +M VP +T+ + + L G A
Sbjct: 349 HGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTL 408
Query: 430 CVLLEEMIEKGI--RPSRV 446
L + + +GI R SRV
Sbjct: 409 DEELHKRMREGIQQRYSRV 427
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G D +V + + N + T+ I + L+ G E +++A+ F M+ K DV Y
Sbjct: 145 GLWDFLRQVSRRENGKNVVTTASI-TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAY 203
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGV--TPNSRTCNVIISSLISQG-----------R 356
N +I A C+ FK R +L +M+ G P++ T ++ISS G R
Sbjct: 204 NTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRR 263
Query: 357 TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
A +FR M+ + PD TY +I C+ N + A+++++DMK+K VP+ T+++
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIR-PSRVTFGKLRQLLIKEKR 460
I A ++ M + G P T+ L L++ +R
Sbjct: 324 FIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRR 369
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 159/331 (48%), Gaps = 7/331 (2%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GR 196
++R AR ++D+A+ VM + +N ++ LCK ++R A + + M
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
PD+ TY+ ++ N +A +++ + GC P +++Y ++V+++C+ A+
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
EV++DM C P Y+ LV+ +E+ + G++ + V YN L+ +
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDA 375
C + V +L M P T N++I+ L RA + F +M+ + C PD
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
TY ++ + +D A+++ +K+ P L T++++I+GL + G KA L +
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 436 MIEKGIRPSRVT-----FGKLRQLLIKEKRE 461
M++ GI P +T +G R L++E +
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQ 475
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 81 AFRFFEWAERQRNYAHT-VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIV 138
A RF W ++ +N + Y +++E + R +++ M +G ++ T+ +
Sbjct: 228 AIRF--WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRF 197
+ R ++E + + + N +N LL +LC + +EI + M + +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
P + TY+IL+ G K L +A + F +M+ C PD+V+Y ++ + K G VD+A+E
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
++ + + C P Y+ ++ + ++ A++ + +M GI D + +LI FC
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFC 465
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDAD 376
+AN + +VLKE + G T ++I L + + A EV M+ C+PD
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET 525
Query: 377 TYTMMIK 383
YT ++K
Sbjct: 526 IYTAIVK 532
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 176/420 (41%), Gaps = 8/420 (1%)
Query: 44 MSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMS-AFRFFEWAERQRNYAHTVRAYH 102
M G++ D + + + E++ N+ N ++ A + E R H +
Sbjct: 88 MKQFGLSSDGPITENDEETNNEILHNLCS---NGKLTDACKLVEVMARHNQVPHFPSCSN 144
Query: 103 LMIESLARIRQY-QIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKY 161
L + LARI Q + M + + + G+ + T+ +++ + + A+ M
Sbjct: 145 L-VRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLS 203
Query: 162 EVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKA 220
P ++ +N ++ + N +A + D ++ P + TY++L+E + +A
Sbjct: 204 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARA 263
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHT 280
E +M GC PD+V+Y +V+ C+ G ++E V++ + + + Y+ L+H+
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Query: 281 YGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
++ + M + V+ YN LI CKA +M P+
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWK 399
T N ++ ++ +G D A E+ + C P TY +I ++ M A++++
Sbjct: 384 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYH 443
Query: 400 DMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
M P T +LI G C+ +A +L+E +G T+ + Q L K+K
Sbjct: 444 QMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKK 503
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 192/475 (40%), Gaps = 86/475 (18%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWA-ERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV 121
+P L+ +LK+ +N ++A + FE A ER +Y H Y MI+ L + + M ++
Sbjct: 11 TPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVI 69
Query: 122 TKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDK-------------------- 160
+M+ F V+R ++RA ++++A+ F + +
Sbjct: 70 ERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKE 129
Query: 161 ----------------YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLK 202
+EV + A N L+ LC+ A ++F M +G + PD
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY-PDRD 188
Query: 203 TYSILLEGWGKDPNLPKARE----TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
+Y IL++G+ + L +A F + G D+V Y I++D LC AG VD+A+E+
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 259 VKDMDDN-------------------------------------NCMPTSFIYSVLVHTY 281
+ + +P YS +
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL-KEMESNGVTPN 340
E ++ + + L M KG + +Y A + A C+A K K V+ KEM P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIW 398
NV+I L G++ A ++M K C + +TY ++ C + A ++
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
++M K P + T+ +I GLC +A + LEEM+ + + P + L +
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFRE----MVSAGCSPDVVSYGIMVDILCKAGRVDE 254
P + T S+L + K N A + F E S G + V Y M+DIL K+ RV E
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSV--YATMIDILGKSNRVLE 64
Query: 255 AVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIG 314
V++ M +++C +++ ++ T+ R+EDAI F + + ++ L+
Sbjct: 65 MKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ 124
Query: 315 AFCKANKFKNVRRVLKEMESNGVTPNSR--TCNVIISSLISQGRTDRAFEVFRRM-IKIC 371
K ++ + + ++ G NSR N+++ L R+D A +VF+ M + C
Sbjct: 125 EMVKESELEAACHIFRKY-CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKI-----WKDMKSKRFVPSLHTFSALINGLCQNGNA 426
PD D+Y +++K FC +++ A + W+ + K + + L++ LC G
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR-ISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 427 MKACVLLEEMIEKGIR-PSR 445
A +L +++ KG++ P R
Sbjct: 243 DDAIEILGKILRKGLKAPKR 262
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 24/255 (9%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
+ LDA + V + E++ +L++ A + E + + R L+ E+L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 109 AR-----IRQYQIMW-------------DIVTKMRNKGMLNVE-TFCIVMRKYARAHKVD 149
R + Y M +++ MR+KG + ++ RA K+
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 150 EAVYTFN--VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDLKTYS 205
EAV N +M + +P + +N L+ LC +A M + + +TY
Sbjct: 351 EAVSVINKEMMQGHCLP-TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
L++G +D +A + EM+ P V +Y +M+ LC R EAV +++M
Sbjct: 410 TLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Query: 266 NCMPTSFIYSVLVHT 280
+ +P S ++ L +
Sbjct: 470 DMVPESSVWKALAES 484
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 192/475 (40%), Gaps = 86/475 (18%)
Query: 63 SPELVENVLKRFENAGMSAFRFFEWA-ERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV 121
+P L+ +LK+ +N ++A + FE A ER +Y H Y MI+ L + + M ++
Sbjct: 11 TPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVI 69
Query: 122 TKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDK-------------------- 160
+M+ F V+R ++RA ++++A+ F + +
Sbjct: 70 ERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKE 129
Query: 161 ----------------YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLK 202
+EV + A N L+ LC+ A ++F M +G + PD
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY-PDRD 188
Query: 203 TYSILLEGWGKDPNLPKARE----TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
+Y IL++G+ + L +A F + G D+V Y I++D LC AG VD+A+E+
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 259 VKDMDDN-------------------------------------NCMPTSFIYSVLVHTY 281
+ + +P YS +
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL-KEMESNGVTPN 340
E ++ + + L M KG + +Y A + A C+A K K V+ KEM P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIW 398
NV+I L G++ A ++M K C + +TY ++ C + A ++
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
++M K P + T+ +I GLC +A + LEEM+ + + P + L +
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFRE----MVSAGCSPDVVSYGIMVDILCKAGRVDE 254
P + T S+L + K N A + F E S G + V Y M+DIL K+ RV E
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSV--YATMIDILGKSNRVLE 64
Query: 255 AVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIG 314
V++ M +++C +++ ++ T+ R+EDAI F + + ++ L+
Sbjct: 65 MKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ 124
Query: 315 AFCKANKFKNVRRVLKEMESNGVTPNSR--TCNVIISSLISQGRTDRAFEVFRRM-IKIC 371
K ++ + + ++ G NSR N+++ L R+D A +VF+ M + C
Sbjct: 125 EMVKESELEAACHIFRKY-CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKI-----WKDMKSKRFVPSLHTFSALINGLCQNGNA 426
PD D+Y +++K FC +++ A + W+ + K + + L++ LC G
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWR-ISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 427 MKACVLLEEMIEKGIR-PSR 445
A +L +++ KG++ P R
Sbjct: 243 DDAIEILGKILRKGLKAPKR 262
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 24/255 (9%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESL 108
+ LDA + V + E++ +L++ A + E + + R L+ E+L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 109 AR-----IRQYQIMW-------------DIVTKMRNKGMLNVE-TFCIVMRKYARAHKVD 149
R + Y M +++ MR+KG + ++ RA K+
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 150 EAVYTFN--VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDLKTYS 205
EAV N +M + +P + +N L+ LC +A M + + +TY
Sbjct: 351 EAVSVINKEMMQGHCLP-TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
L++G +D +A + EM+ P V +Y +M+ LC R EAV +++M
Sbjct: 410 TLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Query: 266 NCMPTSFIYSVLVHT 280
+ +P S ++ L +
Sbjct: 470 DMVPESSVWKALAES 484
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 214/507 (42%), Gaps = 88/507 (17%)
Query: 62 ASPELVENVLKRFENAG--MSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWD 119
+SP++ +++++ G A+ E R + +V A + + L + + W
Sbjct: 146 SSPDVFDSLVRACTQNGDAQGAYEVIEQT-RAEGFCVSVHALNNFMGCLLNVNEIDRFWK 204
Query: 120 IVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
+ +M + G + NV TF +V+ + + K+ EA+ F M K V N+ +FN ++ C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 179 KSRNVRKAQEIFDSM---KGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSP 234
K+ ++R A ++ M G F P+ TY+ ++ G+ K L A +MV +G
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
+ +YG +VD +AG DEA+ + +M + + IY+ +V+ +E IE A+
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 295 LEMERKGIK-----------------------------------ADVVVYNALIGAFCKA 319
+M K ++ D+V +N L+ F +
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRD 444
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTY 378
K ++L M G++ ++ + +I + +G+ +RA E++ MIK+ + + Y
Sbjct: 445 KKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIY 504
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVP------------------------------ 408
++ +R A + M+ K V
Sbjct: 505 NSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGE 564
Query: 409 ---SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLT 465
SL TF+ +IN LC+ G+ KA +L+ M+E+G+ P +T+G L K + ++ +
Sbjct: 565 KSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVV 624
Query: 466 FL-----------HEKINLLVKEPLCD 481
L HE I L + PL D
Sbjct: 625 ELHDYLILQGVTPHEHIYLSIVRPLLD 651
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 171/415 (41%), Gaps = 23/415 (5%)
Query: 54 ALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHT---VRAYHLMIESLAR 110
L+Q + L+ VL+ F ++ A F+ W R A + A +MI L
Sbjct: 47 TLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVG 106
Query: 111 IRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAF 170
R++ D ++ M N +++VE K + H + + ++ + F
Sbjct: 107 SRRFD---DALSIMAN--LMSVEG-----EKLSPLHVLSGLIRSYQA-----CGSSPDVF 151
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
+ L+ A ++ + + A E+ + + F + + + + + + ++EM S
Sbjct: 152 DSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDS 211
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
G +V ++ +++ CK ++ EA+ V M P +++++ +
Sbjct: 212 LGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRF 271
Query: 290 AIDAFLE---MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
A+ + M + + V YN++I FCKA + R+ +M +GV N RT
Sbjct: 272 ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGA 331
Query: 347 IISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
++ + G +D A + M K + Y ++ +++ AM + +DM SK
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
T + ++ GLC+NG +A ++ EK + V L +++K+
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKK 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 114/273 (41%), Gaps = 41/273 (15%)
Query: 85 FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYA 143
F+ ++ + ++ ++ R ++ I+ M +G+ L+ +F ++ Y
Sbjct: 418 FQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYL 477
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKT 203
+ K++ A+ ++ M K NL +N +++ L K A+ + ++M+ + D+ T
Sbjct: 478 KEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK---DIVT 534
Query: 204 YSILLEGWGKDPNLPKARETFREMVSAGC--SPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
Y+ LL K N+ +A + +M S +V++ IM++ LCK G ++A EV+K
Sbjct: 535 YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKF 594
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M + +G+ D + Y LI +F K
Sbjct: 595 MVE-----------------------------------RGVVPDSITYGTLITSFSKHRS 619
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
+ V + + GVTP+ I+ L+ +
Sbjct: 620 QEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 7/369 (1%)
Query: 87 WAE-RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYAR 144
W E ++RN + Y+++I ++ + + MR G + +F ++ Y +
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 145 AHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTY 204
D+A + M + + +N + ALC + A+E+ SM PD+ +Y
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA---PDVVSY 377
Query: 205 SILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDD 264
+ L+ G+ K +A F ++ + P +V+Y ++D LC++G ++ A + ++M
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 265 NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA-LIGAFCKANKFK 323
P Y+ LV + + A + + EM RKGIK D Y +G + K
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMI 382
R + + ++ P+ NV I L G +A E R++ ++ PD TYT +I
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
+ + E + MA ++ +M KR PS+ T+ LI G + G +A EM ++G+R
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 443 PSRVTFGKL 451
P+ +T L
Sbjct: 618 PNVMTHNAL 626
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 178/396 (44%), Gaps = 26/396 (6%)
Query: 64 PELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTK 123
P L+ VL AFRFF W +RQ + + +A+ M+E LA + + +
Sbjct: 85 PNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAER 144
Query: 124 MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
+ GM H++D+ + + ++ L + LL K
Sbjct: 145 SIDLGM----------------HEIDDLL----IDGSFDKLIALKLLDLLLWVYTKKSMA 184
Query: 184 RKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
K F+ M KG F P ++ +I+L+ + KA + M+ G P V+++
Sbjct: 185 EKFLLSFEKMIRKG-FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
M+D KAG ++ ++ +M N + Y++L++ + ++E+A +M R G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
+N LI +CK F + V EM + G+ P + T N+ I +L GR D A
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 362 EVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
E+ M PD +Y ++ + + + A ++ D+++ PS+ T++ LI+GLC
Sbjct: 364 ELLSSM---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
++GN A L EEM + I P +T+ L + +K
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 174/419 (41%), Gaps = 76/419 (18%)
Query: 75 ENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML---- 130
+N M R F R+ +A T +++ +IE + + W + +M N G+
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 131 ----------------------------NVETFCIVMRKYARAHKVDEAVYTFNVMDKYE 162
+V ++ +M Y + K EA F+ + +
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKAR 221
+ ++ +N L+ LC+S N+ AQ + + M + PD+ TY+ L++G+ K+ NL A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 222 ETFREMVSAGC------------------------------------SPDVVSYGIMVDI 245
E + EM+ G +PD+ Y + +D
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
LCK G + +A+E + + +P Y+ ++ Y + + A + + EM RK +
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
V+ Y LI KA + + + EM+ GV PN T N ++ + G D E +R
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID---EAYR 641
Query: 366 RMIKICE----PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
+ K+ E P+ +YTM+I C+ + + +K++K+M K P +T AL L
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKAR 221
VP ++ + ++ ++ + A+ ++D M + R P + TY +L+ G K L +A
Sbjct: 547 VPDHVT-YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
+ EM G P+V+++ ++ +CKAG +DEA + M++ P + Y++L+
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKN 665
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
+ E+ + + EM K I+ D + AL K ++ + V
Sbjct: 666 CDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 169/372 (45%), Gaps = 7/372 (1%)
Query: 97 TVRAYHLMIESLARI-RQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYT 154
T+ Y++++ ++ + + +V KM++ G+ + T+ ++ R EA
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGK 213
F M + +N LL KS ++A ++ + M F P + TY+ L+ + +
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
D L +A E +M G PDV +Y ++ +AG+V+ A+ + ++M + C P
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
++ + YG + + + F E+ G+ D+V +N L+ F + V V KEM+
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMD 392
G P T N +IS+ G ++A V+RRM+ PD TY ++ +
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
+ K+ +M+ R P+ T+ +L++ NG + L E + G+ R L+
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVL--LK 598
Query: 453 QLLIKEKREDVL 464
L++ + D+L
Sbjct: 599 TLVLVCSKCDLL 610
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 207/491 (42%), Gaps = 58/491 (11%)
Query: 30 QEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPE-----LVENVLKRFE------NAG 78
QE A + E + S VT +A L+ G P+ L E VL F N+
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 79 MSAFR----FFEWAERQRNYAHT-----VRAYHLMIESLARIRQYQIMWDIVTKMRNKG- 128
+SA+ E E + A V Y ++ R + + I +MRN G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 129 MLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQE 188
N+ TF ++ Y K E + F+ ++ + ++ +N LL+ ++ +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 189 IFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC 247
+F MK F P+ +T++ L+ + + + +A +R M+ AG +PD+ +Y ++ L
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 248 KAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG-------------------VENR-- 286
+ G +++ +V+ +M+D C P Y L+H Y +E R
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 287 --------------IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
+ +A AF E++ +G D+ N+++ + + VL M
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEM 391
+ G TP+ T N ++ ++ E+ R ++ K +PD +Y +I +C M
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
A +I+ +M++ VP + T++ I + +A ++ MI+ G RP++ T+ +
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 452 RQLLIKEKRED 462
K R+D
Sbjct: 776 VDGYCKLNRKD 786
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 5/329 (1%)
Query: 127 KGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA 186
+ ML+ I++ + +V A FN + + ++ ++ L+SA S R+A
Sbjct: 168 QSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREA 227
Query: 187 QEIFDSMK-GRFEPDLKTYSILLEGWGK-DPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
+F M+ +P L TY+++L +GK K +M S G +PD +Y ++
Sbjct: 228 VNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI- 286
Query: 245 ILCKAGRV-DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
CK G + EA +V ++M Y+ L+ YG +R ++A+ EM G
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+V YN+LI A+ + + +M G P+ T ++S G+ + A +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 364 FRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
F M C+P+ T+ IKM+ R + MKI+ ++ P + T++ L+ Q
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 423 NGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
NG + + +EM G P R TF L
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 141/308 (45%), Gaps = 37/308 (12%)
Query: 133 ETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS 192
ETF ++ Y+R ++A+ + M V +L+ +N +L+AL + +++++
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 193 MK-GRFEPDLKTYSILLEGW--GKDPNL-------------------------------- 217
M+ GR +P+ TY LL + GK+ L
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 218 -PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
P+A F E+ G SPD+ + MV I + V +A V+ M + P+ Y+
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L++ + + + E+ KGIK D++ YN +I A+C+ + ++ R+ EM ++G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAM 395
+ P+ T N I S + + A V R MIK C P+ +TY ++ +C+ N D A
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Query: 396 KIWKDMKS 403
+D+++
Sbjct: 790 LFVEDLRN 797
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
D M + + ++++ G E R+ A + F ++ G DV Y +LI AF + +++
Sbjct: 166 DYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYR 225
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI--CEPDADTYTMM 381
V K+ME +G P T NVI++ G +K PDA TY +
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 382 IKMFCERNEMDM-AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
I C+R + A +++++MK+ F T++AL++ ++ +A +L EM+ G
Sbjct: 286 ITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 441 IRPSRVTFGKL 451
PS VT+ L
Sbjct: 345 FSPSIVTYNSL 355
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V T+ I+M+ + +++ + +M V N +N LL ALCK+ V +A+ +
Sbjct: 181 DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLM 240
Query: 191 DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
MK EP+ T++IL+ + + L ++ + S G PDVV+ ++++LC G
Sbjct: 241 SEMK---EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
RV EA+EV++ ++ + LV Y ++ A F+EMERKG +V YN
Sbjct: 298 RVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYN 357
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
LI +C + +M+++ + N T N +I L GRTD ++ M
Sbjct: 358 LLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM--- 414
Query: 371 CEPDADT--------YTMMIKMF---------------------------------CERN 389
D+DT Y +I F CE+
Sbjct: 415 --QDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKG 472
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
MD + M + VPS+ LI+ Q+G ++ L+ +M+ +G P TF
Sbjct: 473 GMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTF 531
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 157/317 (49%), Gaps = 6/317 (1%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V T VM +V EA+ ++ ++ A N L+ C +R AQ F
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
M+ + + P+++TY++L+ G+ L A +TF +M + + ++ ++ L
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFI--YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
GR D+ +++++ M D++ + + I Y+ +++ + ENR EDA++ L+ME+ +A V
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRA--V 459
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+ + + C+ +++ +M G P+ + +I G+ + + E+ M
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 368 I-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
+ + P + T+ +I FC+++++ +K +DM + VP +++ L+ LC G+
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 427 MKACVLLEEMIEKGIRP 443
KA +L M+EK I P
Sbjct: 580 QKAWLLFSRMVEKSIVP 596
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 17/298 (5%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
V A + +++ + + ++ +M KG L NVET+ +++ Y +D A+ TFN
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-------GRFEPDLKTYSILLE 209
M + N A FN L+ L +I + M+ R +P Y+ ++
Sbjct: 378 DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIY 433
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
G+ K+ A E +M P V + LC+ G +D+ M +P
Sbjct: 434 GFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP 491
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
+ + L+H Y +IE++++ +M +G +NA+I FCK +K N + +
Sbjct: 492 SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFV 551
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFC 386
++M G P++ + N ++ L +G +A+ +F RM+ K PD ++ + MFC
Sbjct: 552 EDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSL--MFC 607
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 13/247 (5%)
Query: 220 ARETFREMVSAGCSPDVV----SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP-TSFIY 274
A ETFR A P + +Y + LC R D +++ +M D+ +P I+
Sbjct: 59 ALETFRW---ASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIF 115
Query: 275 SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
++ +G I+ I + + GIK + V+N+++ K + ++M +
Sbjct: 116 VTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMA 175
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDM 393
+G+ + T +++ L R F++ + M P+A Y ++ C+ ++
Sbjct: 176 SGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGR 235
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A + +MK P+ TF+ LI+ C +++ VLLE+ G P VT K+ +
Sbjct: 236 ARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVME 291
Query: 454 LLIKEKR 460
+L E R
Sbjct: 292 VLCNEGR 298
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 209/499 (41%), Gaps = 61/499 (12%)
Query: 10 KLLCKFVSFARMLSTGEPPPQEVADLTETVCKVMMSSPGV-TLDAALNQTGVRASPELVE 68
KL+ F SF+ T P ++ L + + K + S+ TL + + S L+E
Sbjct: 26 KLIHGFFSFSS--KTNPNPNKQQQILIDYISKSLQSNDTWETLSTKF--SSIDLSDSLIE 81
Query: 69 NVLKRFEN--AGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIR---------QYQIM 117
+L RF+N A FF W+ RN H +++Y L I L + R + ++
Sbjct: 82 TILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLL 141
Query: 118 -----WDIVTKMRNKGMLNVET---FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAA 169
D+V + + ++ T F ++++ YA+ ++ F + ++
Sbjct: 142 NSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVIT 201
Query: 170 FNGLLSALCKSRNVRKAQEIFD-SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
N L+ KS+ I++ ++ R P+ T I+++ K+ L + + +
Sbjct: 202 LNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRIC 261
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
C P V+ +V + + R++E++ ++K + N + + YS++V+ E +
Sbjct: 262 GKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLV 321
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A F EM ++G A+ VY + C+ K R+L EME +GV+P T N +I
Sbjct: 322 SARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI 381
Query: 349 SSLISQGRTDRAFE---------------VFRRMIKICE--------------------- 372
G ++ E F M+K
Sbjct: 382 GGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFV 441
Query: 373 PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVL 432
PD TY+ +I+ F E N++D A+K++ +M+ ++ P F +LI GLC G
Sbjct: 442 PDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKY 501
Query: 433 LEEMIEKGIRPSRVTFGKL 451
L+ M ++ I P+ + L
Sbjct: 502 LKIMKKRLIEPNADIYDAL 520
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 133 ETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-D 191
ETF ++ +AR ++ + VM + + +AFN ++ ++ K NV +A EI
Sbjct: 375 ETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTK 434
Query: 192 SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
S+ F PD TYS L+ G+ + ++ +A + F EM SP + ++ LC G+
Sbjct: 435 SIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGK 494
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
V+ + +K M P + IY L+ + +I D +A
Sbjct: 495 VEAGEKYLKIMKKRLIEPNADIYDALIKAF---QKIGDKTNA 533
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 123/247 (49%), Gaps = 7/247 (2%)
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
+ + D+ + +++ KD N A+ F EM G P+V++Y M+D C +GR
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
+A ++++ M + P +S L++ + E ++ +A + + EM R I + YN++I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF----RRMIK 369
FCK ++ + +R+L M S G +P+ T + +I+ R D E+F RR I
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 370 ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
+ TYT +I FC+ ++D A + +M S P TF ++ GLC KA
Sbjct: 183 ---ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 430 CVLLEEM 436
+LE++
Sbjct: 240 FAILEDL 246
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGK 213
F M + + N+ +N ++ + C S A ++ M + + PD+ T+S L+ + K
Sbjct: 33 FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+ + +A E ++EM+ P ++Y M+D CK RVD+A ++ M C P
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
+S L++ Y R+++ ++ F EM R+GI A+ V Y LI FC+ + +L EM
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
S GV P+ T + +++ L S+ +AF + + K
Sbjct: 213 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 4/248 (1%)
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGKDP 215
M + + ++ ++ LCK N AQ +F M KG F P++ TY+ +++ +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF-PNVLTYNCMIDSFCHSG 59
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
A + R M+ +PD+V++ +++ K +V EA E+ K+M + PT+ Y+
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
++ + ++R++DA M KG DVV ++ LI +CKA + N + EM
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMA 394
G+ N+ T +I G D A ++ MI PD T+ M+ C + E+ A
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 395 MKIWKDMK 402
I +D++
Sbjct: 240 FAILEDLQ 247
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
DVV +VD LCK G A + +M + P Y+ ++ ++ R DA
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
M K I D+V ++ALI AF K K + KEM + P + T N +I Q
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 355 GRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
R D A + M K C PD T++ +I +C+ +D M+I+ +M + V + T+
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ LI+G CQ G+ A LL EMI G+ P +TF
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 111/217 (51%), Gaps = 2/217 (0%)
Query: 119 DIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
++ T+M KG+ NV T+ ++ + + + +A M + ++ ++ F+ L++A
Sbjct: 31 NLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAF 90
Query: 178 CKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
K R V +A+EI+ M + P TY+ +++G+ K + A+ M S GCSPDV
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDV 150
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
V++ +++ CKA RVD +E+ +M + + Y+ L+H + ++ A D E
Sbjct: 151 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
M G+ D + ++ ++ C + + +L++++
Sbjct: 211 MISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 1/167 (0%)
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M + IKADVV+ A++ CK N + + EM G+ PN T N +I S GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 357 TDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
A ++ R MI K PD T++ +I F + ++ A +I+K+M P+ T+++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+I+G C+ A +L+ M KG P VTF L K KR D
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+A + F EM KGI +V+ YN +I +FC + ++ + ++L+ M + P+ T + +I
Sbjct: 28 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87
Query: 349 SSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
++ + + + A E+++ M++ P TY MI FC+++ +D A ++ M SK
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
P + TFS LING C+ + EM +GI + VT+ L
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 180/424 (42%), Gaps = 42/424 (9%)
Query: 75 ENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVE 133
EN + +W + Y +V AY++++ ++ R +Q+ I + +MR + + +
Sbjct: 132 ENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRY 191
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
T+ ++ + + D A+ M++ V +L ++ L+ + + KA IF +
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL 251
Query: 194 K-GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
K PDL Y+ ++ +GK +AR +EM AG P+ VSY ++ + + +
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 253 DEAVEVVKDMDDNNCM-----------------------------------PTSFIYSVL 277
EA+ V +M + NC P Y+ +
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTI 371
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ YG +AI F M+RK I+ +VV YN +I + K + + +++EM+S G+
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
PN+ T + IIS G+ DRA +F+++ E D Y MI + M A +
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLI 456
+ ++K +P I L + G +A + + E G FG + L
Sbjct: 492 LLHELKLPDNIPR----ETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYS 547
Query: 457 KEKR 460
+ +R
Sbjct: 548 RNQR 551
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 141/307 (45%), Gaps = 6/307 (1%)
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREM 227
A+N +L + +++ A +FD M+ R PD TYS L+ +GK+ A ++M
Sbjct: 157 AYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM 216
Query: 228 VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI 287
S D+V Y ++++ + +A+ + + + P Y+ +++ YG
Sbjct: 217 EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
+A EM G+ + V Y+ L+ + + +KF V EM+ + TCN++
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIM 336
Query: 348 I---SSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
I L DR F R+M EP+ +Y +++++ E A+ +++ M+ K
Sbjct: 337 IDVYGQLDMVKEADRLFWSLRKMD--IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVL 464
++ T++ +I + KA L++EM +GI P+ +T+ + + K + D
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 465 TFLHEKI 471
L +K+
Sbjct: 455 ATLFQKL 461
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV ++ ++R Y A EA++ F +M + ++ QN+ +N ++ K+ KA +
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 191 DSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV------ 243
M+ R EP+ TYS ++ WGK L +A F+++ S+G D V Y M+
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 244 -------------------------DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
IL KAGR +EA V + ++ + ++ ++
Sbjct: 484 GLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMI 543
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG-V 337
+ Y R + I+ F +M G D V ++ A+ K +F+ V +EM+ G V
Sbjct: 544 NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 603
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD 376
P+ + ++S + + FE+ + + E D +
Sbjct: 604 FPDE-----VHFQMLSLYSSKKDFEMVESLFQRLESDPN 637
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 189/442 (42%), Gaps = 13/442 (2%)
Query: 15 FVSFARMLSTGEPPPQEVAD-LTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKR 73
++ F +M S G P + + L VCK + + L + Q G R + ++
Sbjct: 200 YLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDG 259
Query: 74 FENAGM--SAFRFFEWAERQR---NYAHTVRAY-HLMIESLARIRQYQIMWDIVTKMRNK 127
F AG A + E ++ N A T+R + H + L + ++++ + K N
Sbjct: 260 FLIAGRVDEALKQLEMMRVRKLNPNEA-TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNL 318
Query: 128 GMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQ 187
+ + + + A + + + + ++ +P + + FN +S L K ++ +
Sbjct: 319 QRVGYDAVLYCLSNNSMAKETGQ--FLRKIGERGYIPDS-STFNAAMSCLLKGHDLVETC 375
Query: 188 EIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDIL 246
IFD R +P Y +L++ + ++M G V SY ++D L
Sbjct: 376 RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCL 435
Query: 247 CKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
CKA R++ A + +M D P ++ + Y V ++ ++ G K DV
Sbjct: 436 CKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDV 495
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
+ ++ +I C+A + K+ KEM G+ PN T N++I S S G TDR+ ++F +
Sbjct: 496 ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAK 555
Query: 367 MIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
M + PD Y I+ FC+ ++ A ++ K M P T+S LI L ++G
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
Query: 426 AMKACVLLEEMIEKGIRPSRVT 447
+A + + G P T
Sbjct: 616 ESEAREMFSSIERHGCVPDSYT 637
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 175/400 (43%), Gaps = 38/400 (9%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
Y+++I + + +V +M +G NV T+ I++ + A +VDEA+ +M
Sbjct: 217 TYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 159 DKYEVPQNLA-----------------AFNGLLSALCKSRNVRK---------------A 186
++ N A AF L+ + K N+++ A
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 187 QEIFDSMKGRFE----PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
+E ++ E PD T++ + K +L + F VS G P Y ++
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVL 396
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
V L A R E +K M + + + + Y+ ++ RIE+A EM+ +GI
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
++V +N + + K V VL+++ +G P+ T ++II+ L AF+
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Query: 363 VFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
F+ M++ EP+ TY ++I+ C + D ++K++ MK P L+ ++A I C
Sbjct: 517 CFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC 576
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
+ KA LL+ M+ G++P T+ L + L + RE
Sbjct: 577 KMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRE 616
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 61/336 (18%)
Query: 186 AQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
AQ F MK P + Y+ +++ K +L A F++M S GC PD +Y I++
Sbjct: 169 AQISFLGMK----PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHG 224
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME-RKGIKA 304
+CK G VDEA+ +VK M+ P F Y++L+ + + R+++A+ M RK
Sbjct: 225 VCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPN 284
Query: 305 DVVVYNALIGAF-----CKA--------NKFKNVRRV---------------------LK 330
+ + + G F CKA K N++RV L+
Sbjct: 285 EATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLR 344
Query: 331 EMESNGVTPNSRTCNVIISSLISQG---RTDRAFEVFRRMIKICEPDADTYTMMIKMFCE 387
++ G P+S T N +S L+ T R F+ F + + +P + Y ++++
Sbjct: 345 KIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGF--VSRGVKPGFNGYLVLVQALLN 402
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ K M + S+++++A+I+ LC+ A + L EM ++GI P+ VT
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 448 F-----------------GKLRQLLIKEKREDVLTF 466
F G L +LL+ + DV+TF
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 498
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
+L+ WG+ + F ++ G P Y ++D L K+ +D A + M +
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
C P F Y++L+H + +++AI +ME++G + +V Y LI F A +
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD----TYTMM 381
+ L+ M + PN T + + +AFEV ++ E D++ Y +
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEV---LVGFMEKDSNLQRVGYDAV 326
Query: 382 IKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
+ + + + + + ++P TF+A ++ L + + ++ C + + + +G+
Sbjct: 327 LYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV 386
Query: 442 RPSRVTFGKLRQLLIKEKR 460
+P + L Q L+ +R
Sbjct: 387 KPGFNGYLVLVQALLNAQR 405
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
++ + L + G + ++E++K++ D+ + + VL+ ++G + D F ++
Sbjct: 115 VLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFL 174
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
G+K +YNA+I A K+N ++M S+G P+ T N++I + +G D A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 361 FEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALING 419
+ ++M + P+ TYT++I F +D A+K + M+ ++ P+ T ++G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ + KA +L +EK RV +
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGY 323
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 197/486 (40%), Gaps = 61/486 (12%)
Query: 27 PPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPEL----VENVLKRFENAGMSAF 82
P Q + + + +C + S L L P L + VL RF++ A
Sbjct: 38 PQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAI 97
Query: 83 RFFEWAERQRNYAHTVRAYHLMIESLARIRQY----QIMWDIVTKMRNKGMLNV------ 132
FF+W + V Y L++ L +++ Q + +++ K ++V
Sbjct: 98 TFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVS 157
Query: 133 ---------ETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
F ++++ Y + V+E F + ++ N LL+ L K +
Sbjct: 158 ATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLM 217
Query: 184 RKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIM 242
+++ M + P+ T++IL + D N + + +M G PD+V+Y +
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 243 VDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
V C+ GR+ EA + K M +P Y+ L+ + R+ +A F M +GI
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR------ 356
K D + YN LI A+CK + +++L EM N V P+ TC VI+ + +GR
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 357 ---------TDRAFEVFRRMI-KIC---------------------EPDADTYTMMIKMF 385
D FEV +I +C E +TY +I+
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+ ++ A+ + +K++ V T+ ALI LC+ G +A L+ EM + ++P
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
Query: 446 VTFGKL 451
G L
Sbjct: 518 FICGAL 523
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 174/380 (45%), Gaps = 44/380 (11%)
Query: 118 WDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSA 176
W + + M G+ N TF I+ + E M++ +L +N L+S+
Sbjct: 221 WQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 177 LCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
C+ +++A ++ M + R PDL TY+ L++G KD + +A +TF MV G PD
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL 295
+SY ++ CK G + ++ +++ +M N+ +P F V+V + E R+ A++ +
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 296 EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK---EMESNGVTPNSRT--------C 344
E+ R + V + LI + C+ K + +L E E + P + C
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 345 NVIISSLISQGRTDRAFEV-----FRRMIK-IC--------------------EPDADTY 378
+ I +L+ +G+ +V +R +I +C +PD+
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFIC 520
Query: 379 TMMIKMFCERNEMDMAMKIWK--DMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
++ +C+ + D A ++ M+ + F P ++++L+ +C+ G K + L+E
Sbjct: 521 GALVYGYCKELDFDKAERLLSLFAMEFRIFDP--ESYNSLVKAVCETGCGYKKALELQER 578
Query: 437 IEK-GIRPSRVTFGKLRQLL 455
+++ G P+R+T L Q+L
Sbjct: 579 MQRLGFVPNRLTCKYLIQVL 598
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 3/242 (1%)
Query: 222 ETFREMVSAG--CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
+ FR +VSA C+ D V + ++V K G V+E V +++ D+ + + L++
Sbjct: 150 DVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLN 209
Query: 280 TYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP 339
+ +ED + M R GI + +N L FC + F+ V L++ME G P
Sbjct: 210 GLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEP 269
Query: 340 NSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIW 398
+ T N ++SS +GR AF +++ M + PD TYT +IK C+ + A + +
Sbjct: 270 DLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTF 329
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
M + P +++ LI C+ G ++ LL EM+ + P R T + + ++E
Sbjct: 330 HRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVRE 389
Query: 459 KR 460
R
Sbjct: 390 GR 391
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 197/455 (43%), Gaps = 72/455 (15%)
Query: 39 VCKVMMSSPGVTLDAALNQTGVRA--------SPELVENVLKRFENAGMSAFRFFEWAER 90
+C V++ + +L L+Q+G R+ S +V +L+R FF W
Sbjct: 27 LCNVLLVA---SLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYS 83
Query: 91 QR-NYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFC-IVMRKYARAHKV 148
R Y H+ AY + ++ R + D++ M+ G+ +T I++ R+ K
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA---------------------- 186
+ A+ + M++ N + ++ +L AL K +R A
Sbjct: 144 ESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRV 203
Query: 187 ----------------------------QEIFDSMKG--RFEPDLKTYSILLEGWGKDPN 216
+ +F+ +KG RF+ D +Y+I + G+G +
Sbjct: 204 IIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGD 263
Query: 217 LPKARETFREM------VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
L A F+EM + PD+ +Y ++ +LC G+ +A+ V ++ + P
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
+ Y +L+ R++DA+ + EM+ G D +VYN L+ KA K ++ +
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERN 389
+M GV + T N++I L GR + F +F + K + DA T++++ C
Sbjct: 384 KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
+++ A+K+ ++M+++ F L T S+L+ G + G
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQG 478
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 1/194 (0%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETF 224
++ +N L+ LC + A ++D +K EPD TY IL++G K + A +
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY 347
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
EM G PD + Y ++D KA +V EA ++ + M + + Y++L+
Sbjct: 348 GEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN 407
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
R E F ++++KG D + ++ + C+ K + ++++EME+ G + + T
Sbjct: 408 GRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTI 467
Query: 345 NVIISSLISQGRTD 358
+ ++ QGR D
Sbjct: 468 SSLLIGFHKQGRWD 481
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 143 ARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLK 202
AR +V+ +F+V D ++ G LS CK EIF+ M G +
Sbjct: 580 ARGQRVEAKPDSFDV-DMMNTFLSIYLSKGDLSLACK------LFEIFNGM-GVTDLTSY 631
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+ ++ + K AR +M C+ D+ +Y +++ L K GR D A V+ +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
+Y+ L++ G R+++A F M+ GI DVV YN +I KA K
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVI 347
K + LK M G PN T ++
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARE 222
P N + + L+ CKS + A I+ M+ F PD Y+ LL+G K + +A +
Sbjct: 322 PDN-STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ 380
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
F +MV G +Y I++D L + GR + + D+ + +S++
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
E ++E A+ EME +G D+V ++L+ F K ++ +++K + + PN
Sbjct: 441 REGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
+Y M+ K G A V+ M +N C Y+V++ G R + A +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
++G D+V+YN LI A KA + ++ M+SNG+ P+ + N +I G+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 358 DRAFEVFRRMIKI-CEPDADTYTMM 381
A++ + M+ C P+ T T++
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 145/363 (39%), Gaps = 36/363 (9%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y+++I+ L R + + + + ++ KG ++ TF IV + R K++ AV M+
Sbjct: 397 YNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEME 456
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLP 218
+L + LL K +++ ++ G P++ ++ +E K P
Sbjct: 457 TRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSK 516
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE--AVEVVKDMDDNNCMPTSFIYSV 276
T P S G +DI+ G D+ + E V M+D+ + ++
Sbjct: 517 DKDYT----------PMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYM-DQ 565
Query: 277 LVHT-------YGVE--NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
L H +G+ R+E D+F DV + N + + +
Sbjct: 566 LAHQRNQPKPLFGLARGQRVEAKPDSF----------DVDMMNTFLSIYLSKGDLSLACK 615
Query: 328 VLKEMESNGVTP-NSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMF 385
+ + GVT S T N ++SS + +G A V +M + C D TY ++I+
Sbjct: 616 LFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGL 675
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+ D+A + + + + ++ LIN L + +A L + M GI P
Sbjct: 676 GKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDV 735
Query: 446 VTF 448
V++
Sbjct: 736 VSY 738
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 208/462 (45%), Gaps = 32/462 (6%)
Query: 1 MIKICNPRKKLLCKFVSFARMLSTGEPPPQEVADLTET----VCKVM---MSSPGVTLDA 53
MI I N ++ C F+ R ST E P + + + VC ++ +SP L +
Sbjct: 11 MINIGNSIRR--C-FILNHRFFST-ELTPTTITPINQDHLLRVCTILYQQQNSPDSRLVS 66
Query: 54 ALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQR-NYAHTVRAYHLMIESLARIR 112
L+ T + + E V F + RFF +++ ++ HT + M+ + R
Sbjct: 67 KLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSR 126
Query: 113 QYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNG 172
+ W++ ++ +G++N +TF IV++ A A ++ + V F++M+ + N+ N
Sbjct: 127 NMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNR 186
Query: 173 LLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
+ LCK + V +A+ +F +K +PD TY +++G+ +L +A + + M+ G
Sbjct: 187 GVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGF 246
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDM--DDNNCMPTSFIYSVLVHTYGVENRIEDA 290
D+ + +++ L K + DEA +V M + F Y V++ RI+ A
Sbjct: 247 DVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGF-YRVMIDWLCKNGRIDMA 305
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
F EM +G+ D + + +LI + +++ +E+ P+ + +I
Sbjct: 306 RKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKG 361
Query: 351 LISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
L+ R A EVFR+MI + CEP TY M+++ R K P
Sbjct: 362 LVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRR------------GRKGPDPL 409
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ + + G+ + G ++ +E +++G+ R + K
Sbjct: 410 VNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKF 451
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 161/350 (46%), Gaps = 4/350 (1%)
Query: 115 QIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLL 174
QI ++ +L T I + +Y + + A F+ M K V N+ FN L+
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLV 211
Query: 175 SALCKSRNVRKAQEIFDSMKGRFE--PDLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
+ C + A + + M F+ PD TY+ +L+ K L +E +M G
Sbjct: 212 NGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGL 271
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
P+ V+Y +V CK G + EA ++V+ M N +P Y++L++ + + ++
Sbjct: 272 VPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLE 331
Query: 293 AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLI 352
M+ ++ DVV YN LI + R+++++ME++GV N T N+ + L
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
Query: 353 SQGRTDRAFEVFRRMIKI--CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL 410
+ + + + ++ + PD TY +IK + + ++ A+++ ++M K +
Sbjct: 392 KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
T + +++ LC+ +A LL ++G VT+G L +E++
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 164/384 (42%), Gaps = 43/384 (11%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVM 139
AF+ E +Q N + Y+++I L + +++ M++ K +V T+ ++
Sbjct: 294 AFQIVELM-KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRN----VRKAQEIFDSMKG 195
EA M+ V N N L LCK RK +E+ D M G
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD-MHG 411
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
F PD+ TY L++ + K +L A E REM G + ++ ++D LCK ++DEA
Sbjct: 412 -FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
++ + Y L+ + E ++E A++ + EM++ I V +N+LIG
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 316 FCKANKFKNVRRVLKEMESNGV-----------------------------------TPN 340
C K + E+ +G+ P+
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
+ TCN++++ L +G T++A F +I+ E D TY MI FC+ ++ A + +
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 401 MKSKRFVPSLHTFSALINGLCQNG 424
M+ K P T+++ I+ L ++G
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDG 674
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 143/307 (46%), Gaps = 42/307 (13%)
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPN---LPK 219
P + A F+ LSA A +IF M + + +P+L T + LL G + P+ +
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 220 ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
ARE F +MV G S +V ++ +VLV+
Sbjct: 188 AREVFDDMVKIGVSLNVQTF-----------------------------------NVLVN 212
Query: 280 TYGVENRIEDAIDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
Y +E ++EDA+ M + + D V YN ++ A K + +++ +L +M+ NG+
Sbjct: 213 GYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV 272
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKI 397
PN T N ++ G AF++ M + PD TY ++I C M +++
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG-KLRQLLI 456
MKS + P + T++ LI+G + G +++A L+E+M G++ ++VT L+ L
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 457 KEKREDV 463
+EKRE V
Sbjct: 393 EEKREAV 399
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 144/285 (50%), Gaps = 8/285 (2%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARE 222
VP + +N LL ALCKS + A E+F +K R +P+L TY+IL+ G K +
Sbjct: 151 VP-GIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDW 209
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
RE+ +G +P+ V+Y M+ + K R+++ +++ M F +V
Sbjct: 210 MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALI 269
Query: 283 VENRIEDAIDAFLEMERKGIKA-DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
R E+A + E+ R G ++ D+V YN L+ + K V +L+E+E G+ P+
Sbjct: 270 KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDD 329
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
T +I++ L++ G T A + + ++ +P T +I C+ +D AM+++
Sbjct: 330 YTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFAS 389
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR-PS 444
M+ V T++++++ LC++G + A LL KG++ PS
Sbjct: 390 ME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 430
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 173/371 (46%), Gaps = 6/371 (1%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
+ + ++ + SL + R + ++ G+L +V T+ +++ Y R +DEA
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
M + + ++ +N L+S K+ + + ++FD M PD+ +Y+ L+ + K
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 215 PNLPKARETFREMVS-AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+A + E + AG P + +Y I++D LCK+G D A+E+ K + + P
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMT 190
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y++L++ R+ E+++ G + V Y ++ + K + + ++ +M+
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD--TYTMMIKMFCERNEM 391
G T + ++S+LI GR + A+E +++ D +Y ++ ++ + +
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
D + ++++ K P +T + ++NGL GN A L + E G++PS VT L
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
Query: 452 RQLLIKEKRED 462
L K D
Sbjct: 371 IDGLCKAGHVD 381
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 148/309 (47%), Gaps = 5/309 (1%)
Query: 174 LSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC 232
+++LCK RN+ +A+ + D ++ PD+ TY+ L++G+ + + +A R M AG
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 233 SPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
PDV +Y ++ K ++ +++ +M + P + Y+ L+ Y R +A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 293 AFLE-MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSL 351
E + G+ + YN L+ A CK+ N + K ++S V P T N++I+ L
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGL 198
Query: 352 ISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL 410
R + R + K P+A TYT M+KM+ + ++ ++++ MK + +
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR-VTFGKLRQLLIKEKREDVLTFLHE 469
A+++ L + G A +A + E++ G R V++ L L K+ D + L E
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 470 KINLLVKEP 478
+I + +P
Sbjct: 319 EIEMKGLKP 327
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 175/392 (44%), Gaps = 44/392 (11%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y ++ ++ +QY + IV+++ G L+ F V+ ++ + +++AV M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFE--PDLKTYSILLEGWGKD 214
+ + + +N L+ + ++ E+ D M +G + P+++T+++L++ W K
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 215 PNLPKARETFREMVSAGCSPDVVSY----------------------------------- 239
+ +A E ++M G PD V+Y
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 240 --GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
GI+V C+ GRV + + V+ M + +++ L++ + VE D ID L +
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF-VEVMDRDGIDEVLTL 320
Query: 298 ERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
++ +KADV+ Y+ ++ A+ A + +V KEM GV P++ +++ +
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 357 TDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+A E+ +I P+ +T +I +C MD AM+++ M P++ TF L
Sbjct: 381 PKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ G + KA +L+ M G++P TF
Sbjct: 441 MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 173 LLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
L++ L + +AQ +F ++ + P L +Y+ LL E+ +G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE--- 288
D + + +++ ++G +++AV+ + M + PT+ Y+ L+ YG+ + E
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+ +D LE + ++ +N L+ A+CK K + V+K+ME GV P++ T N I
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 349 SSLISQGRTDRA-FEVFRRMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+ + +G T RA EV +M+ + +P+ T +++ +C + ++ + MK R
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 406 FVPSLHTFSALINGLCQ 422
+L F++LING +
Sbjct: 291 VEANLVVFNSLINGFVE 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+A+ F+ + G P ++SY ++ + + +V +++ + S ++ ++
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG-- 336
+ + +EDA+ A L+M+ G+ YN LI + A K + +L M G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 337 -VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMA 394
V PN RT NV++ + + + + A+EV ++M + PD TY + + ++ E A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 395 MK--IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL- 451
+ K + ++ P+ T ++ G C+ G + M E + + V F L
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 452 ---RQLLIKEKREDVLTFLHE 469
+++ ++ ++VLT + E
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKE 323
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 116/234 (49%), Gaps = 7/234 (2%)
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++++L + GR EA V K + + P+ Y+ L+ V+ + E+E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
K D + +NA+I AF ++ ++ + L +M+ G+ P + T N +I G+ +R+
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 362 EVFRRMIK----ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
E+ M++ P+ T+ ++++ +C++ +++ A ++ K M+ P T++ +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 418 NGLCQNGNAMKA-CVLLEEMIEK-GIRPSRVTFGKLRQLLIKEKR-EDVLTFLH 468
Q G ++A ++E+M+ K +P+ T G + +E R D L F+
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 160/337 (47%), Gaps = 18/337 (5%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETF-CIVMRKYARAHKVDEAVYTFNVM 158
A L ++ LA+ +++ + ++ +N + ETF ++R Y RA D A+ F M
Sbjct: 69 AMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEM 128
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE---PDLKTYSILLEGWGKDP 215
DK P+ + +FN LL+A S + ++FD R+ PD +Y +L++ +
Sbjct: 129 DKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSG 188
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
KA E R+M G ++++ ++ L K G VDEA + +M + C + +Y+
Sbjct: 189 KPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN 248
Query: 276 VLVHTYGVEN--RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
V + E+ R+++ ++ EM G+K D V YN L+ A+C ++V + +E
Sbjct: 249 VRLMNAAKESPERVKELME---EMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE 305
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMD 392
PN+ T +I L G D+ VF++ + + PD T + + + N M+
Sbjct: 306 Q----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRME 361
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALIN---GLCQNGNA 426
A + + +K K+F P L T + GL GNA
Sbjct: 362 DARGVARIVK-KKFPPRLVTEWKKLEEKLGLYSKGNA 397
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYG--IMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+DP+ KA ++ + + SP Y + V L K+ R + +++ +N + T
Sbjct: 44 QDPD--KALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKT 101
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
S L+ +YG + + A+ F EM++ G VV +NAL+ A ++ F+ V ++
Sbjct: 102 ETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFD 161
Query: 331 EMES--NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCE 387
E N +TP+ + ++I S G+ ++A E+ R M +K E +T ++ +
Sbjct: 162 EFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYK 221
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSA-LINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+D A +W +M +K ++ L+N ++ +K L+EEM G++P V
Sbjct: 222 NGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKE--LMEEMSSVGLKPDTV 279
Query: 447 TFGKL 451
++ L
Sbjct: 280 SYNYL 284
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 152/326 (46%), Gaps = 35/326 (10%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETF-CIVMRKYARAHKVDEAVYTFNVM 158
A L + LA+ R++ + ++ +N + E F ++R Y +A + A+ TF M
Sbjct: 69 AQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQM 128
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLP 218
D+Y P++ +FN LL+A S+N K ++FD + R+ +
Sbjct: 129 DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKII----------------- 171
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
PD +SYGI++ C +G ++A+E+++ M T+ ++ ++
Sbjct: 172 ---------------PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTIL 216
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+ + +E A + + EM +KG + D YN I + K + + V+ +++EM S G+
Sbjct: 217 SSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLK 275
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKI 397
P++ + N ++++ +G D A +V+ + C P+A T+ +I C + I
Sbjct: 276 PDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAI 335
Query: 398 WKDMKSKRFVPSLHTFSALINGLCQN 423
+K +P +T L+ GL +N
Sbjct: 336 FKKSVYMHKIPDFNTLKHLVVGLVEN 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 253 DEAVEVVKDMDDNNCMPTSFIYS--VLVHTYGVENRIEDAIDAFLEMERKGIK-ADVVVY 309
D+A+++ ++ D++ P S Y+ + V R D I+ +E + K + Y
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSD-IETLIESHKNDPKIKEEPFY 105
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF----R 365
+ LI ++ +A+ F + R ++M+ G ++ + N ++++ + D+ ++F +
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQ 165
Query: 366 RMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
R KI PD +Y ++IK +C+ + A++I + M+ K + F+ +++ L + G
Sbjct: 166 RYNKII-PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 426 AMKACVLLEEMIEKG 440
A L EM++KG
Sbjct: 225 LEVADNLWNEMVKKG 239
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 109/277 (39%), Gaps = 41/277 (14%)
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYG--IMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
DP+ KA + + + SP Y + V L K R + +++ ++ +
Sbjct: 45 DPD--KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEE 102
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
YS L+ +YG + A+ F +M++ G V +NAL+ A + F V ++ E
Sbjct: 103 PFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDE 162
Query: 332 MES--NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCER 388
+ N + P+ + ++I S G ++A E+ R+M K E +T ++ ++
Sbjct: 163 IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKK 222
Query: 389 NEMDMAMKIW----------------------------------KDMKSKRFVPSLHTFS 414
E+++A +W ++M S P +++
Sbjct: 223 GELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYN 282
Query: 415 ALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
L+ C+ G +A + E + P+ TF L
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTL 319
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 182/418 (43%), Gaps = 44/418 (10%)
Query: 62 ASPELVENVLK--RFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARI-RQYQIMW 118
A P +NV R A + FF W +Q NY H RA+ M+ + ++ R+Y +
Sbjct: 34 AKPLTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSID 93
Query: 119 DIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
I+ +++ G + F +++ + R H D+A+ + M + N A N ++
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVN 153
Query: 178 CKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGW---GKDPNLPKARETFREMVSAGCSP 234
K V A EIF+ ++ R + ++ I L + G +L + + M+ G P
Sbjct: 154 FKLNVVNGALEIFEGIRFR---NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYP 210
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
+ +G ++ + C+ G V EA +VV M + + ++S+LV + + A+D F
Sbjct: 211 NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLF 270
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
+M + G ++V Y +LI F VL +++S G+ P+ CN++I +
Sbjct: 271 NKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRL 330
Query: 355 GRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDM-------------------- 393
GR + A +VF + K PD T+ ++ C + D+
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLL 390
Query: 394 ------------AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
A+K+ M K F +T++ ++ LC+ G A +A + + ++I K
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR-GGAPRAAIKMYKIIIK 447
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 146/345 (42%), Gaps = 41/345 (11%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPNLPKARETF 224
N F +L C++ V +A ++ M + +S+L+ G+ + KA + F
Sbjct: 211 NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLF 270
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
+M+ GCSP++V+Y ++ G VDEA V+ + P + ++++HTY
Sbjct: 271 NKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRL 330
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
R E+A F +E++ + D + +++ + C + KF V R+ + G + T
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTG 387
Query: 345 NVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
N++ + G A +V M K D TYT+ + C A+K++K +
Sbjct: 388 NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIK 447
Query: 404 KRFVPSLHTFSALINGLCQNG------NAMKACVL----------------------LEE 435
++ H SA+I+ L + G + K C+L +EE
Sbjct: 448 EKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEE 507
Query: 436 -------MIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHEKIN 472
M E GI P+R T+ + L KEK E V L E I
Sbjct: 508 AYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQ 552
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 151/357 (42%), Gaps = 35/357 (9%)
Query: 120 IVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALC 178
++ +M +G N E F ++R R V EA +M + ++ ++ L+S
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 179 KSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
+S +KA ++F+ M + P+L TY+ L++G+ + +A ++ S G +PD+V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH--------------TYGV 283
+M+ + GR +EA +V ++ +P + ++ ++ T+G+
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 284 ENRIEDAIDAFLE------------------MERKGIKADVVVYNALIGAFCKANKFKNV 325
+ L M K D Y + A C+ +
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEP-DADTYTMMIKM 384
++ K + ++ + II SLI G+ + A +F+R I P D +YT+ IK
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
++ A + DMK P+ T+ +I+GLC+ K +L E I++G+
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 157/389 (40%), Gaps = 12/389 (3%)
Query: 20 RMLSTGEPPPQE-VADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAG 78
RM+ G P +E + C+ S + + +G+ S + ++ F +G
Sbjct: 202 RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSG 261
Query: 79 --MSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFC 136
A F Q + + Y +I+ + + +++K++++G+ C
Sbjct: 262 EPQKAVDLFN-KMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLC 320
Query: 137 -IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG 195
+++ Y R + +EA F ++K ++ + F +LS+LC S I +
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGT 380
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
F DL T ++L + K A + M + D +Y + + LC+ G A
Sbjct: 381 DF--DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
+++ K + + +S ++ + + A+ F + DVV Y I
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPD 374
+A + + + +M+ G+ PN RT IIS L + T++ ++ R I+ E D
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Query: 375 ADT----YTMMIKMFCERNEMDMAMKIWK 399
+T Y+++ + + +E + WK
Sbjct: 559 PNTKFQVYSLLSRYRGDFSEFRSVFEKWK 587
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 152/376 (40%), Gaps = 32/376 (8%)
Query: 116 IMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKY-EVPQNLAAFNGLL 174
++W + K +LN +F + +Y R + + + NV E P +L N
Sbjct: 1 MLWRCNWVKQRKRILNTLSFSSIHGQYPREYTAAKPLTHDNVYSCLRESPADLKTLN-FF 59
Query: 175 SALCKSRNVRKAQEIFDSMKGRFEPDLKTYS----------------------ILLEGWG 212
K N FD M G E + Y +LLE +
Sbjct: 60 FWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFW 119
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
+ KA E + M S G P+ + +M+D+ K V+ A+E+ + + N F
Sbjct: 120 RGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRN----FF 175
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMER---KGIKADVVVYNALIGAFCKANKFKNVRRVL 329
+ + + + D + + ++R +G + + ++ C+ +V+
Sbjct: 176 SFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV 235
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCER 388
M +G++ + ++++S G +A ++F +MI+I C P+ TYT +IK F +
Sbjct: 236 GLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDL 295
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+D A + ++S+ P + + +I+ + G +A + + ++ + P + TF
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 449 GKLRQLLIKEKREDVL 464
+ L + D++
Sbjct: 356 ASILSSLCLSGKFDLV 371
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 176/408 (43%), Gaps = 18/408 (4%)
Query: 55 LNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQY 114
L+ +R + + V +VL + +FF+WA RQ + HT +H + + L +
Sbjct: 103 LSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKLV 162
Query: 115 QIMWDIVTKMRNKGMLNVET---FC-IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAF 170
+M D + R+ G + C ++ YA A + D A+ F M + + +
Sbjct: 163 TLMIDFLD--RSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGY 220
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS- 229
+ LL+AL + + IFD + R T+SIL++ + K L +A + R ++
Sbjct: 221 HVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPN 280
Query: 230 --AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY---GVE 284
AGC + GI+VD LC + EA +++ ++ + Y++ + G
Sbjct: 281 DPAGCGSGL---GILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFL 337
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
N D + +E G + +V YN+++ K N V +L EM GV+PN +T
Sbjct: 338 NNPADFLQKISPLE--GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTM 395
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
N + G D A E++R +I P A +Y +I C ++ A + K
Sbjct: 396 NAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAID 455
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ TFS L N LC G A L+ E+ + P R+ K+
Sbjct: 456 RGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI 503
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 163/388 (42%), Gaps = 54/388 (13%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y+ M+ L + ++DI+T+M +G+ N +T + + +A VDEA+ +
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEG--WGKDP 215
+ ++N L+ LC + +V +A ++ +G F KT+S L W P
Sbjct: 420 EIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGG-KTFSTLTNALCWKGKP 478
Query: 216 NLPKARETFREMVSAGCSPDVVSYGI----MVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
++ RE+V A D++ I ++ LC G+V++A+ ++ ++ + + + TS
Sbjct: 479 DMA------RELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINELFNKSGVDTS 531
Query: 272 F-IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK------------ 318
F +++ L++ R + A + M+ KG +Y +I C+
Sbjct: 532 FKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTL 591
Query: 319 ------------------------ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
A K K R V M+ +G+TP + +++ S +
Sbjct: 592 LKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKN 651
Query: 355 GRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFS 414
+ A F + + + Y +MI C+ N++D AM ++MK + PS+ +
Sbjct: 652 EKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYE 711
Query: 415 ALINGLCQNGNAMKACVLLEEMIEKGIR 442
I LC +A L+ E + G R
Sbjct: 712 VNIQKLCNEEKYDEAVGLVNEFRKSGRR 739
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 116/253 (45%), Gaps = 7/253 (2%)
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+E ++ Y++ +EG G AR + M G +P V S +M+ K ++ +A+
Sbjct: 599 WEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADAL 658
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
D+ + +Y V++ N+++DA+ EM+ +G++ + Y I
Sbjct: 659 HFFHDLREQGKTKKR-LYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKL 717
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE--PD 374
C K+ ++ E +G + NV++ + + ++ +E + RM I + P+
Sbjct: 718 CNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAM---KSKGVYEAWTRMRNIEDKIPE 774
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
+ +I +F R +M++ +K ++ K + ++T++ L+ + N A A ++E
Sbjct: 775 MKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMN-QAEDAYEMVE 833
Query: 435 EMIEKGIRPSRVT 447
+ +G P+ T
Sbjct: 834 RIARRGYVPNERT 846
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 43/284 (15%)
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD 191
V+ + + + A K A +++MD+ + +A+ +L + K+ + A F
Sbjct: 603 VQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFH 662
Query: 192 SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
++ + + + Y +++ G K L A EM G P + Y + + LC +
Sbjct: 663 DLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEK 722
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
DEAV +V + + T+FI +VL+H M+ KG VY A
Sbjct: 723 YDEAVGLVNEFRKSGRRITAFIGNVLLHN---------------AMKSKG------VYEA 761
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR--RMIK 369
+ +N+ + EM+S G + L S GR D E+ R +I+
Sbjct: 762 W-------TRMRNIEDKIPEMKSLGE----------LIGLFS-GRIDMEVELKRLDEVIE 803
Query: 370 ICEP-DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
C P D TY M+++M N+ + A ++ + + + +VP+ T
Sbjct: 804 KCYPLDMYTYNMLLRMIV-MNQAEDAYEMVERIARRGYVPNERT 846
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 177/404 (43%), Gaps = 42/404 (10%)
Query: 86 EWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYAR 144
EW R+ ++ V ++L+I++ + QY+ + ++ + E T+ ++++ Y
Sbjct: 143 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCM 202
Query: 145 AHKVDEAVYTFNVMDKYEV-PQNLA--AFNGLLSALCKSR-NVRKAQEIFDSMK-GRFEP 199
A ++ A M + V P+ + +N + L K + N +A ++F MK R +P
Sbjct: 203 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 262
Query: 200 DLKTYSILLEGWGK-------------------DPNL----------------PKARETF 224
+TY++++ +GK PN+ KA E F
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
++ G PDV Y +++ +AG A E+ M C P Y+++V YG
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
DA F EM+R GI + + L+ A+ KA ++KEM NGV P++
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 345 NVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
N +++ G+ + ++ M C D TY ++I ++ + ++ +++ ++K
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
K F P + T+++ I + +K + EEMI+ G P T
Sbjct: 503 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 155/348 (44%), Gaps = 39/348 (11%)
Query: 59 GVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMW 118
GV +E ++KR N A F+ +R R T Y+LMI + + + W
Sbjct: 227 GVTVYNAYIEGLMKRKGNT-EEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSW 284
Query: 119 DIVTKMR-NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
+ +MR ++ N+ T+ ++ +AR ++A F + + + ++ +N L+ +
Sbjct: 285 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 344
Query: 178 CKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
++ A EIF M+ EPD +Y+I+++ +G+ A F EM G +P +
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI----------------------- 273
S+ +++ KA V + +VK+M +N P +F+
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Query: 274 ------------YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
Y++L++ YG +E + F+E++ K + DVV + + IGA+ +
Sbjct: 465 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+ V +EM +G P+ T V++S+ S+ + ++ V R M K
Sbjct: 525 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 38/222 (17%)
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
PDV+ + +++D + + EA + + ++ +PT Y++L+ Y + IE A
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 294 FLEMERKGIKA---DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+EM+ + V VYNA I K
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMK-------------------------------- 240
Query: 351 LISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
+G T+ A +VF+RM + C+P +TY +MI ++ + ++ M+ K++ +M+S + P+
Sbjct: 241 --RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 298
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ T++AL+N + G KA + E++ E G+ P + L
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 340
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 168/369 (45%), Gaps = 42/369 (11%)
Query: 85 FEWAERQRNYAHTVRAYHLMIESLAR---IRQYQIMWDIVTKMRNKGMLNVETFCIVMRK 141
F+W + Q+NY Y++MI AR + Q + ++ + K K + ET+ ++
Sbjct: 130 FKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKP--DAETYDALINA 187
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPD 200
+ RA + A+ + M + + + + +N L++A S N R+A E+ M PD
Sbjct: 188 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 247
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
L T++I+L + KA F M A PD ++ I++ L K G+ +A+++
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 261 DMDDN--NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
M + C P ++ ++H Y V+ IE+ F M +G+K ++V YNAL+GA+
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV 367
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTY 378
VL +++ NG+ P D +Y
Sbjct: 368 HGMSGTALSVLGDIKQNGIIP----------------------------------DVVSY 393
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
T ++ + + A +++ M+ +R P++ T++ALI+ NG +A + +M +
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 439 KGIRPSRVT 447
GI+P+ V+
Sbjct: 454 DGIKPNVVS 462
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 160/347 (46%), Gaps = 5/347 (1%)
Query: 95 AHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVY 153
A + Y+ +I + ++ ++ KM + G+ ++ T IV+ Y + +A+
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 154 TFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK---GRFEPDLKTYSILLEG 210
F +M +V + FN ++ L K +A ++F+SM+ PD+ T++ ++
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 329
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+ + R F MV+ G P++VSY ++ G A+ V+ D+ N +P
Sbjct: 330 YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 389
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
Y+ L+++YG + A + FL M ++ K +VV YNALI A+ + +
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 331 EMESNGVTPN-SRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERN 389
+ME +G+ PN C ++ + S+ + + + + + Y I +
Sbjct: 450 QMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAA 509
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
E++ A+ +++ M+ K+ TF+ LI+G C+ +A L+EM
Sbjct: 510 ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 191/437 (43%), Gaps = 57/437 (13%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVMRKYARAHKV 148
+Q V +Y ++ S R RQ ++ MR + NV T+ ++ Y +
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSIL 207
EAV F M++ + N+ + LL+A +S+ + + + R + Y+
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ + L KA ++ M D V++ I++ C+ + EA+ +K+M+D +
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
T +YS ++ Y + ++ +A F +M+ G + DV+ Y +++ A+ + K+
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 621
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRA-------------------FEVFRR-- 366
+ EME+NG+ P+S C+ ++ + G+ FE+F
Sbjct: 622 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 681
Query: 367 ----------MIKICEPDADTYTM-----MIKMFCERNEMDMAMKIWKDMKSKRFVPSLH 411
+I++ +P + ++ M+ +F + +++ MK++ + + +L
Sbjct: 682 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 741
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR------VTFGK----------LRQLL 455
T++ L+ L GN K +LE M GI+PS ++FG+ +RQ L
Sbjct: 742 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKL 801
Query: 456 --IKEKREDVL-TFLHE 469
++ K E ++ TF HE
Sbjct: 802 ESLRNKGEGLIPTFRHE 818
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 204 YSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD 263
Y++++ + + +AR F EM C PD +Y +++ +AG+ A+ ++ DM
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
P+ Y+ L++ G +A++ +M G+ D+V +N ++ A+ ++
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI---CEPDADTYTM 380
+ M+ V P++ T N+II L G++ +A ++F M + C PD T+T
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
++ ++ + E++ +++ M ++ P++ +++AL+ +G + A +L ++ + G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 441 IRPSRV-------TFGKLRQ---------LLIKEKRE-DVLTF 466
I P V ++G+ RQ ++ KE+R+ +V+T+
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 177/404 (43%), Gaps = 42/404 (10%)
Query: 86 EWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYAR 144
EW R+ ++ V ++L+I++ + QY+ + ++ + E T+ ++++ Y
Sbjct: 165 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCM 224
Query: 145 AHKVDEAVYTFNVMDKYEV-PQNLA--AFNGLLSALCKSR-NVRKAQEIFDSMK-GRFEP 199
A ++ A M + V P+ + +N + L K + N +A ++F MK R +P
Sbjct: 225 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 284
Query: 200 DLKTYSILLEGWGK-------------------DPNL----------------PKARETF 224
+TY++++ +GK PN+ KA E F
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
++ G PDV Y +++ +AG A E+ M C P Y+++V YG
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
DA F EM+R GI + + L+ A+ KA ++KEM NGV P++
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 345 NVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
N +++ G+ + ++ M C D TY ++I ++ + ++ +++ ++K
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
K F P + T+++ I + +K + EEMI+ G P T
Sbjct: 525 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 155/348 (44%), Gaps = 39/348 (11%)
Query: 59 GVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMW 118
GV +E ++KR N A F+ +R R T Y+LMI + + + W
Sbjct: 249 GVTVYNAYIEGLMKRKGNT-EEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSW 306
Query: 119 DIVTKMR-NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
+ +MR ++ N+ T+ ++ +AR ++A F + + + ++ +N L+ +
Sbjct: 307 KLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 366
Query: 178 CKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
++ A EIF M+ EPD +Y+I+++ +G+ A F EM G +P +
Sbjct: 367 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 426
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI----------------------- 273
S+ +++ KA V + +VK+M +N P +F+
Sbjct: 427 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
Query: 274 ------------YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
Y++L++ YG +E + F+E++ K + DVV + + IGA+ +
Sbjct: 487 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 546
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+ V +EM +G P+ T V++S+ S+ + ++ V R M K
Sbjct: 547 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 38/222 (17%)
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
PDV+ + +++D + + EA + + ++ +PT Y++L+ Y + IE A
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 294 FLEMERKGIKA---DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+EM+ + V VYNA I K
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMK-------------------------------- 262
Query: 351 LISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
+G T+ A +VF+RM + C+P +TY +MI ++ + ++ M+ K++ +M+S + P+
Sbjct: 263 --RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 320
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ T++AL+N + G KA + E++ E G+ P + L
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 362
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 173 LLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
L+ ALC +V + E+ +K +P Y+ L+ G+ + N E M++
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAI 291
P + Y ++ LC + EA + K++ D P +Y+ ++ + + + A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 292 DAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSL 351
+ EM +KG++ + YN +I K + V EM NG +CN +I
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 352 ISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL 410
S G++D AFE+F+ M + P+A TY +IK FC+ N+++ +K++K++K+ PS
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSG 458
Query: 411 HTFSALINGL 420
++AL+ L
Sbjct: 459 MAYAALVRNL 468
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 10/309 (3%)
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSIL 207
V+EA+ +NV+ + ++ N +L K+R + + E+ M E D + L
Sbjct: 161 VEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMV-ESEFDSERIRCL 219
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ ++ + E ++ + G P Y ++ C+ G EV+ M N
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNH 279
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P+ +IY ++ + + +A F ++ KG D VVY +I FC+ + R+
Sbjct: 280 FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTM-----MI 382
+ EM G+ PN NV+I +G + M++ + TM MI
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR----NGYGGTMLSCNTMI 395
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
K FC + D A +I+K+M P+ T++ALI G C+ K L +E+ G++
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Query: 443 PSRVTFGKL 451
PS + + L
Sbjct: 456 PSGMAYAAL 464
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 15/241 (6%)
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE---VVKDMDDNNCMPT 270
D KA ++F + + G P+ V L + G V+EA+E V+KDM ++ + T
Sbjct: 125 DGKAVKAAKSFLD--TTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVT 182
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA--DVVVYNALIGAFCKANKFKNVRRV 328
SVL+ +D F E+ ++ +++ D LI A C +
Sbjct: 183 --CNSVLLGCLKARK-----LDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYEL 235
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCE 387
LK+ G+ P +IS G EV MI P Y +IK C
Sbjct: 236 LKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCM 295
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ A I+K++K K + P ++ +I G C+ G A L EMI+KG+RP+
Sbjct: 296 NKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA 355
Query: 448 F 448
+
Sbjct: 356 Y 356
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 170/398 (42%), Gaps = 41/398 (10%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
+ + ++ Y ++ +L R + + + +++K+ G+ + F ++ + + +D
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 406
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSIL 207
+A+ F M + + FN L+ K + ++ + D M +P+ +T +IL
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 466
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSY---------------------------- 239
++ W + +A +M S G PDVV++
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 240 --------GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAI 291
G +V+ C+ G+++EA+ M + P F+++ L+ + N ++
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 292 DAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSL 351
+ ME G+K DVV ++ L+ A+ K + +M G+ P+ +++
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 352 ISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS-KRFVPS 409
G ++A ++ +M K P+ YT +I +C EM AM+++K M P+
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
L T+ LI G + KA LL++M K + P+R T
Sbjct: 707 LTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 149/346 (43%), Gaps = 49/346 (14%)
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILL 208
EA FN + + +L + L++AL + ++ + + K +PD ++ ++
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM-DDNNC 267
+ NL +A + F +M +GC P ++ ++ K G+++E+ ++ M D
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL------IGAFCKANK 321
P ++LV + + +IE+A + +M+ G+K DVV +N L IG+ C A
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI----------- 370
++ M N V PN RTC I++ +G+ + A F RM ++
Sbjct: 517 M-----IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 571
Query: 371 -------------------------CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+PD T++ ++ + +M +I+ DM
Sbjct: 572 LIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 631
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
P +H FS L G + G KA +L +M + G+RP+ V + ++
Sbjct: 632 IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 53/340 (15%)
Query: 173 LLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
L++ L + ++A IF+++ + +P L TY+ L+ + + ++ G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV-------- 283
PD + + +++ ++G +D+A+++ + M ++ C PT+ ++ L+ YG
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 284 ----------------------------ENRIEDAIDAFLEMERKGIKADVVVYNAL--- 312
+ +IE+A + +M+ G+K DVV +N L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 313 ---IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
IG+ C A ++ M N V PN RTC I++ +G+ + A F RM +
Sbjct: 505 YARIGSTCTAEDM-----IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 370 I-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
+ P+ + +IK F N+MD ++ M+ P + TFS L+N G+ +
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 429 ACVLLEEMIEKGIRPSRVTFGKLRQLLIK----EKREDVL 464
+ +M+E GI P F L + + EK E +L
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQIL 659
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 168/379 (44%), Gaps = 9/379 (2%)
Query: 49 VTLDAALNQTGVRASPELVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIE 106
++L + + + G++ L ++ +G A + FE ++ T ++ +I+
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFE-KMKESGCKPTASTFNTLIK 432
Query: 107 SLARIRQYQIMWDIVTKMRNKGML--NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVP 164
+I + + ++ M ML N T I+++ + K++EA M Y V
Sbjct: 433 GYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVK 492
Query: 165 QNLAAFNGLLSALCKSRNVRKAQEIFDS--MKGRFEPDLKTYSILLEGWGKDPNLPKARE 222
++ FN L A + + A+++ + + +P+++T ++ G+ ++ + +A
Sbjct: 493 PDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
F M G P++ + ++ +D EVV M++ P +S L++ +
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
++ + + +M GI D+ ++ L + +A + + ++L +M GV PN
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKIC--EPDADTYTMMIKMFCERNEMDMAMKIWKD 400
IIS S G +A +V+++M I P+ TY +I F E + A ++ KD
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Query: 401 MKSKRFVPSLHTFSALING 419
M+ K VP+ T + +G
Sbjct: 733 MEGKNVVPTRKTMQLIADG 751
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTK--MRNKGMLNVETFCIVMRKYARAHKVDEAVYTF 155
V ++ + ++ ARI D++ + NK NV T ++ Y K++EA+ F
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKD 214
M + V NL FN L+ ++ E+ D M+ +PD+ T+S L+ W
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 215 PNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIY 274
++ + E + +M+ G PD+ ++ I+ +AG ++A +++ M P IY
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 275 SVLVHTYGVENRIEDAIDAFLEM-ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
+ ++ + ++ A+ + +M G+ ++ Y LI F +A + +LK+ME
Sbjct: 675 TQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Query: 334 SNGVTPNSRTCNVIISSLISQGRTD 358
V P +T +I S G ++
Sbjct: 735 GKNVVPTRKTMQLIADGWKSIGVSN 759
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 113/238 (47%), Gaps = 4/238 (1%)
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
DV S +++ L + GR EA + + + P+ Y+ LV + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
++E+ G+K D +++NA+I A ++ ++ ++M+ +G P + T N +I
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 355 GRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
G+ + + + M++ + +P+ T ++++ +C + +++ A I M+S P + T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 413 FSALINGLCQNGNAMKA-CVLLEEMIEKGIRPSRVTFGKLRQLLIKE-KREDVLTFLH 468
F+ L + G+ A +++ M+ ++P+ T G + +E K E+ L F +
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 158/341 (46%), Gaps = 5/341 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y+ +I + ++ ++ KM + G+ ++ T IV+ Y + +A+ F +M
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 143
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK---GRFEPDLKTYSILLEGWGKDPN 216
+V + FN ++ L K +A ++F+SM+ PD+ T++ ++ +
Sbjct: 144 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 203
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ R F MV+ G P++VSY ++ G A+ V+ D+ N +P Y+
Sbjct: 204 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 263
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+++YG + A + FL M ++ K +VV YNALI A+ + ++ME +G
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 337 VTPN-SRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAM 395
+ PN C ++ + S+ + + + + + Y I + E++ A+
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
+++ M+ K+ TF+ LI+G C+ +A L+EM
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 164/363 (45%), Gaps = 42/363 (11%)
Query: 91 QRNYAHTVRAYHLMIESLAR---IRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHK 147
Q+NY Y++MI AR + Q + ++ + K K + ET+ ++ + RA +
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKP--DAETYDALINAHGRAGQ 61
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSI 206
A+ + M + + + + +N L++A S N R+A E+ M PDL T++I
Sbjct: 62 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI 121
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN- 265
+L + KA F M A PD ++ I++ L K G+ +A+++ M +
Sbjct: 122 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 266 -NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKN 324
C P ++ ++H Y V+ IE+ F M +G+K ++V YNAL+GA+
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 241
Query: 325 VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKM 384
VL +++ NG+ P D +YT ++
Sbjct: 242 ALSVLGDIKQNGIIP----------------------------------DVVSYTCLLNS 267
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+ + A +++ M+ +R P++ T++ALI+ NG +A + +M + GI+P+
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 445 RVT 447
V+
Sbjct: 328 VVS 330
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 177/405 (43%), Gaps = 44/405 (10%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRN-KGMLNVETFCIVMRKYARAHKV 148
+Q V +Y ++ S R RQ ++ MR + NV T+ ++ Y +
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSIL 207
EAV F M++ + N+ + LL+A +S+ + + + R + Y+
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ + L KA ++ M D V++ I++ C+ + EA+ +K+M+D +
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
T +YS ++ Y + ++ +A F +M+ G + DV+ Y +++ A+ + K+
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 489
Query: 328 VLKEMESNGVTPNSRTCNVIISSLISQGRTDRA-------------------FEVFRR-- 366
+ EME+NG+ P+S C+ ++ + G+ FE+F
Sbjct: 490 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 549
Query: 367 ----------MIKICEPDADTYTM-----MIKMFCERNEMDMAMKIWKDMKSKRFVPSLH 411
+I++ +P + ++ M+ +F + +++ MK++ + + +L
Sbjct: 550 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 609
Query: 412 TFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR------VTFGK 450
T++ L+ L GN K +LE M GI+PS ++FG+
Sbjct: 610 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGE 654
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 204 YSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD 263
Y++++ + + +AR F EM C PD +Y +++ +AG+ A+ ++ DM
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
P+ Y+ L++ G +A++ +M G+ D+V +N ++ A+ ++
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI---CEPDADTYTM 380
+ M+ V P++ T N+II L G++ +A ++F M + C PD T+T
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
++ ++ + E++ +++ M ++ P++ +++AL+ +G + A +L ++ + G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 441 IRPSRV-------TFGKLRQ---------LLIKEKRE-DVLTF 466
I P V ++G+ RQ ++ KE+R+ +V+T+
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
IY++++ + N ++ A F EM++ K D Y+ALI A +A +++ ++ +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEM 391
+ P+ T N +I++ S G A EV ++M PD T+ +++ + +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK--GIRPSRVTFG 449
A+ ++ MK + P TF+ +I L + G + +A L M EK RP VTF
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 450 KLRQL 454
+ L
Sbjct: 193 SIMHL 197
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 166/348 (47%), Gaps = 40/348 (11%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTK-MRNKGMLNVETFC---IVMRKYARAHKVDEAVYTF 155
A+ +E+LA + + + +++ + N+ L E F IV+ YA+A+ +D ++ F
Sbjct: 82 AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL--YAQANMLDHSLRVF 139
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDP 215
++K+E+ + + + N LL A +++ ++A+ ++ M +
Sbjct: 140 RDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMY------------------ 181
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
G PD+ +Y M+ + C++G + +V +M+ P S +
Sbjct: 182 ---------------GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFG 226
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
+++ + E++ ++ M+ +G+ V YN I + CK K K + +L M S
Sbjct: 227 LMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSA 286
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMA 394
G+ PN+ T + +I ++ + A ++F+ M+ + C+PD++ Y +I C+ + + A
Sbjct: 287 GMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIR 442
+ + K+ K +VPS +L+NGL ++ +A L+ ++ EK R
Sbjct: 347 LSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTR 394
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 39/202 (19%)
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
+ + +D F+E R +K++ +A++ + +AN + RV +++E ++ ++ N
Sbjct: 99 VSNLLDGFIE-NRPDLKSERFAAHAIV-LYAQANMLDHSLRVFRDLEKFEISRTVKSLNA 156
Query: 347 IISSLISQGRTDRAFEVFRRMIKI--CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
++ + + A V+ M K+ EPD +TY MIK+FCE + I +M+ K
Sbjct: 157 LLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERK 216
Query: 405 RFVPSLHTFSALING-----------------------------------LCQNGNAMKA 429
P+ +F +I+G LC+ + +A
Sbjct: 217 GIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 430 CVLLEEMIEKGIRPSRVTFGKL 451
LL+ M+ G++P+ VT+ L
Sbjct: 277 KALLDGMLSAGMKPNTVTYSHL 298
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 158/352 (44%), Gaps = 8/352 (2%)
Query: 113 QYQIMWDIVTKMRNKGMLNVETF--CIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAF 170
++Q + + M+ G ++V T+ CI K+ A V +A+ + + N+
Sbjct: 113 RWQDLIQLFEWMQQHGKISVSTYSSCI---KFVGAKNVSKALEIYQSIPDESTKINVYIC 169
Query: 171 NGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGKDPN-LPKARETFREMV 228
N +LS L K+ + ++FD MK +PD+ TY+ LL G K N PKA E E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
G D V YG ++ I GR +EA ++ M P + YS L+++Y + +
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A + EM+ G+ + V+ L+ + K F R +L E+ES G N +++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 349 SSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
L G+ + A +F M K D ++MI C A ++ +D ++
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
L + ++ C+ G ++++M E+ + P TF L + IKEK
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 129/276 (46%), Gaps = 5/276 (1%)
Query: 188 EIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC 247
++F+ M+ + + TYS ++ G N+ KA E ++ + +V ++ L
Sbjct: 119 QLFEWMQQHGKISVSTYSSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLV 177
Query: 248 KAGRVDEAVEVVKDMDDNNCMPTSFIY-SVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
K G++D +++ M + P Y ++L V+N AI+ E+ GI+ D
Sbjct: 178 KNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDS 237
Query: 307 VVYNALIGAFCKAN-KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
V+Y ++ A C +N + + +++M+ G +PN + +++S +G +A E+
Sbjct: 238 VMYGTVL-AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMT 296
Query: 366 RMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
M I P+ T ++K++ + D + ++ +++S + + + L++GL + G
Sbjct: 297 EMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAG 356
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+A + ++M KG+R + L + KR
Sbjct: 357 KLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 157/323 (48%), Gaps = 16/323 (4%)
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKD 214
N+ DK E +++ +N +S L S+ A E++++M K PD T +IL+ K
Sbjct: 263 NLPDKEEF-RDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKA 321
Query: 215 PNLPK-ARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
K E F +M G +G +V C G +EA+ + +M+ + +
Sbjct: 322 GRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIV 381
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y+ L+ Y N IE+ F EM KG+K YN L+ A+ + + V +L+EME
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 334 SNGVTPNSRTCNVIISSLISQGRT----DRAFEVFRRMIKI-CEPDADTYTMMIKMFCER 388
G+ PN ++ +IS+ GRT D A + F RM K+ +P + +YT +I +
Sbjct: 442 DLGLEPNVKSYTCLISAY---GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ A +++M + PS+ T++++++ ++G+ K + + M+ + I+ +R+T+
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 449 GKL-----RQLLIKEKREDVLTF 466
L +Q L E R+ V F
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEF 581
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 9/361 (2%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVM----RKYARAHKVDEAVY 153
VR Y+ I L+ ++Y W++ M + C ++ RK R+ K E
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAK--EVWE 330
Query: 154 TFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWG 212
F M + V + F GL+ + C +A I M+ + + Y+ L++ +
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
K ++ + F EM G P +Y I++D + + D ++++M+D P
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 273 IYSVLVHTYGVENRIED-AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
Y+ L+ YG ++ D A DAFL M++ G+K Y ALI A+ + + +E
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNE 390
M G+ P+ T ++ + G T + E+++ M++ + TY ++ F ++
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 391 MDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGK 450
A + + PS+ T++ L+N + G K LL+EM ++P +T+
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 451 L 451
+
Sbjct: 631 M 631
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 4/348 (1%)
Query: 112 RQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAF 170
R + +W+I KM KG+ + + F +++ + +EA+ M+K + N +
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVY 382
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
N L+ A KS ++ + + +F M+ + +P TY+IL++ + + REM
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 230 AGCSPDVVSYGIMVDILCKAGRV-DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
G P+V SY ++ + ++ D A + M P+S Y+ L+H Y V E
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A +F EM ++GIK V Y +++ AF ++ + + K M + T N ++
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Query: 349 SSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
QG A +V K+ +P TY M++ + + ++ K+M +
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLK 622
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
P T+S +I + + +A + M++ G P ++ KLR +L
Sbjct: 623 PDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAIL 670
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 159/330 (48%), Gaps = 7/330 (2%)
Query: 55 LNQTGVRASPELVENVLKRFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIR 112
+++ GV+ S ++ ++K F + G+ A E++ ++T+ Y+ ++++ +
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTI-VYNTLMDAYNKSN 393
Query: 113 QYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFN 171
+ + + T+MR+KG+ + T+ I+M YAR + D M+ + N+ ++
Sbjct: 394 HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 172 GLLSALCKSRNVRK-AQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
L+SA +++ + A + F MK +P +Y+ L+ + KA +F EM
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
G P V +Y ++D ++G + +E+ K M T Y+ L+ + + +
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIE 573
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
A D E + G++ V+ YN L+ A+ + + + ++LKEM + + P+S T + +I
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 350 SLISQGRTDRAFEVFRRMIKICE-PDADTY 378
+ + RAF + M+K + PD +Y
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 24/283 (8%)
Query: 48 GVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIES 107
T + ++ R P++VE +L+ E+ G+ V++Y +I +
Sbjct: 414 AATYNILMDAYARRMQPDIVETLLREMEDLGLEP---------------NVKSYTCLISA 458
Query: 108 LARIRQYQIM-WDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQ 165
R ++ M D +M+ G+ + ++ ++ Y+ + ++A +F M K +
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKP 518
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETF 224
++ + +L A +S + K EI+ M + + + TY+ LL+G+ K +AR+
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
E G P V++Y ++++ + G+ + +++K+M N P S YS +++ +
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF--- 635
Query: 285 NRIEDAIDAFLE---MERKGIKADVVVYNALIGAFCKANKFKN 324
R+ D AF M + G D Y L K KN
Sbjct: 636 VRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKN 678
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 167/355 (47%), Gaps = 15/355 (4%)
Query: 103 LMIESLARIRQYQIMWDIVTK----MRNKGMLNVET--FCIVMRKYARAHKVDEAVYTFN 156
L++ +L R +Q + W++V++ +R + N F +++ Y + + A +
Sbjct: 112 LVLGTLVRFKQLK-KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 170
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDP 215
V+ K N+ ++ L+ + + A+ IF M+ EP TY I+L+ + +
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 216 NLPKARETFREMVSAGCSP---DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
+A E F ++ SP D Y +M+ + KAG ++A +V M ++
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
Y+ L+ E ++ + +M+R I+ DVV Y LI A+ +A + + V +EM
Sbjct: 291 TYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEM 391
GV P + N+++ + G ++A VF+ M + PD +YT M+ + ++M
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+ A K +K +K F P++ T+ LI G + + K + E+M GI+ ++
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 462
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 136/306 (44%), Gaps = 8/306 (2%)
Query: 173 LLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
L++A K N A+ + + K P++ +Y+ L+E +G+ A FR M S+G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN---CMPTSFIYSVLVHTYGVENRIE 288
P ++Y I++ + + EA EV + + D P +Y ++++ Y E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A F M KG+ V YN+L+ +K V ++ +M+ + + P+ + ++I
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 349 SSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
+ R + A VF M+ P Y +++ F ++ A ++K M+ R
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFL 467
P L +++ +++ + A + + G P+ VT+G L + K + + +
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 468 HEKINL 473
+EK+ L
Sbjct: 449 YEKMRL 454
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM- 193
+ +++ Y +A ++A F+ M VPQ+ +N L+S + V K I+D M
Sbjct: 257 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQ 313
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
+ +PD+ +Y++L++ +G+ +A F EM+ AG P +Y I++D +G V+
Sbjct: 314 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 373
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
+A V K M + P + Y+ ++ Y + +E A F ++ G + ++V Y LI
Sbjct: 374 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 433
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ KAN + + V ++M +G+ N I+ +
Sbjct: 434 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 10/236 (4%)
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
L K V E +E ++ + N F+ +L+ YG A + + G +
Sbjct: 123 LKKWNLVSEILEWLRYQNWWNFSEIDFL--MLITAYGKLGNFNGAERVLSVLSKMGSTPN 180
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
V+ Y AL+ ++ + K N + + M+S+G P++ T +I+ + + + A EVF
Sbjct: 181 VISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFE 240
Query: 366 RMI----KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
++ +PD Y MMI M+ + + A K++ M K S T+++L++
Sbjct: 241 TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET 300
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHEKINLLVK 476
K + ++M I+P V++ L + + +R E+ L+ E ++ V+
Sbjct: 301 SYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 353
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 167/355 (47%), Gaps = 15/355 (4%)
Query: 103 LMIESLARIRQYQIMWDIVTK----MRNKGMLNVET--FCIVMRKYARAHKVDEAVYTFN 156
L++ +L R +Q + W++V++ +R + N F +++ Y + + A +
Sbjct: 105 LVLGTLVRFKQLK-KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 163
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDP 215
V+ K N+ ++ L+ + + A+ IF M+ EP TY I+L+ + +
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 216 NLPKARETFREMVSAGCSP---DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
+A E F ++ SP D Y +M+ + KAG ++A +V M ++
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
Y+ L+ E ++ + +M+R I+ DVV Y LI A+ +A + + V +EM
Sbjct: 284 TYNSLMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEM 391
GV P + N+++ + G ++A VF+ M + PD +YT M+ + ++M
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+ A K +K +K F P++ T+ LI G + + K + E+M GI+ ++
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 455
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 136/306 (44%), Gaps = 8/306 (2%)
Query: 173 LLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
L++A K N A+ + + K P++ +Y+ L+E +G+ A FR M S+G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN---CMPTSFIYSVLVHTYGVENRIE 288
P ++Y I++ + + EA EV + + D P +Y ++++ Y E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
A F M KG+ V YN+L+ +K V ++ +M+ + + P+ + ++I
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 349 SSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV 407
+ R + A VF M+ P Y +++ F ++ A ++K M+ R
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 408 PSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFL 467
P L +++ +++ + A + + G P+ VT+G L + K + + +
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 468 HEKINL 473
+EK+ L
Sbjct: 442 YEKMRL 447
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 128/266 (48%), Gaps = 7/266 (2%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM- 193
+ +++ Y +A ++A F+ M VPQ+ +N L+S + V K I+D M
Sbjct: 250 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQ 306
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
+ +PD+ +Y++L++ +G+ +A F EM+ AG P +Y I++D +G V+
Sbjct: 307 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 366
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
+A V K M + P + Y+ ++ Y + +E A F ++ G + ++V Y LI
Sbjct: 367 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 426
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-- 371
+ KAN + + V ++M +G+ N I+ + A ++ M + C
Sbjct: 427 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESCGV 485
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKI 397
PD +++ + ++E++ A ++
Sbjct: 486 PPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 10/236 (4%)
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
L K V E +E ++ + N F+ +L+ YG A + + G +
Sbjct: 116 LKKWNLVSEILEWLRYQNWWNFSEIDFL--MLITAYGKLGNFNGAERVLSVLSKMGSTPN 173
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
V+ Y AL+ ++ + K N + + M+S+G P++ T +I+ + + + A EVF
Sbjct: 174 VISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFE 233
Query: 366 RMI----KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
++ +PD Y MMI M+ + + A K++ M K S T+++L++
Sbjct: 234 TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET 293
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR-EDVLTFLHEKINLLVK 476
K + ++M I+P V++ L + + +R E+ L+ E ++ V+
Sbjct: 294 SYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 346
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 162/366 (44%), Gaps = 39/366 (10%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQY----QIMWDIVTKMRNKGMLNVETF 135
+A F WA++Q Y + Y ++ + L + R + + ++V + G L+ +
Sbjct: 187 AALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAY 246
Query: 136 CIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG 195
V++ A+A K++ A F + + +N L+ KA EI++SM+
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME- 305
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
KT S+L D +Y +++ L K+GR+D A
Sbjct: 306 ------KTDSLL---------------------------DGSTYELIIPSLAKSGRLDAA 332
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
++ + M + P+ ++S LV + G R++ ++ ++EM+ G + ++ +LI +
Sbjct: 333 FKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDS 392
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPD 374
+ KA K R+ EM+ +G PN +II S G+ + A VF+ M K P
Sbjct: 393 YAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPT 452
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLE 434
TY+ +++M ++D AMKI+ M + P L ++ +L+ L A +L
Sbjct: 453 PSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILL 512
Query: 435 EMIEKG 440
EM G
Sbjct: 513 EMKAMG 518
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 116/244 (47%), Gaps = 2/244 (0%)
Query: 125 RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
+ +L+ T+ +++ A++ ++D A F M + ++ + + F+ L+ ++ K+ +
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 185 KAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
+ +++ M+G P + L++ + K L A + EM +G P+ Y +++
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
+ K+G+++ A+ V KDM+ +PT YS L+ + +++ A+ + M G++
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+ Y +L+ ++L EM++ G + + +V++ I D A +
Sbjct: 486 PGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKW 544
Query: 364 FRRM 367
R M
Sbjct: 545 LRFM 548
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
YN +I KA K + K+ + +G +++T N ++ +++G +AFE++ M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 369 KI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
K D TY ++I + +D A K+++ MK ++ PS FS+L++ + + G
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 428 KACVLLEEMIEKGIRPSRVTFGKL 451
+ + EM G RPS F L
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSL 389
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 27/387 (6%)
Query: 65 ELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKM 124
E VL+ + +GM+A + Y +I S A+ + M+++ +M
Sbjct: 484 EGARGVLRLVQESGMTA---------------DCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 125 RNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
N G+ N+ TF ++ ARA +V +A + ++ V + FN L+SA +S V
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 184 RKAQEIFDSMKGR---FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC--SPDVVS 238
+A ++ MK +PD + L++ + +A+E ++ + G +P+V
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV-- 646
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
Y I V+ K+G D A + KDM + + P +S L+ G +++A + +
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
+GI+ + Y++L+GA C A +K + ++++S + P T N +I++L +
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 359 RAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
+A E + + +P+ TY+M++ +++ +++ K+ K P+L I
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL-IMCRCI 825
Query: 418 NGLCQNGNAMKACVLLEEMIE-KGIRP 443
LC+ KAC E ++ K RP
Sbjct: 826 TSLCKR-RFEKACAGGEPVVSFKSGRP 851
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 5/304 (1%)
Query: 178 CKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
CK + R +E F K P + T+++L+ ++ AR R + +G + D
Sbjct: 446 CKKQ--RAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCK 503
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
Y ++ K+G+VD EV M ++ + L+ ++ A A+ +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM--ESNGVTPNSRTCNVIISSLISQG 355
K +K D VV+NALI A ++ VL EM E++ + P+ + ++ + + G
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 356 RTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFS 414
+ +RA EV++ + K + YT+ + + + D A I+KDMK K P FS
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 415 ALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLL 474
ALI+ +A +L++ +GIR +++ L K L+EKI +
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 475 VKEP 478
P
Sbjct: 744 KLRP 747
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 164/370 (44%), Gaps = 40/370 (10%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF 155
T+ +++++ A + + ++ ++ GM + + + ++ A++ KVD F
Sbjct: 466 TMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVF 525
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKD 214
+ M V NL F L+ ++ V KA + ++ + +PD ++ L+ G+
Sbjct: 526 HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQS 585
Query: 215 PNLPKARETFREMVSAG--CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
+ +A + EM + PD +S G ++ C AG+V+ A EV + + T
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
+Y++ V++ + A + +M+ K + D V ++ALI A +L++
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMD 392
+S G+ R+ I +Y+ ++ C +
Sbjct: 706 KSQGI----------------------------RLGTI------SYSSLMGACCNAKDWK 731
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLR 452
A+++++ +KS + P++ T +ALI LC+ KA L+E+ G++P+ +T+ L
Sbjct: 732 KALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSML- 790
Query: 453 QLLIKEKRED 462
+L E+++D
Sbjct: 791 -MLASERKDD 799
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 166/400 (41%), Gaps = 41/400 (10%)
Query: 62 ASPELVENVLK-RFENAGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMW 118
ASP++V++ +E G+ + +AE +R HT + +R+ + +
Sbjct: 247 ASPQVVDDTRALEYEYNGLLQKPLEYSIFAESKREEIHTFYGSNHSSAKSSRLPSLKAVS 306
Query: 119 DIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAF-NGLLSAL 177
VT N L+ + ++ ++ T +V + +NL A NG +S
Sbjct: 307 PAVTSATNSLFLDHKNNGVIDTQFPGQ---SSGQATGDVQE-----ENLVAHSNGGVS-- 356
Query: 178 CKSRNVRKAQEIFDSMKG--RFEPDLKTYSILLEGWGKDPNLPK-ARETFREMVSAGCSP 234
++RK +KG +F D K G D ++P+ F S G SP
Sbjct: 357 ----HIRK------DVKGDWKFPSDGKHV-----GHQIDESMPQFPARNFELHNSNGRSP 401
Query: 235 DVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF 294
+ + L + GR+ + + +++D+D + + IY ++ + + A+
Sbjct: 402 ETSD---AYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHA---SFFKACKKQRAVKEA 455
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
+ + + +N L+ + + R VL+ ++ +G+T + + +ISS
Sbjct: 456 FRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKS 515
Query: 355 GRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
G+ D FEVF +M E + T+ +I ++ A + ++SK P F
Sbjct: 516 GKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVF 575
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKG--IRPSRVTFGKL 451
+ALI+ Q+G +A +L EM + I P ++ G L
Sbjct: 576 NALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGAL 615
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 154/330 (46%), Gaps = 12/330 (3%)
Query: 123 KMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
KM KG+ +N ++++ Y + EA+ F + + +N AL K
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 182 NVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYG 240
V +A E+ MK R PD+ Y+ L++G+ + A + EM+ G SPD+++Y
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
++V L + G +E +E+ + M P + SV++ ++++A D F +E+K
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV-IISSLISQGRTDR 359
+ + + +C+A K + +E P ++ + + SL +G ++
Sbjct: 523 CPENKA----SFVKGYCEAGLSKKAYKAFVRLE----YPLRKSVYIKLFFSLCIEGYLEK 574
Query: 360 AFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
A +V ++M EP MI FC+ N + A ++ M + +P L T++ +I+
Sbjct: 575 AHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIH 634
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
C+ KA L E+M ++GI+P VT+
Sbjct: 635 TYCRLNELQKAESLFEDMKQRGIKPDVVTY 664
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 151/342 (44%), Gaps = 30/342 (8%)
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
+V+R + K+ A M++ ++ A ++ CK+ N+ +A D M G+
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 197 -FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
+ + S++L+ + K +A E F+E D V Y + D L K GRV+EA
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
E++++M D +P Y+ L+ Y ++ ++ DA+D EM G+ D++ YN L+
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDA 375
+ + V + + M++ G PN+ T +VII L + A + F + + C +
Sbjct: 468 LARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENK 527
Query: 376 DTY--------------------------TMMIKMF---CERNEMDMAMKIWKDMKSKRF 406
++ ++ IK+F C ++ A + K M + R
Sbjct: 528 ASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 587
Query: 407 VPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
P +I C+ N +A VL + M+E+G+ P T+
Sbjct: 588 EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 157/335 (46%), Gaps = 28/335 (8%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
Y++++ LAR + + +I +M+ +G N T +++ A KV EA F+ ++
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKT---YSILLEGWGKDPN 216
+ + P+N A+F + C++ +KA + F ++ + +S+ +EG+
Sbjct: 521 Q-KCPENKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGY----- 571
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
L KA + ++M + P G M+ CK V EA + M + +P F Y++
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN-------------KFK 323
++HTY N ++ A F +M+++GIK DVV Y L+ + K + +
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR 691
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMI 382
VL+E + G+ + V+I ++A E+F RMI EPD YT +I
Sbjct: 692 KASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLI 751
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
+ + +DMA+ + ++ K +PS +F A +
Sbjct: 752 SSYFRKGYIDMAVTLVTELSKKYNIPS-ESFEAAV 785
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 12/274 (4%)
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+I+++ + NL +A E + V Y ++ LC G ++AV ++ ++
Sbjct: 218 TYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILEL 271
Query: 263 DDNNCMPTSFIYSVL---VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
D + + +VL V + E +++ A +EME G DV A+I +CK
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR--RMIKICEPDADT 377
L +M G+ N ++I+ A E F+ R + I D
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIF-LDRVC 390
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
Y + + ++ A ++ ++MK + VP + ++ LI+G C G + A L++EMI
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 438 EKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
G+ P +T+ L L + E+ + ++E++
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 34/240 (14%)
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
LL DPNL A R++ G SP+V +Y +V IL G +++ D
Sbjct: 62 LLNSTRDDPNL--ALSFLRQLKEHGVSPNVNAYATLVRILTTWG-----LDIKLD----- 109
Query: 267 CMPTSFIYSVLVHTYGVENR---IEDAIDAFLEMERKGIKADVV--VYNALIGAFCKANK 321
SVLV E R + D I+ E + ++ V+ V AL+ A+
Sbjct: 110 --------SVLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGM 161
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPDADTYT 379
F VL + + + + CN +++ + G+ +F+++ + +C + TY
Sbjct: 162 FDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEY-TYA 220
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
+++K C + ++ A + + + S+ + INGLC G KA L+ E+I++
Sbjct: 221 IVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGETEKAVALILELIDR 274
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 177/384 (46%), Gaps = 37/384 (9%)
Query: 50 TLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEW-AERQRNYAHTVRAYHLMIESL 108
TL +AL Q G + V ++++R E+ G FE+ N+ H ++++L
Sbjct: 212 TLVSALCQLG---KVDEVRDLVRRLEDEG------FEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 109 ARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
+ R+ M KGM +V ++ I++ ++ V+EA+ M K V NL
Sbjct: 263 MQDRE----------MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312
Query: 168 AAFNGLLSALCKSRNVRKAQEIFDS-MKGRFEPDLKTYSILLEGWGKDPNLPKARETFRE 226
+ ++ LCK + +A +F+ + E D Y L++G + NL +A +
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY-GVEN 285
M G P +++Y +++ LC AGRV EA EV K + + YS L+ +Y V+N
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV-----VGDVITYSTLLDSYIKVQN 427
Query: 286 RIEDAIDAFLEMERKGIKA----DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
IDA LE+ R+ ++A D+V+ N L+ AF + + + M +TP++
Sbjct: 428 -----IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T +I G+ + A E+F + K A Y +I C++ +D A ++ ++
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 402 KSKRFVPSLHTFSALINGLCQNGN 425
K +HT L++ + NG
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGG 566
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 6/316 (1%)
Query: 138 VMRKYARAHKVDEAVYTF-NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR 196
V+ + + K + A+ F + +D + NL + L+SALC+ V + +++ ++
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE 236
Query: 197 -FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
FE D YS + G+ K L A REMV G + DVVSY I++D L K G V+EA
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEA 296
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
+ ++ M P Y+ ++ ++E+A F + GI+ D +Y LI
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG 356
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDA 375
C+ +L +ME G+ P+ T N +I+ L GR A EV + ++ D
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV----GDV 412
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
TY+ ++ + + +D ++I + + L + L+ G +A L
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 436 MIEKGIRPSRVTFGKL 451
M E + P T+ +
Sbjct: 473 MPEMDLTPDTATYATM 488
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 17/260 (6%)
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLP-----------KARETFREMVSAG----CSPDVVS 238
+G FE ++ Y I+ G P ++ + + +V+AG S DV+
Sbjct: 599 RGSFEAAIEVYMIMRRK-GLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVID 657
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
Y I+++ LCK G + +A+ + + Y+ L++ + + +A+ F +E
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
G+ V Y LI CK F + ++L M S G+ PN N I+ G+T+
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 359 RAFEVF-RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
A V R+M+ PDA T + MIK +C++ +M+ A+ ++ + K K F LI
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 418 NGLCQNGNAMKACVLLEEMI 437
G C G +A LL EM+
Sbjct: 838 KGFCTKGRMEEARGLLREML 857
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 22/281 (7%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKAR 221
V N +N L++ LC+ + +A +FDS++ P TY IL++ K+ A
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
+ MVS G P+++ Y +VD CK G+ ++A+ VV P +F S ++ Y
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM---ES---- 334
+ +E+A+ F E + K I AD + LI FC + + R +L+EM ES
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKL 865
Query: 335 ----NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMM--IKMFCER 388
+ S + + L QGR +A ++ + P ++ +
Sbjct: 866 INRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDV 925
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
NE +++K K +V H+ + ++ LC +G +A
Sbjct: 926 NE--------EEIKKKDYVHDFHSLHSTVSSLCTSGKLEQA 958
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 186/479 (38%), Gaps = 113/479 (23%)
Query: 86 EWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYAR 144
E E+ N V +Y ++I+ L++ + ++ KM +G+ N+ T+ ++R +
Sbjct: 267 EMVEKGMN--RDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 145 AHKVDEAVYTFNV-----------------------------------MDKYEVPQNLAA 169
K++EA FN M++ + ++
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
+N +++ LC + V +A E+ + G D+ TYS LL+ + K N+ E R +
Sbjct: 385 YNTVINGLCMAGRVSEADEVSKGVVG----DVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
A D+V I++ G EA + + M + + P + Y+ ++ Y +IE+
Sbjct: 441 AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV------------ 337
A++ F E+ + + A V YN +I A CK VL E+ G+
Sbjct: 501 ALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLH 559
Query: 338 -------------------TPNSRTC----NVIISSLISQGRTDRAFEVF----RRMIKI 370
NS C N I L +G + A EV+ R+ + +
Sbjct: 560 SIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTV 619
Query: 371 CEP-------------------------------DADTYTMMIKMFCERNEMDMAMKIWK 399
P D YT++I C+ + A+ +
Sbjct: 620 TFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCS 679
Query: 400 DMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
KS+ + T+++LINGLCQ G ++A L + + G+ PS VT+G L L KE
Sbjct: 680 FAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKE 738
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 13/267 (4%)
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D+ Y+I++ G K+ L KA S G + + ++Y +++ LC+ G + EA+ +
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
+++ +P+ Y +L+ E DA M KG+ ++++YN+++ +CK
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTY 378
+ ++ RV+ VTP++ T + +I +G + A VF K D +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL-----------HTFSALINGLCQNGNAM 427
+IK FC + M+ A + ++M V L + + LC+ G
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVP 893
Query: 428 KACVLLEEMIEKGIRPSRVTFGKLRQL 454
+A +L+E I I PS G ++L
Sbjct: 894 QAIKILDE-ISSTIYPSGKNLGSYQRL 919
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 168/385 (43%), Gaps = 18/385 (4%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVET-FCIVMRKYARAHKVDEAVYTFNVM 158
AY MI+SL R R+ IV M++KG+ T + ++ + A
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPD-LKTYSILLEGWGKDPNL 217
++E + + L+ +LCK + KA+ + + M + D + Y+I L G N
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNP 428
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN-CMPTSFIYSV 276
+ M+ C PD + +++ LCK GRVD+A++V+ DM C P + +
Sbjct: 429 TEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNT 488
Query: 277 LVHTYGVENRIEDAIDAFLE-MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
++ + R E+A+D M IK VV YNA+I K +K V ++E
Sbjct: 489 VMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKA 548
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMA 394
VT +S T +II L + D A + + +I DA Y +K C+ + A
Sbjct: 549 SVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
D+ +P++ ++ +I ++G +A +LEEM + G P VT+
Sbjct: 609 CHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW------ 662
Query: 455 LIKEKREDVLTFLHEKINLLVKEPL 479
+L LH+ ++L V+ L
Sbjct: 663 -------RILDKLHDSMDLTVEREL 680
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
P + +Y +++ LC RV +A ++V DM + +P ++ L+ Y +E A
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM------ESNGVTPNSRTCNVI 347
F EM GI+ + + + LIG F K + R+++KE+ E++ + N +
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFAN-L 278
Query: 348 ISSLISQGRTDRAFEVFRRMIKICEPD--ADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+ S+ +G + FE+ M +CE Y MI C A +I MKSK
Sbjct: 279 VDSMCREGYFNDIFEIAENM-SLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKG 337
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
P +++A+I+GLC++G M+A LLEE E PS T+ L + L KE
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKE 390
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 146/359 (40%), Gaps = 45/359 (12%)
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSI 206
+D F++ ++ +P ++ F L+ C+ R + A ++FD M+ P+ T S+
Sbjct: 179 IDAHKLVFDMRNRGHLP-DVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSV 237
Query: 207 LLEGWGKDPNLPKARETFREMVS-----AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
L+ G+ K ++ R+ +E+ S ++ +VD +C+ G ++ E+ ++
Sbjct: 238 LIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAEN 297
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M + F Y ++ + R A M+ KG+K YNA+I CK
Sbjct: 298 MSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGG 357
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK------------ 369
++L+E P+ T +++ SL + T +A V M++
Sbjct: 358 CMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNI 417
Query: 370 ------------------------ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
C PD T +I C+ +D AMK+ DM + +
Sbjct: 418 YLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGK 477
Query: 406 F-VPSLHTFSALINGLCQNGNAMKAC-VLLEEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
F P T + ++ GL G A +A VL M E I+P V + + + L K + D
Sbjct: 478 FCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGD 536
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 86 EWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARA 145
E A+R R Y +R +M +I+ +V+ ++ + T V+ +
Sbjct: 407 EGADRTRIYNIYLRGLCVMDNPT------EILNVLVSMLQGDCRPDEYTLNTVINGLCKM 460
Query: 146 HKVDEAVYTFNVM--DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDL 201
+VD+A+ + M K+ P + N ++ L +A ++ + + + + +P +
Sbjct: 461 GRVDDAMKVLDDMMTGKFCAP-DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
Y+ ++ G K +A F ++ A + D +Y I++D LC +VD A + D
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ + +F+Y+ + + DA ++ G +VV YN +I ++
Sbjct: 580 VIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGL 639
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVI 347
+ ++L+EM NG P++ T ++
Sbjct: 640 KREAYQILEEMRKNGQAPDAVTWRIL 665
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 154/333 (46%), Gaps = 44/333 (13%)
Query: 62 ASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV 121
SP V+ ++ ++ + A F++A +Q N+ H+ ++ ++I L R R + ++ D++
Sbjct: 49 GSPTRVQKLIAS-QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVL 107
Query: 122 TKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKS 180
K R+ G L E F +++ YA A ++ + TF M ++ N +L L
Sbjct: 108 AKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 167
Query: 181 RN-VRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
R ++KA E+F S + P+ ++Y++L++ + + +L A + F +M+ PDV S
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
Y I++ C+ G+V+ A+E++ DM + +P
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD---------------------------- 259
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
LIG C F ++ L+EM S G +P+ N ++ S G+ +
Sbjct: 260 -----------RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVE 308
Query: 359 RAFEVFRRMIKICEP-DADTYTMMIKMFCERNE 390
A +V ++K E +DT+ M+I + C +E
Sbjct: 309 EACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ-GRTDRAFEVFRR 366
++ LI + +A + V +M TP + N I+ L+S G +AFE+F+
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 367 M-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
+ P+ +Y ++++ FC +++ +A +++ M + VP + ++ LI G C+ G
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKL 451
A LL++M+ KG P R G L
Sbjct: 241 VNGAMELLDDMLNKGFVPDRTLIGGL 266
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 14/262 (5%)
Query: 186 AQEIFD--SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
A+EIFD S + F ++ IL+ G+ + + S+G + ++
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPT----SFIYSVLVHTYGVENRIEDAIDAFLEMER 299
+ +A ++ + M + N P + I VLV G ++ A + F
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY---LQKAFELFKSSRL 183
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
G+ + YN L+ AFC + ++ +M V P+ + ++I +G+ +
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 360 AFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
A E+ M+ K PD +I C++ D K ++M SK F P + L+
Sbjct: 244 AMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 299
Query: 419 GLCQNGNAMKACVLLEEMIEKG 440
G C G +AC ++E +++ G
Sbjct: 300 GFCSFGKVEEACDVVEVVMKNG 321
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 161/391 (41%), Gaps = 34/391 (8%)
Query: 55 LNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQY 114
L+ + + +P+L+ L AG +A F EW + N++HT ++ R + +
Sbjct: 100 LSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDF 159
Query: 115 QIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDK-YEVPQNLAAFNGL 173
+ M +I++K KG+ +T + + RA + + F M+ Y + ++ + +
Sbjct: 160 KGMLEIISKY--KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLV 217
Query: 174 LSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
+ LC+ + A+++ + PD +L+ GW L +A EM G
Sbjct: 218 VKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFE 277
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
+Y +M+D +CK R + ++ +++
Sbjct: 278 IGTKAYNMMLDCVCKLCRKKDPFKLQPEVE----------------------------KV 309
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
LEME +G+ + +N LI CK + + + M G P++ T V+I SL
Sbjct: 310 LLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQ 369
Query: 354 QGRTDRAFEVFRRMIKICEPD---ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL 410
R E+ +M + Y +K+ C ++ AM ++K MK+ P +
Sbjct: 370 AARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGI 429
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
T+ L+ +C N +A L +E +KGI
Sbjct: 430 KTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 130/320 (40%), Gaps = 28/320 (8%)
Query: 30 QEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAE 89
++ + E + K + G TL++A+++ P+ V + FFE E
Sbjct: 157 KDFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTD--------------FFEKME 202
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFC-IVMRKYARAHKV 148
+ L+++ L I +V N+ + E C +++ + A K+
Sbjct: 203 NDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKL 261
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLS---ALCKSRNVRKAQ----EIFDSMKGRFEP-D 200
DEA M + A+N +L LC+ ++ K Q ++ M+ R P +
Sbjct: 262 DEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRN 321
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
+T+++L+ K +A F M GC PD +Y +++ L +A R+ E E++
Sbjct: 322 TETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMID 381
Query: 261 DMDD---NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
M + Y L G+E R+E A+ F M+ G K + Y+ L+G C
Sbjct: 382 KMKSAGYGELLNKKEYYGFLKILCGIE-RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMC 440
Query: 318 KANKFKNVRRVLKEMESNGV 337
N+ + KE G+
Sbjct: 441 ANNQLTRANGLYKEAAKKGI 460
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 183/442 (41%), Gaps = 74/442 (16%)
Query: 86 EWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYAR 144
E A + N A A ++ +L R Y + KM N G + ++ V++ +
Sbjct: 467 EIARKDANLAAVGLA--VVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQ 524
Query: 145 AHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKT 203
+ +++ N++ + + ++ + +++ LCK + A I D+M+ P +
Sbjct: 525 ENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAI 584
Query: 204 YSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD 263
YS ++ GK + +A ETF +M+ +G PD ++Y IM++ + GR+DEA E+V+++
Sbjct: 585 YSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
+ P+SF Y+VL+ + +E +M G+ +VV+Y ALIG F K FK
Sbjct: 645 KHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
Query: 324 NVRRVLKEMESNGVTPN--------------------------------------SRTCN 345
+ M N + + ++
Sbjct: 705 FSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLV 764
Query: 346 VIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
I SSL + G A EV ++ K P+ + +I +C +D A + M+ +
Sbjct: 765 SIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEG 824
Query: 406 FVPSLHT--------------------------------FSALINGLCQNGNAMKACVLL 433
VP+L T +S L+ GLC + A L+
Sbjct: 825 IVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALM 884
Query: 434 EEMIEKGIRPSRVTFGKLRQLL 455
EM + GI P++ ++ KL Q L
Sbjct: 885 LEMQKSGINPNKDSYEKLLQCL 906
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 155/370 (41%), Gaps = 33/370 (8%)
Query: 122 TKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTF-NVMDKYEVPQNLAAFNGLLSALCK 179
++M KG+ NV T+ I++ Y + VD A+ F N ++ +N+ + L+ K
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYK 390
Query: 180 SRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC--SPDV 236
+ KA ++ M PD TY +LL+ K L A + ++ GC +P V
Sbjct: 391 KGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPV 450
Query: 237 ---------------------------VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
V ++ LC A+ ++ M + C P
Sbjct: 451 IDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP 510
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
F Y+ ++ EN IED ++ DV Y ++ CK N ++
Sbjct: 511 LPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCER 388
ME G+ P + II SL QGR A E F +M++ +PD Y +MI +
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARN 630
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+D A ++ +++ PS T++ LI+G + G K C L++M+E G+ P+ V +
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLY 690
Query: 449 GKLRQLLIKE 458
L +K+
Sbjct: 691 TALIGHFLKK 700
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 144/322 (44%), Gaps = 19/322 (5%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK 194
F ++ + + +D+ F+ M K V N+ ++ ++ + CK NV A +F +
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNT 369
Query: 195 GR--FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
G ++ Y+ L+ G+ K + KA + M+ G PD ++Y +++ +L K +
Sbjct: 370 GSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHEL 429
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFL-EMERKGIKADVVVYNA 311
A+ +++ + DN C + L IE +++ L E+ RK V
Sbjct: 430 KYAMVILQSILDNGCGINPPVIDDL-------GNIEVKVESLLGEIARKDANLAAVGLAV 482
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC 371
+ A C + +++M + G TP + N +I L + E ++ I
Sbjct: 483 VTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE----NIIEDLASLVNII 538
Query: 372 E-----PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
+ PD DTY +++ C++N+ D A I M+ P++ +S++I L + G
Sbjct: 539 QELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRV 598
Query: 427 MKACVLLEEMIEKGIRPSRVTF 448
++A +M+E GI+P + +
Sbjct: 599 VEAEETFAKMLESGIQPDEIAY 620
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 168/410 (40%), Gaps = 41/410 (10%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKV 148
++ ++ V Y +++ L + + I+ M G+ V + ++ + +V
Sbjct: 539 QELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRV 598
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSIL 207
EA TF M + + + A+ +++ ++ + +A E+ + + F P TY++L
Sbjct: 599 VEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVL 658
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
+ G+ K + K + +M+ G SP+VV Y ++ K G + + M +N+
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDI 718
Query: 268 MPTSFIYSVLVHTY----------------GVENRIEDAI----------------DAFL 295
Y L+ G E ++ I
Sbjct: 719 KHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSF 778
Query: 296 EME-----RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
ME +K I ++ ++N +I +C A + L+ M+ G+ PN T +++ S
Sbjct: 779 AMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 351 LISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL 410
I G + A ++F CEPD Y+ ++K C+ A+ + +M+ P+
Sbjct: 839 HIEAGDIESAIDLFEG--TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNK 896
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
++ L+ LC + M+A ++++M I P + L +L +EK+
Sbjct: 897 DSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKK 946
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 186 AQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDI 245
A E+ +K P+L ++ ++ G+ L +A M G P++V+Y I++
Sbjct: 779 AMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
+AG ++ A+++ + NC P +YS L+ R DA+ LEM++ GI +
Sbjct: 839 HIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPN 895
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
Y L+ C + +V+K+M + + P S +I L + + A +F
Sbjct: 896 KDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFA 955
Query: 366 RMIK 369
M++
Sbjct: 956 IMVQ 959
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 164/429 (38%), Gaps = 76/429 (17%)
Query: 17 SFARMLSTGEPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFEN 76
+FA+ML +G P E+A + + ++ + + ELVE V+K F
Sbjct: 604 TFAKMLESG-IQPDEIAYM-------------IMINTYARNGRIDEANELVEEVVKHFL- 648
Query: 77 AGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETF 135
R ++ +TV +I ++ + + KM G+ NV +
Sbjct: 649 -------------RPSSFTYTV-----LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLY 690
Query: 136 CIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKS-RNVRKAQEIFDSMK 194
++ + + + F +M + ++ + A+ LLS L ++ +K Q I + K
Sbjct: 691 TALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGK 750
Query: 195 GRFEPDL---KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR 251
+ L K + G + A E + V P++ + ++ C AGR
Sbjct: 751 EKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGR 809
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
+DEA ++ M +P Y++L+ ++ IE AID F E + D V+Y+
Sbjct: 810 LDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---EGTNCEPDQVMYST 866
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC 371
L+ C + + ++ EM+ +G+ PN
Sbjct: 867 LLKGLCDFKRPLDALALMLEMQKSGINPNK------------------------------ 896
Query: 372 EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACV 431
D+Y +++ C A+K+ KDM + P + LI LC+ +A
Sbjct: 897 ----DSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARA 952
Query: 432 LLEEMIEKG 440
L M++ G
Sbjct: 953 LFAIMVQSG 961
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 173 LLSALCKSRNVRKAQEIFDSMKG--RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
L LC ++ +A + D++ G R + Y L + K +A F M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G D V Y ++ CK + A+ + M + + I++ L+H + ++
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCK-ANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
F +M +KG++++V Y+ +IG++CK N +R + S ++ N +I
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 350 SLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
+G D+A ++ RM+ PD TY +++KM + +E+ AM I + +
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSI 439
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 26/348 (7%)
Query: 139 MRKYARAHKVDEAVYTFN-VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM---K 194
+R ++ + +A FN + +P +L N +L + V ++F + +
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 195 GRFEPDLKTYSILLEGWGKDPN--LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
F P T+ ILL + P+ + MV+ G PD V+ I V LC+ GRV
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVH----------TYGVENRIEDAIDAFLEMERKGI 302
DEA +++K++ + + P ++ Y+ L+ Y + + D D +
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD---------V 226
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
K D+V + LI C + + ++ ++ + G P+ N I+ + + A
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 363 VFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
V+++M + EPD TY +I + ++ A K M + P T+++L+NG+C
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHE 469
+ G ++ A LLEEM +G P+ T+ L L K + D L+E
Sbjct: 347 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 159/369 (43%), Gaps = 54/369 (14%)
Query: 65 ELVENVLKRFEN--AGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
+L +++LK N G S F +H RA I ++ R+ +
Sbjct: 106 KLFQHILKSQPNFRPGRSTFLIL--------LSHACRAPDSSISNVHRV---------LN 148
Query: 123 KMRNKGMLNVE-TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
M N G+ + T I +R +VDEA + + P + +N LL LCK +
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 182 NVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
++ E D M+ F D+K PD+VS+ I
Sbjct: 209 DLHVVYEFVDEMRDDF--DVK-------------------------------PDLVSFTI 235
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++D +C + + EA+ +V + + P F+Y+ ++ + ++ +A+ + +M+ +G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
++ D + YN LI KA + + R LK M G P++ T +++ + +G + A
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGAL 355
Query: 362 EVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
+ M + C P+ TY ++ C+ MD M++++ MKS + ++ L+ L
Sbjct: 356 SLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSL 415
Query: 421 CQNGNAMKA 429
++G +A
Sbjct: 416 VKSGKVAEA 424
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFCIVMRKYARAHKVDEAVYTFNVMD 159
Y+ +++ + + + KM+ +G+ + T+ ++ ++A +V+EA M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPNLP 218
+ A + L++ +C+ A + + M+ R P+ TY+ LL G K +
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
K E + M S+G + Y +V L K+G+V EA EV D+ + + YS L
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLE 447
Query: 279 HT 280
T
Sbjct: 448 TT 449
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 189/460 (41%), Gaps = 79/460 (17%)
Query: 51 LDAALNQTGVRASPELVENVLKRFE-NAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLA 109
L+ L V+ + VL+R + N S RFF WA ++ H+ Y + L
Sbjct: 47 LEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILK 106
Query: 110 -RIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLA 168
R + I + I + + + +NV+T IV+ +A+ DEA++ ++ V +
Sbjct: 107 IRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTV 166
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
A+N +++ + +L A +EM
Sbjct: 167 AYN----------------------------------LVIRLFADKGDLNIADMLIKEMD 192
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
G PDV++Y M++ C AG++D+A + K+M ++C+ S YS ++ +E
Sbjct: 193 CVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDME 252
Query: 289 DAIDAFLEMERKG----IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
A++ EME++ I + V Y +I AFC+ + + VL M + G PN T
Sbjct: 253 RALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTA 312
Query: 345 NVIIS------------------------------------SLISQGRTDRAFEVFRRM- 367
V+I SLI R + A ++FR M
Sbjct: 313 CVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLML 372
Query: 368 IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT--FSALINGLCQNGN 425
++ PD + + + C ++++++ K ++ + + L+ GLCQ GN
Sbjct: 373 VRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGN 432
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLT 465
+ +A L + M++K +R K+ + L K ED+++
Sbjct: 433 SWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLMS 472
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 176/417 (42%), Gaps = 69/417 (16%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y ++ ++ +QY + IV+++ G L+ F V+ ++ + +++AV M
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFE--PDLKTYSILLEGWGKD 214
+ + + +N L+ + ++ E+ D M +G + P+++T+++L++ W K
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 215 PNLPKARETFREMVSAGCSPDVVSY----------------------------------- 239
+ +A E ++M G PD V+Y
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 240 --GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID----- 292
GI+V C+ GRV + + V+ M + +++ L++ + VE D ID
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF-VEVMDRDGIDEVTLT 320
Query: 293 ----AFLE-----------------MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
+F E M+ +KADV+ Y+ ++ A+ A + +V KE
Sbjct: 321 LLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 380
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEM 391
M GV P++ +++ + +A E+ +I P+ +T +I +C M
Sbjct: 381 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSM 440
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
D AM+++ M P++ TF L+ G + KA +L+ M G++P TF
Sbjct: 441 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 173 LLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
L++ L + +AQ +F ++ + P L +Y+ LL E+ +G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE--- 288
D + + +++ ++G +++AV+ + M + PT+ Y+ L+ YG+ + E
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+ +D LE + ++ +N L+ A+CK K + V+K+ME GV P++ T N I
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 349 SSLISQGRTDRA-FEVFRRMI--KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+ + +G T RA EV +M+ + +P+ T +++ +C + ++ + MK R
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 406 FVPSLHTFSALINGLCQ 422
+L F++LING +
Sbjct: 291 VEANLVVFNSLINGFVE 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+A+ F+ + G P ++SY ++ + + +V +++ + S ++ ++
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG-- 336
+ + +EDA+ A L+M+ G+ YN LI + A K + +L M G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 337 -VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMA 394
V PN RT NV++ + + + + A+EV ++M + PD TY + + ++ E A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 395 MK--IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ K + ++ P+ T ++ G C+ G + M E + + V F L
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 103/203 (50%), Gaps = 5/203 (2%)
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++++L + GR EA V K + + P+ Y+ L+ V+ + E+E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
K D + +NA+I AF ++ ++ + L +M+ G+ P + T N +I G+ +R+
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 362 EVFRRMIKICE----PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
E+ M++ P+ T+ ++++ +C++ +++ A ++ K M+ P T++ +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 418 NGLCQNGNAMKA-CVLLEEMIEK 439
Q G ++A ++E+M+ K
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMK 253
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 151/355 (42%), Gaps = 37/355 (10%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
TF ++ Y +A ++++A F+ M K VP + FN ++ ++ +A+ + M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 194 KGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
+ + PD KTY+ILL ++ A E +R++ G PD V++ ++ ILC+ V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 253 DEAVEVVKDMDDN----------------------------------NCMPTSFIYSVLV 278
E V+ +MD N +C+ +S + ++
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 279 HTYGVENRIEDAIDAFL-EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
Y + +A F + G + DV+ YN +I A+ KA + + K M++ G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ T N + L D A + M+ C+P TY MI + + A+
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+++ M+ P+ + +LING ++G +A M E G++ + + L
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGRFE-PDLKTYSILLEGWGKDPNLPKARETFREMV 228
+N ++ A K++ KA +F MK + PD TY+ L + + +A+ EM+
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
+GC P +Y M+ + G + +AV++ + M+ P +Y L++ + +E
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+AI F ME G++++ +V +LI A+ K + RRV +M+ + P+ N ++
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 349 SSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
S G A +F + + D ++ M+ ++ +D A+++ ++M+ +
Sbjct: 698 SLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS 757
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEM-IEKGIRPSRVTFGKLRQLLIK 457
+F+ ++ +G + C L EM +E+ + TF L LL K
Sbjct: 758 DCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKK 807
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D+ Y+++++ +GK KA F+ M + G PD +Y + +L VDEA ++
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
+M D+ C P Y+ ++ +Y + DA+D + ME+ G+K + VVY +LI F ++
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE--PDADT 377
+ + + ME +GV N +I + G + A V+ +M K E PD
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM-KDSEGGPDVAA 692
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRF--VPSLHTFSALINGLCQNGNAMKACVLLEE 435
M+ + + + A I+ ++ K V S T L G+ G +A + EE
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGM---GMLDEAIEVAEE 749
Query: 436 MIEKGIRPSRVTFGKL 451
M E G+ +F ++
Sbjct: 750 MRESGLLSDCTSFNQV 765
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 118/256 (46%), Gaps = 5/256 (1%)
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
T++ L++ +GK L A F EM+ +G D V++ M+ G + EA ++K M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
++ P + Y++L+ + IE A++ + ++ + G+ D V + A++ C+
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMI 382
V V+ EM+ N + + + VI+ +++G +A +F R C + T +I
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 383 KMFCERN---EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
++ E+ E + ++M +R + ++ +I + KA L + M +
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQR--NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 440 GIRPSRVTFGKLRQLL 455
G P T+ L Q+L
Sbjct: 545 GTWPDECTYNSLFQML 560
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 158/394 (40%), Gaps = 51/394 (12%)
Query: 18 FARMLSTG-EPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFEN 76
A ML +G +P + A + + ++ + S V L A+ +TGV+ + + +++ F
Sbjct: 573 LAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Query: 77 AGM--SAFRFFEWAERQRNYAHTVRAYHLMIESLARI-----------RQYQIMWD---- 119
+GM A ++F E H V++ H+++ SL + R Y M D
Sbjct: 633 SGMVEEAIQYFRMMEE-----HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 120 ------------------------IVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTF 155
I +R KG +V +F +M Y +DEA+
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM--KGRFEPDLKTYSILLEGWGK 213
M + + + +FN +++ + + E+F M + + D T+ L K
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLL-K 806
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+P + + P + + I + G A+E +++ F
Sbjct: 807 KGGVPSEAVSQLQTAYNEAKP-LATPAITATLFSAMGLYAYALESCQELTSGEIPREHFA 865
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y+ +++TY I+ A+ A++ M+ KG++ D+V L+G + KA + V+RV +
Sbjct: 866 YNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLT 925
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+ P+ + + +S R D A V + M
Sbjct: 926 FGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 56/318 (17%)
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
+ P++ Y+I+L G+ + R + EM G P +YG++VD+ KAG V EA+
Sbjct: 141 YVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEAL 200
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTY---GVENRIE---------------DAID------ 292
+K M P + +V + G +R + D+ID
Sbjct: 201 LWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNG 260
Query: 293 ---------AFLEME------RKGIKADV----------------VVYNALIGAFCKANK 321
FL ME R I+ + +N LI + KA +
Sbjct: 261 SAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGR 320
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTM 380
+ + EM +GV ++ T N +I + + G A + ++M K PD TY +
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
++ + + +++ A++ ++ ++ P T A+++ LCQ + ++ EM
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNS 440
Query: 441 IRPSRVTFGKLRQLLIKE 458
IR + + Q+ + E
Sbjct: 441 IRIDEHSVPVIMQMYVNE 458
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/419 (18%), Positives = 165/419 (39%), Gaps = 30/419 (7%)
Query: 31 EVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAER 90
+ A+L + K + VT + ++ G E++LK+ E G+S
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISP--------- 373
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVD 149
+ Y++++ A + + K+R G+ + T V+ + V
Sbjct: 374 ------DTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDL----KTYS 205
E MD+ + + + ++ V +A+ +F+ RF+ D T +
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE----RFQLDCVLSSTTLA 483
Query: 206 ILLEGWGKDPNLPKARETF---REMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
+++ + + +A F R M +G DV+ Y +M+ KA ++A+ + K M
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNM--SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
+ P Y+ L + +++A EM G K Y A+I ++ +
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMM 381
+ + + ME GV PN +I+ G + A + FR M + + + T +
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 382 IKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
IK + + ++ A +++ MK P + +++++ G +A + + EKG
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 42/366 (11%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
L+ T+ ++ Y ++ ++ EA TF M + + FN ++ + + + +
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSL 355
Query: 190 FDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+MK PD +TY+IL+ K+ ++ +A F+EM G PD VSY ++
Sbjct: 356 MKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA------------------- 290
V+EA ++ +MDD+N + S L Y +E +
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 291 --IDAF------LEMERKGI------KADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
IDA+ E ER I K V+ YN +I A+ + + + + M S G
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRM-----IKICEPDADTYTMMIKMFCERNEM 391
VTP+ T N ++ L S + +M + C P Y +I F + ++
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP----YCAVISSFVKLGQL 591
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+MA +++K+M P + + LIN GN +A +E M E GI + V + L
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 452 RQLLIK 457
+L K
Sbjct: 652 IKLYTK 657
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 154/344 (44%), Gaps = 5/344 (1%)
Query: 118 WDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
W + G ++ E + + Y + EA F + + + +N ++ A
Sbjct: 457 WSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAY 515
Query: 178 CKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
S++ KA E+F+SM PD TY+ L++ K R +M G D
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDC 575
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
+ Y ++ K G+++ A EV K+M + N P +Y VL++ + ++ A+
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM-ESNGVT--PNSRTCNVIISSLIS 353
M+ GI + V+YN+LI + K + +++ +S T P+ T N +I+
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 354 QGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
+ +A +F M + E + T+ MM+ M+ + + A +I K M+ + + ++
Sbjct: 696 RSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
++++ +G +A +EM+ GI+P TF L +L+K
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 8/314 (2%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK 194
+ ++++ Y + ++A F M Y V + +N L+ L + K + + M+
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 195 -GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
+ D Y ++ + K L A E ++EMV PDVV YG++++ G V
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTY---GVENRIEDAIDAFLEMERKGIKADVVVYN 310
+A+ V+ M + S IY+ L+ Y G + E L+ K DV N
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--I 368
+I + + + + + M+ G N T +++ GR + A ++ ++M +
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 369 KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
KI D +Y ++ +F A++ +K+M S P TF +L L + G + K
Sbjct: 747 KIL-TDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKK 805
Query: 429 ACVLLEEMIEKGIR 442
A +EE+ +K I+
Sbjct: 806 AVRKIEEIRKKEIK 819
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 11/288 (3%)
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KG 195
I++++ + E F YE+ N+ +N +L L K+ R Q ++D M +
Sbjct: 159 IILKEQIHWERAVEIFEWFKSKGCYEL--NVIHYNIMLRILGKACKWRYVQSLWDEMIRK 216
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
+P TY L++ + K A +M G PD V+ GI++ + KA +A
Sbjct: 217 GIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKA 276
Query: 256 VEVVKDMD------DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
E K D++ +S+ Y+ ++ TYG +I++A + F M +GI V +
Sbjct: 277 EEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTF 336
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI- 368
N +I + + V ++K M+ + P++RT N++IS +RA F+ M
Sbjct: 337 NTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKD 395
Query: 369 KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+PD +Y ++ F R+ ++ A + +M +T SAL
Sbjct: 396 DGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSAL 443
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 117/244 (47%), Gaps = 8/244 (3%)
Query: 123 KMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
KMR G + + +C V+ + + +++ A + M +Y + ++ + L++A +
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 182 NVRKAQEIFDSMKGRFEP-DLKTYSILLEGWGKDPNLPKARETFREMVSAGCS----PDV 236
NV++A ++MK P + Y+ L++ + K L +A +R+++ + C+ PDV
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDV 683
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
+ M+++ + V +A E + D F +++++ Y R E+A +
Sbjct: 684 YTSNCMINLYSERSMVRKA-EAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M I D + YN+++G F +FK KEM S+G+ P+ T + + L+ G
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 357 TDRA 360
+ +A
Sbjct: 803 SKKA 806
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVD 149
+ N V Y ++I + A Q V M+ G+ N + +++ Y + +D
Sbjct: 603 EYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLD 662
Query: 150 EAVYTFNVM----DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYS 205
EA + + +K + P ++ N +++ + VRKA+ IFDSMK R E + T++
Sbjct: 663 EAEAIYRKLLQSCNKTQYP-DVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFA 721
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
++L + K+ +A + ++M D +SY ++ + GR EAVE K+M +
Sbjct: 722 MMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSS 781
Query: 266 NCMPTSFIYSVL 277
P + L
Sbjct: 782 GIQPDDSTFKSL 793
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 136/304 (44%), Gaps = 38/304 (12%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDL 201
Y RA+ +D ++ TF +++YE+P+ + + N LL A +++ ++A ++ M +
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY---- 176
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
G PD+ +Y M+ +LC++G + +V +
Sbjct: 177 -----------------------------GIEPDLETYNRMIRVLCESGSTSSSYSIVAE 207
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M+ PT+ + +++ + E + ++ M+ G+ V YN +I CK K
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC---EPDADTY 378
+ ++ + S + PNS T +++I S+ D A +F M +C +PD++ Y
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM--VCNGYKPDSECY 325
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
+I C+ + + A+ + ++ K +VPS L+NGL +A L+ + E
Sbjct: 326 FTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKE 385
Query: 439 KGIR 442
K R
Sbjct: 386 KFTR 389
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 2/195 (1%)
Query: 98 VRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFN 156
+ Y+ MI L + IV +M K + +F +++ + + K DE
Sbjct: 182 LETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR 241
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS-MKGRFEPDLKTYSILLEGWGKDP 215
+MD++ V +A +N ++ LCK + +A+ + D M R P+ TYS+L+ G+ +
Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
NL +A F MV G PD Y ++ LCK G + A+ + ++ + N +P+ +
Sbjct: 302 NLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMK 361
Query: 276 VLVHTYGVENRIEDA 290
LV+ +++++A
Sbjct: 362 WLVNGLASRSKVDEA 376
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 192 SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC-KAG 250
S+ + D +S+ + ++ + + + P S+ + IL +A
Sbjct: 66 SLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRAN 125
Query: 251 RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMER-KGIKADVVVY 309
+D +++ ++++ T + L+ + ++A +LEM + GI+ D+ Y
Sbjct: 126 MLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETY 185
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
N +I C++ + ++ EME + P + + ++I + + D +V R M +
Sbjct: 186 NRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDE 245
Query: 370 I-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
TY +MI+ C+R + A + + S R P+ T+S LI+G C N +
Sbjct: 246 FGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDE 305
Query: 429 ACVLLEEMIEKGIRPSRVTFGKLRQLLIK 457
A L E M+ G +P + L L K
Sbjct: 306 AMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 7/241 (2%)
Query: 229 SAGCSPDV----VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV-LVHTYGV 283
S SPD + + + V L + +++ N P S ++V + YG
Sbjct: 64 STSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGR 123
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM-ESNGVTPNSR 342
N ++ +I F +E+ I V NAL+ A A +K RV EM + G+ P+
Sbjct: 124 ANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLE 183
Query: 343 TCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
T N +I L G T ++ + M K +P A ++ +MI F + + D K+ + M
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 402 KSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
+ T++ +I LC+ + +A L++ ++ +RP+ VT+ L E+
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 462 D 462
D
Sbjct: 304 D 304
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 167/390 (42%), Gaps = 17/390 (4%)
Query: 55 LNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRN---YAHTVRAYHLMIESLARI 111
L + + S V VLK + A FF W + Y H+ Y+ + LAR
Sbjct: 217 LQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARP 276
Query: 112 RQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAF 170
W +V +M+ G ++++T+ V R++ ++ + E V + M ++
Sbjct: 277 NSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDC 336
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYS-ILLEGWGKD----PNLPKARETFR 225
+ LL L S N ++ + ++E K+ S + +G + +A E +
Sbjct: 337 SLLLRYLSGSPN--PDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITK 394
Query: 226 EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
M +AG PD ++Y +V LCKA R++EA V+ M+ C P +++L+ + N
Sbjct: 395 AMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNN 454
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG-VTPNSRTC 344
++ A+ F M KG D + + LI F NKF+ L EM N V P T
Sbjct: 455 ELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTY 514
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKICEPD-ADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
++I L+ +++ A ++ + M K P A+ + + F + K + D+ S
Sbjct: 515 KLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLED----AKKFLDVLS 570
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLL 433
+ PS + +I + G A LL
Sbjct: 571 SKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 29/408 (7%)
Query: 51 LDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLAR 110
++ L + + + E VL++ E A+ F +W R + + Y +M+ L +
Sbjct: 76 VEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQ 135
Query: 111 IRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAA 169
R + W + +M+ G L+ +T+ + + ++ +AV + ++ ++
Sbjct: 136 QRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMSV 195
Query: 170 FNGLLSALCKSRNV-----RKAQE----IFDSMKGRFEPDLKTYSILLEGWGKDPNLPKA 220
G +SA+ + R+ QE + D+ R +L+ + + KA
Sbjct: 196 VAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPL------------KA 243
Query: 221 RETFR----EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
F S+G V+Y + +L + V E VV +M Y
Sbjct: 244 LAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIK 303
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK--FKNVRRVLKEMES 334
+ + + + + + M K + + L+ + V RV ++ ES
Sbjct: 304 VSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYES 363
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDM 393
G + + + I SL S GR D A E+ + M EPD TY+ ++ C+ ++
Sbjct: 364 TGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEE 423
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
A + M+++ P + T++ LI G C+N KA M+EKG
Sbjct: 424 ARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 164/391 (41%), Gaps = 54/391 (13%)
Query: 74 FENAGMS-----AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQI-MWDIVTKMRNK 127
FE G S F W ++QR Y Y +I + + Q ++ MW + ++M+N
Sbjct: 104 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMW-LFSEMKNS 162
Query: 128 GMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQ 187
G C + D +VY N L++A +R+ KA
Sbjct: 163 G-------C----------RPDASVY-----------------NALITAHLHTRDKAKAL 188
Query: 188 E----IFDSMKG--RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
E D MKG R +P++ TY+ILL + + + + F+++ + SPDV ++
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++D K G + E V+ M N C P ++VL+ +YG + E F + R
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
K + +N++I + KA V K+M P+ T +I G RA
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 362 EVFRRMIKICEPD----ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI 417
E+F ++ E D A T M++++C A K++ + + R P T+ L
Sbjct: 369 EIFE---EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 418 NGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ + +L+++M + GI P++ F
Sbjct: 426 KAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 173 LLSALCKSRNVRKAQEIFDSMKGR--FEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
L L KS + E+F M+ + + PD YS L+ GK A F EM ++
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN-----NCMPTSFIYSVLVHTYGVEN 285
GC PD Y ++ +A+E V+ D C P Y++L+ +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+++ F +++ + DV +N ++ A+ K K + VL M SN P+ T N
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 346 VIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
V+I S + ++ + F+ +++ E P T+ MI + + +D A ++K M
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 405 RFVPSLHTFSALI--NGLCQNGNAMKACVLLEEMIE 438
++PS T+ +I G C G+ +A + EE+ E
Sbjct: 343 NYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGE 376
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 38/216 (17%)
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNC-MPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
++ + L K+ + + +EV + M +P + +YS L+ G + + A+ F EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 300 KGIKADVVVYNALIGAFC----KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
G + D VYNALI A KA + VR L +M+
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKG--------------------- 200
Query: 356 RTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
I+ C+P+ TY ++++ F + ++D ++KD+ P ++TF+
Sbjct: 201 ------------IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+++ +NG + +L M +P +TF L
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVL 284
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 176/377 (46%), Gaps = 7/377 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMR-NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
AY MI R+R Y +++ M+ ++ L +E + +++ Y++ K++ A M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNL 217
+ N+ A+N L++ K + AQ +F + EPD +Y ++EGWG+ N
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+A+ ++E+ G P+ + ++++ K G D A++ ++DM C +S I ++
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSS-ILGII 459
Query: 278 VHTYGVENRIEDAIDAFLEME-RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
+ Y +I D + L+ I+ + +++L+ A+ K + +L+E +
Sbjct: 460 LQAYEKVGKI-DVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRD 518
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVF-RRMIKICEPDADTYTMMIKMFCERNEMDMAM 395
S +++I S G+ A +++ +M E + + MI ++ E A
Sbjct: 519 SAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAE 578
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE-KGIRPSRVTFGKLRQL 454
K++ ++KS V FS ++ + G+ +AC +LE M E K I P F + ++
Sbjct: 579 KLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRI 638
Query: 455 LIKEKREDVLTFLHEKI 471
K +D L L+ +I
Sbjct: 639 YQKCDLQDKLQHLYYRI 655
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 12/242 (4%)
Query: 110 RIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAA 169
RIR+ I W N E + V+ ARA +DE TF M +Y N
Sbjct: 654 RIRKSGIHW------------NQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVT 701
Query: 170 FNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS 229
FN LL K++ +K E+F K D+ +Y+ ++ +GK+ + + M
Sbjct: 702 FNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQF 761
Query: 230 AGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIED 289
G S + +Y ++D K ++++ ++K M + P + Y+++++ YG + I++
Sbjct: 762 DGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDE 821
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
D E++ G+ D+ YN LI A+ + ++KEM + P+ T +++
Sbjct: 822 VADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Query: 350 SL 351
+L
Sbjct: 882 AL 883
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 162/367 (44%), Gaps = 5/367 (1%)
Query: 89 ERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT-KMRNKGMLNVETFCIVMRKYARAHK 147
++ R+ A YHL+I S Q I KM + +N+ ++ Y +
Sbjct: 514 KKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGE 573
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDLKTYS 205
EA + + V + F+ ++ K+ ++ +A + + M + + PD+ +
Sbjct: 574 FSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFR 633
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
+L + K K + + + +G + Y +++ +A +DE ++M
Sbjct: 634 DMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRY 693
Query: 266 NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
P + ++VL+ YG + + FL +R G+ DV+ YN +I A+ K + N+
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNM 752
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKM 384
+K M+ +G + + N ++ + + ++ + +RM K PD TY +MI +
Sbjct: 753 SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+ E+ +D + K++K P L +++ LI G +A L++EM + I P
Sbjct: 813 YGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Query: 445 RVTFGKL 451
+VT+ L
Sbjct: 873 KVTYTNL 879
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMD-KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
F IV+R Y +A ++EA +MD + ++ ++ F +L K K Q ++ +
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRI 655
Query: 194 -KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG-- 250
K + + Y+ ++ + L + TF EM+ G +P+ V++ +++D+ KA
Sbjct: 656 RKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLF 715
Query: 251 -RVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
+V+E + K + + Y+ ++ YG + A M+ G + Y
Sbjct: 716 KKVNELFLLAK----RHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAY 771
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
N L+ A+ K + + R +LK M+ + P+ T N++I+ QG D +V + + +
Sbjct: 772 NTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKE 831
Query: 370 I-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
PD +Y +IK + ++ A+ + K+M+ + +P T++ L+ L +N ++
Sbjct: 832 SGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLE 891
Query: 429 ACVLLEEMIEKGI 441
A M + GI
Sbjct: 892 AIKWSLWMKQMGI 904
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
++++++ + + ++ + ++ + G+++V ++ ++ Y + M
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 760
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE-PDLKTYSILLEGWGKDPNLP 218
+L A+N LL A K + + K + I MK PD TY+I++ +G+ +
Sbjct: 761 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 820
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+ + +E+ +G PD+ SY ++ G V+EAV +VK+M N +P Y+ LV
Sbjct: 821 EVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLV 880
Query: 279 HTYGVENRIEDAIDAFLEMERKGI 302
+ +AI L M++ GI
Sbjct: 881 TALRRNDEFLEAIKWSLWMKQMGI 904
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 138/305 (45%), Gaps = 11/305 (3%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIFDSMKG--RFEPDLKTYSILLEGWGKDPNLPKARET 223
N A++ +L L + +A+++ + G F+ + ++ ++ K N+ A +
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG- 282
F M+ G P+V + G+++ + K V+EA M + S YS ++ Y
Sbjct: 233 FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTR 291
Query: 283 --VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
+ ++ E+ ID M++ ++ + + ++ A+ + K + +L ME+ G +PN
Sbjct: 292 LRLYDKAEEVIDL---MKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPN 348
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWK 399
N +I+ + + A +F R+ I EPD +Y MI+ + + + A ++
Sbjct: 349 IIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQ 408
Query: 400 DMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
++K + P+ LIN + G+ A +E+M G + S + G + Q K
Sbjct: 409 ELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVG 467
Query: 460 REDVL 464
+ DV+
Sbjct: 468 KIDVV 472
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 12/336 (3%)
Query: 139 MRKYARAHKVDEAVYTFN-VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI-FDSMKGR 196
+R++ + H FN V K P +N + +L R + +E+ + +K
Sbjct: 163 LREWQKTHTF------FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDG 216
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
E D TYS ++ + KA E F M G PD V+Y ++D+ K+G+V+E +
Sbjct: 217 VELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVL 276
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ + P + +SVL +G + EM+ +K +VVVYN L+ A
Sbjct: 277 SLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAM 336
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR-AFEVFRRMIKICEP-D 374
+A K R + EM G+TPN +T ++ + + R R A +++ M P D
Sbjct: 337 GRAGKPGLARSLFNEMLEAGLTPNEKTLTALV-KIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 375 ADTYTMMIKMFCERNEMDMAMKIWKDMK-SKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
Y ++ M + + A +++ DMK S + P +++A++N G A KA L
Sbjct: 396 FILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELF 455
Query: 434 EEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHE 469
EEM++ G++ + + L Q L K KR D + ++ +
Sbjct: 456 EEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 145/307 (47%), Gaps = 7/307 (2%)
Query: 66 LVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMR 125
LV N L+ ++ FF W + + + Y++ ++SL RQ+Q++ ++ +M
Sbjct: 158 LVLNSLREWQKT----HTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMV 213
Query: 126 NKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
G+ L+ T+ ++ R + ++A+ F M K + + ++ +L KS V
Sbjct: 214 KDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVE 273
Query: 185 KAQEIFD-SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
+ +++ ++ ++PD +S+L + +G+ + R +EM S P+VV Y ++
Sbjct: 274 EVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLL 333
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
+ + +AG+ A + +M + P + LV YG DA+ + EM+ K
Sbjct: 334 EAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWP 393
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEM-ESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
D ++YN L+ + R+ +M ES P++ + +++ S G+ ++A E
Sbjct: 394 MDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAME 453
Query: 363 VFRRMIK 369
+F M+K
Sbjct: 454 LFEEMLK 460
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM- 193
F ++ + + A D Y M +V N+ +N LL A+ ++ A+ +F+ M
Sbjct: 294 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
+ P+ KT + L++ +GK A + + EM + D + Y ++++ G +
Sbjct: 354 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 413
Query: 254 EAVEVVKDMDDN-NCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
EA + DM ++ C P +F Y+ +++ YG + E A++ F EM + G++ +V+ L
Sbjct: 414 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 473
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
+ KA + +V V GV P+ R C ++S
Sbjct: 474 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLS 510
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV + ++ RA K A FN M + + N L+ K+R R A +++
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384
Query: 191 DSMKGRFEP-DLKTYSILLEGWGKDPNLPKARETFREMV-SAGCSPDVVSYGIMVDILCK 248
+ MK + P D Y+ LL +A F +M S C PD SY M++I
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
G+ ++A+E+ ++M + LV G RI+D + F ++G+K D +
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRL 504
Query: 309 YNALIG--AFCKANK 321
L+ A C++++
Sbjct: 505 CGCLLSVMALCESSE 519
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 189/454 (41%), Gaps = 53/454 (11%)
Query: 8 RKKLLCKFVSFARMLSTGEPPPQEVADLTETV-CKVMMSSPGV-TLDAALNQTGVRASPE 65
R ++ C +S R L+ E +E L ++ ++ P V TLD +
Sbjct: 43 RTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFL 102
Query: 66 LVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQI-MWDIVTKM 124
L E + K + + F W ++QR Y Y +I + + Q ++ MW + ++M
Sbjct: 103 LFEELGK--SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMW-LFSEM 159
Query: 125 RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
+N G C + D +VY N L++A +R+
Sbjct: 160 KNSG-------C----------RPDASVY-----------------NALITAHLHTRDKA 185
Query: 185 KAQE----IFDSMKG--RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
KA E D MKG R +P++ TY+ILL + + + + F+++ + SPDV +
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
+ ++D K G + E V+ M N C P ++VL+ +YG + E F +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
R K + +N++I + KA V K+M P+ T +I G
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 359 RAFEVFRRMIKICEPD----ADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFS 414
RA E+F ++ E D A T M++++C A K++ + + R P T+
Sbjct: 366 RAREIFE---EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 415 ALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
L + + +L+++M + GI P++ F
Sbjct: 423 FLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 38/216 (17%)
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNC-MPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
++ + L K+ + + +EV + M +P + +YS L+ G + + A+ F EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 300 KGIKADVVVYNALIGAFC----KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
G + D VYNALI A KA + VR L +M+
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKG--------------------- 200
Query: 356 RTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
I+ C+P+ TY ++++ F + ++D ++KD+ P ++TF+
Sbjct: 201 ------------IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 416 LINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+++ +NG + +L M +P +TF L
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVL 284
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDLKTYSILLEGWGK 213
F VM + + + A +N ++ LCK+ +A IF ++ +PD++TY++++ +
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----R 57
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+L +A + + EM+ G PD ++Y M+ LCK ++ +A +V K
Sbjct: 58 FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCST--------- 108
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
++ L++ Y R++D ++ F EM R+GI A+V+ Y LI F + F + +EM
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRA 360
SNGV +S T I+ L S+ +A
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKA 195
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
Y++++H + ++A + F + G++ DV YN +I + + ++ EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDM 393
G+ P++ T N +I L Q + +A R++ K C T+ +I +C+ +
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQA----RKVSKSCS----TFNTLINGYCKATRVKD 124
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
M ++ +M + V ++ T++ LI+G Q G+ A + +EM+ G+ S +TF +
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILP 184
Query: 454 LLI--KEKREDVLTFLHE 469
L KE R+ V L +
Sbjct: 185 QLCSRKELRKAVAMLLQK 202
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 143/324 (44%), Gaps = 20/324 (6%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKA----QEIF 190
F ++++ + ++D AV + + ++ N L++ + + R +E+F
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 191 D----------SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS-AGCSPDVVSY 239
M G+ +P+ T++ ++ + ++ +REM GCSP+V SY
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMER 299
++++ C G + EA +V ++M + Y+ ++ + A + F +M
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL 344
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
KGI+ + Y L+ +CKA + V +EM+ G + T ++ L R
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQR 404
Query: 360 AFE---VFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFS 414
E + + ++ + P + Y +++K CE +MD A+ I +M K F PS T+
Sbjct: 405 VVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYR 464
Query: 415 ALINGLCQNGNAMKACVLLEEMIE 438
A I+G G+ + +L EM E
Sbjct: 465 AFIDGYGIVGDEETSALLAIEMAE 488
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVK--------DMDD--------------NNCMP 269
CS D S ++ IL ++ A E+++ D D+ N C
Sbjct: 101 CSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGS 160
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK----ANKFKNV 325
F++ +L+ + I+ A+ ++ +GI A + NALI + +N +K
Sbjct: 161 APFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMY 220
Query: 326 RRVL----------KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK--ICEP 373
R V K+M + PN+ T N ++ S +G T+ ++R M + C P
Sbjct: 221 REVFGLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSP 279
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
+ +Y ++++ +C R M A K+W++MK + V + ++ +I GLC N +KA L
Sbjct: 280 NVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF 339
Query: 434 EEMIEKGIRPSRVTFGKL 451
+M KGI + +T+ L
Sbjct: 340 RDMGLKGIECTCLTYEHL 357
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV ++ ++M Y + EA + M V ++ A+N ++ LC + V KA+E+F
Sbjct: 280 NVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF 339
Query: 191 DSM--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC- 247
M KG E TY L+ G+ K ++ +REM G D ++ +V+ LC
Sbjct: 340 RDMGLKG-IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCD 398
Query: 248 --KAGRVDEAVEVVKD-MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
RV EA ++VKD + + P+ Y +LV + +++ A++ EM KG K
Sbjct: 399 DRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKP 458
Query: 305 DVVVYNALIGAF 316
Y A I +
Sbjct: 459 SQETYRAFIDGY 470
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 171/400 (42%), Gaps = 55/400 (13%)
Query: 70 VLKRFENAGMSA---FRFFEWAERQRNYAHTVRAYHLMIESLA----RIRQYQIMWDIVT 122
V++ FE+ G+S RF +WA + T ++ ++A R+ Y +WD+V
Sbjct: 160 VVRVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYG-LWDLVK 218
Query: 123 KMRNK---GMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCK 179
++ K G+LN+E ++ + + K A F+V K E
Sbjct: 219 EIGEKESCGVLNLEILNELIALFGKLGKSKAA---FDVFSKTE----------------- 258
Query: 180 SRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSY 239
+ F P+ KTY + LE K + A +M+ +G +
Sbjct: 259 --------------EFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQM 304
Query: 240 GIMVDILCKAGRVDEAVEVVK-DMDDNNCMPTSFIYSVLVHTYGVENRIEDAI----DAF 294
G ++ CK G+ +EA V + +P F+ +++ + I A D
Sbjct: 305 GNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLS 364
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ 354
E R+GIK ++ +I + C+ K+ + +L +M S G P + N+++ +
Sbjct: 365 GEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKT 420
Query: 355 GRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF 413
G D A EV + M + +PD TYT++I + + MD A +I + K K S T+
Sbjct: 421 GDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTY 480
Query: 414 SALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
ALI G C+ +A LL EM G++P+ + KL Q
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQ 520
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 10/294 (3%)
Query: 65 ELVENVLKRFENAGMS--AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
E++ ++ F G S AF F E + + + Y+L +E+L + +
Sbjct: 232 EILNELIALFGKLGKSKAAFDVFSKTE-EFGFTPNAKTYYLTLEALCKRSFMDWACSVCE 290
Query: 123 KMRNKGMLN-VETFCIVMRKYARAHKVDEA--VYTFNVMDKYEVPQNLAAFNGLLSALCK 179
KM G+L+ E ++ + + K +EA VY + +P A L++ALCK
Sbjct: 291 KMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCK 348
Query: 180 SRN-VRKAQEIFDSMKGRFEP-DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
+ + AQE+ + G +K +S ++ + N+ A+ +M+S G +P
Sbjct: 349 NDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 408
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
+ ++V K G +DEA EV+K M+ P + Y+V++ Y +++A + E
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSL 351
++K K V Y+ALI +CK ++ ++L EM+ GV PN+ N +I S
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 170 FNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
F+ ++ +LC+ RNV+ A+ + D + P +++++ K +L +A+E + M
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
S G PDV +Y +++ K G +DEA E++ + + + Y L+ Y +
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFC-KANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
+A+ EM+R G++ + YN LI +FC KA ++ + +EM+ G+ N+ + +I
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 554
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 145/295 (49%), Gaps = 32/295 (10%)
Query: 162 EVPQ-NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKA 220
E+P+ + ++N +LS ++ N KAQ FD M + D +++ ++ G+ + + KA
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK---DAASWNTMITGYARRGEMEKA 174
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI--YSVLV 278
RE F M+ + VS+ M+ + G +++A K P + ++ ++
Sbjct: 175 RELFYSMME----KNEVSWNAMISGYIECGDLEKASHFFK------VAPVRGVVAWTAMI 224
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
Y ++E A F +M + ++V +NA+I + + ++ ++ ++ + M G+
Sbjct: 225 TGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEP-----DADTYTMMIKMFCERNEMDM 393
PNS +SS + A ++ R++ +I D T +I M+C+ E+
Sbjct: 282 PNSSG----LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
A K+++ MK K V ++A+I+G Q+GNA KA L EMI+ IRP +TF
Sbjct: 338 AWKLFEVMKKKDVV----AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 141/333 (42%), Gaps = 35/333 (10%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
+++ MI AR + + ++ M K N ++ ++ Y +++A + F V
Sbjct: 157 SWNTMITGYARRGEMEKARELFYSMMEK---NEVSWNAMISGYIECGDLEKASHFFKV-- 211
Query: 160 KYEVP-QNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLP 218
P + + A+ +++ K++ V A+ +F M +L T++ ++ G+ ++
Sbjct: 212 ---APVRGVVAWTAMITGYMKAKKVELAEAMFKDMT--VNKNLVTWNAMISGYVENSRPE 266
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDIL-------CKAGRVDEAVEVVKDMDDNNCMPTS 271
+ FR M+ G P+ S G+ +L + GR + + ++ TS
Sbjct: 267 DGLKLFRAMLEEGIRPN--SSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
L+ Y + DA F M++K DVV +NA+I + + + +E
Sbjct: 325 -----LISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFRE 375
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERN 389
M N + P+ T ++ + G + F M++ EP D YT M+ +
Sbjct: 376 MIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAG 435
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+++ A+K+ ++S F P F L+ G C+
Sbjct: 436 KLEEALKL---IRSMPFRPHAAVFGTLL-GACR 464
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 94/222 (42%), Gaps = 49/222 (22%)
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDP 215
++ K + ++ A L+S CK + A ++F+ MK + D+ ++ ++ G+ +
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK---DVVAWNAMISGYAQHG 364
Query: 216 NLPKARETFREMVSAGCSPDVVS------------------------------------Y 239
N KA FREM+ PD ++ Y
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI---EDAIDAFLE 296
MVD+L +AG+++EA+++++ M P + ++ L+ V + E A + L+
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMP---FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+ + + Y L + N++++V RV K M+ + V
Sbjct: 482 LNSQ----NAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 11/319 (3%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVMD 159
Y I L +++ + +++ + + E F I +M Y + + A F+ M
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF--EPDLKTYSILLEGWGKDPNL 217
+ + + +FN LLSA S+ + +A + F + + PDL TY+ +++ + ++
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
F E+ G PD++S+ +++ + E + M N P Y+
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
V + DA++ M+ +GI DV YNALI A+ N + V + EM+ G+
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIK---ICEPDADTYTMMIKMFCERNEMDMA 394
TP++ T ++I L +G DRA EV IK + P+ Y +++ ++D A
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEA 387
Query: 395 MKIWKDMKSK---RFVPSL 410
++ K+ K + R++P L
Sbjct: 388 TQLVKNGKLQSYFRYLPDL 406
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 40/264 (15%)
Query: 186 AQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA-GCSPDVVSYGIMV 243
A ++FD M E +K+++ LL + L +A +TF+E+ G +PD+V+Y M+
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
LC+ G +D D + F E+E+ G +
Sbjct: 201 KALCRKGSMD-----------------------------------DILSIFEELEKNGFE 225
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
D++ +N L+ F + F R+ M+S ++PN R+ N + L + A +
Sbjct: 226 PDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNL 285
Query: 364 FRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
M + PD TY +I + N ++ MK + +MK K P T+ LI LC+
Sbjct: 286 IDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCK 345
Query: 423 NGNAMKACVLLEEMIEKGI--RPS 444
G+ +A + EE I+ + RP+
Sbjct: 346 KGDLDRAVEVSEEAIKHKLLSRPN 369
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM-ERKGIKADVV 307
+G + A ++ +M + NC T ++ L+ Y ++++A+ F E+ E+ GI D+V
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS-----LISQGRTDRAFE 362
YN +I A C+ ++ + +E+E NG P+ + N ++ L +G DR ++
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG--DRIWD 252
Query: 363 VFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+ + K P+ +Y ++ + A+ + MK++ P +HT++ALI
Sbjct: 253 LMKS--KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 423 NGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE 458
+ N + EM EKG+ P VT+ L LL K+
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKK 346
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 248 KAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
K +DE ++ K DD F+ +++ YG E A F EM + V
Sbjct: 102 KFSTIDEVLQYQKKFDD--IKSEDFVIRIML-LYGYSGMAEHAHKLFDEMPELNCERTVK 158
Query: 308 VYNALIGAFCKANKFKNVRRVLKEM-ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
+NAL+ A+ + K + KE+ E G+TP+ T N +I +L +G D +F
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 367 MIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGN 425
+ K EPD ++ +++ F R +IW MKSK P++ ++++ + GL +N
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 426 AMKACVLLEEMIEKGIRPSRVTFGKL 451
A L++ M +GI P T+ L
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNAL 304
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 145/323 (44%), Gaps = 4/323 (1%)
Query: 133 ETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS 192
+T+ + + + D+A F VM + + + L+S KS + KA +
Sbjct: 145 KTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEY 204
Query: 193 MKGRFE--PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAG 250
MK + PD+ T+++L+ K + EM G V+Y ++D KAG
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAG 264
Query: 251 RVDEAVEVVKDM-DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
+E V+ DM +D + +P + ++ +YG + + + G++ D+ +
Sbjct: 265 MFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTF 324
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-I 368
N LI +F KA +K + V+ ME + + T N++I + GR ++ +VFR+M
Sbjct: 325 NILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKY 384
Query: 369 KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMK 428
+ +P++ TY ++ + + + + + + + V F+ +IN Q G+
Sbjct: 385 QGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLAT 444
Query: 429 ACVLLEEMIEKGIRPSRVTFGKL 451
L +M E+ +P ++TF +
Sbjct: 445 MKELYIQMEERKCKPDKITFATM 467
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 159/383 (41%), Gaps = 42/383 (10%)
Query: 61 RASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDI 120
+A E ++ +K EN SA + F +Q Y + Y + + L +Q +
Sbjct: 109 KAVLEALDEAIK--ENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLL 166
Query: 121 VTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKY-EVPQNLAAFNGLLSALC 178
M ++G+ ++ + ++ Y ++ +D+A T M + ++ F L+S C
Sbjct: 167 FEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCC 226
Query: 179 KSRNVRKAQEIFDSMK---------------------GRFE----------------PDL 201
K + I M G FE PD+
Sbjct: 227 KLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDV 286
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
T + ++ +G N+ K + G PD+ ++ I++ KAG + V+
Sbjct: 287 CTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDF 346
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M+ T+ Y++++ T+G RIE D F +M+ +G+K + + Y +L+ A+ KA
Sbjct: 347 MEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGL 406
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTM 380
+ VL+++ ++ V ++ N II++ G E++ +M + C+PD T+
Sbjct: 407 VVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFAT 466
Query: 381 MIKMFCERNEMDMAMKIWKDMKS 403
MIK + D ++ K M S
Sbjct: 467 MIKTYTAHGIFDAVQELEKQMIS 489
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 152/339 (44%), Gaps = 11/339 (3%)
Query: 122 TKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNV---MDKYEVPQNLAAFNGLLSALC 178
T+ N G+++ ++ +R + D AV +KY A L A+
Sbjct: 61 TEKMNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIK 120
Query: 179 KSRNVRKAQEIFDSMKGR--FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
++R + A +IF+ ++ + +EP KTY+ L + G +A F M+S G P +
Sbjct: 121 ENR-WQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTI 179
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDD-NNCMPTSFIYSVLVHTYGVENRIEDAIDAFL 295
Y ++ + K+ +D+A ++ M ++C P F ++VL+ R + L
Sbjct: 180 DVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVL 239
Query: 296 EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT-PNSRTCNVIISSLISQ 354
EM G+ V YN +I + KA F+ + VL +M +G + P+ T N II S
Sbjct: 240 EMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY-GN 298
Query: 355 GRTDRAFEVFRRMIKI--CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
GR R E + ++ +PD T+ ++I F + + M+ + F + T
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 413 FSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
++ +I + G K + +M +G++P+ +T+ L
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSL 397
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 9/305 (2%)
Query: 144 RAHKVDEAVYTFNVMDK---YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEP 199
+ ++ A+ FN++ K YE + L L + +A +F+ M +P
Sbjct: 120 KENRWQSALKIFNLLRKQHWYE--PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKP 177
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVS-AGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
+ Y+ L+ +GK L KA T M S + C PDV ++ +++ CK GR D +
Sbjct: 178 TIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI 237
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK-ADVVVYNALIGAFC 317
V +M ++ Y+ ++ YG E+ +M G DV N++IG++
Sbjct: 238 VLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 297
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDAD 376
+ + + GV P+ T N++I S G + V M K
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
TY ++I+ F + ++ +++ MK + P+ T+ +L+N + G +K +L ++
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 437 IEKGI 441
+ +
Sbjct: 418 VNSDV 422
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKG--MLNVETFCIVMRKYARAHKVDEAVYTFNV 157
Y+ +I+ + ++ M ++ M G + +V T ++ Y + + ++
Sbjct: 252 TYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSR 311
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGKDPN 216
V ++ FN L+ + K+ +K + D M+ RF TY+I++E +GK
Sbjct: 312 FQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR 371
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ K + FR+M G P+ ++Y +V+ KAG V + V++ + +++ + + ++
Sbjct: 372 IEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
+++ YG + + +++ME + K D + + +I + F V+ + K+M S+
Sbjct: 432 IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSD 491
Query: 337 V 337
+
Sbjct: 492 I 492
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/347 (19%), Positives = 153/347 (44%), Gaps = 35/347 (10%)
Query: 85 FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYA 143
F+ A + + Y + L ++ + +I+ + + ++ E F ++ Y
Sbjct: 61 FKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYG 120
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKT 203
+A + A F M + +++ +FN LLSA S+ +E+F+ + G+
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL------ 174
Query: 204 YSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD 263
PD+VSY ++ LC+ + EAV ++ +++
Sbjct: 175 ---------------------------SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIE 207
Query: 264 DNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFK 323
+ P ++ L+ + ++ + E + + +M K + D+ YNA + K K
Sbjct: 208 NKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSK 267
Query: 324 NVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMI 382
+ + E++++G+ P+ + N +I I++G+ D A ++ ++K PD T+ +++
Sbjct: 268 ELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLL 327
Query: 383 KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
C+ + + A++++K+ SKR++ T L++ L + +A
Sbjct: 328 PAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 55/305 (18%)
Query: 221 RETFREMVSAGCSPDVVS-YGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVH 279
++ +R+M G + ++S YG KAG + A +V ++M + +C + ++ L+
Sbjct: 100 QKKYRDMSKEGFAARIISLYG-------KAGMFENAQKVFEEMPNRDCKRSVLSFNALLS 152
Query: 280 TYGVENRIEDAIDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
Y + + + + F E+ K IK D+V YN LI A C+ + +L E+E+ G+
Sbjct: 153 AYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLK 212
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKI---------------------------- 370
P+ T N ++ S +G+ + E++ +M++
Sbjct: 213 PDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNL 272
Query: 371 --------CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+PD ++ MI+ +MD A +K++ + P TF+ L+ +C+
Sbjct: 273 FGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCK 332
Query: 423 NGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIK----EKREDVLT------FLHEKIN 472
G+ A L +E K + T +L L+K E+ E+++ FL K+N
Sbjct: 333 AGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFLKLKLN 392
Query: 473 LLVKE 477
L +E
Sbjct: 393 LPSQE 397
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 37/242 (15%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVM-DKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
+V +F ++ Y + K D FN + K + ++ ++N L+ ALC+ ++ +A +
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 190 FDSMKGR-FEPDLKTYSILL-------------EGWGKD-------------------PN 216
D ++ + +PD+ T++ LL E W K N
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLAN 262
Query: 217 LPKARET---FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
K++E F E+ ++G PDV S+ M+ G++DEA K++ + P
Sbjct: 263 EAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKAT 322
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
+++L+ E AI+ F E K L+ K +K + ++K +
Sbjct: 323 FALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAK 382
Query: 334 SN 335
+N
Sbjct: 383 TN 384
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 157/341 (46%), Gaps = 13/341 (3%)
Query: 103 LMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVM---- 158
L++ SL + + + I+ ++RN ++ + + R A A V +Y V+
Sbjct: 228 LILHSLCKCSREMDAFYILEELRN---IDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKK 284
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGK-DPN 216
K V + + + L ++ + +A+E+ + + G+F D L+ DP+
Sbjct: 285 RKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPD 344
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
A E MVS G P + + + LC+ + D ++ + + YS+
Sbjct: 345 --SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSL 402
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
++ R+ ++ A EM+++G+ DV +YNALI A CKA + +++ EM G
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAM 395
N T NV+I L +G + + +F +M+ + EPD Y +I+ C+ +++ AM
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 396 KIWKD-MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEE 435
++++ M+ + S + LC NG++ +A LL E
Sbjct: 523 EVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 175/444 (39%), Gaps = 80/444 (18%)
Query: 51 LDAALNQTGVRAS--PELVENVLKRFE-NAGMSAFRFFEWAERQRNYAHTVRAYHLMIES 107
++ +L+ G R S P LV V+ F N A FF WA +Q Y+H +YH + +S
Sbjct: 32 IEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKS 91
Query: 108 LARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNL 167
L+ RQ+ M + ++++ +L +D +VY
Sbjct: 92 LSLSRQFSAMDALFKQVKSNKIL-----------------LDSSVY-------------- 120
Query: 168 AAFNGLLSALCKSRNVRKA----QEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARET 223
L+ L R + A +E F S PD+ LL G D A++
Sbjct: 121 ---RSLIDTLVLGRKAQSAFWVLEEAF-STGQEIHPDVCNR--LLAGLTSDGCYDYAQKL 174
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC-MPTSFIYSVLVHTYG 282
F +M G S + + +G+ + C++ ++ + +V ++ N + S I +++H+
Sbjct: 175 FVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLC 234
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
+R DA E+ K D + Y + AF + VLK+ GV P S
Sbjct: 235 KCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSS 294
Query: 343 TCNVIISSLISQGRTDRAFEVFRRM------------------IKICEPDAD-------- 376
I LIS R A EV + + +PD+
Sbjct: 295 DYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMV 354
Query: 377 ---------TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM 427
T + + K C ++ D +K ++ + SK + L ++S +I+ LC+ G
Sbjct: 355 STGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVR 414
Query: 428 KACVLLEEMIEKGIRPSRVTFGKL 451
++ L+EM ++G+ P + L
Sbjct: 415 ESYTALQEMKKEGLAPDVSLYNAL 438
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 155/351 (44%), Gaps = 5/351 (1%)
Query: 114 YQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNG 172
Y + KMR+KG+ LN F + + + R+ + ++ + + + K + N +
Sbjct: 168 YDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL 227
Query: 173 L-LSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
L L +LCK A I + ++ +PD Y ++ E + NL + + ++
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G +P Y + L A R+ EA EV + + + I L+ + + + A
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDP-DSA 346
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
++ + M G + + L C+ +K ++ + + + S G ++ +++IS
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISF 406
Query: 351 LISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
L GR ++ + M K PD Y +I+ C+ + A K+W +M + +
Sbjct: 407 LCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMN 466
Query: 410 LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
L T++ LI L + G A ++ L ++M+E+GI P + L + L KE +
Sbjct: 467 LTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETK 517
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 38/309 (12%)
Query: 192 SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREM-VSAGCS-PDVVSYGIMVDILCKA 249
S + ++P Y++++ +G+ + E R + + C + Y +M A
Sbjct: 86 SKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLA 145
Query: 250 GRVDEAVEVVKDMDDNNCMPTS----FIYSVLVHT---------------YGVE------ 284
GR++ A+E++ M D C P+S FI ++LV GVE
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 285 ----------NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
+E A+ E ++ + +V+ ++ LI FC KF+ ++L+ ME
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDM 393
+ P++ T N++IS L +GR + ++ RM +K CEP+ TY ++ ++
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 394 AMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQ 453
A ++ M S PS ++ ++ GLC+ + ++ +L +M+ G P + + K+ Q
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 454 LLIKEKRED 462
++ + +D
Sbjct: 386 CVVSKNNDD 394
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 140/330 (42%), Gaps = 41/330 (12%)
Query: 70 VLKRFENAGMSAFRF--FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV--TKMR 125
VLK F+N +F ++ ++++Y T Y LMI + + Y + +++ K+
Sbjct: 65 VLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLE 124
Query: 126 NKGMLNVETFCIVMRKYAR-AHKVDEAV---------------YTFNVM----------- 158
+ + E F +MR Y A +++ A+ +FN +
Sbjct: 125 KRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFD 184
Query: 159 ---------DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILL 208
K V + N L+ LC+S N+ A ++ D + + P++ T+S L+
Sbjct: 185 EIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLI 244
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G+ +A + M PD +++ I++ L K GRV+E +++++ M C
Sbjct: 245 RGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCE 304
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y +++ + R +A + +M G++ + Y ++ C+ + V
Sbjct: 305 PNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWV 364
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTD 358
L++M ++G P + ++ ++S+ D
Sbjct: 365 LRQMVNHGFVPKTLMWWKVVQCVVSKNNDD 394
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 5/214 (2%)
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFL---EMERKGIKADVVVYNALIGAFCKANKFKNV 325
PT +Y+++++ +G + ++ D I+ + ++E++ ++ YN + A +
Sbjct: 93 PTESLYALMINKFG-QAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRA 151
Query: 326 RRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKM 384
+L M G P+S++ N I++ L+S D ++F K+ E DA ++IK
Sbjct: 152 IEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKG 211
Query: 385 FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
CE ++ A+++ + ++ P++ TFS LI G C G +A LLE M ++ I P
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 445 RVTFGKLRQLLIKEKREDVLTFLHEKINLLVKEP 478
+TF L L K+ R + L E++ + EP
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEP 305
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 15/284 (5%)
Query: 61 RASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDI 120
R +PE + + + E+ + F F WA +Q + H +YH+ I L + YQ M DI
Sbjct: 136 RFTPEELADAITLEEDPFL-CFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDI 194
Query: 121 VTKMRN-KGMLNVETFCIVMRKYARAHKVDEAVYTFNVM---DKYEVPQNLAAFNGLLSA 176
V ++ + + + N + ++ + +A K+ AV F M E + ++ L A
Sbjct: 195 VNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKA 254
Query: 177 LCKSRNVRKAQEIF-DSMKGRF--------EPDLKTYSILLEGWGKDPNLPKARETFREM 227
L N ++ ++++ F EPD+ + L++G+ ++ A F +M
Sbjct: 255 LLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQM 314
Query: 228 -VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR 286
V C P+ +Y ++ LC GR A E++ +M +P Y+ LV+ + +
Sbjct: 315 SVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGE 374
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
I+DA+ EM G D + Y L+ C+ K+ R+L+
Sbjct: 375 IDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 25/276 (9%)
Query: 182 NVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV---- 237
NV K E + RF P+ +I LE +DP L F A P
Sbjct: 122 NVSKFHETISKLPPRFTPEELADAITLE---EDPFL-----CFHLFNWASQQPRFTHENC 173
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
SY I + L A E ++V + + +Y+ ++ + ++ A++ F M
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 298 E-------RKGIKADVVVYNALIG----AFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
R I+ +++ AL+G ++ + VR + ++M +G+ P+ N
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 347 IISSLISQGRTDRAFEVFRRMIKI--CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
++ + + A +F +M + CEP++ TY +I C + A ++ +MK K
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK 353
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
FVP+ ++++L+N +G A L EMIE G
Sbjct: 354 GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 6/249 (2%)
Query: 197 FEPDLKTYSILLEGW---GKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVD 253
F PD + Y+ L++G+ G+ + + E R PD V+Y +V AG +D
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 254 EAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM-ERKGIKADVVVYNAL 312
A +V+ +M Y+VL+ Y + +I+ A D EM E GI+ DVV YN +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE 372
I + EM + G+ P + ++ + G+ A VF M+
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 373 PDAD--TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
D + M+++ +C ++ A ++ MK F P++ T+ +L NG+ Q A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 431 VLLEEMIEK 439
+L +E+ E+
Sbjct: 650 LLWKEIKER 658
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 17/246 (6%)
Query: 212 GKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA---VEVVKDMDDNNCM 268
G+ P LPK +PD Y ++ K GRV + +E ++ DD N
Sbjct: 401 GEPPLLPKV-----------FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSH 449
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P Y+ +V + ++ A EM R G+ A+ + YN L+ +CK + +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 329 LKEM-ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFC 386
L+EM E G+ P+ + N+II I + A F M + P +YT ++K F
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 387 ERNEMDMAMKIWKD-MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
+ +A +++ + M R L ++ L+ G C+ G A ++ M E G P+
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 446 VTFGKL 451
T+G L
Sbjct: 630 ATYGSL 635
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 135 FCIVMRKYARAHKVDEAVYTFNVM----DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+ +M+ Y + +V + M D+ P + + ++SA + + +A+++
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVT-YTTVVSAFVNAGLMDRARQVL 475
Query: 191 DSMKGRFEPDLK-TYSILLEGWGKDPNLPKARETFREMV-SAGCSPDVVSYGIMVDILCK 248
M P + TY++LL+G+ K + +A + REM AG PDVVSY I++D
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL 535
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM-ERKGIKADVV 307
A+ +M PT Y+ L+ + + + + A F EM +K D++
Sbjct: 536 IDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLI 595
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
+N L+ +C+ ++ +RV+ M+ NG PN T + + +SQ R
Sbjct: 596 AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG-VSQAR 643
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 155/409 (37%), Gaps = 66/409 (16%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGML---NVETFCIVMRKYARAHKVDEAVYTFN 156
+Y ESL R + I+T++RN+ L + + ++ A++ + AV
Sbjct: 124 SYQSKPESLTRAQS------ILTRLRNERQLHRLDANSLGLLAMAAAKSGQTLYAVSVIK 177
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRN-------------VRKAQEIFD-SMKGRFEPDLK 202
M + ++ A+ +++L S + R+ + D S+ G+ PD
Sbjct: 178 SMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRFGDQSLVGQSRPDTA 237
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
++ +L + K + F EM C PDV++Y +M+ + + GR + V V++ +
Sbjct: 238 AFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERI 297
Query: 263 DDNN---CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA--------------- 304
D CM T +G E + A E R K
Sbjct: 298 IDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEE 357
Query: 305 -----DVVVYNALIGAFCKANKF--KNVRRVLKEMESNGV-------------TPNSRTC 344
+ + + ++ + V V K++ N V P+SR
Sbjct: 358 EAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIY 417
Query: 345 NVIISSLISQGR---TDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
++ + GR T R E RR + PD TYT ++ F MD A ++ +
Sbjct: 418 TTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAE 477
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK-GIRPSRVTF 448
M + T++ L+ G C+ +A LL EM E GI P V++
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSY 526
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 158/350 (45%), Gaps = 13/350 (3%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N ET +RK +R KV A+ F+ M + N A N LS L ++ +++KA +F
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF 165
Query: 191 DSMKGRFEPDLKTYSILL----EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDIL 246
+ M+ + TYS++L E G + L RE RE C DVV Y + +
Sbjct: 166 EFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCF-DVVLYNTAISLC 224
Query: 247 CKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
+ V E + + M + + T YS+LV + R E A+D + EM I
Sbjct: 225 GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRE 284
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR 366
A+I A K K+ ++ + M G+ PN CN +I+SL G+ F+V+
Sbjct: 285 DAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 344
Query: 367 MIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTF---SALINGLCQ 422
+ + +PD T+ ++ + N + ++++ DM + L+ + +A+++ CQ
Sbjct: 345 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLF-DMIRSENLCCLNEYLYNTAMVS--CQ 401
Query: 423 N-GNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKI 471
G KA LL EM G+ S ++ + K ++ V ++E +
Sbjct: 402 KLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHM 451
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 144/347 (41%), Gaps = 11/347 (3%)
Query: 80 SAFRFFEWAERQ--RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE-TFC 136
SA R F ER+ R V Y+ I RI I M+ G + E T+
Sbjct: 194 SALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYS 253
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KG 195
+++ + R + + A+ ++ M ++ A ++SA K A +IF SM K
Sbjct: 254 LLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKK 313
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
+P+L + L+ GK + + + + S G PD ++ ++ L KA R ++
Sbjct: 314 GMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDV 373
Query: 256 VEVVKDM--DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
+++ DM +N C ++Y+ + + E A+ EME G+ YN +I
Sbjct: 374 LQLF-DMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVI 432
Query: 314 GAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEP 373
A K+ K K V + M PN+ T ++ S I D ++ +++ EP
Sbjct: 433 SACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKV----EP 488
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
D Y I C R E A +++ M+ P T + ++ L
Sbjct: 489 DVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 144/347 (41%), Gaps = 39/347 (11%)
Query: 94 YAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYARAHKVDEAV 152
+ + Y + LA ++++ + +I+ + ++ E F ++ Y R + A
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQ 126
Query: 153 YTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWG 212
F+ M + + +FN LL+A S+ + IF + G+
Sbjct: 127 KVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL--------------- 171
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
PDV SY ++ LC G EAV ++ ++++ P
Sbjct: 172 ------------------SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHI 213
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
+++L+H + + E+ + M K +K D+ YNA + NK + + + ++
Sbjct: 214 TFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL 273
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEM 391
+ N + P+ T +I +S+G+ D A ++ + K C P + ++ C+ ++
Sbjct: 274 KGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDL 333
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
+ A ++ K++ +KR + +++ L + +A EE++E
Sbjct: 334 ESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA----EEIVE 376
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 234 PDVVSYGIMVDILCKAGRV---DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
P++ G + I+ GRV + A +V +M + NC T+ ++ L++ + +
Sbjct: 101 PNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLV 160
Query: 291 IDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
F E+ K I+ DV YN LI C F ++ E+E+ G+ P+ T N+++
Sbjct: 161 EGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLH 220
Query: 350 SLISQGRTDRAFEVFRRMIKI------------------------------------CEP 373
++G+ + +++ RM++ +P
Sbjct: 221 ESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP 280
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
D T+T MIK F ++D A+ +K+++ P F++L+ +C+ G+ A L
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELC 340
Query: 434 EEMIEKGIRPSRVTFGKLRQLLIKEKRED 462
+E+ K + ++ L+K ++D
Sbjct: 341 KEIFAKRLLVDEAVLQEVVDALVKGSKQD 369
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 91 QRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML--NVETFCIVMRKYARAHKV 148
+RN T +++ ++ + +++ ++ I ++ K + +V ++ +++
Sbjct: 134 ERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSF 193
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSIL 207
EAV + ++ + + FN LL + ++I+ M + + D+++Y+
Sbjct: 194 TEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNAR 253
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC 267
L G + + F ++ PDV ++ M+ G++DEA+ K+++ N C
Sbjct: 254 LLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGC 313
Query: 268 MPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRR 327
P F+++ L+ +E A + E+ K + D V ++ A K +K
Sbjct: 314 RPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEE 373
Query: 328 VLKEMESN 335
+++ ++N
Sbjct: 374 IVELAKTN 381
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAF 361
+ ++ VY + A KF+ V +L+E II+ G + A
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQ 126
Query: 362 EVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFV-PSLHTFSALING 419
+VF M + C+ A ++ ++ + D+ I+K++ K + P + +++ LI G
Sbjct: 127 KVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKG 186
Query: 420 LCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
LC G+ +A L++E+ KG++P +TF L
Sbjct: 187 LCGKGSFTEAVALIDEIENKGLKPDHITFNIL 218
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 29/185 (15%)
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+ L++G + + A+E F+EMVS G PD+++Y I++D LCK G++++A+
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKAL------ 71
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
V ++ED D F + KG+K +VV Y +I FCK
Sbjct: 72 --------------------VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK 111
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE--PDADTYTM 380
+ + ++M+ +G P+S T N +I + + G + E+ + M + C DA TY +
Sbjct: 112 EEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGL 170
Query: 381 MIKMF 385
+ M
Sbjct: 171 VTDML 175
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
++ F EM ++G+ + V Y LI +A + + KEM S+GV P+ T N+++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 351 LISQGRTDRA---------FEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
L G+ ++A +++F + +K +P+ TYT MI FC++ + A +++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
MK +P T++ LI ++G+ + L++EM T+G + +L
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
E FREM G + V+Y ++ L +AG D A E+ K
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK--------------------- 40
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK---------ANKFKNVRRVLKEM 332
EM G+ D++ YN L+ CK A K ++ + +
Sbjct: 41 --------------EMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSL 86
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEM 391
GV PN T +IS +G + A+ +FR+M + PD+ TY +I+ +
Sbjct: 87 SLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDK 146
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
+ ++ K+M+S RF T+ L+ + +G K
Sbjct: 147 AASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 183
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 143/344 (41%), Gaps = 48/344 (13%)
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLE 209
AV F M + + ++ A ++ NV A ++D + ++ D T+S L+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMP 269
+G N + EM + G P++V Y ++D + +A R +A + KD+ N P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 270 TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
Y+ LV YG +DA+ + EM+ KG+ V++YN L+ + C N++
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRY------- 400
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKICEPDADTYTMMIKMFCE 387
D AFE+F+ M + C+PD+ T++ +I ++
Sbjct: 401 ---------------------------VDEAFEIFQDMKNCETCDPDSWTFSSLITVYAC 433
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ A M+ F P+L +++I + ++++E GI P
Sbjct: 434 SGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRF 493
Query: 448 FGKLRQLLIKEKREDVLTF----------LHEKINLLVKEPLCD 481
G L ++ + E++ L + + +LV+E C+
Sbjct: 494 CGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCE 537
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 140/318 (44%), Gaps = 38/318 (11%)
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGR--FEPDLKTYSILLEGWGKDPNLPKARETFRE 226
+F + L + R R+ ++ F MK + + P + Y+I+L +G+ + A ETF E
Sbjct: 154 SFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLE 213
Query: 227 MVSAGCSPDVVSYGIMVDILCKAGR----------VDE---------------------- 254
M+ GC PD V+ G M+ + GR V E
Sbjct: 214 MLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSF 273
Query: 255 ---AVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNA 311
+++ +M + P F Y+++V +Y + E+A+ AF EM+ G + V Y++
Sbjct: 274 HGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSS 333
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC 371
+I KA ++ + ++M S G+ P++ TC ++S +A +F M +
Sbjct: 334 VISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNK 393
Query: 372 EP-DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
P D ++I+++ + A ++++ + + T+ A+ +GN +KA
Sbjct: 394 IPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKAL 453
Query: 431 VLLEEMIEKGIRPSRVTF 448
++E M + I SR +
Sbjct: 454 DVIEMMKTRDIPLSRFAY 471
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 156/338 (46%), Gaps = 4/338 (1%)
Query: 84 FFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMR-KY 142
FF W + Q +Y +V Y +++ ++ + ++ + +M G C M Y
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTY 233
Query: 143 ARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDL 201
AR + + + + + + + + +N +LS+L K K +++ M + P+
Sbjct: 234 ARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNE 293
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
TY++++ + K +A + F EM S G P+ V+Y ++ + KAG ++A+ + +D
Sbjct: 294 FTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
M +P+++ + ++ Y A+ F +MER I AD V+ +I + K
Sbjct: 354 MRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGL 413
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD-TYTM 380
F + + + +E E + + +T + ++ G +A +V M P + Y +
Sbjct: 414 FHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIV 473
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
M++ + + +D A + ++ + SK +P + + ++N
Sbjct: 474 MLQCYAKIQNVDCAEEAFRAL-SKTGLPDASSCNDMLN 510
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
P+ +Y++++ YG +I+ A + FLEM G + D V ++ + + + +
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCE 387
K ++ + ++ N ++SSL + + +++ M++ P+ TYT+++ + +
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 388 RNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT 447
+ + A+K + +MKS FVP T+S++I+ + G+ KA L E+M +GI PS T
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYT 365
Query: 448 FGKLRQLLIK 457
+ L K
Sbjct: 366 CATMLSLYYK 375
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 151/349 (43%), Gaps = 8/349 (2%)
Query: 100 AYHLMIESLAR---IRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFN 156
A + +I S R + + +++ DI+ ++ + + ET ++ Y R HK+ EA +
Sbjct: 637 AVNRVISSFVREGDVSKAEMIADIIIRLGLR--MEEETIATLIAVYGRQHKLKEAKRLYL 694
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDP 215
+ + P + ++ A + + A +F +S + +P T SIL+
Sbjct: 695 AAGESKTPGK-SVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRG 753
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
+A R + D V Y ++ + +AG++ A E+ + M + + Y+
Sbjct: 754 KHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYN 813
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
++ YG +++ AI+ F R G+ D +Y +I + K K + EM+
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKK 873
Query: 336 GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMA 394
G+ P + + N+++ + E+ + M + D TY +I+++ E ++ A
Sbjct: 874 GIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEA 933
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRP 443
K +K K S FS+L++ L + G +A +M E GI P
Sbjct: 934 EKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISP 982
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
L+ + +++ A K+ A + M VP ++ +N ++S + + KA EI
Sbjct: 772 LDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEI 831
Query: 190 F-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
F ++ + D K Y+ ++ +GK + +A F EM G P SY +MV I C
Sbjct: 832 FSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI-CA 890
Query: 249 AGRVDEAV-EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
R+ V E+++ M+ N Y L+ Y ++ +A ++ KGI
Sbjct: 891 TSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHS 950
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+++L+ A KA + R +M G++P+S I+ ++ G ++ + +M
Sbjct: 951 HFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Query: 368 IK 369
I+
Sbjct: 1011 IR 1012
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 133/307 (43%), Gaps = 12/307 (3%)
Query: 150 EAVYTFNVMDKYEVPQNLA-----AFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTY 204
E+++ N DK+E N++ A +L+ K N+ + + I + M F+ DL +
Sbjct: 580 ESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLM---FKTDLGSS 636
Query: 205 SI--LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
++ ++ + ++ ++ KA ++ G + + ++ + + ++ EA +
Sbjct: 637 AVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAA 696
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
++ S I S ++ Y +EDA F+E KG V + L+ A K
Sbjct: 697 GESKTPGKSVIRS-MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKH 755
Query: 323 KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEP-DADTYTMM 381
+ + + + ++ N +I +++ G+ A E++ RM P TY M
Sbjct: 756 REAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTM 815
Query: 382 IKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGI 441
I ++ ++D A++I+ + + ++ +I + G +A L EM +KGI
Sbjct: 816 ISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGI 875
Query: 442 RPSRVTF 448
+P ++
Sbjct: 876 KPGTPSY 882
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 2/275 (0%)
Query: 173 LLSALCKSRNVRKAQEIFDS-MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
L++AL R+A+ I + ++ E D Y+ L++ + L A E + M ++G
Sbjct: 745 LVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSG 804
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAI 291
+ +Y M+ + + ++D+A+E+ + + IY+ ++ YG ++ +A+
Sbjct: 805 VPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEAL 864
Query: 292 DAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSL 351
F EM++KGIK YN ++ + V +L+ ME NG + T +I
Sbjct: 865 SLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Query: 352 ISQGRTDRAFEVFRRMIKICEPDADTYTMMIKM-FCERNEMDMAMKIWKDMKSKRFVPSL 410
+ A + + + P + ++ + + M+ A + + M P
Sbjct: 925 AESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDS 984
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
++ G G+A K + E+MI + R
Sbjct: 985 ACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDR 1019
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 149/362 (41%), Gaps = 54/362 (14%)
Query: 126 NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRK 185
N L+V +++ + ++E N+M K ++ +A N ++S+ + +V K
Sbjct: 596 NVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGS--SAVNRVISSFVREGDVSK 653
Query: 186 AQEIFD---SMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS--PDVVSYG 240
A+ I D + R E + T + L+ +G+ L +A+ + ++AG S P
Sbjct: 654 AEMIADIIIRLGLRMEEE--TIATLIAVYGRQHKLKEAKRLY---LAAGESKTPGKSVIR 708
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
M+D + G +++A + + + C P + S+LV+ + +A K
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
I+ D V YN LI A +A K + + + M ++GV + +T N +IS + D+A
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 361 FEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALI-- 417
E+F + D YT MI + + +M A+ ++ +M+ K P +++ ++
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 418 -------------------NGLC-----------------QNGNAMKACVLLEEMIEKGI 441
NG C Q A K L++E KGI
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE---KGI 945
Query: 442 RP 443
Sbjct: 946 PL 947
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 7/295 (2%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG-RFEPDLKTYSILLEGWGKDPNLPKAR 221
VP N + ++S+ K +A + F MK F P+ TYS ++ K + KA
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 222 ETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY 281
+ +M S G P + M+ + K +A+ + DM+ N I +++ Y
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY 408
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
G DA F E ER + AD Y A+ + V++ M++ + P S
Sbjct: 409 GKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDI-PLS 467
Query: 342 RTCNVIISSLISQ-GRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKD 400
R +++ ++ D A E FR + K PDA + M+ ++ N + A K
Sbjct: 468 RFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQ 527
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+ + + + + C+ G +A +++I K R +RV + Q L
Sbjct: 528 IMVDQVHFDIELYKTAMRVYCKEGMVAEA----QDLIVKMGREARVKDNRFVQTL 578
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 4/232 (1%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDEAVYTF 155
+++ Y+ MI R Q +I + R G+ L+ + + ++ Y + K+ EA+ F
Sbjct: 808 SIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK--GRFEPDLKTYSILLEGWGK 213
+ M K + ++N ++ SR + E+ +M+ GR DL TY L++ + +
Sbjct: 868 SEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRC-TDLSTYLTLIQVYAE 926
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+A +T + G + ++ L KAG ++EA M + P S
Sbjct: 927 SSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSAC 986
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNV 325
++ Y E I + +M R ++ D V + + + K ++V
Sbjct: 987 KRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQDV 1038
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 18/337 (5%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N+ T+ ++ Y+R ++ E F +M K V + F +L +V + I
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 191 DS-MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+K L+ + +L + K L A + FR M DV+++ ++ C+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQN 260
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G+ +EAVE+VK+M+ P +++L+ Y + + A+D +ME GI ADV +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS-----LISQGRTDRAFEVF 364
A+I + ++M GV PN+ T +S+ +I+QG + V
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 365 RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
I D ++ M+ + +++ A K++ +K+K ++T++++I G CQ G
Sbjct: 381 MGFID----DVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAG 432
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKRE 461
KA L M + +RP+ +T+ + IK E
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 46/318 (14%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGR 196
++ YA+ ++D A F M + +V A+N +L A C++ +A E+ M K
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK-------- 248
P L T++IL+ G+ + A + ++M + G + DV ++ M+ L
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 249 --------AGRVDEAVEVVKDMDDNNCMPT--------------SFIYSVLVHT-----Y 281
AG V AV ++ + +C+ FI VLV Y
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
++EDA F ++ K DV +N++I +C+A + M+ + PN
Sbjct: 398 SKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIWK 399
T N +IS I G A ++F+RM K + + T+ ++I + + + D A+++++
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 400 DMKSKRFVPSLHTFSALI 417
M+ RF+P+ T +L+
Sbjct: 514 KMQFSRFMPNSVTILSLL 531
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 136/311 (43%), Gaps = 47/311 (15%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRFEPD 200
Y++ K+++A F+ + +V +N +++ C++ KA E+F M+ P+
Sbjct: 397 YSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAG-CSPDVVSYGIMVDILCKAGRVDEAVEVV 259
+ T++ ++ G+ K+ + +A + F+ M G + ++ +++ + G+ DEA+E+
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
Query: 260 KDMDDNNCMPTSF--------------------------------IYSV---LVHTYGVE 284
+ M + MP S I++V L TY
Sbjct: 513 RKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKS 572
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
IE + FL ME K D++ +N+LIG + + + +M++ G+TPN T
Sbjct: 573 GDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTL 628
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKICE--PDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+ II + G D +VF + P + + M+ ++ N ++ A++ ++M
Sbjct: 629 SSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMN 688
Query: 403 SKRFVPSLHTF 413
+ P +F
Sbjct: 689 IQSETPIWESF 699
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 157/372 (42%), Gaps = 47/372 (12%)
Query: 119 DIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
++V +M +G+ + T+ I++ Y + K D A+ M+ + + ++ + ++S L
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 178 CKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDV 236
+ +A ++F M P+ T + + + E V G DV
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 237 VSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLE 296
+ +VD+ K G++++A +V + + + + ++ ++ Y A + F
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFTR 443
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG-VTPNSRTCNVIISSLISQG 355
M+ ++ +++ +N +I + K + + ME +G V N+ T N+II+ I G
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 356 RTDRAFEVFRRM-IKICEPDADTYTMMI---------KM--------------------- 384
+ D A E+FR+M P++ T ++ KM
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 385 -----FCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
+ + +++ + I+ M++K + T+++LI G +G+ A L +M +
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETKDII----TWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 440 GIRPSRVTFGKL 451
GI P+R T +
Sbjct: 620 GITPNRGTLSSI 631
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
N L+ K + A+++FDS+K + D+ T++ ++ G+ + KA E F M A
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNK---DVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMD-DNNCMPTSFIYSVLVHTYGVENRIED 289
P+++++ M+ K G EA+++ + M+ D + +++++ Y + ++
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 290 AIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS 349
A++ F +M+ + V +L+ A K VR + + + N +
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD 567
Query: 350 SLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPS 409
+ G + + +F M D T+ +I + A+ ++ MK++ P+
Sbjct: 568 TYAKSGDIEYSRTIFLGMET---KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
Query: 410 LHTFSALI--NGLCQN 423
T S++I +GL N
Sbjct: 625 RGTLSSIILAHGLMGN 640
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 153/324 (47%), Gaps = 18/324 (5%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
++ T+ ++ YA +A+ M + + ++ + LL A+ + +++ + I
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 191 DS-MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
++ + D+ + L++ + K LP AR F +M+ A ++V++ +V L A
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF-DMMDA---KNIVAWNSLVSGLSYA 304
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
+ +A ++ M+ P + ++ L Y + E A+D +M+ KG+ +VV +
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIIS-----SLISQGRTDRAFEVF 364
A+ K F+N +V +M+ GV PN+ T + ++ SL+ G+ F +
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 365 RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
+ + IC DA T ++ M+ + ++ A++I+ +K+K SL +++ ++ G G
Sbjct: 425 KNL--IC--DAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMFG 476
Query: 425 NAMKACVLLEEMIEKGIRPSRVTF 448
+ M+E G+ P +TF
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITF 500
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 142/326 (43%), Gaps = 22/326 (6%)
Query: 163 VPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARE 222
+ N++ N L+ ++ + ++++F+SMK R +L +++ +L + K + A
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR---NLSSWNSILSSYTKLGYVDDAIG 176
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
EM G PD+V++ ++ G +A+ V+K M P++ S L+
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 283 VENRIE--DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
++ AI ++ R + DV V LI + K R V M++ +
Sbjct: 237 EPGHLKLGKAIHGYIL--RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV-- 292
Query: 341 SRTCNVIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWK 399
N ++S L A + RM K +PDA T+ + + + + A+ +
Sbjct: 293 --AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 400 DMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEK 459
MK K P++ +++A+ +G +NGN A + +M E+G+ P+ T L ++L
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL---- 406
Query: 460 REDVLTFLHEKINL----LVKEPLCD 481
L+ LH + L K +CD
Sbjct: 407 --GCLSLLHSGKEVHGFCLRKNLICD 430
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 139/297 (46%), Gaps = 23/297 (7%)
Query: 145 AHKVDEAVYTFNVM--DKYEVPQNLAAFN---------GLLSALCK--SRNVRKAQEIFD 191
A + EA+ FN M D+ P ++AA++ GLL L K R +K ++
Sbjct: 268 ARRPQEALQIFNQMLGDRQLYP-DMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTK 326
Query: 192 SMKGR-----FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDIL 246
+++ + EPDL Y+ +L F E+ G P+ +YG+ ++++
Sbjct: 327 NLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVM 386
Query: 247 CKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADV 306
++G+ D + + M + P + Y VLV E +IE+A++A +ME+KG+
Sbjct: 387 LESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTG 446
Query: 307 VVYNALIGAFCKANKFKNVRRVLKEMES-NGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
VY L C ++ + + M+ P T +I++ ++ G D +F+
Sbjct: 447 SVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQ 506
Query: 366 RMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR---FVPSLHTFSALING 419
M C+P+ T MM+K++ + A ++++++ S++ VP+ +T+S ++
Sbjct: 507 YMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEA 563
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 62/373 (16%)
Query: 85 FEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYA 143
F+ A+R RN VR ++++ L+ + W V M G+ E + ++ +
Sbjct: 172 FDPAKRWRNEGEAVR---VLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLG 228
Query: 144 RAHKVDEAVYTFNVMDKYEVPQNLAA---FNGLLSALCKSRNVRKAQEIFDSMKGRFEPD 200
R +A + + + ++L + + LLS L +R ++A +IF+ M G D
Sbjct: 229 RKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLG----D 284
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVK 260
+ Y PD+ +Y + L +AG + E ++V++
Sbjct: 285 RQLY-----------------------------PDMAAYHCIAVTLGQAGLLKELLKVIE 315
Query: 261 DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKAN 320
M PT +N + D LE D+VVYNA++ A
Sbjct: 316 RMRQK---PTKL----------TKNLRQKNWDPVLE-------PDLVVYNAILNACVPTL 355
Query: 321 KFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYT 379
++K V V E+ NG+ PN T + + ++ G+ DR + FR+M E P A TY
Sbjct: 356 QWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYK 415
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE- 438
++++ +++ A++ +DM+ K + + + L LC NG A + + M
Sbjct: 416 VLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRL 475
Query: 439 KGIRPSRVTFGKL 451
+ RP +TF L
Sbjct: 476 ENCRPLEITFTGL 488
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 128/287 (44%), Gaps = 3/287 (1%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIV 138
+AF E + N V Y ++I+S ++ + + D+++ MR +G+ N T+ +
Sbjct: 203 AAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTL 262
Query: 139 MRKYARAHKVDEAVYTF-NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR- 196
+ Y +A E T ++ + + + N L A + + + ++ +
Sbjct: 263 IDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSG 322
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAV 256
EP+++T++ILL+ +GK N K M S +V+Y +++D +AG + +
Sbjct: 323 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 382
Query: 257 EVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ + M P+ LV YG ++ + +E I+ D+V +N L+ A+
Sbjct: 383 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 442
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+ KF ++ VL+ ME G P+ T ++ + G T E+
Sbjct: 443 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 40/303 (13%)
Query: 186 AQEIFDSMKGR--FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMV 243
A ++F+ ++ + ++P++ Y L+ GK KA E F+EM++ GC + Y +V
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 244 DILCKAGRVDEAVEVVKDM-DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGI 302
++GR D A +++ M +NC P YS+L+ ++ + D +M R+GI
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEM------------------------------ 332
+ + + YN LI A+ KA F + L +M
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 333 ------ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEP-DADTYTMMIKMF 385
+S+G+ PN RT N+++ S G + V M K TY ++I F
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 386 CERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSR 445
++ +++ M+S+R PS T +L+ + A K +L + IR
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDL 432
Query: 446 VTF 448
V F
Sbjct: 433 VFF 435
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 167/372 (44%), Gaps = 36/372 (9%)
Query: 80 SAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIV 138
SA + FE Q Y V Y +I L + +Q + ++ +M N+G ++N E + +
Sbjct: 132 SAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTAL 191
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE 198
+ Y+R+ + D AAF LL + S N +
Sbjct: 192 VSAYSRSGRFD------------------AAFT-LLERMKSSHNC--------------Q 218
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGR-VDEAVE 257
PD+ TYSIL++ + + K ++ +M G P+ ++Y ++D KA V+
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+++ + +++C P S+ + + +G +IE + + + + GI+ ++ +N L+ ++
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDAD 376
K+ +K + V++ M+ + T NV+I + G + +FR M + P
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCV 398
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
T +++ + ++ D + + +++ L F+ L++ + + +LE M
Sbjct: 399 TLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELM 458
Query: 437 IEKGIRPSRVTF 448
+KG +P ++T+
Sbjct: 459 EKKGFKPDKITY 470
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%)
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
P ++Y M+D CK RVD+A ++ M C P +S L++ Y R+++ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
F EM R+GI A+ V Y LI FC+ + +L EM S GV P+ T + +++ L S
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 354 QGRTDRAFEVFRRMIK 369
+ +AF + + K
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 70/137 (51%)
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
P TY+ +++G+ K + A+ M S GCSPDVV++ +++ CKA RVD +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+M + + Y+ L+H + ++ A D EM G+ D + ++ ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 319 ANKFKNVRRVLKEMESN 335
+ + +L++++ +
Sbjct: 128 KKELRKAFAILEDLQKS 144
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGR 356
M R I + YN++I FCK ++ + +R+L M S G +P+ T + +I+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 357 TDRAFEVF----RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
D E+F RR I + TYT +I FC+ ++D A + +M S P T
Sbjct: 61 VDNGMEIFCEMHRRGIV---ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Query: 413 FSALINGLCQNGNAMKACVLLEEM 436
F ++ GLC KA +LE++
Sbjct: 118 FHCMLAGLCSKKELRKAFAILEDL 141
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
PT+ Y+ ++ + ++R++DA M KG DVV ++ LI +CKA + N +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCE 387
EM G+ N+ T +I G D A ++ MI PD T+ M+ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 388 RNEMDMAMKIWKDMK 402
+ E+ A I +D++
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAM 395
+ P + T N +I Q R D A + M K C PD T++ +I +C+ +D M
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLL 455
+I+ +M + V + T++ LI+G CQ G+ A LL EMI G+ P +TF + L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 456 IKEK 459
+K
Sbjct: 126 CSKK 129
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
T+ ++ + + +VD+A + M ++ F+ L++ CK++ V EIF M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 194 KGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
R + TY+ L+ G+ + +L A++ EM+S G +PD +++ M+ LC +
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 253 DEAVEVVKDM 262
+A +++D+
Sbjct: 132 RKAFAILEDL 141
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 158 MDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPN 216
M ++ + +N ++ CK V A+ + DSM + PD+ T+S L+ G+ K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
+ E F EM G + V+Y ++ C+ G +D A +++ +M
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 153/350 (43%), Gaps = 19/350 (5%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
T V+ R K + +++ + N+ +N + A +VRK + +
Sbjct: 132 TVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYL---DVRKPEIALEHY 188
Query: 194 K-----GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
K P + T+ IL++G + NL KA E +M G D V Y ++ K
Sbjct: 189 KLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVK 248
Query: 249 AGRVDEAVEVVKDMDD--NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM--ERKGIKA 304
D +++ +++ + + +Y L+ Y ++ ++A++ + E E ++
Sbjct: 249 NSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRM 308
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTP-----NSRTCNVIISSLISQGRTDR 359
+ YN ++ A + KF ++ ++ P N T NV+++ + G+ +
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 360 AFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
A EVFR+M C PD ++ ++ C+ + A K++ +M+ K P +T+ L++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKE-KREDVLTFL 467
+ G + + M+E +RP+ + +L+ LIK K +D +F
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF 478
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 29/233 (12%)
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMV 228
A+N +L AL ++ +A ++FD++K K+ N P+
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVK------------------KEHNPPRH-------- 345
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE 288
+ ++ ++ +MV+ C G+ +EA+EV + M D C P + ++ L++ +
Sbjct: 346 ---LAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLA 402
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+A + EME K +K D Y L+ K K K M + + PN N +
Sbjct: 403 EAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
Query: 349 SSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
LI G+ D A F M+ + D + Y +++ E +D +KI +M
Sbjct: 463 DQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 97 TVRAYHLMIESLARIRQYQ---IMWDIVTKMRNKG---MLNVETFCIVMRKYARAHKVDE 150
+ AY+ ++E+L+ ++ ++D V K N +N+ TF +++ Y K +E
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 151 AVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLE 209
A+ F M ++ + +FN L++ LC + + +A++++ M+ + +PD TY +L++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 210 GWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
K+ + + ++ MV + P++ Y + D L KAG++D+A
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 474
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFR 365
+ N ++ A + K+ + ++ + G+ PN T N+I + + + + A E ++
Sbjct: 130 IFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYK 189
Query: 366 RMIKIC--EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
I P T+ +++K + ++ AM+I +DM K FV +S L+ G +N
Sbjct: 190 LFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKN 249
Query: 424 GNAMKACVLLEEMIEK--GIRPSRVTFGKL-RQLLIKEKREDVLTFLHEKI 471
+A L +E+ EK G V +G+L + +KE ++ + E +
Sbjct: 250 SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAV 300
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 146/303 (48%), Gaps = 30/303 (9%)
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSI 206
K+ EA F+ + + +V + +++ K ++R+A+E+FD + R ++ T++
Sbjct: 61 KIAEARKLFDGLPERDV----VTWTHVITGYIKLGDMREARELFDRVDSR--KNVVTWTA 114
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
++ G+ + L A F+EM +VVS+ M+D ++GR+D+A+E+ +M + N
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
+ + + LV RI++A++ F M R+ DVV + A++ K K R
Sbjct: 171 IVSWNSMVKALVQ----RGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEAR 222
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFC 386
R+ M + + N +I+ R D A ++F+ M E D ++ MI F
Sbjct: 223 RLFDCMPERNII----SWNAMITGYAQNNRIDEADQLFQVM---PERDFASWNTMITGFI 275
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG-IRPSR 445
EM+ A ++ M K + +++ +I G +N +A + +M+ G ++P+
Sbjct: 276 RNREMNKACGLFDRMPEKNVI----SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV 331
Query: 446 VTF 448
T+
Sbjct: 332 GTY 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 169/381 (44%), Gaps = 51/381 (13%)
Query: 97 TVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFN 156
V + M+ R +Q I + +M + NV ++ ++ YA++ ++D+A+ F+
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER---NVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 157 VMDKYEVPQ-NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDP 215
E+P+ N+ ++N ++ AL + + +A +F+ M R D+ +++ +++G K+
Sbjct: 165 -----EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR---DVVSWTAMVDGLAKNG 216
Query: 216 NLPKARETFREMVSAGCSPD--VVSYGIMVDILCKAGRVDEAVEVV-----KDMDDNNCM 268
+ +AR F C P+ ++S+ M+ + R+DEA ++ +D N M
Sbjct: 217 KVDEARRLF------DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTM 270
Query: 269 PTSFI----------------------YSVLVHTYGVENR-IEDAIDAFLEMERKG-IKA 304
T FI ++ ++ Y VEN+ E+A++ F +M R G +K
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEKNVISWTTMITGY-VENKENEEALNVFSKMLRDGSVKP 329
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
+V Y +++ A +++ + + + N + +++ G A ++F
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF 389
Query: 365 RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
+ +C+ D ++ MI ++ A++++ M+ F PS T+ L+ G
Sbjct: 390 DNGL-VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Query: 425 NAMKACVLLEEMIEKGIRPSR 445
K ++++ P R
Sbjct: 449 LVEKGMEFFKDLVRDESLPLR 469
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 132/303 (43%), Gaps = 26/303 (8%)
Query: 139 MRKYARAHKVDEAVYTFN-VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM---K 194
+R ++ + +A FN + +P +L N +L + V ++F + +
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 195 GRFEPDLKTYSILLEGWGKDPN--LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
F P T+ ILL + P+ + MV+ G PD V+ I V LC+ GRV
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVH----------TYGVENRIEDAIDAFLEMERKGI 302
DEA +++K++ + + P ++ Y+ L+ Y + + D D +
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD---------V 226
Query: 303 KADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
K D+V + LI C + + ++ ++ + G P+ N I+ + + A
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 363 VFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
V+++M + EPD TY +I + ++ A K M + P T+++L+NG+C
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 422 QNG 424
+ G
Sbjct: 347 RKG 349
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 9/302 (2%)
Query: 159 DKYEVPQNL-AAFNGLLSALCKSRNVRKAQEIFDSMKG--RFEPDLKTYSILLEGWGKDP 215
D ++PQN A L KS N+ A+ +F+S+ R DLK ++ +L+ +G
Sbjct: 40 DSAKLPQNTQAPREPSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIA 99
Query: 216 NLPKARETFREMVSAGCS--PDVVSYGIMVDILCKA--GRVDEAVEVVKDMDDNNCMPTS 271
+ + F+ ++ + + P ++ I++ C+A + V+ M +N P
Sbjct: 100 VVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQ 159
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
+ V + R+++A D E+ K D YN L+ CK V + E
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 332 MESN-GVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERN 389
M + V P+ + ++I ++ + A + ++ +PD Y ++K FC +
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 390 EMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFG 449
+ A+ ++K MK + P T++ LI GL + G +A + L+ M++ G P T+
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 450 KL 451
L
Sbjct: 340 SL 341
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 53/294 (18%)
Query: 65 ELVENVLKRFEN--AGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVT 122
+L +++LK N G S F +H RA I ++ R+ +
Sbjct: 106 KLFQHILKSQPNFRPGRSTFLIL--------LSHACRAPDSSISNVHRV---------LN 148
Query: 123 KMRNKGMLNVE-TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
M N G+ + T I +R +VDEA + + P + +N LL LCK +
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 182 NVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
++ E D M+ F D+K PD+VS+ I
Sbjct: 209 DLHVVYEFVDEMRDDF--DVK-------------------------------PDLVSFTI 235
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKG 301
++D +C + + EA+ +V + + P F+Y+ ++ + ++ +A+ + +M+ +G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 302 IKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
++ D + YN LI KA + + R LK M G P++ T +++ + +G
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 149/322 (46%), Gaps = 20/322 (6%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
L V T I M Y + ++++A V DK +++ ++ L+ + AQ++
Sbjct: 169 LYVHTSLISM--YVQNGRLEDA---HKVFDK-SPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 190 FDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
FD + + D+ +++ ++ G+ + N +A E F++M+ PD + +V ++
Sbjct: 223 FDEIPVK---DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G ++ +V +DD+ I + L+ Y +E A F + K DV+ +
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISW 335
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD--RAFEVF-RR 366
N LIG + N +K + +EM +G TPN T I+ + G D R V+ +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 367 MIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
+K + T +I M+ + +++ A +++ + K SL +++A+I G +G A
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK----SLSSWNAMIFGFAMHGRA 451
Query: 427 MKACVLLEEMIEKGIRPSRVTF 448
+ L M + GI+P +TF
Sbjct: 452 DASFDLFSRMRKIGIQPDDITF 473
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 10/263 (3%)
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
EP+L ++ + G + A + + M+S G P+ ++ ++ K+ E +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+ + C ++++ L+ Y R+EDA F K DVV Y ALI +
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYA 211
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDAD 376
+N +++ E+ V + N +IS G A E+F+ M+K PD
Sbjct: 212 SRGYIENAQKLFDEIPVKDVV----SWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
T ++ + +++ ++ + F +L +ALI+ + G AC L E +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 437 IEKGIRPSRVTFGKLRQL-LIKE 458
K + G + L KE
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKE 350
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+GK +A +TF M GC V S+ + +L + E + D +
Sbjct: 116 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 175
Query: 271 SFI-YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVL 329
+ +++ + ++ ++ A A EME+ G+ DVV Y LI A K + +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 330 KEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCER 388
M G PN T NV I L+++ R A ++ M K+ EPD+ TY M+IK F
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
DMA +++ M K + P+L + +I+ LC+ GN A + ++ + K P+ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 449 GKLRQLLIKEKRED----VLTFLHEKI 471
L + L+K+ + D ++ +H ++
Sbjct: 356 EMLLKGLVKKGQLDQAKSIMELVHRRV 382
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 3/259 (1%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDL 201
Y +A +A+ TF MD Y +++ +FN L L + ++ E ++ D+
Sbjct: 116 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 175
Query: 202 K--TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
+++I ++ + + L A REM +G +PDVV+Y ++ L K R +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
M C P ++V + R DA D L M + ++ D + YN +I F A
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR-MIKICEPDADTY 378
RV M G PN + +I L G D A+ + + M K P+ DT
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 379 TMMIKMFCERNEMDMAMKI 397
M++K ++ ++D A I
Sbjct: 356 EMLLKGLVKKGQLDQAKSI 374
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
+ RE F E+ + C+ ++ ++ KA + A+E+ +D+ D P + Y ++V
Sbjct: 371 RIRERFSEISLSVCNH-------LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVV 423
Query: 279 HTYGV-------ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
+ + + +ME KG+K +NA++ A KA++ ++ K
Sbjct: 424 SHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKA 483
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNE 390
M NG P + ++S+L D AF V+ MIK+ EP+ YT M + + +
Sbjct: 484 MVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQK 543
Query: 391 MDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGK 450
++ + K+M SK PS+ TF+A+I+G +NG + A M + + P+ +T+
Sbjct: 544 FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 451 LRQLLIKEKREDVLTFLHEK 470
L + L + + + LH K
Sbjct: 604 LIEALANDAKPRLAYELHVK 623
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 9/230 (3%)
Query: 166 NLAAFNGLLSALCKSRNVRKAQEIF-DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETF 224
+L+ N L+ + K++ A EI+ D + EP+ +Y +++ + + R +
Sbjct: 380 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIW 439
Query: 225 R-------EMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
R +M G P + ++ KA A+++ K M DN PT Y L
Sbjct: 440 RWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGAL 499
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ ++A + M + GI+ ++ Y + KF + +LKEM S G+
Sbjct: 500 LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFC 386
P+ T N +IS G + A+E F RM + EP+ TY M+I+
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 11/300 (3%)
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF-EPDLKTYSILLEGWGK 213
N MD V + L+ A + + +E++ ++ RF E L + L+ GK
Sbjct: 334 LNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGK 393
Query: 214 DPNLPKARETFREMVSAGCSPDVVSY-------GIMVDILCKAGRVDEAVEVVKDMDDNN 266
A E + +++ G P+ +SY I++ K G V ++ M+D
Sbjct: 394 AKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKG 453
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
P ++ ++ + AI F M G K V+ Y AL+ A K +
Sbjct: 454 LKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAF 513
Query: 327 RVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMF 385
RV M G+ PN + S L Q + + + + M K EP T+ +I
Sbjct: 514 RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISG- 572
Query: 386 CERNEMD-MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
C RN + +A + + MKS+ P+ T+ LI L + A L + +G++ S
Sbjct: 573 CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLS 632
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 144/361 (39%), Gaps = 53/361 (14%)
Query: 125 RNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVR 184
+N ++V +R A VD + DK E+P L F ++ K + ++
Sbjct: 111 KNNLRVDVRELAFSLRAAKTADDVDAVL-----KDKGELP--LQVFCAMIKGFGKDKRLK 163
Query: 185 KAQEIFDSMK-------GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
A + D +K G P+L Y+ LL G +A + ++M G P++V
Sbjct: 164 PAVAVVDWLKRKKSESGGVIGPNLFIYNSLL---GAMRGFGEAEKILKDMEEEGIVPNIV 220
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA---F 294
+Y ++ I + G +A+ ++ + P YS + Y R+ED + A F
Sbjct: 221 TYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVY---RRMEDGMGALEFF 277
Query: 295 LEMERKGIKADV------------VVYNALIGAFCKA----------NKFKNVRRVLKEM 332
+E+ K K ++ V IG C N V ++L M
Sbjct: 278 VELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAM 337
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEM 391
+S GV P+ +I + + E+++R+ + E +I + + +
Sbjct: 338 DSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKW 397
Query: 392 DMAMKIWKDMKSKRFVPS-------LHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
A++I++D+ + P+ + F+ L++ + G LL +M +KG++P
Sbjct: 398 WAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQ 457
Query: 445 R 445
R
Sbjct: 458 R 458
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 172/392 (43%), Gaps = 40/392 (10%)
Query: 62 ASPELVENVLKRFENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIV 121
A EL N+L ENA S R + + N T +AY +I++LA+ Q +
Sbjct: 38 AMEELRSNLLTDSENA--SVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLE------ 89
Query: 122 TKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSR 181
+ +Y V +K++ P+++ F +++A S
Sbjct: 90 -------------------------NISSVLYHLEVSEKFDTPESI--FRDVIAAYGFSG 122
Query: 182 NVRKAQEIFDSMKG-RFEPDLKTY-SILLEGWGKDPNLPKARETFREMVSAGCSPDVVSY 239
+ +A E+F + R P T ++LL K +L E + G + ++
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTF 182
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTY--GVENRIEDAIDAFLEM 297
GI++D LC+ G VD A E+V+ M ++ + +YS L+ + ++ D I ++
Sbjct: 183 GILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDL 242
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
+ + Y ++ + + K V VL +M+ + V P+ +++ +I+
Sbjct: 243 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 302
Query: 358 DRAFEVF-RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
+A ++F ++ PD TY + I C++N+++ A+K+ M P++ T++ L
Sbjct: 303 PKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNIL 362
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
I L + G+ +A L +EM G+ + TF
Sbjct: 363 IKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 169/392 (43%), Gaps = 48/392 (12%)
Query: 22 LSTGEPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSA 81
L EP PQ + +T+ K SS + + L V + E++ + A +
Sbjct: 65 LHNCEPTPQAYRFVIKTLAK---SSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFS 121
Query: 82 FRFFEWAE---RQRNYAHTVRAYHL--MIESLARIRQ-YQIMWDIVTKMRNKGM-LNVET 134
R E E + N+ AY L ++ L R RQ +++ +I+ K G+ L T
Sbjct: 122 GRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEEST 181
Query: 135 FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRN------------ 182
F I++ R +VD A M + V + ++ LLS++CK ++
Sbjct: 182 FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLED 241
Query: 183 VRKAQ-------------------------EIFDSMK-GRFEPDLKTYSILLEGWGKDPN 216
+RK + + + MK R EPDL Y+I+L+G D +
Sbjct: 242 LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED 301
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
PKA + F E++ G +PDV +Y + ++ LCK ++ A++++ M+ P Y++
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
L+ + A + EME G+ + ++ +I A+ + ++ +L+E +
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
V S +IS L +G D+A E+ ++
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 144/373 (38%), Gaps = 72/373 (19%)
Query: 139 MRKYAR-AHKVDEAVYTFNVMDKY---EVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK 194
MRKY + H + + N+ KY E+ NL L S N + + S +
Sbjct: 14 MRKYRKIPHSSFKTKWNENLKQKYAMEELRSNL---------LTDSENASVMRTLLSSFQ 64
Query: 195 -GRFEPDLKTYSILLEGWGKDPNLPKARETFR--EMVSAGCSPD------VVSYGIMVDI 245
EP + Y +++ K L E+ +P+ + +YG
Sbjct: 65 LHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGF---- 120
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENR--IEDAIDAFLEMERKGIK 303
+GR++EA+EV + + C+P+++ + L+ V R +E + ++ R G++
Sbjct: 121 ---SGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVL-VRKRQSLELVPEILVKACRMGVR 176
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+ + LI A C+ + +++ M + V + R + ++SS + + + F+V
Sbjct: 177 LEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSS-VCKHKDSSCFDV 235
Query: 364 FRRMIKI----CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL--------- 410
+ + P YT++++ E + + MK R P L
Sbjct: 236 IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQG 295
Query: 411 --------------------------HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
+T++ INGLC+ + A ++ M + G P+
Sbjct: 296 VIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 445 RVTFGKLRQLLIK 457
VT+ L + L+K
Sbjct: 356 VVTYNILIKALVK 368
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 180/385 (46%), Gaps = 63/385 (16%)
Query: 104 MIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEV 163
M+ + R+ W + +M NV ++ +++ + ++AV F+ E+
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPK----NVVSWTVMLTALCDDGRSEDAVELFD-----EM 164
Query: 164 PQ-NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARE 222
P+ N+ ++N L++ L ++ ++ KA+++FD+M R D+ +++ +++G+ ++ + +A+
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR---DVVSWNAMIKGYIENDGMEEAKL 221
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
F +M +VV++ MV C+ G V EA + +M + N + ++ ++ +
Sbjct: 222 LFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS----WTAMISGFA 273
Query: 283 VENRIEDAIDAFLEMERK-------------------GIKADVVVYNALIGAFCKANKFK 323
+A+ FLEM++ G+ + + A +N ++
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 324 NV-------RRVLKEMESNGVTPNSRT----------CNVIISSLISQGRTDRAFEVFRR 366
V + ++ S+G+ ++++ CN+II+ + G +RA +F R
Sbjct: 334 TVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFER 393
Query: 367 MIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
+ + D ++T MI + E ++ A +++ + K V T++ +I+GL QN
Sbjct: 394 VKSL--HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV----TWTVMISGLVQNELF 447
Query: 427 MKACVLLEEMIEKGIRPSRVTFGKL 451
+A LL +M+ G++P T+ L
Sbjct: 448 AEAASLLSDMVRCGLKPLNSTYSVL 472
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 44/253 (17%)
Query: 120 IVTKMRNKGMLN-VETFCIVMRKYARAHKVDEAVYTFNVMDK------------------ 160
++ K+ +G +N V + ++ KYA+ +DEA F VM +
Sbjct: 64 LLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRR 123
Query: 161 --------YEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWG 212
E+P+N+ ++ +L+ALC A E+FD M E ++ +++ L+ G
Sbjct: 124 MNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMP---ERNVVSWNTLVTGLI 180
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
++ ++ KA++ F M S DVVS+ M+ + ++EA + DM + N +
Sbjct: 181 RNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV---- 232
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
++ +V+ Y + +A F EM + ++V + A+I F ++ + EM
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 333 ES--NGVTPNSRT 343
+ + V+PN T
Sbjct: 289 KKDVDAVSPNGET 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 126/296 (42%), Gaps = 18/296 (6%)
Query: 130 LNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
++++ I++ +Y + ++ A F ++ + + ++ ++ ++ +V +A +
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLF---ERVKSLHDKVSWTSMIDGYLEAGDVSRAFGL 422
Query: 190 FDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
F + + D T+++++ G ++ +A +MV G P +Y +++
Sbjct: 423 FQKLH---DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGAT 479
Query: 250 GRVDEA--VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
+D+ + V P + + LV Y IEDA + F +M ++ D V
Sbjct: 480 SNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTV 535
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+N++I + KEM +G PNS T ++S+ G R E+F+ M
Sbjct: 536 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM 595
Query: 368 IKI--CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
+ +P D Y MI + ++ A + + + F P + AL+ GLC
Sbjct: 596 KETYSIQPGIDHYISMIDLLGRAGKLKEAEEF---ISALPFTPDHTVYGALL-GLC 647
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 32/257 (12%)
Query: 152 VYTFNVMDKYEVPQN-----LAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSI 206
V+ +++DK +PQ + + LLS K+ + +A+ +F+ M E ++ T +
Sbjct: 59 VHARHLLDK--IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP---ERNIVTCNA 113
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
+L G+ K + +A FREM +VVS+ +M+ LC GR ++AVE+ +M + N
Sbjct: 114 MLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVR 326
+ + + + L+ +E A F M + DVV +NA+I + + + + +
Sbjct: 169 VVSWNTLVTGLIRN----GDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAK 220
Query: 327 RVLKEM-ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMF 385
+ +M E N VT S ++ G A+ +F M E + ++T MI F
Sbjct: 221 LLFGDMSEKNVVTWTS-----MVYGYCRYGDVREAYRLFCEMP---ERNIVSWTAMISGF 272
Query: 386 CERNEMDMAMKIWKDMK 402
A+ ++ +MK
Sbjct: 273 AWNELYREALMLFLEMK 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 49/252 (19%)
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
DL++ +I++ + K+ +L +A F + S D VS+ M+D +AG V A +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLF 423
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
+ + D D V + +I +
Sbjct: 424 QKLHDK---------------------------------------DGVTWTVMISGLVQN 444
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE---VFRRMIKICEPDAD 376
F +L +M G+ P + T +V++SS + D+ V + +PD
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
++ M+ + ++ A +I+ M K V +++++I GL +G A KA L +EM
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV----SWNSMIMGLSHHGLADKALNLFKEM 560
Query: 437 IEKGIRPSRVTF 448
++ G +P+ VTF
Sbjct: 561 LDSGKKPNSVTF 572
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 155/362 (42%), Gaps = 19/362 (5%)
Query: 94 YAHT----VRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKV 148
++HT + Y+ +I + D+ +R G+ L+ TF +V++ RA
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILL 208
+ +++ K ++AA LLS S + A ++FD + R + T++ L
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR---SVVTWTALF 184
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
G+ +A + F++MV G PD ++ G +D +VK M++
Sbjct: 185 SGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ 244
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRV 328
SF+ + LV+ Y ++E A F M ++ D+V ++ +I + + K +
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 329 LKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTY--TMMIKMFC 386
+M + P+ + +SS S G D E +I E + + +I M+
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 387 ERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
+ M +++K+MK K V +A I+GL +NG+ + + + + GI P
Sbjct: 360 KCGAMARGFEVFKEMKEKDIV----IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 447 TF 448
TF
Sbjct: 416 TF 417
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 132/322 (40%), Gaps = 13/322 (4%)
Query: 119 DIVTKMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
D+ KM G+ F + V+ +D + M++ E+ +N L++
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257
Query: 178 CKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
K + KA+ +FDSM E D+ T+S +++G+ + + E F +M+ PD
Sbjct: 258 AKCGKMEKARSVFDSM---VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
S + G +D + +D + + F+ + L+ Y + + F EM
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
+ K D+V+ NA I K K V + E G++P+ T ++ + G
Sbjct: 375 KEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLI 430
Query: 358 DRAFEVFRRM--IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSA 415
F + + + + Y M+ ++ +D A ++ DM + P+ + A
Sbjct: 431 QDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR---PNAIVWGA 487
Query: 416 LINGLCQNGNAMKACVLLEEMI 437
L++G + A +L+E+I
Sbjct: 488 LLSGCRLVKDTQLAETVLKELI 509
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 21/284 (7%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
N L+S S A +FD G + D+ T++ +++G+ ++ + +A F EM
Sbjct: 142 NSLISGYSSSGLFDFASRLFD---GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKT 198
Query: 231 GCSPDVVSYGIMVDILCKAGRVDE-----AVEVVKDMDDNNCMPTSFIYSVLVHTYGVEN 285
G + + ++ +V +L AG+V++ +V + ++ FI S LV YG +
Sbjct: 199 GVAANEMT---VVSVLKAAGKVEDVRFGRSVHGLY-LETGRVKCDVFIGSSLVDMYGKCS 254
Query: 286 RIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCN 345
+DA F EM + +VV + ALI + ++ F V +EM + V PN +T +
Sbjct: 255 CYDDAQKVFDEMPSR----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 346 VIISSLISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSK 404
++S+ G R V MIK E + T +I ++ + ++ A+ +++ + K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+++T++A+ING +G A A L M+ + P+ VTF
Sbjct: 371 ----NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTF 410
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 162/396 (40%), Gaps = 24/396 (6%)
Query: 15 FVSFARMLSTGEPPPQEV-ADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKR 73
F+++ M G P + L + V K+ S+P A + + G+ + P + +++
Sbjct: 89 FLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNP-FQFHAHIVKFGLDSDPFVRNSLISG 147
Query: 74 FENAGMSAF--RFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLN 131
+ ++G+ F R F+ AE + V + MI+ R +M+ G+
Sbjct: 148 YSSSGLFDFASRLFDGAEDK-----DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAA 202
Query: 132 VETFCIVMRKYARAHKVDEAVYTFNVMDKY----EVPQNLAAFNGLLSALCKSRNVRKAQ 187
E + + K A KV++ + +V Y V ++ + L+ K AQ
Sbjct: 203 NEMTVVSVLK--AAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 188 EIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC 247
++FD M R ++ T++ L+ G+ + K F EM+ + +P+ + ++
Sbjct: 261 KVFDEMPSR---NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACA 317
Query: 248 KAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
G + V M N+ + + L+ Y +E+AI F + K +V
Sbjct: 318 HVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK----NVY 373
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+ A+I F ++ + M S+ V+PN T ++S+ G + +F M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 368 IKI--CEPDADTYTMMIKMFCERNEMDMAMKIWKDM 401
EP AD Y M+ +F + ++ A + + M
Sbjct: 434 KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 179 KSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVS 238
++ N+ A+ +F+S+ P + ++ ++ G+ PN KA ++EM+ G SPD +
Sbjct: 53 ETMNLSYARSVFESIDC---PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFT 109
Query: 239 YGIMVDILCKAGRVDEAVEVVKDMDDNNCMP----------TSFIYSVLVHTYGVENRIE 288
+ ++ +A ++D+ +C+ ++ + L+H Y +
Sbjct: 110 FPYVL----------KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVN 159
Query: 289 DAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII 348
+ F ++ + +VV + +LI F N+F + +EM+SNGV N +++
Sbjct: 160 YGLRVFEDIP----QWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANE---TIMV 212
Query: 349 SSLISQGR-----TDRAFEVFRRMIKICEP--------DADTYTMMIKMFCERNEMDMAM 395
L++ GR T + F F + + +P + T +I M+ + ++ A
Sbjct: 213 DLLVACGRCKDIVTGKWFHGFLQGLGF-DPYFQSKVGFNVILATSLIDMYAKCGDLRTAR 271
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
++ M + V +++++I G QNG+A +A + +M++ GI P +VTF
Sbjct: 272 YLFDGMPERTLV----SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 320
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 136 CIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-- 193
C ++ YA+ + A F ++K ++ A+ ++ L + +A IF M
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDLEK----KDTIAWTVVIIGLASHGHGNEALSIFQRMQE 411
Query: 194 KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVS-AGCSPDVVSYGIMVDILCKAGRV 252
KG PD TY +L + + + F EM G P V YG MVDIL +AGR
Sbjct: 412 KGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRF 471
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
+EA +VK M P I+ L++ + +E D M + + +Y L
Sbjct: 472 EEAERLVKTMP---VKPNVNIWGALLNGCDIHENLE-LTDRIRSMVAEPEELGSGIYVLL 527
Query: 313 IGAFCKANKFKNVRRVLKEMES 334
+ KA ++ +V+ + + M+S
Sbjct: 528 SNIYAKAGRWADVKLIRESMKS 549
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 36/326 (11%)
Query: 101 YHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVMD 159
Y ++I + A R+ I + + K +L C+ V+ Y R ++ + M
Sbjct: 286 YSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMR 345
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFD-SMKGRFEPDLKTYSILLEGWGKDPNLP 218
K E+ +++ K R +A ++++ +MK E TY+I + + +
Sbjct: 346 KAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYN 405
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
KA F EMV G VV+Y ++D+ K R+ +AV ++ M C P +IY+ L+
Sbjct: 406 KAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLI 465
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+G + A + EM+R + D V Y ++I A+ ++ + + + +E N
Sbjct: 466 DMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMN--- 522
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIW 398
+G+ DRA +M+ +F + + +D M++
Sbjct: 523 ---------------RGKIDRAMA----------------GIMVGVFSKTSRIDELMRLL 551
Query: 399 KDMKSKRFVPSLHTFSALINGLCQNG 424
+DMK + +S+ +N L G
Sbjct: 552 QDMKVEGTRLDARLYSSALNALRDAG 577
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 133/309 (43%), Gaps = 15/309 (4%)
Query: 135 FCIVMR---KYARAHKVDEAVYTFNVMD-KYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+C +M K HKV E F + ++ + + + S+L KS +A E+
Sbjct: 212 YCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVL 271
Query: 191 DSMKGRFEPDL-KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+ MK + P+ + YS+L+ + + + + F+E D +V + +
Sbjct: 272 EEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVRE 331
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G ++ +EVV M T I +V+ + + +A+ + ++ +A V Y
Sbjct: 332 GNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTY 391
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQ-GRTDRAFEVFRRMI 368
I A+C+ K+ + EM G C V S+++ G+T R + R M
Sbjct: 392 AIAINAYCRLEKYNKAEMLFDEMVKKGFDK----CVVAYSNIMDMYGKTRRLSDAVRLMA 447
Query: 369 KI----CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
K+ C+P+ Y +I M ++ A KIWK+MK + +P +++++I+
Sbjct: 448 KMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY-NRS 506
Query: 425 NAMKACVLL 433
++ CV L
Sbjct: 507 KELERCVEL 515
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 105/221 (47%), Gaps = 2/221 (0%)
Query: 134 TFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 193
T+ I + Y R K ++A F+ M K + + A++ ++ K+R + A + M
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 194 KGRF-EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
K R +P++ Y+ L++ G+ +L +A + ++EM A PD VSY M+ ++ +
Sbjct: 450 KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
+ VE+ ++ N + ++V + +RI++ + +M+ +G + D +Y++
Sbjct: 510 ERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSA 569
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
+ A A + R L+E T S+ N + +S
Sbjct: 570 LNALRDAGLNSQI-RWLQESFDAAQTSTSKYSNTKNTGTLS 609
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 5/237 (2%)
Query: 229 SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN----CMPTSFIYSVLVHTYGVE 284
S G P Y +++ K G + VE+ ++ + IY+++ +
Sbjct: 202 SVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKS 261
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
R +A++ EM+ KGI +Y+ LI AF +A + ++ KE + + C
Sbjct: 262 GRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMC 321
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKICEPDAD-TYTMMIKMFCERNEMDMAMKIWKDMKS 403
++ + +G + EV M K D ++ F ++ A+K+++
Sbjct: 322 LKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMK 381
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKR 460
+ T++ IN C+ KA +L +EM++KG V + + + K +R
Sbjct: 382 EECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRR 438
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 157/366 (42%), Gaps = 13/366 (3%)
Query: 79 MSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCI 137
+ A F+ Q Y Y ++ L + Q + +M +G+ VE +
Sbjct: 105 LQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTA 164
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYE-VPQ---NLAAFNGLLSALCKSRNVRKAQEIFDSM 193
++ Y R++ +D+A F+++DK + PQ ++ ++ LL A + ++ M
Sbjct: 165 LLAAYTRSNLIDDA---FSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEM 221
Query: 194 KGRF-EPDLKTYSILLEGWGKDPNLPKARETFREM-VSAGCSPDVVSYGIMVDILCKAGR 251
R P+ T +I+L G+G+ + + +M VS C PDV + I++ + G+
Sbjct: 222 DERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGK 281
Query: 252 VDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK-GIKADVVVYN 310
+D + + P + +++L+ +YG + R+ D + + +E RK YN
Sbjct: 282 IDMMESWYEKFRNFGIEPETRTFNILIGSYG-KKRMYDKMSSVMEYMRKLEFPWTTSTYN 340
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
+I AF KN+ +M S G+ +++T +I+ + G + + K
Sbjct: 341 NIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKF 400
Query: 371 CEPDADTYTMMIKMFCERNEMDMAM-KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKA 429
P+ + + C + + + M +++ MK ++ V TF ++ + G K
Sbjct: 401 EIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKI 460
Query: 430 CVLLEE 435
L +E
Sbjct: 461 YYLEQE 466
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 18/312 (5%)
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-GRF 197
M YA +++ A F+ M +V +N ++ C+ V +A ++F+ MK
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDV----VTWNTMIERYCRFGLVDEAFKLFEEMKDSNV 208
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
PD ++ G+ N+ R + ++ D +V + AG +D A E
Sbjct: 209 MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE 268
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+ M N F+ + +V Y R++DA F + E+K D+V + +I A+
Sbjct: 269 FFRKMSVRNL----FVSTAMVSGYSKCGRLDDAQVIFDQTEKK----DLVCWTTMISAYV 320
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDAD 376
+++ + RV +EM +G+ P+ + +IS+ + G D+A V + + E +
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
+I M+ + +D +++ M + V ++S++IN L +G A A L M
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVV----SWSSMINALSMHGEASDALSLFARM 436
Query: 437 IEKGIRPSRVTF 448
++ + P+ VTF
Sbjct: 437 KQENVEPNEVTF 448
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 13/262 (4%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDL 201
YA A +D A F M +NL ++S K + AQ IFD + + DL
Sbjct: 257 YAGAGCMDMAREFFRKMS----VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK---DL 309
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
++ ++ + + +A F EM +G PDVVS ++ G +D+A V
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ N I + L++ Y ++ D F +M R+ +VV ++++I A +
Sbjct: 370 IHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMINALSMHGE 425
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYT 379
+ + M+ V PN T ++ G + ++F M P + Y
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 380 MMIKMFCERNEMDMAMKIWKDM 401
M+ +F N + A+++ + M
Sbjct: 486 CMVDLFGRANLLREALEVIESM 507
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 31/286 (10%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
N L++ K + A ++FD M R ++ +++ ++ + K KA E M+
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQR---NVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 231 GCSPDVVSYGI-------MVDI-LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYG 282
P+V +Y M D+ + G + E +E F+ S L+ +
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-----------SDVFVRSALIDVFA 205
Query: 283 VENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSR 342
EDA+ F EM + D +V+N++IG F + ++ + K M+ G
Sbjct: 206 KLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 343 TCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
T ++ + + + ++K + D ++ M+C+ ++ A++++ MK
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKY-DQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+ + T+S +I+GL QNG + +A L E M G +P+ +T
Sbjct: 321 ERDVI----TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 53/218 (24%)
Query: 160 KYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPK 219
KY+ Q+L N L+ CK ++ A +F+ MK E D+ T+S ++ G ++ +
Sbjct: 288 KYD--QDLILNNALVDMYCKCGSLEDALRVFNQMK---ERDVITWSTMISGLAQNGYSQE 342
Query: 220 ARETFREMVSAGCSPDVVS------------------------------------YGIMV 243
A + F M S+G P+ ++ YG M+
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 244 DILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
D+L KAG++D+AV+++ +M+ C P + + L+ V+ + E K +
Sbjct: 403 DLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLGACRVQRNM-----VLAEYAAKKVI 454
Query: 304 A----DVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
A D Y L + + K+ +V + M G+
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 142/354 (40%), Gaps = 84/354 (23%)
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQ-NLAAFNGLLSALCKSRNVRKAQEIFDSM-K 194
+++ Y + + +++A F+ M PQ N+ ++ ++SA K + +KA E+ M +
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQM-----PQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 195 GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE 254
P++ TYS +L + R ++ G DV ++D+ K G ++
Sbjct: 156 DNVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 255 AVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA---------- 304
A+ V +M + + +++ ++ + +R + A++ F M+R G A
Sbjct: 213 ALSVFDEMVTGD----AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 305 -----------------------DVVVYNALIGAFCKANKFKNVRRVLKEME-------- 333
D+++ NAL+ +CK ++ RV +M+
Sbjct: 269 ACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWS 328
Query: 334 -----------------------SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI 370
S+G PN T ++ + G + + FR M K+
Sbjct: 329 TMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Query: 371 --CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+P + Y MI + + ++D A+K+ +M+ + P T+ L+ G C+
Sbjct: 389 YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLL-GACR 438
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 238 SYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEM 297
+Y I++ LCK GR+D+A+ V+ DM + T Y ++ + + +IE+A M
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESM 168
Query: 298 ERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
K + DV YN + + C + ++ V++++E +G +P+SR+ + ++ G+
Sbjct: 169 RSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKV 228
Query: 358 DRAFEVFRRMIKICEPDA-----DTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
+ A + RRM E D T+ +I E + ++ K +
Sbjct: 229 EAAMAILRRM----EEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSES 284
Query: 413 FSALINGLCQNGNAMKACVLLEEMIEKGIR 442
F L L + +A ++++EM+ +G+R
Sbjct: 285 FGFLAGKLVKRKRYEEAMIVVKEMVMRGLR 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 126 NKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRK 185
+ G + I++ + + ++D+A+ M + + ++ +L +L + + +
Sbjct: 101 DGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEE 160
Query: 186 AQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVD 244
A + +SM+ + D+ Y+ L D L A E R++ G SPD SY +V
Sbjct: 161 AWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVL 220
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAF-----LEMER 299
C+AG+V+ A+ +++ M+++ + +YS H + + +E A +
Sbjct: 221 GACRAGKVEAAMAILRRMEEDG---VTVLYS--THAHVITGLVEGGYYALGLEFVMAYAG 275
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
K ++ D + L G K +++ V+KEM G+
Sbjct: 276 KDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGL 313
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 15/282 (5%)
Query: 162 EVPQ-NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKA 220
E+P NL +N +L A KS +V A+ +FD M E D+ T+S +++G+ K KA
Sbjct: 168 EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS---ERDVVTWSSMIDGYVKRGEYNKA 224
Query: 221 RETFREMVSAGCSPDVVSYGIMVDILC---KAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
E F +M+ G S + MV ++C G ++ V + + D + T + + L
Sbjct: 225 LEIFDQMMRMGSSK--ANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSL 282
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+ Y I DA F K + D +++NA+IG + ++ +M + +
Sbjct: 283 IDMYAKCGSIGDAWSVFYRASVK--ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKI 340
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMK 396
P+ T ++++ G A+ F+ + + EP ++ Y M+ + + A
Sbjct: 341 DPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHD 400
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
+M K P+ AL+NG +GN A + +++IE
Sbjct: 401 FISEMPIK---PTGSMLGALLNGCINHGNLELAETVGKKLIE 439
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 123/310 (39%), Gaps = 46/310 (14%)
Query: 174 LSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS 233
SAL S +V A + + +P ++ ++ G+ N K+ + +M+ G
Sbjct: 49 FSALSSSGDVDYAYKFLSKLS---DPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLL 105
Query: 234 PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDA 293
PD ++Y ++ + + + + FI + L+H YG A
Sbjct: 106 PDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKL 165
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
F EM K ++V +N+++ A+ K+ + R V EM V T + +I +
Sbjct: 166 FDEMPHK----NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV----TWSSMIDGYVK 217
Query: 354 QGRTDRAFEVFRRMIKICEPDADTYTMM----------------------------IKMF 385
+G ++A E+F +M+++ A+ TM+ + +
Sbjct: 218 RGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVI 277
Query: 386 CERNEMDMAMKIWK--DMKSKRFVPSLH-----TFSALINGLCQNGNAMKACVLLEEMIE 438
+ + +DM K D S + S+ ++A+I GL +G ++ L +M E
Sbjct: 278 LQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRE 337
Query: 439 KGIRPSRVTF 448
I P +TF
Sbjct: 338 SKIDPDEITF 347
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREM 227
+ +L ++ ++ +F MK + D TY+ L+ ++ A + EM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 228 VSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI 287
GC P VVSY + +L GRV+EA EV K+M + P Y+VL+ +
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
E+A+D F +M+ G++ D N LI K + + RVL M+ NGV
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEA 303
Query: 348 ISSLISQGRTDRAFEVFRRMIKI---CEPDAD 376
+ +L + G +D I + C D D
Sbjct: 304 LETLKAAGESDDLLREVNSHISVESLCSSDID 335
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 193 MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRV 252
+KG F+ D TY+ +L+ +G+ + F M G D V+Y ++ + +G V
Sbjct: 115 IKG-FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
D A+ + ++M DN C PT Y+ + + R+E+A + + EM R + + Y L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRT 357
+ K + + +M+ GV P+ CN++I+ + G T
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGET 278
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
KG K D Y ++ F +A + +++ V M+ GV ++ T +I + S G D
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 360 AFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
A ++ M CEP +YT +KM ++ A +++K+M R P+ HT++ L+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 419 GLCQNGNAMKACVLLEEMIEKGIRPSR 445
L G +A + +M E G++P +
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDK 262
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G D +Y M+DI +AGR+ V M + + + Y+ L+H ++ A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ + EM G + VV Y A + + + V KEM + V+PN T V++
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 351 LISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR---- 405
L++ G+ + A ++F +M +I +PD ++I + E ++ MK
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLR 296
Query: 406 ---FVPSLHTFSA 415
FV +L T A
Sbjct: 297 YPIFVEALETLKA 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/522 (19%), Positives = 187/522 (35%), Gaps = 73/522 (13%)
Query: 28 PPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRASPELVENVLKRFENAGMSAFRFFEW 87
P D+ + ++ S + L GVR ++ VLK A+ FF W
Sbjct: 53 PSVYTRDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKA-HPPMQKAWLFFNW 111
Query: 88 AERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAH 146
A + + + H Y M++ + Q M+ + M+ KG+L + T+ ++ + +
Sbjct: 112 AAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSG 171
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYS 205
VD A+ + M + ++ + L V +A E++ M + R P+ TY+
Sbjct: 172 DVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYT 231
Query: 206 ILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN 265
+L+E +A + F +M G PD + I++ K G V+ M +N
Sbjct: 232 VLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKEN 291
Query: 266 NCMPTSFIYSVLVHTYGVENRIED------------------------------------ 289
+ I+ + T +D
Sbjct: 292 GVVLRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDS 351
Query: 290 --------------AIDAFL-EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMES 334
A+D L +M + IK D V +A+I C + +
Sbjct: 352 RVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLE 411
Query: 335 NGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTY--TMMIKMFCERNEMD 392
G+ +I + + + EV + M+K + Y M+I
Sbjct: 412 MGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVK-AQHSLGCYQGAMLIHRLGFGRRPR 470
Query: 393 MAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVT----- 447
+A ++ + + + ++AL++ G+ KA +L EM E+ I PS T
Sbjct: 471 LAADVFDLLPDDQ--KGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLL 528
Query: 448 --------FGKLRQLLIKEKREDVLTFLHEKINLLVKEPLCD 481
F K LL KEK+ V + + N+ V++ +CD
Sbjct: 529 SGLEKTSDFQKEVALLRKEKKSLVASARFRE-NVHVEDKICD 569
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 24/283 (8%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
N L+S N+ A+ IF +M R D TY+ L+ G + KA E F+ M
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQR---DAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 231 GCSPDVVSYGIMVDILCKA------GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVE 284
G PD + +V + C A G+ A NN I L++ Y
Sbjct: 384 GLEPDSNTLASLV-VACSADGTLFRGQQLHAYTTKLGFASNNK-----IEGALLNLYAKC 437
Query: 285 NRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
IE A+D FLE E + +VV++N ++ A+ + +N R+ ++M+ + PN T
Sbjct: 438 ADIETALDYFLETEVE----NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 345 NVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKS 403
I+ + I G + ++ ++IK + +A +++I M+ + ++D A I
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 404 KRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRV 446
K V +++ +I G Q KA +M+++GIR V
Sbjct: 554 KDVV----SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D+ +++ ++ G+ + KA TFR+M+ G D V G+ + AG +A++
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV--GLTNAVSACAGL--QALKEG 610
Query: 260 KDMDDNNCMPTSF-----IYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIG 314
+ + C+ + F + LV Y +IE++ AF + E D + +NAL+
Sbjct: 611 QQIHAQACV-SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE----AGDNIAWNALVS 665
Query: 315 AFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKIC-EP 373
F ++ + RV M G+ N+ T + + + +V + K +
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725
Query: 374 DADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLL 433
+ + +I M+ + + A K + ++ +K V +++A+IN ++G +A
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV----SWNAIINAYSKHGFGSEALDSF 781
Query: 434 EEMIEKGIRPSRVTF 448
++MI +RP+ VT
Sbjct: 782 DQMIHSNVRPNHVTL 796
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 130/292 (44%), Gaps = 27/292 (9%)
Query: 169 AFNGLLSALCKSRNVRKAQEIFDSM------------KGRFEPDLKTYSILLEGWGKDPN 216
A+N L+ + V A+ +FD + + RF ++ +++ +++ + K +
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 217 LPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV 276
+ AR F +M D +S+ M+D R+++A + +M + + +++
Sbjct: 297 VVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS----WNM 348
Query: 277 LVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNG 336
+V Y +E A F + K V +N++I A+ K +K + M G
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEK----HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 337 VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMK 396
P+ T ++S+ ++ + ++K PD + +I M+ E+ + +
Sbjct: 405 EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRR 464
Query: 397 IWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
I+ +MK KR V T++A+I G +GNA +A L M GI PS +TF
Sbjct: 465 IFDEMKLKREVI---TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 140/341 (41%), Gaps = 54/341 (15%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMD 159
+++ MI+ + + + + + ++M N+ + ++ +++ YA V+ A + F
Sbjct: 314 SWNTMIDGYVHVSRMEDAFALFSEMPNR---DAHSWNMMVSGYASVGNVELARHYFE--- 367
Query: 160 KYEVPQ-NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE-PDLKTYSILLEGWGKDPNL 217
+ P+ + ++N +++A K+++ ++A ++F M E PD T + LL NL
Sbjct: 368 --KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 218 PKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVL 277
+ ++V PDV + ++ + + G + E+ + +M
Sbjct: 426 RLGMQ-MHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK-------------- 470
Query: 278 VHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGV 337
+K +V+ +NA+IG + + M+SNG+
Sbjct: 471 ------------------------LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Query: 338 TPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI--CEPDADTYTMMIKMFCERNEMDMAM 395
P+ T ++++ G D A F M+ + EP + Y+ ++ + + + + AM
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAM 566
Query: 396 KIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
I + S F P + AL++ N A V E M
Sbjct: 567 YI---ITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 246 LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKAD 305
+ ++G + EA ++ + ++ N + ++ ++ Y + A F M ++ D
Sbjct: 50 MIRSGYIAEARDIFEKLEARN----TVTWNTMISGYVKRREMNQARKLFDVMPKR----D 101
Query: 306 VVVYNALIGAF--CKANKF-KNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFE 362
VV +N +I + C +F + R++ EM S +S + N +IS R A
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALL 157
Query: 363 VFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQ 422
+F +M E +A +++ MI FC+ E+D A+ +++ M K P AL+ GL +
Sbjct: 158 LFEKM---PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIK 210
Query: 423 NGNAMKACVLLEE 435
N +A +L +
Sbjct: 211 NERLSEAAWVLGQ 223
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 287 IEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNV 346
I +A D F ++E + + V +N +I + K + R++ M V T N
Sbjct: 56 IAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV----TWNT 107
Query: 347 IISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKR 405
+IS +S G R E R++ ++ D+ ++ MI + + + A+ +++ M +
Sbjct: 108 MISGYVSCGGI-RFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 406 FVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRP 443
V ++SA+I G CQNG A VL +M K P
Sbjct: 167 AV----SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 138/329 (41%), Gaps = 55/329 (16%)
Query: 165 QNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETF 224
N+ N L++ + R++ A+++FD M D+ +++ ++E + K A E F
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMS---VWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 225 REMVSA-GCSPDVVSY-----------------------------------GIMVDILCK 248
M + GC PD ++ +VD+ K
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVV 308
G +DEA V +M + + ++ +V Y R EDA+ F +M+ + IK DVV
Sbjct: 277 CGMMDEANTVFSNMSVKDVVS----WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 309 YNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI 368
++A I + + V ++M S+G+ PN T ++S S G E+ I
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 369 KI-------CEPDAD-TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
K D + +I M+ + ++D A ++ + K + T++ +I G
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGY 450
Query: 421 CQNGNAMKACVLLEEMIEKG--IRPSRVT 447
Q+G+A KA LL EM E+ RP+ T
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFT 479
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 143/357 (40%), Gaps = 45/357 (12%)
Query: 153 YTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGW 211
Y + + + + P NL FN L+ KA + M K R PD T+ L++
Sbjct: 69 YAYGIFSQIQNP-NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 212 GKDPNLPKARETFREMVSAG-----------------CS--------------PDVVSYG 240
+ + +T ++V G C DVVS+
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 241 IMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
MV CK G V+ A E+ +M N F +S++++ Y N E AID F M+R+
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNL----FTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRA 360
G+ A+ V ++I + + R + + + +T N ++ G ++A
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 361 FEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
VF + E D+ +++ +IK AM + M S F+P TF+A+++
Sbjct: 304 IHVFE---GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
Query: 421 CQNGNAMKACVLLEEM-IEKGIRPSRVTFGKLRQLLIKEKR----EDVLTFLHEKIN 472
G K + E M + GI P +G + +L + + E+ + +H K N
Sbjct: 361 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN 417
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 15/251 (5%)
Query: 165 QNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETF 224
+++ ++ +++ CK V A+E+FD M R +L T+SI++ G+ K+ KA + F
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHR---NLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 225 REMVSAGCSPDVVSYGIMVDILCKAGRVD--EAVEVVKDMDDNNCMPTSFIY-SVLVHTY 281
M G V + +MV ++ + E E + + M + I + LV +
Sbjct: 238 EFMKREGV---VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
IE AI F + + D + ++++I +M S G P
Sbjct: 295 WRCGDIEKAIHVFEGLP----ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRD 350
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIWK 399
T ++S+ G ++ E++ M K EP + Y ++ M ++ A
Sbjct: 351 VTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFIL 410
Query: 400 DMKSKRFVPSL 410
M K P L
Sbjct: 411 KMHVKPNAPIL 421
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/309 (17%), Positives = 123/309 (39%), Gaps = 42/309 (13%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCI-VMRKYARAHKVDEAVYTFNVM 158
+ +MI A+ ++ D+ M+ +G++ ET + V+ A ++ + +
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV 275
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLP 218
K + NL L+ + ++ KA +F+ + E D ++S +++G +
Sbjct: 276 VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP---ETDSLSWSSIIKGLAVHGHAH 332
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLV 278
KA F +M+S G P V++ ++ G V++ +E+ ++M +
Sbjct: 333 KAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD------------- 379
Query: 279 HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVT 338
+G+E R+E Y ++ +A K + +M V
Sbjct: 380 --HGIEPRLEH-------------------YGCIVDMLGRAGKLAEAENFILKMH---VK 415
Query: 339 PNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMAMKIW 398
PN+ ++ + T+ A V +IK+ + Y ++ ++ + D ++
Sbjct: 416 PNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWD-KIESL 474
Query: 399 KDMKSKRFV 407
+DM ++ V
Sbjct: 475 RDMMKEKLV 483
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 203/488 (41%), Gaps = 67/488 (13%)
Query: 4 ICNPRKKLLCKFVSFARMLSTGEPPPQEVADLTETVCKVMMSSPGVTLDAALNQTGVRAS 63
I NPRK+ +C SF +T A+L++ V ++ +L Q G+R
Sbjct: 3 ISNPRKRPICVAQSFLSKHATK-------AELSQAVSRL----------ESLTQQGIRLP 45
Query: 64 PELVENVLKRFENAGMSAFRFFEWAERQRNYA-----HTVRAYHLM---------IESLA 109
+L+ ++L++ + + + +W R +T+ + HL+ I++
Sbjct: 46 FDLLASLLQQCGDT--KSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK 103
Query: 110 RIRQYQI----MWD-IVTKMRNKGML-------------NVETFCIVMRKYARAHKVDEA 151
Q + W+ +V+ GML +V ++ ++ YA+ + EA
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 152 VYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS-MKGRFEPDLKTYSILLEG 210
++ + + + N +F GLL+A KSR ++ ++ + F ++ +++
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 211 WGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT 270
+ K + A+ F EM D+ + ++ K G ++ A ++ +M + N P
Sbjct: 224 YAKCGQMESAKRCFDEMTV----KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN--PV 277
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
S ++ L+ Y + A+D F +M G+K + +++ + A ++ + +
Sbjct: 278 S--WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHG 335
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADT--YTMMIKMFCER 388
M V PN+ ++ISSLI + E R+ +IC+ D + MI +
Sbjct: 336 YMIRTNVRPNA----IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM-IEKGIRPSRVT 447
A+++ DM R P+ T ++N +G + E M ++ GI P +
Sbjct: 392 GLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEH 451
Query: 448 FGKLRQLL 455
+ L LL
Sbjct: 452 YACLIDLL 459
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 124/314 (39%), Gaps = 14/314 (4%)
Query: 97 TVRAYHL---MIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVDEAVY 153
TV+ H+ +I A++ + + +M K N ++ ++ Y R + A+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK---NPVSWTALIAGYVRQGSGNRALD 297
Query: 154 TFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWG 212
F M V F+ L A ++R +EI M + P+ S L++ +
Sbjct: 298 LFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYS 357
Query: 213 KDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSF 272
K +L + FR D V + M+ L + G +A+ ++ DM P
Sbjct: 358 KSGSLEASERVFR---ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRT 414
Query: 273 IYSVLVHTYGVENRIEDAIDAFLEME-RKGIKADVVVYNALIGAFCKANKFKNVRRVLKE 331
V+++ +E+ + F M + GI D Y LI +A FK + R ++E
Sbjct: 415 TLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEE 474
Query: 332 MESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEM 391
M P+ N I+ G + + +IK+ + Y ++ ++ + +
Sbjct: 475 MP---FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKW 531
Query: 392 DMAMKIWKDMKSKR 405
++ K+ MK +R
Sbjct: 532 ELVEKLRGVMKKRR 545
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 45/294 (15%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMR 140
A F W +QR Y H AYH MI+ +T RN VET
Sbjct: 91 ALDIFRWTAQQRGYKHNHEAYHTMIK------------QAITGKRNNF---VETL----- 130
Query: 141 KYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV-RKAQEIFDSM--KGRF 197
++E + M VP +N ++ C + + +A ++++ M
Sbjct: 131 -------IEEVIAGACEMS---VP----LYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDS 176
Query: 198 EPDLKTYSILLEGWGKDPN--------LPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+PDL+TY++LL K N L R ++M S G PD +++ K
Sbjct: 177 KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKC 236
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
VDEA+ V K+M P ++ YS LV + R+ + + EM+ KG+ + Y
Sbjct: 237 LEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCY 296
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
LI + + V+ +M +N ++P+ T N +++ L GR A E+
Sbjct: 297 MVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEM 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 325 VRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIK 383
VR + K+M+SNGV P++ N+II + D A VF+ M + EP+A TY+ ++K
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 384 MFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRP 443
CE+ + + +K+M+ K VP+ + LI L +A ++ +M+ + P
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSP 326
Query: 444 SRVTFGKLRQLLIKEKR 460
+T+ + L + R
Sbjct: 327 DMLTYNTVLTELCRGGR 343
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 296 EMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG 355
+M+ G+ D V N +I A+ K + RV KEM G PN+ T + ++ + +G
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 356 RTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFS 414
R + ++ M +K P+ Y ++I +D A+++ DM + P + T++
Sbjct: 273 RVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYN 332
Query: 415 ALINGLCQNGNAMKACVLLEE 435
++ LC+ G +A ++EE
Sbjct: 333 TVLTELCRGGRGSEALEMVEE 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFC 317
+ K M N +P +F+ ++++ Y +++AI F EM G + + Y+ L+ C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 318 KANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDAD 376
+ + KEM+ G+ PN V+I SL + R D A EV M+ PD
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDML 329
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
TY ++ C A+++ ++ K + V + L++
Sbjct: 330 TYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 213 KDPNLPKA-RETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTS 271
++P PK +E F +M + G + + V M D L K GR EA+E+ + D N MP
Sbjct: 176 EEPEDPKNLQEIFHKMRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDV 232
Query: 272 FIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI-GAFCKANKFKNVRRVLK 330
++ +V Y + ++ + F+ M G+ + Y+ LI G K+ ++ L
Sbjct: 233 VAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLL 292
Query: 331 EMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
EM NG++PN+ T + + + +G+ + A E+ + M
Sbjct: 293 EMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEM 329
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Query: 176 ALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPD 235
A+ + + + QEIF M R E + + KD +A E F ++ PD
Sbjct: 174 AIEEPEDPKNLQEIFHKM--RTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPD 231
Query: 236 VVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI-EDAIDAF 294
VV++ +V+ AG+ E ++V M + P ++ YSVL+ + + +DA
Sbjct: 232 VVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYL 291
Query: 295 LEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTC 344
LEM G+ + Y A+ AF + K ++ R +L+EM+ G P+ +
Sbjct: 292 LEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAV 341
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 26/291 (8%)
Query: 157 VMDKYEVPQNLAAFNGLLSALCK-SRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDP 215
V E +N+ N LLS K +R+ + +FD GRF D +++ ++ G+
Sbjct: 88 VKSGLETDRNVG--NSLLSLYFKLGPGMRETRRVFD---GRFVKDAISWTSMMSGYVTGK 142
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILC-----KAGRVDEAVEVVKDMDDNNCMPT 270
KA E F EMVS G + + V + GR V + + N+
Sbjct: 143 EHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNH---- 198
Query: 271 SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLK 330
FI S L + YGV DA F EM + DV+ + A++ AF K + ++ +
Sbjct: 199 -FISSTLAYLYGVNREPVDARRVFDEMP----EPDVICWTAVLSAFSKNDLYEEALGLFY 253
Query: 331 EME-SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMI-KICEPDADTYTMMIKMFCER 388
M G+ P+ T ++++ + R + E+ ++I + + ++ M+ +
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC 313
Query: 389 NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
+ A +++ M K V ++SAL+ G CQNG KA + EM EK
Sbjct: 314 GSVREARQVFNGMSKKNSV----SWSALLGGYCQNGEHEKAIEIFREMEEK 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 15/304 (4%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVM 139
A F R + + ++ + +R+ + +I K+ G+ NV ++
Sbjct: 248 ALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLL 307
Query: 140 RKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEP 199
Y + V EA FN M K +N +++ LL C++ KA EIF M+ E
Sbjct: 308 DMYGKCGSVREARQVFNGMSK----KNSVSWSALLGGYCQNGEHEKAIEIFREME---EK 360
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
DL + +L+ + +E + V GC +V+ ++D+ K+G +D A V
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
M N + + + S L R E+A+ F +M +KGIK D + + A++ A
Sbjct: 421 SKMSIRNMITWNAMLSALAQN----GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 320 NKFKNVRRVLKEM-ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTY 378
R M +S G+ P + + +I L G + A + R C DA +
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER--AECRNDASLW 534
Query: 379 TMMI 382
+++
Sbjct: 535 GVLL 538
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 186 AQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA-GCSPDVVSYGIMVD 244
A+ +FD M EPD+ ++ +L + K+ +A F M G PD ++G ++
Sbjct: 217 ARRVFDEMP---EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKA 304
R+ + E+ + N + S L+ YG + +A F M +K
Sbjct: 274 ACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK---- 329
Query: 305 DVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVF 364
+ V ++AL+G +C+ + + + +EME + ++ + E+
Sbjct: 330 NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVLKACAGLAAVRLGKEIH 385
Query: 365 RRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQN 423
+ ++ C + + +I ++ + +D A +++ M + + T++A+++ L QN
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI----TWNAMLSALAQN 441
Query: 424 GNAMKACVLLEEMIEKGIRPSRVTF 448
G +A +M++KGI+P ++F
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISF 466
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 38/287 (13%)
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
K Y+++ +G+ K N K E MV V SY V +C + A+ + +
Sbjct: 839 KIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEF 898
Query: 262 MDDNNCMPTS-FIYSVLV-HTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
+ P IY++L+ + + +N +E LEM+ +G+ D +N L+ + +
Sbjct: 899 LLLGESNPGGVIIYNMLIFYMFRAKNHLE-VNKVLLEMQGRGVLPDETTFNFLVHGYSSS 957
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM------------ 367
+ + R L M S G+ PN+R+ + SSL G +A ++++ M
Sbjct: 958 ADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVV 1017
Query: 368 -IKICE--------PDAD--------------TYTMMIKMFCERNEMDMAMKIWKDMKSK 404
KI E P A+ Y +IK +R +D+A+ + M
Sbjct: 1018 QTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKN 1077
Query: 405 RFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ +P ++ ++INGL + KA EM+E G+ PS T+ L
Sbjct: 1078 QSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGL 1124
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 140/314 (44%), Gaps = 8/314 (2%)
Query: 74 FENAGMSAFRFFEWAERQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVE 133
E +SA E+ + V Y+++I + R + + + ++ +M+ +G+L E
Sbjct: 885 LEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDE 944
Query: 134 T-FCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDS 192
T F ++ Y+ + ++ + M + N + + S+LC + +V+KA +++
Sbjct: 945 TTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQV 1004
Query: 193 M--KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGC-SPDVVSYGIMVDILCKA 249
M KG + ++E +PKA + + G +P+ Y ++ L
Sbjct: 1005 MESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDR 1061
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G +D AV ++ M N +P S Y +++ N+++ A+D EM G+ + +
Sbjct: 1062 GNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTW 1121
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIK 369
+ L+ FC+A + R++K M G +P+ +I + T +A E+ M K
Sbjct: 1122 SGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQK 1181
Query: 370 IC-EPDADTYTMMI 382
E D +T+ +I
Sbjct: 1182 CGYEVDFETHWSLI 1195
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 163/422 (38%), Gaps = 56/422 (13%)
Query: 81 AFRFFEWAERQRNYAHTVRAYHLMIESLARIRQ----YQIMWDIVTKMRNKGMLNVETFC 136
A F+W R++ Y ++I+ L R+ + Y+I D V +N+++
Sbjct: 202 AVMLFDWM-RRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIG 260
Query: 137 IVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKG- 195
V+ KV EA V+ + V + + S + N ++ E S G
Sbjct: 261 KVIELLCLDQKVQEA----RVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGE 316
Query: 196 -RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDE 254
++EPD+ + +L + +A E+ G D V++GI++ C G +
Sbjct: 317 VKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376
Query: 255 AVEVVKDMDDNNCMPTSFIYSVLVHTY---GVENRIEDAIDAFLEMERKGIKADVVVYNA 311
AV + ++ P + Y+ ++ G+ +D EM+ G+ + +
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILD---EMKENGMMLSLSTFKI 433
Query: 312 LIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQG----------RTDRAF 361
++ +CKA +F+ +R++ +M G+ S+ + + + G D F
Sbjct: 434 MVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTF 493
Query: 362 ---EVFRRMIK--ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSAL 416
E F + D D Y + M +R+ L F++L
Sbjct: 494 SKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRS-------------------VLPEFNSL 534
Query: 417 INGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQLLIKEKREDVLTFLHEKINLLVK 476
I ++G+ A LL+EM G + SR +F L + L + L I+LL K
Sbjct: 535 IVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASR-----AHLRVSISLLEK 589
Query: 477 EP 478
P
Sbjct: 590 WP 591
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 40/288 (13%)
Query: 164 PQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARE 222
P + +N L+ + +++N + ++ M+GR PD T++ L+ G+ + +
Sbjct: 906 PGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLR 965
Query: 223 TFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNC-MPTSFIYSVLVHTY 281
M+S G P+ S + LC G V +A+++ + M+ + +S + + +V T
Sbjct: 966 YLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETL 1025
Query: 282 GVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
+ I A D + R G+ A PN
Sbjct: 1026 ISKGEIPKAEDFLTRVTRNGMMA----------------------------------PNY 1051
Query: 342 RTCNVIISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKD 400
II L +G D A + M+K P + +Y +I N++D AM +
Sbjct: 1052 DN---IIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTE 1108
Query: 401 MKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
M PS+ T+S L++ C+ +++ L++ M+ G PS+ F
Sbjct: 1109 MVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMF 1156
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 146/370 (39%), Gaps = 39/370 (10%)
Query: 82 FRFFEWAERQ-RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKG--MLNVETFCIV 138
+ F WA Q + + H +A +M L R + + ++ +M G M+N FC +
Sbjct: 130 WEIFRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDL 189
Query: 139 MRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE 198
+ KY +AV F+ M + + + + L+ L + A
Sbjct: 190 IGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESA------------ 237
Query: 199 PDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEV 258
Y I L+ W + R M ++ S G ++++LC +V EA +
Sbjct: 238 -----YRICLD-W------VETRAELNHM-------NIDSIGKVIELLCLDQKVQEARVL 278
Query: 259 VKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCK 318
+ + C+ S IYS + Y + ED + E++ + DV V N ++ + C+
Sbjct: 279 ARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK---YEPDVFVGNRILHSLCR 335
Query: 319 ANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRR-MIKICEPDADT 377
+ ++E+E G + T ++I +G RA M K +PD +
Sbjct: 336 RFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYS 395
Query: 378 YTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
Y ++ + I +MK + SL TF ++ G C+ +A ++ +M
Sbjct: 396 YNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMF 455
Query: 438 EKG-IRPSRV 446
G I S+V
Sbjct: 456 GYGLIEASKV 465
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 112/247 (45%), Gaps = 12/247 (4%)
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
+ Y+ L++G + A EM+ P + S +++ LC+A + A + +
Sbjct: 740 EVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQ 799
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+D +S+++ L+ + ++ DA + M G+ + +YN + +CK N
Sbjct: 800 ID------SSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNN 853
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD---TY 378
+ V VL M + + ++ + + + ++ A + + + + E + Y
Sbjct: 854 WMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISL-KEFLLLGESNPGGVIIY 912
Query: 379 TMMI-KMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMI 437
M+I MF +N +++ K+ +M+ + +P TF+ L++G + + + L MI
Sbjct: 913 NMLIFYMFRAKNHLEVN-KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971
Query: 438 EKGIRPS 444
KG++P+
Sbjct: 972 SKGMKPN 978
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 158/390 (40%), Gaps = 40/390 (10%)
Query: 92 RNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGM-LNVETFCIVMRKYARAHKVDE 150
+ Y V +Y+ ++ L R +Q I+ +M+ GM L++ TF I++ Y +A + +E
Sbjct: 387 KGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEE 446
Query: 151 AVYTFNVMDKYEVPQ------------NLAAFNGLLSALCKSRNVRKAQ-EIFDSMKG-- 195
A N M Y + + +L F+ L L + + ++ E FD +
Sbjct: 447 AKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGL 506
Query: 196 RFEPDLKTY----------SILLE------GWGKDPNLPKARETFREMVSAGCSPDVVSY 239
DL Y S+L E +D +L A EM G S+
Sbjct: 507 YLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSF 566
Query: 240 GIMVDILCKA-GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEME 298
+++ LC + + ++ +++ + LV Y + + F +M
Sbjct: 567 AVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMV 626
Query: 299 RKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTD 358
+ D V Y +LI FCK ++ V +++ P+ C + + L+ +G +
Sbjct: 627 QMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVE 686
Query: 359 RAFEVFRRMIKICEPDADTYTMMIKMFCERNEMD----MAMKIWKDMKSKRFVPSLHTFS 414
++F R+ I P + + ++F E+ + +A + K ++ + + ++
Sbjct: 687 EVVQLFERVF-ISYPLSQSEA--CRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYN 743
Query: 415 ALINGLCQNGNAMKACVLLEEMIEKGIRPS 444
LI GLC A +L+EM++K PS
Sbjct: 744 HLIKGLCTEKKDSAAFAILDEMLDKKHIPS 773
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 165/354 (46%), Gaps = 49/354 (13%)
Query: 131 NVETFCIVMRKYARAHKVD-EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEI 189
+V T+ ++ YA A+ +D EA+ F M V + ++F ++ + +R +++
Sbjct: 259 SVVTWNSMISGYA-ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 190 FDSM-KGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
S+ K F D + L+ + K + A F+E+ GC +VVS+ M+ +
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQ 374
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVL-----------VHTYGVENRIEDA------- 290
+EAV++ +M P F YSV+ VH V+ E +
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTAL 434
Query: 291 IDAFLEMER--------KGIK-ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNS 341
+DA++++ + GI D+V ++A++ + + + + ++ E+ G+ PN
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Query: 342 RTCNVIIS------SLISQGRTDRAFEVFRRM-IKICEPDADTYTMMIKMFCERNEMDMA 394
T + I++ + + QG+ F + R+ +C A ++ M+ ++ ++ A
Sbjct: 495 FTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA-----LLTMYAKKGNIESA 549
Query: 395 MKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
+++K + K V +++++I+G Q+G AMKA + +EM ++ ++ VTF
Sbjct: 550 EEVFKRQREKDLV----SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 161/373 (43%), Gaps = 38/373 (10%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGML-NVETFCIVMRKYARAHKV 148
++RN V + +I AR + + +M+N+G N TF + A
Sbjct: 155 KERN----VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 149 DEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILL 208
+ V+ K + + + N L++ K NVRKA+ +FD + + + T++ ++
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK---SVVTWNSMI 267
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC---KAGRVDEAVE--VVKD-- 261
G+ + +A F M S+ ++ LC K R E + VVK
Sbjct: 268 SGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK-LCANLKELRFTEQLHCSVVKYGF 326
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ D N I + L+ Y + DA+ F E+ G +VV + A+I F + +
Sbjct: 327 LFDQN------IRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDG 377
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSL--ISQGRTDRAFEVFRRMIKI-CEPDADTY 378
+ + EM+ GV PN T +VI+++L IS EV +++K E +
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS------EVHAQVVKTNYERSSTVG 431
Query: 379 TMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIE 438
T ++ + + +++ A K++ + K V +SA++ G Q G A + E+ +
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIV----AWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 439 KGIRPSRVTFGKL 451
GI+P+ TF +
Sbjct: 488 GGIKPNEFTFSSI 500
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 126/293 (43%), Gaps = 27/293 (9%)
Query: 119 DIVTKMRNKGML-NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSAL 177
D+ ++M+ KG+ N T+ +++ + V+ V YE + LL A
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTALPVISPSE--VHAQVVKTNYERSSTVG--TALLDAY 438
Query: 178 CKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVV 237
K V +A ++F + + D+ +S +L G+ + A + F E+ G P+
Sbjct: 439 VKLGKVEEAAKVFSGID---DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 238 SYGIMVDILCKA-------GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
++ ++++ C A G+ + +D + C + S L+ Y + IE A
Sbjct: 496 TFSSILNV-CAATNASMGQGKQFHGFAIKSRLDSSLC-----VSSALLTMYAKKGNIESA 549
Query: 291 IDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISS 350
+ F K D+V +N++I + + + V KEM+ V + T + ++
Sbjct: 550 EEVFKRQREK----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 351 LISQGRTDRAFEVFRRMIKICE--PDADTYTMMIKMFCERNEMDMAMKIWKDM 401
G + + F M++ C+ P + + M+ ++ +++ AMK+ ++M
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 28/284 (9%)
Query: 180 SRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSY 239
S + A +FD GR D ++Y LL G+ +D +A+ F + G D +
Sbjct: 40 SSRLYNAHNLFDKSPGR---DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIF 96
Query: 240 GIMVDI---LCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV-----LVHTYGVENRIEDAI 291
++ + LC E+ C+ F+ V LV TY + +D
Sbjct: 97 SSVLKVSATLCD--------ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR 148
Query: 292 DAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSL 351
F EM+ + +VV + LI + + + V + M++ G PNS T + L
Sbjct: 149 KVFDEMKER----NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVL 204
Query: 352 ISQGRTDRAFEVFRRMIK-ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSL 410
+G R +V ++K + +I ++ + + A ++ K V S+
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF----DKTEVKSV 260
Query: 411 HTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKLRQL 454
T++++I+G NG ++A + M +R S +F + +L
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 186 AQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG-CSPDVVSYGIMVD 244
A+ +F++ R D+ ++ L+ G+ K+ E F+ +++ C PD ++ ++
Sbjct: 58 ARHVFENFDIR--SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK 115
Query: 245 ILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSV-----LVHTYGVENRIEDAIDAFLEMER 299
GR E + M + + ++ V LV Y N E+++ F EM
Sbjct: 116 AYGALGR-----EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE 170
Query: 300 KGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDR 359
+ DV +N +I F ++ + + + MES+G PNS + V IS+ +R
Sbjct: 171 R----DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLER 226
Query: 360 AFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALIN 418
E+ R+ +K E D + ++ M+ + + +++A ++++ M K SL ++++I
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK----SLVAWNSMIK 282
Query: 419 GLCQNGNAMKACV-LLEEMIEKGIRPSRVTF 448
G G++ K+CV +L MI +G RPS+ T
Sbjct: 283 GYVAKGDS-KSCVEILNRMIIEGTRPSQTTL 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 122/268 (45%), Gaps = 24/268 (8%)
Query: 188 EIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC 247
++FD M R D+ +++ ++ + + KA E F M S+G P+ VS + +
Sbjct: 163 QVFDEMPER---DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACS 219
Query: 248 KAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
+ ++ E+ + ++ S LV YG + +E A + F +M RK + V
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL----V 275
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVII-----SSLISQGRTDRAFE 362
+N++I + K+ +L M G P+ T I+ S + G+ +
Sbjct: 276 AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY- 334
Query: 363 VFRRMIKICEPDADTYT--MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGL 420
V R ++ +AD Y +I ++ + E ++A ++ K+++ V +++ +I+
Sbjct: 335 VIRSVV-----NADIYVNCSLIDLYFKCGEANLAETVFS--KTQKDVA--ESWNVMISSY 385
Query: 421 CQNGNAMKACVLLEEMIEKGIRPSRVTF 448
GN KA + ++M+ G++P VTF
Sbjct: 386 ISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 134/303 (44%), Gaps = 14/303 (4%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V ++ V+ + ++ + ++A+ F M+ N + +SA + + + +EI
Sbjct: 172 DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIH 231
Query: 191 -DSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+K FE D S L++ +GK L ARE F++M +V++ M+
Sbjct: 232 RKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR----KSLVAWNSMIKGYVAK 287
Query: 250 GRVDEAVEVVKDMDDNNCMPT-SFIYSVLVHTYGVENRIEDA-IDAFLEMERKGIKADVV 307
G VE++ M P+ + + S+L+ N + I ++ R + AD+
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI--RSVVNADIY 345
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
V +LI + K + V + + + + + NV+ISS IS G +A EV+ +M
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKD----VAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 368 IKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
+ + +PD T+T ++ + ++ +I + R SAL++ + GN
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNE 461
Query: 427 MKA 429
+A
Sbjct: 462 KEA 464
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 202 KTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKD 261
+++++++ + N KA E + +MVS G PDVV++ ++ + +++ ++
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS 435
Query: 262 MDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANK 321
+ ++ + S L+ Y ++A F + +K DVV + +I A+ +
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQ 491
Query: 322 FKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI--CEPDADTYT 379
+ EM+ G+ P+ T ++S+ G D + F +M EP + Y+
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
Query: 380 MMIKMF 385
MI +
Sbjct: 552 CMIDIL 557
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 142 YARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPD 200
Y++ EA FN + K +++ ++ ++SA R+A FD M K +PD
Sbjct: 455 YSKCGNEKEAFRIFNSIPK----KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Query: 201 LKTYSILLEGWGKDPNLPKARETFREMVSA-GCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
T +L G + + + F +M S G P + Y M+DIL +AGR+ EA E++
Sbjct: 511 GVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII 570
Query: 260 K---DMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+ + DN + ++ + +H +E+ + D I L + D Y L +
Sbjct: 571 QQTPETSDNAELLSTLFSACCLH---LEHSLGDRIARLL---VENYPDDASTYMVLFNLY 624
Query: 317 CKANKFKNVRRVLKEMESNGV 337
+ RRV +M+ G+
Sbjct: 625 ASGESWDAARRVRLKMKEMGL 645
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 142/327 (43%), Gaps = 18/327 (5%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
+V T ++ YAR ++E V + M+ + N+ ++NG+LS +S ++A +F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 191 DSMKG-RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKA 249
+ F PD T S +L G L R ++ G D M+D+ K+
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 250 GRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVY 309
G V + + + M + + + + ++ A++ F + + ++ +VV +
Sbjct: 301 GHVYGIISLFNQFE----MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 310 NALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSL-----ISQGRTDRAFEVF 364
++I + K + +EM+ GV PN T ++ + + GR+ F V
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 365 RRMIKICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNG 424
++ + + +I M+ + ++++ ++ M +K V +++L+NG +G
Sbjct: 417 VHLLD----NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV----CWNSLMNGFSMHG 468
Query: 425 NAMKACVLLEEMIEKGIRPSRVTFGKL 451
A + + E ++ ++P ++F L
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSL 495
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
NV ++ YA+ +++ + FN+M +NL +N L++ ++ IF
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPT----KNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 191 DS-MKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA-GCSPDVVSYGIMVDILCK 248
+S M+ R +PD +++ LL G+ + + F+ M G P + Y MV++L +
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR 537
Query: 249 AGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRI---EDAIDAFLEMERKGIKAD 305
AG++ EA +++K+M P S ++ L+++ ++N + E A + +E +
Sbjct: 538 AGKLQEAYDLIKEMPFE---PDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 306 VVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPN 340
V++ N + + V + +MES G+ N
Sbjct: 595 VLLSN----IYAAKGMWTEVDSIRNKMESLGLKKN 625
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 20/273 (7%)
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILC-----KAGRV 252
+P + ++S L+ K ++ F M S G PD + + K G+
Sbjct: 78 DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQ 137
Query: 253 DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNAL 312
V V +D + +F+ + H Y R+ DA F M K DVV +AL
Sbjct: 138 IHCVSCVSGLDMD-----AFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSAL 188
Query: 313 IGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM--IKI 370
+ A+ + + V R+L EMES+G+ N + N I+S G A +F+++ +
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 371 CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKAC 430
C PD T + ++ + ++M I + + + SA+I+ ++G+
Sbjct: 249 C-PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 431 VLLE--EMIEKGIRPSRVTFGKLRQLLIKEKRE 461
L EM+E G+ + +T G R L+ + E
Sbjct: 308 SLFNQFEMMEAGVCNAYIT-GLSRNGLVDKALE 339
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 132/286 (46%), Gaps = 14/286 (4%)
Query: 165 QNLAAFNGLLSALCKSRNVRKAQEIFDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARET 223
++L ++N L++ K KA ++ M+ +PD T L+ +L + +E
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 224 FREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGV 283
+ + G + ++D+ K G + EA + +++ T ++ ++ Y
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYAR 335
Query: 284 ENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRT 343
++ + F +ME K DVV++NA+IG +A + ++ + +EM+++ P+ T
Sbjct: 336 CGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 344 CNVIISSLISQGRTDRAFEVFRRMIKIC-EPDADTYTMMIKMFCERNEMDMAMKIWKDMK 402
+S+ G D + R + K + T ++ M+ + + A+ ++ ++
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 403 SKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
++ + T++A+I GL +G+A A EMI+ GI P +TF
Sbjct: 452 TRNSL----TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 493
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 46/307 (14%)
Query: 176 ALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCS-- 233
AL +SR + + +I +KG P++ ++++ + G+ + N ++ +++M+ GC
Sbjct: 96 ALSESRYLDYSVKI---LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCES 152
Query: 234 -PDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAID 292
PD +Y ++ + ++ + S +++ +H + +E+A
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 293 AFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLI 352
F E + D+V +N LI + K + + V K MES GV P+ T ++SS
Sbjct: 213 VFDESPVR----DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 268
Query: 353 SQGRTDRAFEVF--------RRMIKICEPDAD------------------------TYTM 380
G +R E + R I + D ++T
Sbjct: 269 MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 328
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
MI + +D++ K++ DM+ K V ++A+I G Q A L +EM
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDVV----LWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 441 IRPSRVT 447
+P +T
Sbjct: 385 TKPDEIT 391
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 148 VDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSIL 207
+D ++ ++KY + N+A L+ K N+ +A +F ++ R + TY+ +
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR---NSLTYTAI 461
Query: 208 LEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDN-N 266
+ G + A F EM+ AG +PD +++ ++ C G + + M N
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 267 CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI 313
P YS++V G +E+A D ME ++AD V+ AL+
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEA-DRL--MESMPMEADAAVWGALL 565
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIF 190
N T+ ++ A A+ FN M + + F GLLSA C ++ ++ F
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
Query: 191 DSMKGRF--EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
MK RF P LK YSI+++ G+ L +A R M S D +G ++
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEAD---RLMESMPMEADAAVWGALLFGCRM 570
Query: 249 AGRV---DEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
G V ++A + + ++D ++ S IY +L YG N EDA A M +G++
Sbjct: 571 HGNVELGEKAAKKLLELDPSD----SGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 162/425 (38%), Gaps = 95/425 (22%)
Query: 100 AYHLMIESLARIRQYQIMWDIVTKMRNKG-MLNVETFCIVMRKYARAHKVDEAVYTFNVM 158
+Y +I+ A+ Q+ ++ +MRN G MLN T V+ + + + ++
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 159 DKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLP 218
K ++ + LL C ++ A+++FD M E +L T++++L G+ K +
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP---ERNLVTWNVMLNGYSKAGLIE 256
Query: 219 KARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPT-------- 270
+A E F ++ D+VS+G M+D + ++DEA+ +M P+
Sbjct: 257 QAEELFDQITE----KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 271 ---------------------------SFIYSVLVHTYGVENRIEDAIDAFLEMERKGIK 303
F+ + ++H Y V N I+ A+ F +K
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF----EASVK 368
Query: 304 ADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEV 363
+ NALI F K + R V + + + N +IS A +
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF----SWNAMISGYAQSLSPQLALHL 424
Query: 364 FRRMIKICEPDADTYTM-------------------------------------MIKMFC 386
FR MI + D TM +I M+
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 387 ERNEMDMAMKIW---KDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRP 443
+ ++ A+ I+ K++ S P ++A+I G +G+A A L ++ I+P
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 444 SRVTF 448
+ +TF
Sbjct: 541 NSITF 545
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 51/304 (16%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRF 197
V+ YA+ + +A F K + A+FN ++ +SR + A ++FD M
Sbjct: 82 VLNMYAKCRLLADAESVFRDHAKLDS----ASFNIMVDGYVRSRRLWDALKLFDVMP--- 134
Query: 198 EPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVE 257
E +Y+ L++G+ ++ +A E FREM + GIM+
Sbjct: 135 ERSCVSYTTLIKGYAQNNQWSEAMELFREM---------RNLGIML-------------- 171
Query: 258 VVKDMDDNNCMPTSFIYSVLVHTYGVEN-RIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
N + + + S H G+ + R+ ++ L++E + V V L+ +
Sbjct: 172 --------NEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGR-----VFVSTNLLHMY 218
Query: 317 CKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDAD 376
C K+ R++ EM N T NV+++ G ++A E+F +I E D
Sbjct: 219 CLCLCLKDARKLFDEMPER----NLVTWNVMLNGYSKAGLIEQAEELFD---QITEKDIV 271
Query: 377 TYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEM 436
++ MI +N++D A+ + +M PS L++ ++ + K L +
Sbjct: 272 SWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTI 331
Query: 437 IEKG 440
+++G
Sbjct: 332 VKRG 335
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 196 RFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEA 255
R EPD+ Y+ +L + A +++ G P V+YG++++++ + +
Sbjct: 588 RLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLV 647
Query: 256 VEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGA 315
E + M + +P + Y VLV+T E + ++A+ +ME +GI +Y L
Sbjct: 648 HEFFRKMQ-KSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARC 706
Query: 316 FCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDA 375
C A + +LK++ P T +I + + G A +F +M K+C P+
Sbjct: 707 LCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNL 766
Query: 376 DTYTMMIKMFCERNEMDMAMKIWKDMK------------SKRFVPSLHTFSALINGLCQN 423
T +M+K + + + A ++++ M R +P +TF+ +++ +
Sbjct: 767 VTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQ 826
Query: 424 GNAMKACVLLEEMIEKG 440
EM+ G
Sbjct: 827 EKWDDFGYAYREMLRHG 843
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 27/254 (10%)
Query: 204 YSILLEGWGKDPNLPKARETFREMV-SAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
Y+ L GK +A F M+ PD+V+Y + L +AG + E V+ M
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTM 569
Query: 263 DD---NNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKA 319
PT+ LE ++ DVVVYNA++ A +
Sbjct: 570 RSPPKKKFKPTT-----------------------LEKWDPRLEPDVVVYNAVLNACVQR 606
Query: 320 NKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYT 379
+++ VL++++ G P+ T +I+ +++ + + E FR+M K P+A Y
Sbjct: 607 KQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYR 666
Query: 380 MMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEK 439
+++ + + D A+ +DM+S+ V S + L LC G + +L+++
Sbjct: 667 VLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRV 726
Query: 440 GIRPSRVTFGKLRQ 453
+P VT+ L Q
Sbjct: 727 ANKPLVVTYTGLIQ 740
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 118/265 (44%), Gaps = 15/265 (5%)
Query: 90 RQRNYAHTVRAYHLMIESLARIRQYQIMWDIVTKMRNKGMLNVETFCIVMRKYARAHKVD 149
+QR + Y L++E + +Y ++ + KM+ + N + +++ + K D
Sbjct: 620 KQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSD 679
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILL 208
EAV+T M+ + + A + L LC + + + + + +P + TY+ L+
Sbjct: 680 EAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLI 739
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM-DDNN- 266
+ N+ A F +M CSP++V+ IM+ + G +EA E+ + M +D N
Sbjct: 740 QACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNH 798
Query: 267 ----------CMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAF 316
+P ++ ++ ++ T + + +D A+ EM R G + + ++
Sbjct: 799 IKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEA 858
Query: 317 CKANKFKNVRRVLKEM-ESNGVTPN 340
+A K + + + M SN + P+
Sbjct: 859 SRAGKEEVMEATWEHMRRSNRIPPS 883
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 145/308 (47%), Gaps = 30/308 (9%)
Query: 147 KVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSI 206
++ V D V +L F G+ +SRN A ++F M R D+ +++
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCG---ESRN---ACKVFGEMPVR---DVVSWTG 177
Query: 207 LLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNN 266
++ G+ + +A +TF +M P++ +Y V +L +GRV + + K +
Sbjct: 178 IITGFTRTGLYKEALDTFSKM---DVEPNLATY---VCVLVSSGRVG-CLSLGKGIHGLI 230
Query: 267 CMPTSFIY----SVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
S I + L+ Y ++ DA+ F E+E+K D V +N++I +
Sbjct: 231 LKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKK----DKVSWNSMISGLVHCERS 286
Query: 323 KNVRRVLKEME-SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTM 380
K + M+ S+G+ P+ ++S+ S G D V ++ + D T
Sbjct: 287 KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTA 346
Query: 381 MIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKG 440
++ M+ + ++ A++I+ ++SK ++ T++AL+ GL +G+ +++ EEM++ G
Sbjct: 347 IVDMYAKCGYIETALEIFNGIRSK----NVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Query: 441 IRPSRVTF 448
+P+ VTF
Sbjct: 403 FKPNLVTF 410
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 124 MRNKGMLNVETFCIVMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNV 183
++ ++++ET ++ Y + ++ +A+ F ++K ++ ++N ++S L
Sbjct: 231 LKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK----KDKVSWNSMISGLVHCERS 286
Query: 184 RKAQEIFDSMK--GRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGI 241
++A ++F M+ +PD + +L + R +++AG D
Sbjct: 287 KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTA 346
Query: 242 MVDILCKAGRVDEAVEVVKDMDDNNCMP-TSFIYSVLVHTYGVENRIEDAIDAFLEMERK 300
+VD+ K G ++ A+E+ + N + + + +H +G+E ++ F EM +
Sbjct: 347 IVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLE-----SLRYFEEMVKL 401
Query: 301 GIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN--GVTPNSRTCNVIISSLISQGRTD 358
G K ++V + A + A C RR +M+S + P +I L G D
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
Query: 359 RAFEVFRRM-----IKIC 371
A E+ + M ++IC
Sbjct: 462 EALELVKAMPVKPDVRIC 479
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 138 VMRKYARAHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGR 196
++ YA+ ++ A+ FN + +N+ +N LL L + ++ F+ M K
Sbjct: 347 IVDMYAKCGYIETALEIFNGIRS----KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Query: 197 FEPDLKTYSILLEGWGKDPNLPKARETFREMVS--AGCSPDVVSYGIMVDILCKAGRVDE 254
F+P+L T+ L + + R F +M S P + YG M+D+LC+AG +DE
Sbjct: 403 FKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDE 462
Query: 255 AVEVVKDM----DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYN 310
A+E+VK M D C I S + + ++ +D+FL++E + D VY
Sbjct: 463 ALELVKAMPVKPDVRIC---GAILSACKNRGTLMELPKEILDSFLDIEFE----DSGVYV 515
Query: 311 ALIGAFCKANKFKNVRRVLKEMESNGVT--PNS 341
L F ++ +V R+ + M+ G++ P S
Sbjct: 516 LLSNIFAANRRWDDVARIRRLMKVKGISKVPGS 548
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 143/339 (42%), Gaps = 54/339 (15%)
Query: 150 EAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE-PDLKTYSILL 208
+AV + ++ V +N + ++ K + KA+E+F+ M FE ++K +S++L
Sbjct: 127 DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMP--FELKNVKAWSVML 184
Query: 209 EGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCM 268
+ + + AR+ F ++ + + +M+ + G V EA + + + +
Sbjct: 185 GVYVNNRKMEDARKFFEDIPE----KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 269 PTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV--------------------- 307
I++ L+ Y +DAIDAF M+ +G + D V
Sbjct: 241 ----IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 308 --------------VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
V NALI + K +N V + + V CN +IS L
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA----CCNSMISCLAI 352
Query: 354 QGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHT 412
G+ A E+F M + +PD T+ ++ + +KI+ +MK++ P++
Sbjct: 353 HGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKH 412
Query: 413 FSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
F LI+ L ++G +A L++EM ++P+ G L
Sbjct: 413 FGCLIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGAL 448
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 13/240 (5%)
Query: 131 NVETFCIVMRKYARAHKVDEAVYTFNVMDKYEV-PQNLAAFNGLLSALCKSRNVRKAQEI 189
N + ++M Y R V EA F Y V ++L +N L++ ++ A +
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIF-----YRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 190 FDSMKGR-FEPDLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCK 248
F +M+G +EPD T S +L + L RE + G + ++D+ K
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 249 AGRVDEAVEVVKDMDDNNCMP-TSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVV 307
G ++ A V + + + S I + +H G ++A++ F ME +K D +
Sbjct: 322 CGDLENATSVFESISVRSVACCNSMISCLAIHGKG-----KEALEMFSTMESLDLKPDEI 376
Query: 308 VYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRM 367
+ A++ A ++ EM++ V PN + +I L G+ A+ + + M
Sbjct: 377 TFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 132/285 (46%), Gaps = 17/285 (5%)
Query: 171 NGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSA 230
N LL K ++ A+ +F M R + +Y+ ++ G+ ++ +A + F EM
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDR---SVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 231 GCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIEDA 290
G SPDV + +++ + +DE V + + +N+ F+ + L+ Y +++A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 291 IDAFLEMERKGIKADVVVYNALIGAF---CKANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
F EM K D++ +N +IG + C AN+ ++ +L +E +P+ RT +
Sbjct: 452 ELVFSEMRVK----DIISWNTIIGGYSKNCYANEALSLFNLL--LEEKRFSPDERTVACV 505
Query: 348 ISSLISQGRTDRAFEVFRRMIKICE-PDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRF 406
+ + S D+ E+ +++ D ++ M+ + + +A ++ D+ SK
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Query: 407 VPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
V +++ +I G +G +A L +M + GI ++F L
Sbjct: 566 V----SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 116/264 (43%), Gaps = 11/264 (4%)
Query: 157 VMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGKDP 215
V D+ ++ + L +N L++ L KS + + +F M E D T+S + + +
Sbjct: 151 VFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 216 NLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYS 275
++ + ++ +G +V K RVD A +V +M + + + ++
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS----WN 265
Query: 276 VLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESN 335
+++ Y E + F++M GI+ D+ ++ A C ++ ++ R + +
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF-AGCADSRLISLGRAVHSIGVK 324
Query: 336 G-VTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTMMIKMFCERNEMDMA 394
+ R CN ++ G D A VFR M + +YT MI + A
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM---SDRSVVSYTSMIAGYAREGLAGEA 381
Query: 395 MKIWKDMKSKRFVPSLHTFSALIN 418
+K++++M+ + P ++T +A++N
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLN 405
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 144 RAHKVDEAVYTFNVMDKYEVPQ-NLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLK 202
+ V+E++Y +++ K N+ NG S + ++ N Q S + F+P
Sbjct: 471 KGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQA---SKRFCFKPTTA 527
Query: 203 TYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDM 262
TY+ILL+ G D + +E EM S G SP+ +++ ++D+ +G V+ AV +++ M
Sbjct: 528 TYNILLKACGTD--YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTM 585
Query: 263 DDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKF 322
P Y+ + ++ A F EM R IK + V YN L+ A K
Sbjct: 586 HSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSL 645
Query: 323 KNVRRVL---KEMESNGVTPN 340
VR+ L ++M + G PN
Sbjct: 646 LEVRQCLAIYQDMRNAGYKPN 666
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 161/356 (45%), Gaps = 37/356 (10%)
Query: 100 AYHLMIES---LARIRQYQIMWDIVTKMRNKGMLNVE--TFCIVMRKYARAHKVDEAVYT 154
+Y++++++ R+ Q ++ +M + G+L ++ T+C +++ +A A A+
Sbjct: 337 SYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKV 396
Query: 155 FNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSM-KGRFEPDLKTYSILLEGWGK 213
+ M V N ++ L+SA + V +A +F+ M EP+ + ++ILL +
Sbjct: 397 KDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVE 456
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
+A F+ + V+ + D + GR + ++K N P S +
Sbjct: 457 ACQYDRAFRLFQSWKGSS-----VNESLYADDIVSKGRT-SSPNILK-----NNGPGSLV 505
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERK-GIKADVVVYNALIGAFCKANKFKNVRRVLKEM 332
NR ++ +++ ++ K YN L+ A C + ++ + ++ EM
Sbjct: 506 -----------NRNSNS--PYIQASKRFCFKPTTATYNILLKA-CGTDYYRG-KELMDEM 550
Query: 333 ESNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKI-CEPDADTYTMMIKMFCERNEM 391
+S G++PN T + +I G + A + R M PD YT IK+ E +
Sbjct: 551 KSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCL 610
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAM--KACV-LLEEMIEKGIRPS 444
+A ++++M+ + P+ T++ L+ + G+ + + C+ + ++M G +P+
Sbjct: 611 KLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 294 FLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLIS 353
+ ++ ++ IK ++ V N+L+ ++ +V K M+ VT + + N+++ +
Sbjct: 290 YEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCL 347
Query: 354 QGRTDRAFEVFRRMIK-----ICEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVP 408
GR D A ++++ + + + DA TY +IK+F + A+K+ DMKS P
Sbjct: 348 AGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTP 407
Query: 409 SLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTFGKL 451
+ HT+S+LI+ G +A L EEM+ G P+ F L
Sbjct: 408 NTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 57/327 (17%)
Query: 172 GLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDPNLPKARETFREMVSAG 231
GL KSR + + D +K +P++ + L+ D L + ++ M
Sbjct: 278 GLCGDYVKSRYIYE-----DLLKENIKPNIYVINSLMNVNSHD--LGYTLKVYKNMQILD 330
Query: 232 CSPDVVSYGIMVDILCKAGRVDEAVEVVKD---MDDNNCMP-TSFIYSVLVHTYGVENRI 287
+ D+ SY I++ C AGRVD A ++ K+ M+ + + +F Y ++ +
Sbjct: 331 VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMW 390
Query: 288 EDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVI 347
+ A+ +M+ G+ + +++LI A A + + +EM ++G PNS+ N++
Sbjct: 391 KWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Query: 348 ISSLISQGRTDRAFEVFR-------------------------RMIKICEPDA------- 375
+ + + + DRAF +F+ ++K P +
Sbjct: 451 LHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSN 510
Query: 376 DTYTMMIKMFCER--------------NEMDMAMKIWKDMKSKRFVPSLHTFSALINGLC 421
Y K FC + + ++ +MKS P+ T+S LI+
Sbjct: 511 SPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCG 570
Query: 422 QNGNAMKACVLLEEMIEKGIRPSRVTF 448
+G+ A +L M G RP V +
Sbjct: 571 GSGDVEGAVRILRTMHSAGTRPDVVAY 597
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 135/325 (41%), Gaps = 20/325 (6%)
Query: 145 AHKVDEAVYTFNVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMK-----GRFEP 199
+H + + + M +V ++ ++N LL C + V AQ+I+ K G +
Sbjct: 313 SHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKL 372
Query: 200 DLKTYSILLEGWGKDPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVV 259
D TY +++ + A + +M S G +P+ ++ ++ AG V++A +
Sbjct: 373 DAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLF 432
Query: 260 KDMDDNNCMPTSFIYSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALI---GAF 316
++M + C P S +++L+H + + A F KG + +Y I G
Sbjct: 433 EEMLASGCEPNSQCFNILLHACVEACQYDRAFRLF--QSWKGSSVNESLYADDIVSKGRT 490
Query: 317 CKANKFKN---VRRVLKEMESNGVTPNSRTC----NVIISSLISQGRTD--RAFEVFRRM 367
N KN V + S + + R C + L+ TD R E+ M
Sbjct: 491 SSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEM 550
Query: 368 IKI-CEPDADTYTMMIKMFCERNEMDMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNA 426
+ P+ T++ +I M +++ A++I + M S P + ++ I +N
Sbjct: 551 KSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCL 610
Query: 427 MKACVLLEEMIEKGIRPSRVTFGKL 451
A L EEM I+P+ VT+ L
Sbjct: 611 KLAFSLFEEMRRYQIKPNWVTYNTL 635
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 135/297 (45%), Gaps = 22/297 (7%)
Query: 156 NVMDKYEVPQNLAAFNGLLS--ALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGK 213
N ++K + ++ N L+ + C VR A ++F+ M R D +++ +L G K
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER---DTVSWNSMLGGLVK 197
Query: 214 DPNLPKARETFREMVSAGCSPDVVSYGIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFI 273
L AR F EM D++S+ M+D + + +A E+ + M + N +
Sbjct: 198 AGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVS---- 249
Query: 274 YSVLVHTYGVENRIEDAIDAFLEMERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEME 333
+S +V Y +E A F +M +VV + +I + + K R++ +M
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 334 SNGVTPNSRTCNVIISSLISQGRTDRAFEVFRRMIKICEPDADTYTM--MIKMFCERNEM 391
++G+ ++ I+++ G + ++K ++ Y + ++ M+ + +
Sbjct: 308 ASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 392 DMAMKIWKDMKSKRFVPSLHTFSALINGLCQNGNAMKACVLLEEMIEKGIRPSRVTF 448
A ++ D+ K V +++ +++GL +G+ +A L M +GIRP +VTF
Sbjct: 367 KKAFDVFNDIPKKDLV----SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 110/265 (41%), Gaps = 57/265 (21%)
Query: 156 NVMDKYEVPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDLKTYSILLEGWGKDP 215
+++ + + N N LL K N++KA ++F+ + + DL +++ +L G G
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK---DLVSWNTMLHGLGVHG 395
Query: 216 NLPKARETFREMVSAGCSPDVVS------------------------------------Y 239
+ +A E F M G PD V+ Y
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHY 455
Query: 240 GIMVDILCKAGRVDEAVEVVKDMDDNNCMPTSFIYSVLVHTYGVENRIE---DAIDAFLE 296
G +VD+L + GR+ EA++VV+ M P I+ L+ + N ++ + +D ++
Sbjct: 456 GCLVDLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALLGACRMHNEVDIAKEVLDNLVK 512
Query: 297 MERKGIKADVVVYNALIGAFCKANKFKNVRRVLKEMESNGVTPNSRTCNVIISSLI---- 352
++ D Y+ L + A ++ V + +M+S GV S +V + I
Sbjct: 513 LD----PCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFT 568
Query: 353 ----SQGRTDRAFEVFRRMIKICEP 373
S ++D+ +++ +I+ +P
Sbjct: 569 VFDKSHPKSDQIYQMLGSLIEPPDP 593