Miyakogusa Predicted Gene
- Lj1g3v0874340.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0874340.2 tr|B9IAZ0|B9IAZ0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_834991 PE=4
SV=1,29.62,0.00000000005,seg,NULL,CUFF.26460.2
(392 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21660.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 60 3e-09
>AT1G21660.1 | Symbols: | Chaperone DnaJ-domain superfamily
protein | chr1:7605924-7608835 FORWARD LENGTH=523
Length = 523
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 33/36 (91%)
Query: 1 MDEFGVLTERYGLKPQGKSAPMASSKRSNHDSGSNL 36
MDEFGVLTERYG+KPQGKSAPMA+SKR+ +++G +
Sbjct: 1 MDEFGVLTERYGIKPQGKSAPMAASKRNPNNNGQSW 36