Miyakogusa Predicted Gene

Lj1g3v0874250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0874250.1 Non Chatacterized Hit- tr|I3T671|I3T671_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,LEADERPTASE,Peptidase S26A, signal peptidase I;
Peptidase_S24,Peptidase S24/S26A/S26B; SPASE_I_1,Pep,CUFF.26450.1
         (193 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24590.1 | Symbols: PLSP1 | plastidic type i signal peptidase...   166   9e-42
AT2G30440.1 | Symbols: TPP | thylakoid processing peptide | chr2...   162   2e-40
AT1G06870.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...   159   2e-39
AT1G23465.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...    64   8e-11
AT1G29960.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...    58   4e-09
AT1G53530.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...    52   2e-07
AT1G53530.2 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...    50   7e-07

>AT3G24590.1 | Symbols: PLSP1 | plastidic type i signal peptidase 1
           | chr3:8970694-8972020 FORWARD LENGTH=291
          Length = 291

 Score =  166 bits (420), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 85/154 (55%), Positives = 105/154 (68%), Gaps = 3/154 (1%)

Query: 42  LVVGLLWSTF-SELRSIPSSSMFPTLRVADRIIVEKASYYFRSPAIHEIVTFRDPTQLS- 99
           + V L +  F +E R IPS SM+PT  V DR++ EK SYYFR P  ++IV F+ P  L  
Sbjct: 122 IAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQE 181

Query: 100 -GDNPDVVFIKRVVAKEGDTVEVHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYV 158
            G     VFIKR+VAKEGD VEVH+G+L +NGVA+ E FI E P Y +    VP+  V+V
Sbjct: 182 VGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFV 241

Query: 159 LGDNRNNSYDSHVWGPLPVKNIIGRYVMCFHRPT 192
           +GDNRNNSYDSHVWGPLP+KNIIGR V  +  P 
Sbjct: 242 MGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPN 275


>AT2G30440.1 | Symbols: TPP | thylakoid processing peptide |
           chr2:12973244-12975027 FORWARD LENGTH=340
          Length = 340

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/162 (48%), Positives = 110/162 (67%), Gaps = 5/162 (3%)

Query: 37  GFLRLLVVGLLWSTFSELRSIPSSSMFPTLRVADRIIVEKASYYFRSPAIHEIVTFRDPT 96
            F  + V  L  S  +E +SIPS+SM+PTL   DR++ EK SY+FR P + +IV F+ P 
Sbjct: 160 AFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPP 219

Query: 97  QL-----SGDNPDVVFIKRVVAKEGDTVEVHHGRLYINGVAQEEDFIAEQPAYTVKSTYV 151
            L      G + + VFIKR+VA EGD VEV  G+L++N + QEEDF+ E  +Y ++  +V
Sbjct: 220 ILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFV 279

Query: 152 PKGHVYVLGDNRNNSYDSHVWGPLPVKNIIGRYVMCFHRPTN 193
           PKG+V+VLGDNRN S+DSH WGPLP++NI+GR V  +  P+ 
Sbjct: 280 PKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSK 321


>AT1G06870.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr1:2108832-2110642 FORWARD LENGTH=367
          Length = 367

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/159 (50%), Positives = 105/159 (66%), Gaps = 2/159 (1%)

Query: 37  GFLRLLVVGLLWSTFSELRSIPSSSMFPTLRVADRIIVEKASYYFRSPAIHEIVTFRDPT 96
            F  + V  L  S  +E +SIPS+SM PTL V DR+I EK SY+FR P + +IV F+ P 
Sbjct: 190 AFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPP 249

Query: 97  QL--SGDNPDVVFIKRVVAKEGDTVEVHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKG 154
            L   G +   VFIKR+VA EGD VEV  G+L +N   Q EDF+ E   Y ++  +VP+G
Sbjct: 250 ILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEG 309

Query: 155 HVYVLGDNRNNSYDSHVWGPLPVKNIIGRYVMCFHRPTN 193
           +V+VLGDNRN S+DSH WGPLP+KNIIGR V  +  P+ 
Sbjct: 310 YVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSK 348


>AT1G23465.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr1:8330055-8330938 FORWARD LENGTH=155
          Length = 155

 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 21/124 (16%)

Query: 61  SMFPTLR-VADRIIVEKASYYFRSPAIHEIVTFRDPTQLSGDNPDVVFIKRVVAKEGDTV 119
           SM PTL    + ++ E+ S  ++ P+  +IV  R P     +NP+   IKRVV  EGD +
Sbjct: 47  SMIPTLHPSGNMLLAERISKRYQKPSRGDIVVIRSP-----ENPNKTPIKRVVGVEGDCI 101

Query: 120 EVHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYVLGDNRNNSYDSHVWGPLPVKN 179
                   I+ V  +E           ++  VPKGHV+V GD  +NS DS  +GP+P   
Sbjct: 102 S-----FVIDPVKSDES----------QTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGL 146

Query: 180 IIGR 183
           I GR
Sbjct: 147 IQGR 150


>AT1G29960.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr1:10494813-10495851 FORWARD LENGTH=169
          Length = 169

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 21/124 (16%)

Query: 61  SMFPTLRVADRIIV-EKASYYFRSPAIHEIVTFRDPTQLSGDNPDVVFIKRVVAKEGDTV 119
           SM PTL  +  +++ E+ S  ++ P+  +IV  R P     +NP+   IKRV+  EGD +
Sbjct: 47  SMTPTLHPSGNVLLAERISKRYQKPSRGDIVVIRSP-----ENPNKTPIKRVIGIEGDCI 101

Query: 120 EVHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYVLGDNRNNSYDSHVWGPLPVKN 179
                   I+    +E           ++  VPKGHV+V GD  +NS DS  +G +P   
Sbjct: 102 S-----FVIDSRKSDES----------QTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGL 146

Query: 180 IIGR 183
           I GR
Sbjct: 147 IQGR 150


>AT1G53530.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr1:19978249-19979778 FORWARD LENGTH=168
          Length = 168

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 21/127 (16%)

Query: 61  SMFPTLRV-ADRIIVEKASYYFRSPAIHEIVTFRDPTQLSGDNPDVVFIKRVVAKEGDTV 119
           SM PTL +  D I+ E  S+ F    + ++V  R P      +P  +  KR++  EGD  
Sbjct: 50  SMLPTLNLTGDVILAEHLSHRFGKIGLGDVVLVRSPR-----DPKRMVTKRILGLEGD-- 102

Query: 120 EVHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYVLGDNRNNSYDSHVWGPLPVKN 179
                RL  +     +  + +       S  VPKGHV++ GDN   S DS  +GP+P   
Sbjct: 103 -----RLTFSA----DPLVGDASV----SVLVPKGHVWIQGDNLYASTDSRHFGPVPYSL 149

Query: 180 IIGRYVM 186
           I G+ ++
Sbjct: 150 IEGKALL 156


>AT1G53530.2 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr1:19978488-19979778 FORWARD LENGTH=118
          Length = 118

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 21/126 (16%)

Query: 62  MFPTLRV-ADRIIVEKASYYFRSPAIHEIVTFRDPTQLSGDNPDVVFIKRVVAKEGDTVE 120
           M PTL +  D I+ E  S+ F    + ++V  R P      +P  +  KR++  EGD + 
Sbjct: 1   MLPTLNLTGDVILAEHLSHRFGKIGLGDVVLVRSPR-----DPKRMVTKRILGLEGDRLT 55

Query: 121 VHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYVLGDNRNNSYDSHVWGPLPVKNI 180
                         +  + +       S  VPKGHV++ GDN   S DS  +GP+P   I
Sbjct: 56  F-----------SADPLVGDASV----SVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLI 100

Query: 181 IGRYVM 186
            G+ ++
Sbjct: 101 EGKALL 106