Miyakogusa Predicted Gene

Lj1g3v0841410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0841410.1 tr|B7FJZ6|B7FJZ6_MEDTR Delta-aminolevulinic acid
dehydratase OS=Medicago truncatula PE=2
SV=1,88.06,0,ALAD,Porphobilinogen synthase; no
description,Aldolase-type TIM barrel;
D_ALA_DEHYDRATASE,Porphobili,CUFF.26428.1
         (399 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69740.2 | Symbols: HEMB1 | Aldolase superfamily protein | ch...   590   e-169
AT1G69740.1 | Symbols: HEMB1 | Aldolase superfamily protein | ch...   590   e-169
AT1G44318.1 | Symbols: hemb2 | Aldolase superfamily protein | ch...   471   e-133

>AT1G69740.2 | Symbols: HEMB1 | Aldolase superfamily protein |
           chr1:26232197-26234713 FORWARD LENGTH=430
          Length = 430

 Score =  590 bits (1521), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 279/305 (91%), Positives = 294/305 (96%)

Query: 94  RSAFQETTISPGHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVV 153
           R+AFQET ISP +FVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKAR VGVNS+V
Sbjct: 118 RAAFQETDISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARAVGVNSIV 177

Query: 154 LFPKIPDALKTPTGDEAYSENGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRE 213
           LFPK+P+ALK  TGDEAY++NGLVPR IRLLKDKYPDL+IYTDVALDPYSSDGHDGIVRE
Sbjct: 178 LFPKVPEALKNSTGDEAYNDNGLVPRTIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVRE 237

Query: 214 DGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTA 273
           DGVIMNDETVHQLCKQAV+QARAGADVVSPSDMMDGRVGAIR+ALDAEGFQ+VSIMSYTA
Sbjct: 238 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRSALDAEGFQNVSIMSYTA 297

Query: 274 KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPALPYL 333
           KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREAL E REDE+EGADILLVKP LPYL
Sbjct: 298 KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALIEAREDEAEGADILLVKPGLPYL 357

Query: 334 DVIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADVILTYF 393
           D+IRLLRD SPLPIAAYQVSGEYSMIKAGG LKMIDEEKVMMESL+CLRRAGAD+ILTYF
Sbjct: 358 DIIRLLRDKSPLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAGADIILTYF 417

Query: 394 ALQAA 398
           ALQAA
Sbjct: 418 ALQAA 422


>AT1G69740.1 | Symbols: HEMB1 | Aldolase superfamily protein |
           chr1:26232197-26234713 FORWARD LENGTH=430
          Length = 430

 Score =  590 bits (1521), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 279/305 (91%), Positives = 294/305 (96%)

Query: 94  RSAFQETTISPGHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVV 153
           R+AFQET ISP +FVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKAR VGVNS+V
Sbjct: 118 RAAFQETDISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARAVGVNSIV 177

Query: 154 LFPKIPDALKTPTGDEAYSENGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRE 213
           LFPK+P+ALK  TGDEAY++NGLVPR IRLLKDKYPDL+IYTDVALDPYSSDGHDGIVRE
Sbjct: 178 LFPKVPEALKNSTGDEAYNDNGLVPRTIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVRE 237

Query: 214 DGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTA 273
           DGVIMNDETVHQLCKQAV+QARAGADVVSPSDMMDGRVGAIR+ALDAEGFQ+VSIMSYTA
Sbjct: 238 DGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRSALDAEGFQNVSIMSYTA 297

Query: 274 KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPALPYL 333
           KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREAL E REDE+EGADILLVKP LPYL
Sbjct: 298 KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALIEAREDEAEGADILLVKPGLPYL 357

Query: 334 DVIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADVILTYF 393
           D+IRLLRD SPLPIAAYQVSGEYSMIKAGG LKMIDEEKVMMESL+CLRRAGAD+ILTYF
Sbjct: 358 DIIRLLRDKSPLPIAAYQVSGEYSMIKAGGVLKMIDEEKVMMESLMCLRRAGADIILTYF 417

Query: 394 ALQAA 398
           ALQAA
Sbjct: 418 ALQAA 422


>AT1G44318.1 | Symbols: hemb2 | Aldolase superfamily protein |
           chr1:16831016-16833916 FORWARD LENGTH=406
          Length = 406

 Score =  471 bits (1212), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 225/305 (73%), Positives = 262/305 (85%), Gaps = 6/305 (1%)

Query: 94  RSAFQETTISPGHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVV 153
           R+AFQET ISP +F+YPLFIHEGE D PI +MPG Y LGWRHGL++EVA+A DVGVNSV 
Sbjct: 95  RAAFQETNISPANFIYPLFIHEGEVDIPITSMPGRYMLGWRHGLIEEVARALDVGVNSVK 154

Query: 154 LFPKIPDALKTPTGDEAYSENGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVRE 213
           L+PK+P+ALK+PTG+EA+++NGL+PR +RLLKD++PDLVIYTDV  D YS+ GH GIV E
Sbjct: 155 LYPKVPEALKSPTGEEAFNDNGLIPRTVRLLKDRFPDLVIYTDVNFDEYSTTGHGGIVGE 214

Query: 214 DGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTA 273
           DGVI+NDET+HQL KQAV+QARAGADVV  S+M+DGRVGA+RAALDAEGFQ VSIMSY+ 
Sbjct: 215 DGVILNDETIHQLRKQAVSQARAGADVVCTSEMLDGRVGAVRAALDAEGFQDVSIMSYSV 274

Query: 274 KYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPALPYL 333
           KY SS YG FR+         DKKTYQ+NPAN REAL E REDE+EGADIL+VKPALP L
Sbjct: 275 KYTSSLYGRFRKVQ------LDKKTYQINPANSREALLEAREDEAEGADILMVKPALPSL 328

Query: 334 DVIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADVILTYF 393
           D+IRLL++ + LPI A QVSGEYSMIKA G LKMIDEEKVMMESLLC+RRAGAD+ILTYF
Sbjct: 329 DIIRLLKNQTLLPIGACQVSGEYSMIKAAGLLKMIDEEKVMMESLLCIRRAGADLILTYF 388

Query: 394 ALQAA 398
           ALQAA
Sbjct: 389 ALQAA 393