Miyakogusa Predicted Gene

Lj1g3v0827060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0827060.1 Non Chatacterized Hit- tr|I1KAA7|I1KAA7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7568 PE=,88.98,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; DNA polymerase III
clamp loader subunits,,CUFF.26380.1
         (372 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77470.1 | Symbols: RFC3, RFC5 | replication factor C subunit...   566   e-162
AT1G63160.1 | Symbols: RFC2 | replication factor C 2 | chr1:2342...   219   3e-57
AT1G21690.3 | Symbols: EMB1968 | ATPase family associated with v...   212   3e-55
AT1G21690.1 | Symbols: EMB1968, RFC4 | ATPase family associated ...   212   3e-55
AT1G21690.4 | Symbols: EMB1968 | ATPase family associated with v...   207   1e-53
AT1G21690.2 | Symbols: EMB1968, RFC4 | ATPase family associated ...   206   2e-53
AT5G27740.1 | Symbols: EMB161, EMB2775, EMB251, RFC3 | ATPase fa...   130   1e-30
AT1G24290.1 | Symbols:  | AAA-type ATPase family protein | chr1:...    72   6e-13
AT5G22010.1 | Symbols: AtRFC1, RFC1 | replication factor C1 | ch...    70   3e-12
AT1G14460.1 | Symbols:  | AAA-type ATPase family protein | chr1:...    66   3e-11
AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein | ch...    64   2e-10
AT5G45720.2 | Symbols:  | AAA-type ATPase family protein | chr5:...    63   3e-10
AT5G45720.1 | Symbols:  | AAA-type ATPase family protein | chr5:...    63   3e-10
AT4G24790.2 | Symbols:  | AAA-type ATPase family protein | chr4:...    61   1e-09
AT4G24790.1 | Symbols:  | AAA-type ATPase family protein | chr4:...    61   1e-09
AT4G18820.1 | Symbols:  | AAA-type ATPase family protein | chr4:...    59   7e-09
AT1G04730.1 | Symbols: CTF18 | P-loop containing nucleoside trip...    52   5e-07
AT5G66130.1 | Symbols: ATRAD17, RAD17 | RADIATION SENSITIVE 17 |...    49   6e-06

>AT1G77470.1 | Symbols: RFC3, RFC5 | replication factor C subunit 3
           | chr1:29112194-29114323 REVERSE LENGTH=369
          Length = 369

 Score =  566 bits (1460), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 284/370 (76%), Positives = 316/370 (85%), Gaps = 13/370 (3%)

Query: 5   EAIHPMEIDGDDDLTYSARP-DKGKSVLVAGNPPGGQKAIPWVEKYRPQSLDDVAAHRDI 63
           E    M+ID D+      +P +KGK V+  G PP   KA PWVEKYRPQSLDDVAAHRDI
Sbjct: 3   ELTSAMDIDVDE--IQPRKPINKGKDVVGFGPPPQS-KATPWVEKYRPQSLDDVAAHRDI 59

Query: 64  VDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNMILELNASDDRGIGVV 123
           +DTIDRLT EN+LPHLLLYGPPGTGKTSTILAVARKLYG +YRNMILELNASDDRGI VV
Sbjct: 60  IDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVV 119

Query: 124 REQIQNFASTQSLSFGVKTSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 183
           R+QIQ+FASTQS S G K+SVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALI NHV
Sbjct: 120 RQQIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHV 178

Query: 184 NKIIPALQSRCTRFRFAPLDAAHVSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALN 243
           NKIIPALQSRCTRFRFAPLD  H+S+RLKHVI+AE L V D GL ALVRLSNGDMRKALN
Sbjct: 179 NKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKALN 238

Query: 244 ILQSTHMA--------SQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIYEIK 295
           ILQSTHMA        S+QITEE VYLCTGNPLPKDIEQIS+WLLN+ F + +K + EIK
Sbjct: 239 ILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQISHWLLNKPFDECYKDVSEIK 298

Query: 296 TRKGLAVIDIVREVTMFVFKIKMPPSVRVQLMTDLADIEYRLSFGCNDKLQLGSVISSFT 355
           TRKGLA++DIV+E+T+F+FKIKMP +VRVQL+ DLADIEYRLSFGCNDKLQLG++IS+FT
Sbjct: 299 TRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFT 358

Query: 356 RARFALVEAA 365
            AR  +V AA
Sbjct: 359 HARSIIVGAA 368


>AT1G63160.1 | Symbols: RFC2 | replication factor C 2 |
           chr1:23422068-23423771 REVERSE LENGTH=333
          Length = 333

 Score =  219 bits (558), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 183/319 (57%), Gaps = 11/319 (3%)

Query: 44  PWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGA 103
           PWVEKYRP  + D+  + D V  +  +  +  +P+L+L GPPGTGKT++ILA+A +L G 
Sbjct: 16  PWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGT 75

Query: 104 QYRNMILELNASDDRGIGVVREQIQNFASTQ-SLSFGVKTSVKLVLLDEADAMTKDAQFA 162
            Y+  +LELNASDDRGI VVR +I+ FA  + +L  G     K+V+LDEAD+MT  AQ A
Sbjct: 76  NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRH---KVVILDEADSMTSGAQQA 132

Query: 163 LRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSERLKHVIKAEGLDV 222
           LRR IE Y+ STRFAL CN   KII  +QSRC   RF+ L    +  RL  V+ AE +  
Sbjct: 133 LRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPY 192

Query: 223 QDSGLEALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNE 282
              GLEA++  ++GDMR+ALN LQ+T      + +E V+     P P  ++ I   +L  
Sbjct: 193 VPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLES 252

Query: 283 QF---ADSFKRIYEIKTRKGLAVIDIVREVTMFVFKIKMPPSVRVQLMTDLADIEYRLSF 339
           +F    D  K++Y++    G +  DI+  +   +    M   ++++ M +      R+  
Sbjct: 253 KFDIACDGLKQLYDL----GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD 308

Query: 340 GCNDKLQLGSVISSFTRAR 358
           G    LQL  +++  +  R
Sbjct: 309 GVGSYLQLCGLLAKLSIVR 327


>AT1G21690.3 | Symbols: EMB1968 | ATPase family associated with
           various cellular activities (AAA)  |
           chr1:7615675-7618421 FORWARD LENGTH=341
          Length = 341

 Score =  212 bits (540), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/227 (46%), Positives = 148/227 (65%), Gaps = 7/227 (3%)

Query: 37  PGGQKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAV 96
           P  Q + PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+
Sbjct: 3   PVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAI 62

Query: 97  ARKLYGAQ-YRNMILELNASDDRGIGVVREQIQNFASTQSLSFGVKT-----SVKLVLLD 150
           A +L+G + Y++ +LELNASDDRGI VVR +I++FA+    S   ++     S K+++LD
Sbjct: 63  AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILD 122

Query: 151 EADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSER 210
           EAD+MT+DAQ ALRR +E Y+K TRF  ICN++++II  L SRC +FRF PL    +S R
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNR 182

Query: 211 LKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQS-THMASQQIT 256
           + H+   EGL +    L  L  +S GD+R+A+  LQS T +    IT
Sbjct: 183 ILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTIT 229


>AT1G21690.1 | Symbols: EMB1968, RFC4 | ATPase family associated
           with various cellular activities (AAA)  |
           chr1:7615675-7618362 FORWARD LENGTH=339
          Length = 339

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/227 (46%), Positives = 148/227 (65%), Gaps = 7/227 (3%)

Query: 37  PGGQKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAV 96
           P  Q + PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+
Sbjct: 3   PVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAI 62

Query: 97  ARKLYGAQ-YRNMILELNASDDRGIGVVREQIQNFASTQSLSFGVKT-----SVKLVLLD 150
           A +L+G + Y++ +LELNASDDRGI VVR +I++FA+    S   ++     S K+++LD
Sbjct: 63  AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILD 122

Query: 151 EADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSER 210
           EAD+MT+DAQ ALRR +E Y+K TRF  ICN++++II  L SRC +FRF PL    +S R
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNR 182

Query: 211 LKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQS-THMASQQIT 256
           + H+   EGL +    L  L  +S GD+R+A+  LQS T +    IT
Sbjct: 183 ILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTIT 229


>AT1G21690.4 | Symbols: EMB1968 | ATPase family associated with
           various cellular activities (AAA)  |
           chr1:7615675-7618362 FORWARD LENGTH=332
          Length = 332

 Score =  207 bits (526), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 11/216 (5%)

Query: 37  PGGQKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAV 96
           P  Q + PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT+T LA+
Sbjct: 3   PVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAI 62

Query: 97  ARKLYGAQYRNMILELNASDDRGIGVVREQIQNFASTQSLSFGVKT-----SVKLVLLDE 151
           A +L+G      +LELNASDDRGI VVR +I++FA+    S   ++     S K+++LDE
Sbjct: 63  AHQLFG------VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDE 116

Query: 152 ADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSERL 211
           AD+MT+DAQ ALRR +E Y+K TRF  ICN++++II  L SRC +FRF PL    +S R+
Sbjct: 117 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRI 176

Query: 212 KHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQS 247
            H+   EGL +    L  L  +S GD+R+A+  LQS
Sbjct: 177 LHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQS 212


>AT1G21690.2 | Symbols: EMB1968, RFC4 | ATPase family associated
           with various cellular activities (AAA)  |
           chr1:7615675-7618362 FORWARD LENGTH=327
          Length = 327

 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/227 (46%), Positives = 146/227 (64%), Gaps = 19/227 (8%)

Query: 37  PGGQKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAV 96
           P  Q + PWVEKYRP+ + DVA   ++             PH+L YGPPGTGKT+T LA+
Sbjct: 3   PVLQSSQPWVEKYRPKQVKDVAHQEEVC------------PHMLFYGPPGTGKTTTALAI 50

Query: 97  ARKLYGAQ-YRNMILELNASDDRGIGVVREQIQNFASTQSLSFGVKT-----SVKLVLLD 150
           A +L+G + Y++ +LELNASDDRGI VVR +I++FA+    S   ++     S K+++LD
Sbjct: 51  AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILD 110

Query: 151 EADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSER 210
           EAD+MT+DAQ ALRR +E Y+K TRF  ICN++++II  L SRC +FRF PL    +S R
Sbjct: 111 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNR 170

Query: 211 LKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQS-THMASQQIT 256
           + H+   EGL +    L  L  +S GD+R+A+  LQS T +    IT
Sbjct: 171 ILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTIT 217


>AT5G27740.1 | Symbols: EMB161, EMB2775, EMB251, RFC3 | ATPase
           family associated with various cellular activities (AAA)
            | chr5:9823831-9826869 FORWARD LENGTH=354
          Length = 354

 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 170/351 (48%), Gaps = 53/351 (15%)

Query: 45  WVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQ 104
           WV+KYRP+SLD V  H DI   + +L +E   PHLL YGP G+GK + I+A+ +++YGA 
Sbjct: 3   WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62

Query: 105 ----------------YRNMILELNA----------SDDRGIG---VVREQIQNFASTQS 135
                            R + LEL              D G     +V+E I+  A  + 
Sbjct: 63  AEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRP 122

Query: 136 LSFGVKTSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCT 195
           +    K   K+++L+E D ++++AQ +LRR +EKY+ S R  L CN  +K+  A++SRC 
Sbjct: 123 IDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCL 182

Query: 196 RFRFAPLDAAHVSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQI 255
             R        + + L+ V K E L +       +   SN  +R+A+  L++  + +   
Sbjct: 183 NVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQN--- 239

Query: 256 TEEAVYLCTGNPL--PKDIE----QISYWLLNEQFADSFKRIYEIKTRKGLAVID----- 304
                Y  TGN +  P D E    +I+  ++ EQ   S K++++++ +    +++     
Sbjct: 240 -----YPFTGNQVISPMDWEEYVAEIATDMMKEQ---SPKKLFQVRGKVYELLVNCIPPE 291

Query: 305 -IVREVTMFVFKIKMPPSVRVQLMTDLADIEYRLSFGCNDKLQLGSVISSF 354
            I++ +   + K K+   +++++    A  E+R+  G      + + ++ F
Sbjct: 292 VILKRLLHELLK-KLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKF 341


>AT1G24290.1 | Symbols:  | AAA-type ATPase family protein |
           chr1:8612650-8614227 REVERSE LENGTH=525
          Length = 525

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 124/282 (43%), Gaps = 43/282 (15%)

Query: 7   IHPMEID---GDDDLTYSARPDKGKSVLVAGNPPGGQKAI---------PWVEKYRPQSL 54
           +HP  +    GDD    S RP+    + VA +    +  +         P  E+ RP++L
Sbjct: 56  LHPKALAPAMGDDS---SKRPNPKTQIHVAADDSNKRHKLSSSSHRQHQPLSERMRPRTL 112

Query: 55  DDVAA--HRDIVDTIDRLTTE-NRLPHLLLYGPPGTGKTSTILAVARKLYGAQ-----YR 106
           DDV    H     ++ R   E NRLP ++ +GPPGTGKTS    +A+ L  +      YR
Sbjct: 113 DDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTS----IAKSLINSSKDPSLYR 168

Query: 107 NMILELNASDDRGIGVVREQIQNFASTQSLSF-GVKTSVKLVLLDEADAMTKDAQFALRR 165
            + L    S   G+  VR+ ++   S + L+  G K +V  + +DE     K  Q     
Sbjct: 169 FVSLSAVTS---GVKDVRDAVE---SAKRLNLEGRKRTV--LFMDEVHRFNKSQQDTFLP 220

Query: 166 VIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSERLKHVIK------AEG 219
           VIE  +     A   N    +I  L SRC      PL   HV   L+  +          
Sbjct: 221 VIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSERGLPNS 280

Query: 220 LDVQDSGLEALVRLSNGDMRKALNILQ-STHMASQQITEEAV 260
           ++V DS +E L    +GD R ALN L+ S  MA+ +   +AV
Sbjct: 281 VEVDDSVIEFLANNCDGDARVALNALEISATMATTRAGTDAV 322


>AT5G22010.1 | Symbols: AtRFC1, RFC1 | replication factor C1 |
           chr5:7280632-7287037 REVERSE LENGTH=956
          Length = 956

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 61/265 (23%)

Query: 24  PDKGKSVLVAGNPPGGQKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPH----- 78
           P KGK+ ++       + ++PW EKYRP+  +++  ++ +V  +      N L H     
Sbjct: 328 PAKGKNKII-------ETSLPWTEKYRPKVPNEIVGNQSLVTQL-----HNWLSHWHDQF 375

Query: 79  --------------------LLLYGPPGTGKTSTILAVARKLYGAQYRNMILELNASDDR 118
                               +LL G PG GKT++   V++ + G Q     +E+NASD R
Sbjct: 376 GGTGSKGKGKKLNDAGSKKAVLLSGTPGIGKTTSAKLVSQ-MLGFQ----AVEVNASDSR 430

Query: 119 G---------IG-----VVREQIQNFASTQSLSFGVKTSVKLVL-LDEADAMTKDAQFAL 163
           G         IG      V+E + N A   + +F      K VL +DE D M+   +  +
Sbjct: 431 GKANSNIAKGIGGSNANSVKELVNNEA--MAANFDRSKHPKTVLIMDEVDGMSAGDRGGV 488

Query: 164 RRVI--EKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSERLKHVIKAEGLD 221
             +I   K +K     +  +  ++ + +L + C    +       +++RL H+ KAEGL+
Sbjct: 489 ADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLE 548

Query: 222 VQDSGLEALVRLSNGDMRKALNILQ 246
           + +  LE L    NGD+R A+N LQ
Sbjct: 549 INEIALEELAERVNGDIRLAVNQLQ 573


>AT1G14460.1 | Symbols:  | AAA-type ATPase family protein |
           chr1:4948962-4952750 REVERSE LENGTH=1116
          Length = 1116

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 28/237 (11%)

Query: 47  EKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLY-GPPGTGKTST--ILAVARKL--- 100
           +KY+P   D++     +V ++     + R+ H+ L+ GP GTGKTST  IL+ A      
Sbjct: 426 QKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILSAALNCDVV 485

Query: 101 ---------------YGAQYRNMILELNASDDRGIGVVREQIQNFASTQSLSFGVKTS-- 143
                          Y       +LEL+A    G   VR  ++       L+   ++S  
Sbjct: 486 TEEMKPCGYCKECSDYMLGKSRDLLELDAGKKNGAEKVRYLLKKL-----LTLAPQSSQR 540

Query: 144 VKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLD 203
            K+ ++DE   +      +L + +E   +   F  I   ++ +   +QSRC ++ F  + 
Sbjct: 541 YKVFVIDECHLLPSRTWLSLLKFLENPLQKFVFVCITTDLDNVPRTIQSRCQKYIFNKVR 600

Query: 204 AAHVSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQITEEAV 260
              +  RL+ +   E LDV+   L+ +   ++G +R A  +L+   +  ++IT + V
Sbjct: 601 DGDIVVRLRKIASDENLDVESQALDLIALNADGSLRDAETMLEQLSLMGKRITVDLV 657


>AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein |
           chr2:661093-665337 FORWARD LENGTH=1218
          Length = 1218

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 23/230 (10%)

Query: 47  EKYRPQSLDDVAAHRDIVDTIDRLTTENRL-PHLLLYGPPGTGKTSTILAVARKLYGAQY 105
           +KYRP   +++     +V ++      +R+ P  L  GP GTGKTST    +  L     
Sbjct: 453 QKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNCVAT 512

Query: 106 RNM-------------------ILELNASDDRGIGVVREQIQNFASTQSLSFGVKTSVKL 146
             M                     EL+ ++ +G   VR  ++N  +    +  +    K+
Sbjct: 513 EEMKPCGYCKECNDFMSGKSKDFWELDGANKKGADKVRYLLKNLPTILPRNSSM---YKV 569

Query: 147 VLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAH 206
            ++DE   +      +  + +E   +   F  I   +  +   +QSRC +F F  L  + 
Sbjct: 570 FVIDECHLLPSKTWLSFLKFLENPLQKVVFIFITTDLENVPRTIQSRCQKFLFDKLKDSD 629

Query: 207 VSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQIT 256
           +  RLK +   E LDV    L+ +   ++G +R A  +L+   +  ++IT
Sbjct: 630 IVVRLKKIASDENLDVDLHALDLIAMNADGSLRDAETMLEQLSLLGKRIT 679


>AT5G45720.2 | Symbols:  | AAA-type ATPase family protein |
           chr5:18543338-18546629 REVERSE LENGTH=956
          Length = 956

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 18/227 (7%)

Query: 45  WVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHL-LLYGPPGTGKTSTILAVARKLYGA 103
           + +KY P++  D+     +V  +     + R+  L + +GP GTGKTS     AR L   
Sbjct: 345 FTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKTSCARVFARALNCH 404

Query: 104 QYRNM----ILELNASDDRGIGVVREQIQNFASTQSLSFGV---KTSVK-------LVLL 149
                    +     S D G       I+     +S  F     KT+++       +++ 
Sbjct: 405 STEQSKPCGVCSSCVSYDDGKN---RYIREMGPVKSFDFENLLDKTNIRQQQKQQLVLIF 461

Query: 150 DEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSE 209
           D+ D M+ D    L +++++  +   F L+C+ ++ +   + SRC +F F  L    + +
Sbjct: 462 DDCDTMSTDCWNTLSKIVDRAPRRVVFVLVCSSLDVLPHIIVSRCQKFFFPKLKDVDIID 521

Query: 210 RLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQIT 256
            L+ +   E +D+    L+ +   S+G +R A   L+   +   +I+
Sbjct: 522 SLQLIASKEEIDIDKDALKLVASRSDGSLRDAEMTLEQLSLLGTRIS 568


>AT5G45720.1 | Symbols:  | AAA-type ATPase family protein |
           chr5:18543338-18546629 REVERSE LENGTH=966
          Length = 966

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 18/227 (7%)

Query: 45  WVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHL-LLYGPPGTGKTSTILAVARKLYGA 103
           + +KY P++  D+     +V  +     + R+  L + +GP GTGKTS     AR L   
Sbjct: 345 FTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKTSCARVFARALNCH 404

Query: 104 QYRNM----ILELNASDDRGIGVVREQIQNFASTQSLSFGV---KTSVK-------LVLL 149
                    +     S D G       I+     +S  F     KT+++       +++ 
Sbjct: 405 STEQSKPCGVCSSCVSYDDGKN---RYIREMGPVKSFDFENLLDKTNIRQQQKQQLVLIF 461

Query: 150 DEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVSE 209
           D+ D M+ D    L +++++  +   F L+C+ ++ +   + SRC +F F  L    + +
Sbjct: 462 DDCDTMSTDCWNTLSKIVDRAPRRVVFVLVCSSLDVLPHIIVSRCQKFFFPKLKDVDIID 521

Query: 210 RLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQIT 256
            L+ +   E +D+    L+ +   S+G +R A   L+   +   +I+
Sbjct: 522 SLQLIASKEEIDIDKDALKLVASRSDGSLRDAEMTLEQLSLLGTRIS 568


>AT4G24790.2 | Symbols:  | AAA-type ATPase family protein |
           chr4:12778222-12781345 FORWARD LENGTH=857
          Length = 857

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 32/239 (13%)

Query: 47  EKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHL-LLYGPPGTGKTSTILAVARKLYGAQY 105
           +K+RP+S D++     +V  +       R+  + L +GP GTGKTST      K++ A  
Sbjct: 243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTST-----SKIFAAAL 297

Query: 106 RNMILELNASDDRGIGVVREQIQNFAS-------TQSLSFG----------------VKT 142
             +     A+  R  G+  E    F+        T S                    V +
Sbjct: 298 NCLS---QAAHSRPCGLCSECKSYFSGRGRDVMETDSGKLNRPSYLRSLIKSASLPPVSS 354

Query: 143 SVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPL 202
             K+ ++DE   + ++    L   ++ +++ + F L+ + + K+   + SR  ++ F+ +
Sbjct: 355 RFKVFIIDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKV 414

Query: 203 DAAHVSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQITEEAVY 261
             A +S +L  +   EG+D     ++ +   S+G +R A  +L    +  ++IT    Y
Sbjct: 415 CDADISTKLAKICIEEGIDFDQGAVDFIASKSDGSLRDAEIMLDQLSLLGKRITTSLAY 473


>AT4G24790.1 | Symbols:  | AAA-type ATPase family protein |
           chr4:12778222-12781345 FORWARD LENGTH=857
          Length = 857

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 32/239 (13%)

Query: 47  EKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHL-LLYGPPGTGKTSTILAVARKLYGAQY 105
           +K+RP+S D++     +V  +       R+  + L +GP GTGKTST      K++ A  
Sbjct: 243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTST-----SKIFAAAL 297

Query: 106 RNMILELNASDDRGIGVVREQIQNFAS-------TQSLSFG----------------VKT 142
             +     A+  R  G+  E    F+        T S                    V +
Sbjct: 298 NCLS---QAAHSRPCGLCSECKSYFSGRGRDVMETDSGKLNRPSYLRSLIKSASLPPVSS 354

Query: 143 SVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPL 202
             K+ ++DE   + ++    L   ++ +++ + F L+ + + K+   + SR  ++ F+ +
Sbjct: 355 RFKVFIIDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKV 414

Query: 203 DAAHVSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQITEEAVY 261
             A +S +L  +   EG+D     ++ +   S+G +R A  +L    +  ++IT    Y
Sbjct: 415 CDADISTKLAKICIEEGIDFDQGAVDFIASKSDGSLRDAEIMLDQLSLLGKRITTSLAY 473


>AT4G18820.1 | Symbols:  | AAA-type ATPase family protein |
           chr4:10330371-10334090 FORWARD LENGTH=1097
          Length = 1097

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 19/228 (8%)

Query: 46  VEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHL-LLYGPPGTGKTSTILAVARKL---- 100
            EKY P++  D+     +V  +       +L  L + +GP GTGKTS     AR L    
Sbjct: 434 TEKYTPKTFRDLLGQNLVVQALSNAVARRKLGLLYVFHGPNGTGKTSCARIFARALNCHS 493

Query: 101 ------YGAQYRNMILELNASDD-RGIGVVREQIQNFASTQSLSFG----VKTSVKLVLL 149
                  G     +  ++  S + R +G V     +F     L  G       S ++ + 
Sbjct: 494 MEQPKPCGTCSSCVSHDMGKSWNIREVGPVGNY--DFEKIMDLLDGNVMVSSQSPRVFIF 551

Query: 150 DEADAMTKDAQFALRRVIEKYT-KSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHVS 208
           D+ D ++ D   AL +V+++   +   F L+C+ ++ +   + SRC +F F  L  A + 
Sbjct: 552 DDCDTLSSDCWNALSKVVDRAAPRHVVFILVCSSLDVLPHVIISRCQKFFFPKLKDADIV 611

Query: 209 ERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQIT 256
             L+ +   E +++    L+ +   S+G +R A   L+   +  Q+I+
Sbjct: 612 YSLQWIASKEEIEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRIS 659


>AT1G04730.1 | Symbols: CTF18 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr1:1325385-1331086 REVERSE LENGTH=943
          Length = 943

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 39/225 (17%)

Query: 62  DIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNMILELNASDDRGIG 121
           D+ +   +LT       LLL G PG GKT T+  +A K  G  YR  ++E+NASD+R   
Sbjct: 323 DLWNKKSKLTGPPEQKILLLCGAPGLGKT-TLAHIAAKHCG--YR--VVEINASDERSAS 377

Query: 122 VVREQIQNFASTQSLSFGVKTSVKLVLLDEADAMTKDAQFAL----------------RR 165
            +  +I +     S++    +  K +++DE D    D + A+                + 
Sbjct: 378 AIETRILDVVQMNSVT--ADSRPKCLVIDEIDGALGDGKGAVDVILKMVLAERKHATGKE 435

Query: 166 VIEKYTKSTR-----------FALICNHVNKIIPALQS--RCTRFR-FAPLDAAHVSERL 211
            +E    S++              ICN +    PAL+   +  +   F     + V  RL
Sbjct: 436 NVENVKTSSKKDRRTAPLSRPVICICNDL--YAPALRPLRQIAKVHIFVQPTVSRVVNRL 493

Query: 212 KHVIKAEGLDVQDSGLEALVRLSNGDMRKALNILQSTHMASQQIT 256
           K++   EG+  +   L AL   +  D+R  LN LQ  +   + I 
Sbjct: 494 KYICNMEGMKARSFALSALAEYTECDIRSCLNTLQFLYKKKETIN 538


>AT5G66130.1 | Symbols: ATRAD17, RAD17 | RADIATION SENSITIVE 17 |
           chr5:26434236-26437091 FORWARD LENGTH=599
          Length = 599

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 40/242 (16%)

Query: 45  WVEKYRPQSLDDVAAHRDIVD--------TIDRLTTENRLPHLLLYGPPGTGKTST---- 92
           WV+KYRP++L++++ H+  VD        ++D L    R   LL+ G  G GK++T    
Sbjct: 93  WVDKYRPRTLEELSVHKKKVDEVKLWFQESLDFLKNGLRNNVLLVTGQAGVGKSATIHLI 152

Query: 93  --ILAVARKLYGAQYRNMILELNASDDRGIGVVR--EQIQNFAST--------QSLSFGV 140
             IL V    + A    +  E   +   G+      ++ +NF  +         S + G+
Sbjct: 153 TSILGVTVHEWNAPIPTIWQEHVHNTSSGLKYTSKLDEFENFVESTRKYGVMASSSTDGI 212

Query: 141 KTSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFA---LICNHVN--------KIIPA 189
           K  V L++ D   A  + A   L+  +    KST+     LI +H N        + +  
Sbjct: 213 KAPVVLLIDDLPLANGRHAFERLQNCLLLLVKSTQIPTVILITDHNNADSSDQTARRMED 272

Query: 190 LQSRCTR-----FRFAPLDAAHVSERLKHVIKAEGLDVQDSGLEALVRLSNGDMRKALNI 244
            QS   R       F P+    + + L+ + + E   V    ++ +   S GD+R A+  
Sbjct: 273 TQSSLERAGALKVAFNPITKNSIKKVLQRICREEHCKVTTMEIDQMATASGGDIRHAITS 332

Query: 245 LQ 246
           LQ
Sbjct: 333 LQ 334