Miyakogusa Predicted Gene

Lj1g3v0812930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0812930.1 tr|D7FH97|D7FH97_ECTSI Similar to chromosome
fragility associated gene 1 OS=Ectocarpus siliculosus
G,34.62,2e-18,CHROMOSOME TRANSMISSION FIDELITY FACTOR 18,NULL;
AAA,ATPase, AAA-type, core; P-loop containing nucle,CUFF.26363.1
         (619 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77620.1 | Symbols:  | P-loop containing nucleoside triphosph...   273   3e-73

>AT1G77620.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:29167934-29172867
           REVERSE LENGTH=1151
          Length = 1151

 Score =  273 bits (697), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 197/577 (34%), Positives = 269/577 (46%), Gaps = 96/577 (16%)

Query: 71  RRSVRRRLVQTTLFPLNPPPEPRDKPIXXXXXXXXXXXXYCGDAENHRKKRKPKGKSTPR 130
           RR+VRR+LVQ++L P  P     +  I              GD  +  KK + + + TP+
Sbjct: 6   RRNVRRKLVQSSLLPHKP-----EDVIDSNGDPMCDEGGEVGDGRSQGKKTRKQKERTPK 60

Query: 131 KKGSKN---------STPKKNASANENKVSASQNVFAD---PVPDLRLEAKLSAEENSRM 178
              +K          +TPKK A+ N    +  Q + A+   PVP+LRLEAKL AEENSRM
Sbjct: 61  NGATKKVAKGKSPRKTTPKKCATKNGIVAAGDQMIAANVSPPVPNLRLEAKLRAEENSRM 120

Query: 179 FAGRQVHPFFSSCKAGKKIQEIPEPGSNLCKAKSEDERITCGPIHVFENIKDDT-SSLDW 237
            AG+Q+HPFFS+ K GK+ QE     +  C  +  D+ +T GPIHVF+  +DD  ++LDW
Sbjct: 121 SAGKQIHPFFSTWKGGKRNQEAVAAENGTCLGRGRDKIVTIGPIHVFDKFQDDYPTTLDW 180

Query: 238 RNWTFLGNTTSENCGPESSNSSVLEGSAESLNFKMLLSTLDPSGASVFQN---ALSSTDL 294
           +NWTF   T+                + ES + ++  ++L+P       N   +LS  D+
Sbjct: 181 KNWTFYEQTS----------------TTESPDQQIKFNSLEPRPKEFDLNELPSLSHPDV 224

Query: 295 LSVHQENLQE-TSPSNASPLA----------EKTKCPQMPKDDKVDLEVDECVNFVQAGI 343
             +  E  ++ TS S     A          EK  C       + D EV E +N      
Sbjct: 225 CVIDDEEPEQCTSQSEGIAEASSVVLIEDQEEKRGCLGFLDGAESDCEVHEAINL----- 279

Query: 344 FRKSDSEPLSRFLQESMRSYYRTYENKAEGS----LWTYKYRPTKAVEVCGNDESVNFLR 399
              SD       +   M+       N + G     LW  KY+P  A EVCGN ESV  + 
Sbjct: 280 ---SDDAGGEANISHEMQHLSCRESNDSSGQPCNRLWVDKYQPRSASEVCGNTESVKVMN 336

Query: 400 DWLHLWRERRYAGRKATXXXXXXXXXXXXXXXXXXXXXXXXXXXMNEEDSLQNVLLITGP 459
           +WL  W ER   G +                                EDS +NVLLI GP
Sbjct: 337 EWLRQWYER---GFQPNKDFLSSDEDKSQDADYNCSESDSDSEKSGAEDSQKNVLLIVGP 393

Query: 460 VGSGKSAAVYACAQEQGFDILELNASDCRNGAVVKQYFGDTLSSHGFKRLSEHTASSQKK 519
            GSGKSAA++ACA+EQGF ILE N S+CR+G VV+Q FG+ L S+   R           
Sbjct: 394 AGSGKSAAIHACAKEQGFKILESNTSECRSGTVVRQKFGEALKSYSLSR----------- 442

Query: 520 AMKLPPAAPLLNVQATDEVNEGVVELIAISDDEAQSSGGTSRKLLDKNNVVASDKFQTLI 579
                   PL N        E VVE++ +     Q+ G                  + LI
Sbjct: 443 -----SLDPLFNSCTDGNGVEDVVEVMPVL--HIQNDGAN---------------LKPLI 480

Query: 580 LVEDVDILFPEDRGCIAAIQQIAESARGPIILTSNSK 616
           L EDVDI F EDRG ++AIQQIA  A+GP++LT+N K
Sbjct: 481 LFEDVDICFAEDRGLVSAIQQIAVKAKGPVVLTANDK 517