Miyakogusa Predicted Gene

Lj1g3v0809690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0809690.1 tr|A9V3A3|A9V3A3_MONBE Predicted protein
OS=Monosiga brevicollis GN=33060 PE=4
SV=1,35.5,4e-18,Rhomboid-like,NULL; RHOMBOID-RELATED,Peptidase S54,
rhomboid; no description,NULL;
Rhomboid,Peptidas,NODE_57099_length_1056_cov_47.316288.path1.1
         (197 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18600.1 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12...   260   4e-70
AT1G74130.1 | Symbols:  | Rhomboid-related intramembrane serine ...   173   6e-44
AT1G74130.2 | Symbols:  | Rhomboid-related intramembrane serine ...   151   3e-37
AT1G74140.5 | Symbols:  | Rhomboid-related intramembrane serine ...   148   2e-36
AT1G74140.1 | Symbols:  | Rhomboid-related intramembrane serine ...   147   6e-36
AT1G74140.4 | Symbols:  | Rhomboid-related intramembrane serine ...   138   2e-33
AT1G74140.3 | Symbols:  | Rhomboid-related intramembrane serine ...   119   9e-28
AT1G74140.2 | Symbols:  | Rhomboid-related intramembrane serine ...   118   2e-27

>AT1G18600.1 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12 |
           chr1:6400647-6402587 FORWARD LENGTH=336
          Length = 336

 Score =  260 bits (665), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 167/200 (83%), Gaps = 3/200 (1%)

Query: 1   MVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIISNM 60
           +V GL+IAN  +F++WR+ +++FM+NNF ISLDN KSGRLHTLIT+AFSH+D  HI+SNM
Sbjct: 135 VVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRLHTLITSAFSHIDIGHIVSNM 194

Query: 61  LGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSS---KGWRFSNHSKEL 117
           +GLYFFGT++  NFGP FLLKLYLAGA+GGSVFYL+H AY A +S   +G    + S+  
Sbjct: 195 IGLYFFGTSIARNFGPQFLLKLYLAGALGGSVFYLIHHAYMAATSPKGQGAFVRDPSRTP 254

Query: 118 ALGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTSISGSA 177
            LGASGAVNA+MLL IFL P+AT+Y + FIPVPA+LLG+F+IGKD+LRI EG+++ISGSA
Sbjct: 255 GLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLIGKDILRITEGNSNISGSA 314

Query: 178 HLGGATVGAIAWALVRKGRF 197
           HLGGA V AIAWA +RKGRF
Sbjct: 315 HLGGAAVAAIAWARIRKGRF 334


>AT1G74130.1 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27873687-27875897 FORWARD
           LENGTH=322
          Length = 322

 Score =  173 bits (439), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 133/205 (64%), Gaps = 9/205 (4%)

Query: 1   MVFGLIIANTAIFLLWRI--ADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIIS 58
           +VFGL+IAN A+F +WR+   D  +M+ NF +S  +  +GR+HTLIT+ FSHV A HII 
Sbjct: 117 VVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIHTLITSGFSHVGATHIIL 176

Query: 59  NMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSSKGWRFSNHSKEL- 117
           NM+GL +FG  +  +FGP +LLKLY AGA+GGSVF+L   A    S KG R     +   
Sbjct: 177 NMMGLCYFGARIARSFGPRYLLKLYFAGALGGSVFFLSSHALSVISLKGQRVVPKDQLKV 236

Query: 118 ---ALGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEG--DTS 172
               LGA+G V A+ LL + L+PK T YF L + VP +  G++ +G ++++++EG  + +
Sbjct: 237 PIGKLGANGPVYAITLLDMLLYPKVTTYFGLMLRVP-VFAGIYSLGLNIIKMLEGKNNNT 295

Query: 173 ISGSAHLGGATVGAIAWALVRKGRF 197
           ++    LGG  V  IAWA +RKGRF
Sbjct: 296 LTSLDQLGGVVVAVIAWARIRKGRF 320


>AT1G74130.2 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27873687-27875817 FORWARD
           LENGTH=296
          Length = 296

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 118/180 (65%), Gaps = 8/180 (4%)

Query: 1   MVFGLIIANTAIFLLWRI--ADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIIS 58
           +VFGL+IAN A+F +WR+   D  +M+ NF +S  +  +GR+HTLIT+ FSHV A HII 
Sbjct: 117 VVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIHTLITSGFSHVGATHIIL 176

Query: 59  NMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSSKGWRFSNHSKEL- 117
           NM+GL +FG  +  +FGP +LLKLY AGA+GGSVF+L   A    S KG R     +   
Sbjct: 177 NMMGLCYFGARIARSFGPRYLLKLYFAGALGGSVFFLSSHALSVISLKGQRVVPKDQLKV 236

Query: 118 ---ALGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIME-GDTSI 173
               LGA+G V A+ LL + L+PK T YF L + VP +  G++ +G ++++++E G T+I
Sbjct: 237 PIGKLGANGPVYAITLLDMLLYPKVTTYFGLMLRVP-VFAGIYSLGLNIIKMLEVGKTTI 295


>AT1G74140.5 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=320
          Length = 320

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 126/204 (61%), Gaps = 13/204 (6%)

Query: 1   MVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIISNM 60
           +VFGL+IAN A+F +WR++D  +M++ ++ +     SG +HTLIT+ FSH+    II NM
Sbjct: 123 VVFGLVIANAAVFTMWRVSDRSWMLSTYSFT-----SGYIHTLITSGFSHIGTSQIILNM 177

Query: 61  LGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQ-SSKGWRFSNHSKELA- 118
           +G+ +FG+ +    GP +LLKLY AGA+GGSV +L + A  A    +G    +H      
Sbjct: 178 IGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLATLKGEGVVIKDHQSTAPI 237

Query: 119 ---LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTS--I 173
              LGA G++ A+ LL +F++PK T YF L + V  ++  +  +G ++L I EG  +   
Sbjct: 238 SQLLGADGSMFAIALLDMFIYPKVTTYFALMLRV-HVMFRIINLGVEILNIPEGGPNHIA 296

Query: 174 SGSAHLGGATVGAIAWALVRKGRF 197
           S S  LGG  V A+AWA ++KGRF
Sbjct: 297 SSSGQLGGVVVAAMAWARIKKGRF 320


>AT1G74140.1 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=317
          Length = 317

 Score =  147 bits (370), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 16/204 (7%)

Query: 1   MVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIISNM 60
           +VFGL+IAN A+F +WR++D  +M++ ++ +     SG +HTLIT+ FSH+    II NM
Sbjct: 123 VVFGLVIANAAVFTMWRVSDRSWMLSTYSFT-----SGYIHTLITSGFSHIGTSQIILNM 177

Query: 61  LGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQ-SSKGWRFSNHSKELA- 118
           +G+ +FG+ +    GP +LLKLY AGA+GGSV +L + A  A    +G    +H      
Sbjct: 178 IGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLATLKGEGVVIKDHQSTAPI 237

Query: 119 ---LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTS--I 173
              LGA G++ A+ LL +F++PK T YF L + V  I+     +G ++L I EG  +   
Sbjct: 238 SQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVHRII----NLGVEILNIPEGGPNHIA 293

Query: 174 SGSAHLGGATVGAIAWALVRKGRF 197
           S S  LGG  V A+AWA ++KGRF
Sbjct: 294 SSSGQLGGVVVAAMAWARIKKGRF 317


>AT1G74140.4 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=306
          Length = 306

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 23/202 (11%)

Query: 1   MVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIISNM 60
           +VFGL+IAN A+F +WR++D  +M++ ++ +     SG +HTLIT+ FSH+    II NM
Sbjct: 123 VVFGLVIANAAVFTMWRVSDRSWMLSTYSFT-----SGYIHTLITSGFSHIGTSQIILNM 177

Query: 61  LGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQ-SSKGWRFSNHSKELA- 118
           +G+ +FG+ +    GP +LLKLY AGA+GGSV +L + A  A    +G    +H      
Sbjct: 178 IGISYFGSRIARTLGPLYLLKLYFAGALGGSVCFLSYHALLATLKGEGVVIKDHQSTAPI 237

Query: 119 ---LGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTSISG 175
              LGA G++ A+ LL +F++PK T YF L + V  +  G   I              S 
Sbjct: 238 SQLLGADGSMFAIALLDMFIYPKVTTYFALMLRVHVMFGGPNHIA-------------SS 284

Query: 176 SAHLGGATVGAIAWALVRKGRF 197
           S  LGG  V A+AWA ++KGRF
Sbjct: 285 SGQLGGVVVAAMAWARIKKGRF 306


>AT1G74140.3 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=301
          Length = 301

 Score =  119 bits (299), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 8/175 (4%)

Query: 30  ISLDNIKSGRLHTLITNAFSHVDAWHIISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVG 89
           +S  +  SG +HTLIT+ FSH+    II NM+G+ +FG+ +    GP +LLKLY AGA+G
Sbjct: 128 LSTYSFTSGYIHTLITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGALG 187

Query: 90  GSVFYLVHQAYKAQ-SSKGWRFSNHSKELA----LGASGAVNAVMLLQIFLFPKATIYFD 144
           GSV +L + A  A    +G    +H         LGA G++ A+ LL +F++PK T YF 
Sbjct: 188 GSVCFLSYHALLATLKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFA 247

Query: 145 LFIPVPAILLGVFMIGKDMLRIMEGDTS--ISGSAHLGGATVGAIAWALVRKGRF 197
           L + V  ++  +  +G ++L I EG  +   S S  LGG  V A+AWA ++KGRF
Sbjct: 248 LMLRV-HVMFRIINLGVEILNIPEGGPNHIASSSGQLGGVVVAAMAWARIKKGRF 301


>AT1G74140.2 | Symbols:  | Rhomboid-related intramembrane serine
           protease family protein | chr1:27876928-27879584 FORWARD
           LENGTH=298
          Length = 298

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 103/175 (58%), Gaps = 11/175 (6%)

Query: 30  ISLDNIKSGRLHTLITNAFSHVDAWHIISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVG 89
           +S  +  SG +HTLIT+ FSH+    II NM+G+ +FG+ +    GP +LLKLY AGA+G
Sbjct: 128 LSTYSFTSGYIHTLITSGFSHIGTSQIILNMIGISYFGSRIARTLGPLYLLKLYFAGALG 187

Query: 90  GSVFYLVHQAYKAQ-SSKGWRFSNHSKELA----LGASGAVNAVMLLQIFLFPKATIYFD 144
           GSV +L + A  A    +G    +H         LGA G++ A+ LL +F++PK T YF 
Sbjct: 188 GSVCFLSYHALLATLKGEGVVIKDHQSTAPISQLLGADGSMFAIALLDMFIYPKVTTYFA 247

Query: 145 LFIPVPAILLGVFMIGKDMLRIMEGDTS--ISGSAHLGGATVGAIAWALVRKGRF 197
           L + V  I+     +G ++L I EG  +   S S  LGG  V A+AWA ++KGRF
Sbjct: 248 LMLRVHRII----NLGVEILNIPEGGPNHIASSSGQLGGVVVAAMAWARIKKGRF 298