Miyakogusa Predicted Gene

Lj1g3v0786310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0786310.1 Non Chatacterized Hit- tr|I3S6J5|I3S6J5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,95.12,0.00000000000006,no description,YbaK/aminoacyl-tRNA
synthetase-associated domain; YbaK/ProRS associated
domain,YbaK/a,NODE_92560_length_75_cov_124.626663.path2.1
         (41 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...    75   1e-14
AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...    74   1e-14

>AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=307
          Length = 307

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/41 (87%), Positives = 37/41 (90%)

Query: 1   MAPEEALGEILQVPLGSVTPFAVVNESARDVSLLLDQGFKT 41
           MAPEEALGE+LQV LG VTPFAVVNESARDVSLLLDQ FK 
Sbjct: 86  MAPEEALGELLQVSLGCVTPFAVVNESARDVSLLLDQKFKN 126


>AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=308
          Length = 308

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/41 (87%), Positives = 37/41 (90%)

Query: 1   MAPEEALGEILQVPLGSVTPFAVVNESARDVSLLLDQGFKT 41
           MAPEEALGE+LQV LG VTPFAVVNESARDVSLLLDQ FK 
Sbjct: 86  MAPEEALGELLQVSLGCVTPFAVVNESARDVSLLLDQKFKN 126