Miyakogusa Predicted Gene

Lj1g3v0786290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0786290.1 Non Chatacterized Hit- tr|I1KA80|I1KA80_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30198 PE,87.04,1e-18,
,NODE_54983_length_202_cov_62.004951.path3.1
         (56 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...    78   1e-15
AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...    78   1e-15

>AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=308
          Length = 308

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 42/53 (79%)

Query: 1   MSISLNARDLDIFIKSIGRDPSYVDLEANPTVGKDQPPDLAALVPSGSIALPD 53
           +S+SLN   LD F+KSIGRDP YVDLEANP VGKDQ PDLA  VPS S+ +P+
Sbjct: 139 VSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAVCVPSNSVIVPE 191


>AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=307
          Length = 307

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 42/53 (79%)

Query: 1   MSISLNARDLDIFIKSIGRDPSYVDLEANPTVGKDQPPDLAALVPSGSIALPD 53
           +S+SLN   LD F+KSIGRDP YVDLEANP VGKDQ PDLA  VPS S+ +P+
Sbjct: 139 VSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAVCVPSNSVIVPE 191