Miyakogusa Predicted Gene

Lj1g3v0751200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0751200.1 Non Chatacterized Hit- tr|I1KA37|I1KA37_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19258 PE,81.01,0,Domain
present in VPS9,Vacuolar sorting protein 9, subgroup; VPS9,Vacuolar
sorting protein 9; SUBFAM,CUFF.26262.1
         (412 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19770.1 | Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting p...   425   e-119
AT5G09320.1 | Symbols: VPS9B | Vacuolar sorting protein 9 (VPS9)...   397   e-111
AT3G19770.2 | Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting p...   321   5e-88

>AT3G19770.1 | Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting
           protein 9 (VPS9) domain | chr3:6866916-6869114 FORWARD
           LENGTH=520
          Length = 520

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/347 (62%), Positives = 262/347 (75%), Gaps = 22/347 (6%)

Query: 1   MEAAFKAHPLWAGCXXXXXXXXXXXXXKYVMTKLFSRVFASLPNDVKFDDQISEKMGLIQ 60
           MEAAF+AHPLW+GC             KYVMTKLF+RVFAS   +V  D+++ +KM L+Q
Sbjct: 57  MEAAFRAHPLWSGCSEEELDSAGDGLEKYVMTKLFTRVFASNTEEVIADEKLFQKMSLVQ 116

Query: 61  QFIRPENLDIMPAFQNETSWLLAQKELQKINMYKAPRDKLICILNCCKVIGNLLLNASLA 120
           QFI PENLDI P FQNE+SWLLAQKELQKINMYKAPRDKL+CILNCCKVI NLLLNAS+A
Sbjct: 117 QFISPENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIA 176

Query: 121 SKENPPGADEFLPVLIYVTIKANPPQLHSNLQYIQRFRRQTRLAGEAAYYFTNMLSAESF 180
           S EN PGADEFLPVLIYVTIKANPPQLHSNL YIQR+RR+++L GEAAY+FTN+LSAESF
Sbjct: 177 SNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESF 236

Query: 181 ISNIDAKAISMDETEFERNMEFSRALLSGLSVDTQDPNSPYQ-NYGQH--PRAEPAKHRN 237
           ISNIDAK+IS+DE EFE+NME +RA +SGL   T      YQ  +G    PR E    + 
Sbjct: 237 ISNIDAKSISLDEAEFEKNMESARARISGLDSQT------YQTGHGSAPPPRDESTLQKT 290

Query: 238 KALNDNKDPTLRTPSSVAKSESKRVSFSDELL-------ITKVPSLSDLENKGASMILKE 290
           ++LN  ++ TL    S     S  +S ++ELL       + K  S+SDLENKGA++ LK+
Sbjct: 291 QSLNPKRENTLFQSKS-----SDSLSGTNELLNINSETPMKKAESISDLENKGATL-LKD 344

Query: 291 DKLNEIFGEFPYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLG 337
            + +++F E+PY+FAS GDL +GDVE LLN+YKQLVFKYV L+KGLG
Sbjct: 345 TEPSKVFQEYPYIFASAGDLRIGDVEGLLNSYKQLVFKYVCLTKGLG 391


>AT5G09320.1 | Symbols: VPS9B | Vacuolar sorting protein 9 (VPS9)
           domain | chr5:2889007-2892016 REVERSE LENGTH=712
          Length = 712

 Score =  397 bits (1020), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 244/339 (71%), Gaps = 17/339 (5%)

Query: 1   MEAAFKAHPLWAGCXXXXXXXXXXXXXKYVMTKLFSRVFASLPNDVKFDDQISEKMGLIQ 60
           ME+AF+AHPLW+GC             KYVMTKLF RVFAS   DV  D+++ +K+ L+Q
Sbjct: 54  MESAFRAHPLWSGCSDDELDNAGDGLEKYVMTKLFPRVFASNTEDVISDEKLFQKISLVQ 113

Query: 61  QFIRPENLDIMPAFQNETSWLLAQKELQKINMYKAPRDKLICILNCCKVIGNLLLNASLA 120
           QFI PENLDI P FQN+TSWLLAQKELQKINMY APRDKL+CIL CCKVI NLLLNAS+A
Sbjct: 114 QFISPENLDIQPTFQNQTSWLLAQKELQKINMYNAPRDKLMCILRCCKVINNLLLNASIA 173

Query: 121 SKENPPGADEFLPVLIYVTIKANPPQLHSNLQYIQRFRRQTRLAGEAAYYFTNMLSAESF 180
           S +N PGAD+FLPVLIYVTIKANPPQ HSNL YIQR+RRQ++L GEA Y FTN+LSAESF
Sbjct: 174 SNQNEPGADQFLPVLIYVTIKANPPQFHSNLLYIQRYRRQSKLVGEAGYLFTNILSAESF 233

Query: 181 ISNIDAKAISMDETEFERNMEFSRALLSGLSVDTQDPNS-PYQNYGQHPRAEPAKHRNKA 239
           ISNIDAK++SMDE +FE  M+ + A LSG       P S  YQ    H  A P  H  K 
Sbjct: 234 ISNIDAKSLSMDEADFETKMKSAHARLSG-------PGSQSYQT--DHGAALPTAHNTK- 283

Query: 240 LNDNKDPTLRTPSSVAKSESKRVSFSDELLITKVPSLSDLENKGASMILKE-DKLNEIFG 298
               ++  L T S+ + S +       E  I K   ++DLENKGA+ +L +  +  +IF 
Sbjct: 284 ---RENMLLHTKSTDSFSGTNET--LSETPIKKADPITDLENKGAATLLNDRSEATKIFQ 338

Query: 299 EFPYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLG 337
           E+PY+FASVGDL +GDVEDLLNNYKQLVFKYV LSKGLG
Sbjct: 339 EYPYMFASVGDLKIGDVEDLLNNYKQLVFKYVCLSKGLG 377


>AT3G19770.2 | Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting
           protein 9 (VPS9) domain | chr3:6867742-6869114 FORWARD
           LENGTH=384
          Length = 384

 Score =  321 bits (823), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 167/267 (62%), Positives = 204/267 (76%), Gaps = 22/267 (8%)

Query: 81  LLAQKELQKINMYKAPRDKLICILNCCKVIGNLLLNASLASKENPPGADEFLPVLIYVTI 140
           + AQKELQKINMYKAPRDKL+CILNCCKVI NLLLNAS+AS EN PGADEFLPVLIYVTI
Sbjct: 1   MAAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIASNENAPGADEFLPVLIYVTI 60

Query: 141 KANPPQLHSNLQYIQRFRRQTRLAGEAAYYFTNMLSAESFISNIDAKAISMDETEFERNM 200
           KANPPQLHSNL YIQR+RR+++L GEAAY+FTN+LSAESFISNIDAK+IS+DE EFE+NM
Sbjct: 61  KANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNIDAKSISLDEAEFEKNM 120

Query: 201 EFSRALLSGLSVDTQDPNSPYQ-NYGQH--PRAEPAKHRNKALNDNKDPTLRTPSSVAKS 257
           E +RA +SGL   T      YQ  +G    PR E    + ++LN  ++ TL    S    
Sbjct: 121 ESARARISGLDSQT------YQTGHGSAPPPRDESTLQKTQSLNPKRENTLFQSKS---- 170

Query: 258 ESKRVSFSDELL-------ITKVPSLSDLENKGASMILKEDKLNEIFGEFPYLFASVGDL 310
            S  +S ++ELL       + K  S+SDLENKGA++ LK+ + +++F E+PY+FAS GDL
Sbjct: 171 -SDSLSGTNELLNINSETPMKKAESISDLENKGATL-LKDTEPSKVFQEYPYIFASAGDL 228

Query: 311 TVGDVEDLLNNYKQLVFKYVSLSKGLG 337
            +GDVE LLN+YKQLVFKYV L+KGLG
Sbjct: 229 RIGDVEGLLNSYKQLVFKYVCLTKGLG 255