Miyakogusa Predicted Gene
- Lj1g3v0748030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0748030.1 tr|G7J463|G7J463_MEDTR Auxin response factor
OS=Medicago truncatula GN=MTR_3g073420 PE=4 SV=1,71.27,0,seg,NULL;
B3,B3 DNA binding domain; no description,DNA-binding pseudobarrel
domain; Auxin_resp,Auxin,CUFF.26271.1
(486 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 311 8e-85
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 244 7e-65
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 236 3e-62
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 147 2e-35
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 145 8e-35
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 145 9e-35
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 140 3e-33
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 138 1e-32
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 138 1e-32
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 138 1e-32
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 137 1e-32
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 135 8e-32
ATMG00940.1 | Symbols: ORF164 | DNA binding | chrM:251403-251897... 132 7e-31
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 129 3e-30
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 128 8e-30
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 128 1e-29
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 128 1e-29
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 127 1e-29
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 127 1e-29
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 127 2e-29
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 127 2e-29
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 127 2e-29
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 127 2e-29
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 127 2e-29
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 126 3e-29
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 126 3e-29
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 124 1e-28
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 124 2e-28
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 124 2e-28
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 122 6e-28
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 122 7e-28
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 121 1e-27
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 119 4e-27
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 115 9e-26
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 104 1e-22
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 99 5e-21
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 80 4e-15
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 79 5e-15
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 64 2e-10
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 52 7e-07
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 51 2e-06
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 50 3e-06
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 50 4e-06
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 50 4e-06
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 49 6e-06
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 49 9e-06
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 49 9e-06
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 49 9e-06
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 311 bits (796), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/421 (42%), Positives = 238/421 (56%), Gaps = 13/421 (3%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
VQ L +TD+HG W+FRHIYRGTPRRHLLTTGWSKFVNSKKL+AGDSVVFM+ EMF+
Sbjct: 156 VQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFI 215
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAM 168
G+RR + G + F R+G GKL+ ++V +A+
Sbjct: 216 GVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAI 275
Query: 169 ELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQG 228
A+Q +PFEVV+YP AGWS+FVV+AE VE ++ + W+PG RVKMA+ET+DSSR+TWFQG
Sbjct: 276 NRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQG 335
Query: 229 MVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTKR 288
+VSS ++ + PW SPW+ LQITWDEPE+LQ K V+PWQVE + LHT FPP KR
Sbjct: 336 IVSS-TYQETGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKR 394
Query: 289 FKAAQGSGMFADGEGDP--FSMTRFTNSTMGHLNQTLLNYGIFPAGMQGAR-HDLXXXXX 345
K Q G F G+ + + +++ + ++ +Y FPAGMQGAR +D
Sbjct: 395 LKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDPSPSMFSYSTFPAGMQGARQYDFGSFNP 454
Query: 346 XXXXXXXXXHLYMGNSFGSNTVPRLHALSTE-LNVXXXXXXXXXXXXXXXXXXXXTDSVR 404
L+ N + +P L +STE +N D V
Sbjct: 455 TGFIGGNPPQLFTNNFL--SPLPDLGKVSTEMMNFGSPPSDNLSPNSNTTNLSSGNDLVG 512
Query: 405 NQNSNSAKPGSFSFQLFGAIIHTKQPDESGSQGTGCTGDDSSKGNETEGIDNPLDDSLTY 464
N+ S K S QLFG II ++ ESG +G +D SK E DN SL++
Sbjct: 513 NRGPLSKKVN--SIQLFGKIITVEEHSESGPAESGLCEEDGSK----ESSDNETQLSLSH 566
Query: 465 S 465
+
Sbjct: 567 A 567
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 178/301 (59%), Gaps = 16/301 (5%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
VQ ++ DVHG W+FRHIYRGTPRRHLLTTGWS FVN KKLVAGDS+VFM+ G++ V
Sbjct: 157 VQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCV 216
Query: 109 GLRRASRFAGGGDGARRSF---PIGXXXXXXXXXXXXXXXXXXXGFSR--NGKGKLSPKS 163
G+RRA R G G+G S PIG + KGK++ +S
Sbjct: 217 GIRRAKR-GGIGNGPEYSAGWNPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAES 275
Query: 164 VAEAMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRL 223
V EA LA PFEVVYYP+A S+F VKA A+R+ W GMR KMA ET+DSSR+
Sbjct: 276 VIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRI 335
Query: 224 TWFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTT-PGLHTV 282
+WF G VS+V+ SD WP SPWR+LQ+ WDEP++LQ K V+PW VE VS P T
Sbjct: 336 SWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTS 395
Query: 283 F-PPTKRFKAAQGSGMFADGEGDPFSMTRFTNSTM---GHLNQTLLNYGIFPAGMQGARH 338
F PP K+ + Q + + + F ++ + L+ L N P G+QGARH
Sbjct: 396 FSPPRKKMRLPQHPDY--NNLINSIPVPSFPSNPLIRSSPLSSVLDN---VPVGLQGARH 450
Query: 339 D 339
+
Sbjct: 451 N 451
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/300 (46%), Positives = 173/300 (57%), Gaps = 11/300 (3%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
VQ +I D+HG W+FRHIYRGTPRRHLLTTGWS FVN KKL+AGDS+VF+++ G++ V
Sbjct: 152 VQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCV 211
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGK--------GKLS 160
G+RRA R G G A P RNG G++
Sbjct: 212 GIRRAKR-GGLGSNAGSDNPYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVR 270
Query: 161 PKSVAEAMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDS 220
++VAEA+ AA FEVVYYP+A +F VKA V A+R+RW GMR KMA ET+DS
Sbjct: 271 VEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDS 330
Query: 221 SRLTWFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLH 280
SR++WF G VS+V +D WP SPWR+LQ+ WDEP++LQ K VSPW VE VS P +H
Sbjct: 331 SRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIH 390
Query: 281 -TVFPPTKRFKAAQGSGMFADGEGDPFSMTRFTNSTMGHLNQTLLN-YGIFPAGMQGARH 338
+ F P K+ + Q G P F N+ G L N PAG+QGAR
Sbjct: 391 LSPFSPRKKIRIPQPFEFPFHGTKFPIFSPGFANNGGGESMCYLSNDNNNAPAGIQGARQ 450
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG+ W FRHIYRG PRRHLLTTGWS FVN KKLV+GD+V+F++ G++ +G
Sbjct: 197 QELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLG 256
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RRAS+ G S ++ + +E
Sbjct: 257 VRRASQIEG-----------------------------TAALSAQYNQNMNHNNFSEVAH 287
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
+ F + Y PKA WS+F++ A + + + GMR K VE++D+S G+
Sbjct: 288 AISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERR-SPGI 346
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVE---QVSTTPGLHTVFPPT 286
+S +S D WP S WR L + WD+ + VSPW++E +S + T P
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKR 406
Query: 287 KRFKAAQGSGMFADGEGDPFSMTRFTNSTMGHLNQTLLNYGIFP 330
R + G EG T F S + L IFP
Sbjct: 407 SRIGFSSGKPDIPVSEG--IRATDFEESL--RFQRVLQGQEIFP 446
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 146/290 (50%), Gaps = 41/290 (14%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q LI D+H V W+FRHI+RG P+RHLLTTGWS FV++K+LVAGDSV+F++N + ++F+
Sbjct: 163 AQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFL 222
Query: 109 GLR---RASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVA 165
G+R R + S IG +A
Sbjct: 223 GIRHATRPQTIVPSSVLSSDSMHIGL--------------------------------LA 250
Query: 166 EAMELAAQDMPFEVVYYPKAGWSDFVVK-AEAVEEAIRVRWSPGMRVKMAVETDDSSRLT 224
A +A + F V ++P+A S+FV++ ++ ++ R S GMR +M ET++SS +
Sbjct: 251 AAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VR 309
Query: 225 WFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFP 284
+ G ++ +S D+ WP S WR +++ WDE + VS W++E ++T P ++FP
Sbjct: 310 RYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 369
Query: 285 PTKRFKAAQGSGMFADGEGDPFS-MTRFTNSTMGHLNQTLLNY---GIFP 330
+ G+ DG GD S +T LNY G+FP
Sbjct: 370 LRLKRPWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFP 419
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 146/290 (50%), Gaps = 41/290 (14%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q LI D+H V W+FRHI+RG P+RHLLTTGWS FV++K+LVAGDSV+F++N + ++F+
Sbjct: 163 AQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFL 222
Query: 109 GLR---RASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVA 165
G+R R + S IG +A
Sbjct: 223 GIRHATRPQTIVPSSVLSSDSMHIGL--------------------------------LA 250
Query: 166 EAMELAAQDMPFEVVYYPKAGWSDFVVK-AEAVEEAIRVRWSPGMRVKMAVETDDSSRLT 224
A +A + F V ++P+A S+FV++ ++ ++ R S GMR +M ET++SS +
Sbjct: 251 AAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VR 309
Query: 225 WFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFP 284
+ G ++ +S D+ WP S WR +++ WDE + VS W++E ++T P ++FP
Sbjct: 310 RYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 369
Query: 285 PTKRFKAAQGSGMFADGEGDPFS-MTRFTNSTMGHLNQTLLNY---GIFP 330
+ G+ DG GD S +T LNY G+FP
Sbjct: 370 LRLKRPWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFP 419
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 116/236 (49%), Gaps = 43/236 (18%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q LI D+HGV W+FRHIYRG PRRHLLTTGWS FV+ K LV+GD+V+F+++ GE+ +G
Sbjct: 215 QELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLG 274
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNG--KGKLSPKSVAEA 167
+RRA+R RNG + S +
Sbjct: 275 IRRAAR------------------------------------PRNGLPDSIIEKNSCSNI 298
Query: 168 MELAAQDMP----FEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRL 223
+ L A + F V Y P+A ++FV+ E +IR G R +M E DDS
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPER 358
Query: 224 TWFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGL 279
G+V+ V D WP S WR L + WDE V + VSPW+++ + P L
Sbjct: 359 RC-AGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHL 413
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W FRHI+RG PRRHLL +GWS FV+SK+LVAGD+ +F++ GE+ V
Sbjct: 201 TQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRV 260
Query: 109 GLRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVA 165
G+RRA R G + S +G +A
Sbjct: 261 GVRRAMRQQGNVPSSVISSHSMHLGV--------------------------------LA 288
Query: 166 EAMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTW 225
A + F V Y P+ S+F+V + E+++ +S GMR KM E +++
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR- 347
Query: 226 FQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTV-FP 284
F G + + SD WP+S WR L++ WDE + VSPW+VE P L V P
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMP 407
Query: 285 PTKR 288
KR
Sbjct: 408 RPKR 411
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W FRHI+RG PRRHLL +GWS FV+SK+LVAGD+ +F++ GE+ V
Sbjct: 201 TQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRV 260
Query: 109 GLRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVA 165
G+RRA R G + S +G +A
Sbjct: 261 GVRRAMRQQGNVPSSVISSHSMHLGV--------------------------------LA 288
Query: 166 EAMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTW 225
A + F V Y P+ S+F+V + E+++ +S GMR KM E +++
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR- 347
Query: 226 FQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTV-FP 284
F G + + SD WP+S WR L++ WDE + VSPW+VE P L V P
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMP 407
Query: 285 PTKR 288
KR
Sbjct: 408 RPKR 411
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W FRHI+RG PRRHLL +GWS FV+SK+LVAGD+ +F++ GE+ V
Sbjct: 201 TQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRV 260
Query: 109 GLRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVA 165
G+RRA R G + S +G +A
Sbjct: 261 GVRRAMRQQGNVPSSVISSHSMHLGV--------------------------------LA 288
Query: 166 EAMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTW 225
A + F V Y P+ S+F+V + E+++ +S GMR KM E +++
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR- 347
Query: 226 FQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTV-FP 284
F G + + SD WP+S WR L++ WDE + VSPW+VE P L V P
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMP 407
Query: 285 PTKR 288
KR
Sbjct: 408 RPKR 411
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W FRHI+RG PRRHLL +GWS FV+SK+LVAGD+ +F++ GE+ V
Sbjct: 201 TQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRV 260
Query: 109 GLRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVA 165
G+RRA R G + S +G +A
Sbjct: 261 GVRRAMRQQGNVPSSVISSHSMHLGV--------------------------------LA 288
Query: 166 EAMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTW 225
A + F V Y P+ S+F+V + E+++ +S GMR KM E +++
Sbjct: 289 TAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR- 347
Query: 226 FQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTV-FP 284
F G + + SD WP+S WR L++ WDE + VSPW+VE P L V P
Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMP 407
Query: 285 PTKR 288
KR
Sbjct: 408 RPKR 411
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 118/247 (47%), Gaps = 57/247 (23%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L++ D+H W FRHIYRG P+RHLLTTGWS FV SK+L AGDSV+F+++ + ++ VG
Sbjct: 196 QELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVG 255
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSV--AEA 167
+RRA+R + P SV A++
Sbjct: 256 VRRANR----------------------------------------QQTALPSSVLSADS 275
Query: 168 MELAA---------QDMPFEVVYYPKAGWSDFVVKAEAVEEAIR-VRWSPGMRVKMAVET 217
M + PF + Y P+A ++FV+ +AI + S GMR M ET
Sbjct: 276 MHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFET 335
Query: 218 DDSSRLTWFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTP 277
+DS + + G + +S D WP S WR LQ+ WDEP VSPW +E TP
Sbjct: 336 EDSGKRRYM-GTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE----TP 390
Query: 278 GLHTVFP 284
+FP
Sbjct: 391 ESLFIFP 397
>ATMG00940.1 | Symbols: ORF164 | DNA binding | chrM:251403-251897
REVERSE LENGTH=164
Length = 164
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 94/160 (58%), Gaps = 16/160 (10%)
Query: 99 MKNPRGEMFVGLRRA--------SRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXG 150
M+ EMF+G+RRA + F GG + G
Sbjct: 1 MRKSADEMFIGVRRAPISSNVGGTSFYGGDEYC-------SYYQSNGGVAKEDDGSAKKG 53
Query: 151 FSRNGKGKLSPKSVAEAMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMR 210
F R GKGKL+ ++V+EA+ AAQ +PFEVVYYP AGWSDFVVKAE VE ++ + W+PG R
Sbjct: 54 FRRTGKGKLTAEAVSEAINRAAQGLPFEVVYYPTAGWSDFVVKAEDVEASMAIFWTPGTR 113
Query: 211 VKMAVETDDSSRLTWFQGMVSSVSFSDNAPWPRSPWRMLQ 250
VKMA+ET+DSSR+TWFQG+V ++ + PW SPW +
Sbjct: 114 VKMAMETEDSSRITWFQGIV-FYTYQETGPWRGSPWNSFR 152
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 110/232 (47%), Gaps = 33/232 (14%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG W F+HI+RG PRRHLLTTGWS FV+SK+LVAGD+ VF++ G++ VG
Sbjct: 166 QELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVG 225
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RR +R + + P +A A
Sbjct: 226 VRRLARH-------QSTMPTSVISSQSMHLGV----------------------LATASH 256
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F V Y P+ S F+V EAI+ +S G R +M E ++S + +
Sbjct: 257 AVRTTTIFVVFYKPRI--SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTI 314
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHT 281
V S S WP S WR LQ+ WDEP +Q VSPW++E T + T
Sbjct: 315 VGSGDLSSQ--WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIST 364
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 120/252 (47%), Gaps = 32/252 (12%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q ++ D+H W FRHIYRG P+RHLLTTGWS FV++K+L AGDSV+F+++ + ++ +
Sbjct: 163 AQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLML 222
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAM 168
G+RR A R P S + +A A
Sbjct: 223 GIRR----------ANRQTPT-------------------LSSSVISSDSMHIGILAAAA 253
Query: 169 ELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQG 228
A PF + + P+A S+FVV +A+ + S GMR +M ET+D + + G
Sbjct: 254 HANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMG 312
Query: 229 MVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTKR 288
V+ +S D W S WR LQ+ WDE VS W++E V T + PP R
Sbjct: 313 TVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP--FYICPPPFFR 370
Query: 289 FKAAQGSGMFAD 300
K + GM D
Sbjct: 371 PKYPRQPGMPDD 382
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 123/258 (47%), Gaps = 36/258 (13%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG W F+HI+RG PRRHLLTTGWS FV SK+LVAGD+ VF++ G++ VG
Sbjct: 162 QELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVG 221
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RR ++ + + P R G +A A
Sbjct: 222 VRRLAK-------QQSTMPASVISSQSM---------------RLG-------VLATASH 252
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F V Y P+ S F++ A++ +S GMR +M E ++S + +
Sbjct: 253 AVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTI 310
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTKRF 289
+ S S WP S WR LQI WDEP +Q VSPW++E S + T PT++
Sbjct: 311 IGSGDLSSQ--WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT---PTQQQ 365
Query: 290 KAAQGSGMFADGEGDPFS 307
++ S ++ G P +
Sbjct: 366 SKSKRSRPISEITGSPVA 383
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 123/258 (47%), Gaps = 36/258 (13%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG W F+HI+RG PRRHLLTTGWS FV SK+LVAGD+ VF++ G++ VG
Sbjct: 75 QELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVG 134
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RR ++ + + P R G +A A
Sbjct: 135 VRRLAK-------QQSTMPASVISSQSM---------------RLG-------VLATASH 165
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F V Y P+ S F++ A++ +S GMR +M E ++S + +
Sbjct: 166 AVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTI 223
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTKRF 289
+ S S WP S WR LQI WDEP +Q VSPW++E S + T PT++
Sbjct: 224 IGSGDLSSQ--WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT---PTQQQ 278
Query: 290 KAAQGSGMFADGEGDPFS 307
++ S ++ G P +
Sbjct: 279 SKSKRSRPISEITGSPVA 296
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 128/269 (47%), Gaps = 36/269 (13%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG W F+HI+RG PRRHLLTTGWS FV SK+LVAGD+ VF++ G++ VG
Sbjct: 183 QELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVG 242
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RR ++ + + P R G +A A
Sbjct: 243 VRRLAK-------QQSTMPASVISSQSM---------------RLG-------VLATASH 273
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F V Y P+ S F++ A++ +S GMR +M E ++S + +
Sbjct: 274 AVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTI 331
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTKRF 289
+ S S WP S WR LQI WDEP +Q VSPW++E S + T PT++
Sbjct: 332 IGSGDLSSQ--WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT---PTQQQ 386
Query: 290 KAAQGSGMFADGEGDPFSMTRFTNSTMGH 318
++ S ++ G P + + ++ + H
Sbjct: 387 SKSKRSRPISEITGSPVASSFLSSFSQSH 415
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 109/226 (48%), Gaps = 41/226 (18%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ DVHG W+F+HI+RG PRRHLLTTGWS FV SK+LVAGD+ VF++ GE+ VG
Sbjct: 154 QELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVG 213
Query: 110 LRRAS---RFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAE 166
+RRA+ + S +G V
Sbjct: 214 VRRANLQQSSMPSSVISSHSMHLG---------------------------------VLA 240
Query: 167 AMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWF 226
A Q +VYY K S F++ EA+ ++S GMR KM E +DS +
Sbjct: 241 TARHATQTKTMFIVYY-KPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-Y 298
Query: 227 QGMVSSVSFSDNAP-WPRSPWRMLQITWDEPEVLQTSKWVSPWQVE 271
G V + D +P W S WR L++ WDEP + VSPW++E
Sbjct: 299 SGTV--IGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 109/226 (48%), Gaps = 41/226 (18%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ DVHG W+F+HI+RG PRRHLLTTGWS FV SK+LVAGD+ VF++ GE+ VG
Sbjct: 154 QELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVG 213
Query: 110 LRRAS---RFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAE 166
+RRA+ + S +G V
Sbjct: 214 VRRANLQQSSMPSSVISSHSMHLG---------------------------------VLA 240
Query: 167 AMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWF 226
A Q +VYY K S F++ EA+ ++S GMR KM E +DS +
Sbjct: 241 TARHATQTKTMFIVYY-KPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-Y 298
Query: 227 QGMVSSVSFSDNAP-WPRSPWRMLQITWDEPEVLQTSKWVSPWQVE 271
G V + D +P W S WR L++ WDEP + VSPW++E
Sbjct: 299 SGTV--IGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 118/257 (45%), Gaps = 36/257 (14%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ TD+H W FRHI+RG PRRHLLTTGWS FV+SKKLVAGD+ +F++ E+ VG
Sbjct: 162 QELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVG 221
Query: 110 LRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAE 166
+RR R + S IG +A
Sbjct: 222 VRRHMRQQTNIPSSVISSHSMHIGV--------------------------------LAT 249
Query: 167 AMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWF 226
A F V Y P+ S+F+V EA + S GMR KM E +++ F
Sbjct: 250 AAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE-KRF 308
Query: 227 QGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPT 286
G + V + ++ W S WR L++ WDEP + + VSPW++E + + P
Sbjct: 309 SGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPP 368
Query: 287 KRFKAAQGSGMFADGEG 303
+R K + G+ + G
Sbjct: 369 QRNKRPRPPGLPSPATG 385
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 118/257 (45%), Gaps = 36/257 (14%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ TD+H W FRHI+RG PRRHLLTTGWS FV+SKKLVAGD+ +F++ E+ VG
Sbjct: 162 QELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVG 221
Query: 110 LRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAE 166
+RR R + S IG +A
Sbjct: 222 VRRHMRQQTNIPSSVISSHSMHIGV--------------------------------LAT 249
Query: 167 AMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWF 226
A F V Y P+ S+F+V EA + S GMR KM E +++ F
Sbjct: 250 AAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE-KRF 308
Query: 227 QGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPT 286
G + V + ++ W S WR L++ WDEP + + VSPW++E + + P
Sbjct: 309 SGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPP 368
Query: 287 KRFKAAQGSGMFADGEG 303
+R K + G+ + G
Sbjct: 369 QRNKRPRPPGLPSPATG 385
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 118/257 (45%), Gaps = 36/257 (14%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ TD+H W FRHI+RG PRRHLLTTGWS FV+SKKLVAGD+ +F++ E+ VG
Sbjct: 162 QELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVG 221
Query: 110 LRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAE 166
+RR R + S IG +A
Sbjct: 222 VRRHMRQQTNIPSSVISSHSMHIGV--------------------------------LAT 249
Query: 167 AMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWF 226
A F V Y P+ S+F+V EA + S GMR KM E +++ F
Sbjct: 250 AAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE-KRF 308
Query: 227 QGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPT 286
G + V + ++ W S WR L++ WDEP + + VSPW++E + + P
Sbjct: 309 SGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPP 368
Query: 287 KRFKAAQGSGMFADGEG 303
+R K + G+ + G
Sbjct: 369 QRNKRPRPPGLPSPATG 385
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 118/257 (45%), Gaps = 36/257 (14%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ TD+H W FRHI+RG PRRHLLTTGWS FV+SKKLVAGD+ +F++ E+ VG
Sbjct: 162 QELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVG 221
Query: 110 LRRASRFAGGGDG---ARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAE 166
+RR R + S IG +A
Sbjct: 222 VRRHMRQQTNIPSSVISSHSMHIGV--------------------------------LAT 249
Query: 167 AMELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWF 226
A F V Y P+ S+F+V EA + S GMR KM E +++ F
Sbjct: 250 AAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE-KRF 308
Query: 227 QGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPT 286
G + V + ++ W S WR L++ WDEP + + VSPW++E + + P
Sbjct: 309 SGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPP 368
Query: 287 KRFKAAQGSGMFADGEG 303
+R K + G+ + G
Sbjct: 369 QRNKRPRPPGLPSPATG 385
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 123/248 (49%), Gaps = 53/248 (21%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W+FRHI+RG P+RHLLTTGWS FV++K+LVAGDSV+F+ N + ++ +
Sbjct: 166 AQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLL 225
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSV--AE 166
G+RRA N + P SV ++
Sbjct: 226 GIRRA----------------------------------------NRPQTVMPSSVLSSD 245
Query: 167 AMELA---------AQDMPFEVVYYPKAGWSDFVVK-AEAVEEAIRVRWSPGMRVKMAVE 216
+M L A + F + Y P+A S+FV+ A+ V+ R S GMR +M E
Sbjct: 246 SMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFE 305
Query: 217 TDDSSRLTWFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTT 276
T++SS + + G ++ + D W S WR +++ WDE + VS W++E ++T
Sbjct: 306 TEESS-VRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 364
Query: 277 PGLHTVFP 284
P + FP
Sbjct: 365 PMYPSPFP 372
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 123/248 (49%), Gaps = 53/248 (21%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W+FRHI+RG P+RHLLTTGWS FV++K+LVAGDSV+F+ N + ++ +
Sbjct: 164 AQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLL 223
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSV--AE 166
G+RRA N + P SV ++
Sbjct: 224 GIRRA----------------------------------------NRPQTVMPSSVLSSD 243
Query: 167 AMELA---------AQDMPFEVVYYPKAGWSDFVVK-AEAVEEAIRVRWSPGMRVKMAVE 216
+M L A + F + Y P+A S+FV+ A+ V+ R S GMR +M E
Sbjct: 244 SMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFE 303
Query: 217 TDDSSRLTWFQGMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTT 276
T++SS + + G ++ + D W S WR +++ WDE + VS W++E ++T
Sbjct: 304 TEESS-VRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362
Query: 277 PGLHTVFP 284
P + FP
Sbjct: 363 PMYPSPFP 370
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG W FRH YRGTP+RHLLTTGW++F SKKLV GD +VF++ GE+ VG
Sbjct: 169 QELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVG 228
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RRA G + S R+G +A A
Sbjct: 229 IRRARHQQGNIPSSIVSI----------------------DCMRHG-------VIASAKH 259
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F VVY P++ S F+V + +A+ +++ G R M E DD S +F +
Sbjct: 260 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTI 317
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLH---TVFPPT 286
+ +FS + W S WR L++ WDE VSPW++E + P L+ + F
Sbjct: 318 IGVSNFSPH--WKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL--MPALNVPRSSFLKN 373
Query: 287 KRFKAAQGSG 296
KR + G
Sbjct: 374 KRLREVNEFG 383
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 116/250 (46%), Gaps = 38/250 (15%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ TD+HG W F H YRGTP+RHLLTTGW+ F SKKLVAGD +VF++ GE+ VG
Sbjct: 162 QELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVG 221
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RRA G + S R+G +A A
Sbjct: 222 IRRAGHQQGNIPSSIIS----------------------IESMRHG-------VIASAKH 252
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F VVY P++ S F+V + +A+ +++ G R M E DD S +F +
Sbjct: 253 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTI 310
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFP---PT 286
+ FS + W S WR L++ WDE VSPW++E + P L+ P
Sbjct: 311 IGVSDFSPH--WKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNVPRPSLLKN 366
Query: 287 KRFKAAQGSG 296
KR + G
Sbjct: 367 KRLREVNEIG 376
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 107/224 (47%), Gaps = 33/224 (14%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG W F H YRGTP+RHLLTTGW+ F SKKLVAGD +VF++ GE+ VG
Sbjct: 164 QELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVG 223
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RRA G + S R+G VA A
Sbjct: 224 IRRARHQQGNIPSSIVSI----------------------DCMRHG-------VVASAKH 254
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F VVY P++ S F+V + +A+ +++ G R M +E DD S F +
Sbjct: 255 AFDNQCMFTVVYKPRS--SKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTI 312
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQV 273
+ FS + W S WR L++ WDE K VSPW +E +
Sbjct: 313 IGVSDFSPH--WKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL 354
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 122/257 (47%), Gaps = 34/257 (13%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W FRHIYRG P+RHLLTTGWS FV++K+L AGDSV+F+++ + ++ +
Sbjct: 164 CQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLL 223
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAM 168
G+RR A R P S + +A A
Sbjct: 224 GIRR----------ANRQQP-------------------ALSSSVISSDSMHIGVLAAAA 254
Query: 169 ELAAQDMPFEVVYYPK-AGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQ 227
A + PF + Y P+ A ++FVV +A+ + S GMR +M ET++ + +
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYM 313
Query: 228 GMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTK 287
G V+ +S D W S WR LQI WDE VS W +E V T + PP
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFF 371
Query: 288 RFKAAQGSGMFADGEGD 304
R + + GM D E D
Sbjct: 372 RPRFSGQPGM-PDDETD 387
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 122/257 (47%), Gaps = 34/257 (13%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W FRHIYRG P+RHLLTTGWS FV++K+L AGDSV+F+++ + ++ +
Sbjct: 164 CQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLL 223
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAM 168
G+RR A R P S + +A A
Sbjct: 224 GIRR----------ANRQQP-------------------ALSSSVISSDSMHIGVLAAAA 254
Query: 169 ELAAQDMPFEVVYYPK-AGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQ 227
A + PF + Y P+ A ++FVV +A+ + S GMR +M ET++ + +
Sbjct: 255 HANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYM 313
Query: 228 GMVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTK 287
G V+ +S D W S WR LQI WDE VS W +E V T + PP
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFF 371
Query: 288 RFKAAQGSGMFADGEGD 304
R + + GM D E D
Sbjct: 372 RPRFSGQPGM-PDDETD 387
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q L+ D+HG W FRH YRGTP+RH LTTGW++F SKKLV GD +VF++ GE+ VG
Sbjct: 160 QELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVG 219
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RRA G + S R+G +A A
Sbjct: 220 IRRARHQQGNIPSSIVSI----------------------DCMRHG-------VIASAKH 250
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F VVY P S F+V + +A+ ++ G R M E DD S +F +
Sbjct: 251 ALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTI 310
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQV 273
+ FS + W S WR L++ WDE VSPW++E +
Sbjct: 311 IGVNDFSPH--WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL 352
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q ++ D+H W FRH YRGTP+RH LTTGW++F+ SKKLV GD +VF++ GE+ VG
Sbjct: 164 QEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVG 223
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RRA G + S R+G +A A
Sbjct: 224 IRRARHQQGNIPSSIVSI----------------------DCMRHG-------VIASAKH 254
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F VVY P++ S F+V + +A+ +++ G R M E DD S +F +
Sbjct: 255 AFDNQCIFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTI 312
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHT 281
+ FS + W S WR L++ WDE VSPW++E + P L+
Sbjct: 313 IGVSDFSPH--WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--VPALNV 360
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q ++ D+HG W FRHIYRGT +RHLLT GW+ F SKKLV GD +VF++ GE+ VG
Sbjct: 164 QEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVG 223
Query: 110 LRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAME 169
+RRA G + S R+G +A A
Sbjct: 224 IRRAGHQQGNIPSSIVSI----------------------ESMRHG-------IIASAKH 254
Query: 170 LAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQGM 229
F VVY P++ S F+V + + + +++ G R M E DD S F +
Sbjct: 255 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTI 312
Query: 230 VSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVS 274
+ FS + W S WR L++ WDE VSPW +E ++
Sbjct: 313 IGVSDFSPH--WKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLT 355
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 49 VQNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFV 108
Q L+ D+H W FRHIYRG P+RHLLTTGWS FV++K+L AGDSV+F+++ + ++ +
Sbjct: 164 CQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLL 223
Query: 109 GLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEAM 168
G+RRA+R + + SP ++
Sbjct: 224 GIRRANR--------------QQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNP 269
Query: 169 ELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQG 228
A + + Y KA ++ V +R R M ET++ + + G
Sbjct: 270 RAAPAEFVVPLAKYTKAMYAQ-------VSLGMRFR--------MIFETEECG-VRRYMG 313
Query: 229 MVSSVSFSDNAPWPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQVSTTPGLHTVFPPTKR 288
V+ +S D W S WR LQI WDE VS W +E V T + PP R
Sbjct: 314 TVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP--FYICPPPFFR 371
Query: 289 FKAAQGSGMFADGEGD 304
+ + GM D E D
Sbjct: 372 PRFSGQPGM-PDDETD 386
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTT--GWSKFVNSKKLVAGDSVVFMKNPRGEMF 107
QNL+ D++G W F+H++RGTP+RH+ T+ GWS F +K+L+ GD V ++ GE+
Sbjct: 162 QNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELR 221
Query: 108 VGLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEA 167
G+RRA G + S N SV A
Sbjct: 222 FGIRRAKHQQGHIPSS--------------------------VISANCMQHGVIASVVNA 255
Query: 168 MELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQ 227
+ F VVY P + S FV+ + +A+ + G R +M E D S +
Sbjct: 256 FKTKCM---FNVVYKPSS--SQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE-KRYD 309
Query: 228 GMVSSVSFSDNAP-WPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQV 273
G + + +D +P W S WR L++ WDE VSPW +E +
Sbjct: 310 GTI--IGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 354
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 89/227 (39%), Gaps = 63/227 (27%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTT--GWSKFVNSKKLVAGDSVVFMKNPRGEMF 107
QNL+ D++G W F+H++RGTP+RH+ T+ GWS F +K+L+ GD V ++ GE+
Sbjct: 162 QNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELR 221
Query: 108 VGLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEA 167
G+RRA G + S N SV A
Sbjct: 222 FGIRRAKHQQGHIPSS--------------------------VISANCMQHGVIASVVNA 255
Query: 168 MELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQ 227
+ F VVY P +M E D S +
Sbjct: 256 FKTKCM---FNVVYKP----------------------------RMQFEGKDFSE-KRYD 283
Query: 228 GMVSSVSFSDNAP-WPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQV 273
G + V +D +P W S WR L++ WDE VSPW +E +
Sbjct: 284 GTIIGV--NDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 89/227 (39%), Gaps = 63/227 (27%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTT--GWSKFVNSKKLVAGDSVVFMKNPRGEMF 107
QNL+ D++G W F+H++RGTP+RH+ T+ GWS F +K+L+ GD V ++ GE+
Sbjct: 162 QNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELR 221
Query: 108 VGLRRASRFAGGGDGARRSFPIGXXXXXXXXXXXXXXXXXXXGFSRNGKGKLSPKSVAEA 167
G+RRA G + S N SV A
Sbjct: 222 FGIRRAKHQQGHIPSS--------------------------VISANCMQHGVIASVVNA 255
Query: 168 MELAAQDMPFEVVYYPKAGWSDFVVKAEAVEEAIRVRWSPGMRVKMAVETDDSSRLTWFQ 227
+ F VVY P +M E D S +
Sbjct: 256 FKTKCM---FNVVYKP----------------------------RMQFEGKDFSE-KRYD 283
Query: 228 GMVSSVSFSDNAP-WPRSPWRMLQITWDEPEVLQTSKWVSPWQVEQV 273
G + V+ D +P W S WR L++ WDE VSPW +E +
Sbjct: 284 GTIIGVN--DMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 50 QNLIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGEMFVG 109
Q LI D+HG W F+H YR PR TTGW+ F SKKLV GD +VF + GE+ VG
Sbjct: 164 QELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVG 220
Query: 110 LR 111
+R
Sbjct: 221 IR 222
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 52 LIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPR--GEMFVG 109
L D G W FR+ Y + + ++LT GWS++V K L AGD V+F ++ G F+G
Sbjct: 80 LCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIG 139
Query: 110 LRR 112
RR
Sbjct: 140 WRR 142
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 52 LIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPR--GEMFVG 109
L D G W FR+ Y + + ++LT GWS++V K L AGD V+F ++ G F+G
Sbjct: 80 LCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIG 139
Query: 110 LRR 112
RR
Sbjct: 140 WRR 142
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 52 LIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMK--NPRGEMFVG 109
L DV+G W FR+ Y + + ++LT GWS+FV K+L AGD + F + + + F+G
Sbjct: 225 LNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIG 284
Query: 110 LRRAS 114
+ S
Sbjct: 285 WKSKS 289
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 52 LIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMK 100
L D +G W FR+ Y + + +++T GWS+FV KKL AGD+V F +
Sbjct: 73 LDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 52 LIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGE---MFV 108
L D G +W FR+ Y + + ++LT GWS+FV K+L GD VVF + R + +F+
Sbjct: 95 LSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGD-VVFFQRHRSDSRRLFI 153
Query: 109 GLRR 112
G RR
Sbjct: 154 GWRR 157
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 52 LIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNPRGE---MFV 108
L D G +W FR+ Y + + ++LT GWS+FV K+L GD VVF + R + +F+
Sbjct: 95 LSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGD-VVFFQRHRSDSRRLFI 153
Query: 109 GLRR 112
G RR
Sbjct: 154 GWRR 157
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 52 LIITDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMK 100
L DV+G W FR+ Y + + ++LT GWS+FV K L AGD V F +
Sbjct: 228 LNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSR 276
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 56 DVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMK 100
DV+G W FR+ Y + + ++LT GWS+FV K L AGD V F +
Sbjct: 233 DVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 56 DVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMK 100
DV+G W FR+ Y + + ++LT GWS+FV K L AGD V F +
Sbjct: 233 DVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277