Miyakogusa Predicted Gene

Lj1g3v0726950.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0726950.2 tr|G7JS13|G7JS13_MEDTR
Phosphopantothenate-cysteine ligase OS=Medicago truncatula
GN=MTR_4g112080 PE,82.77,0,CoaB-like,DNA/pantothenate metabolism
flavoprotein, C-terminal; DFP,DNA/pantothenate metabolism
flav,CUFF.26259.2
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12350.1 | Symbols: ATCOAB, COAB | 4-phospho-panto-thenoylcys...   395   e-110
AT5G02080.1 | Symbols:  | DNA / pantothenate metabolism flavopro...   352   3e-97

>AT1G12350.1 | Symbols: ATCOAB, COAB |
           4-phospho-panto-thenoylcysteine synthetase |
           chr1:4198870-4200633 FORWARD LENGTH=317
          Length = 317

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/310 (64%), Positives = 243/310 (78%), Gaps = 2/310 (0%)

Query: 14  LEAQVQAFFDSAPPLRNIHEITEKLNQFIHRNSSPANGEPRRIVCVTSGGTTAPLEQRCV 73
           +E ++ +FF+S+PPL+N  EI   LNQFI  NSS   G  RRIVCVTSGGTT PLEQRCV
Sbjct: 8   VEDEISSFFESSPPLKNKEEIVANLNQFIELNSS-CQGGMRRIVCVTSGGTTVPLEQRCV 66

Query: 74  RYVDNFSSGHRGATSTEYFLKAGYAVIFLCRRGSFQPFCRSLPDDPLIECFEPTTNELNI 133
           RY+DNFSSG+RGA STE F+KAGYAVIFL RRG+ QP+CR LPDDP +ECFE   +  NI
Sbjct: 67  RYIDNFSSGNRGAASTENFVKAGYAVIFLYRRGTCQPYCRYLPDDPFLECFE-FPDAKNI 125

Query: 134 QVREAYSEPVKRAIVDHHAAVAGGHLLKLPFNTIFEYLQMLQLIAMSMRCVGPRAMFYLA 193
           QV  ++S  VK A++D  AAVA G LLKLPF+TI+EYLQML+LIA  ++ VGP +MFYLA
Sbjct: 126 QVHGSHSGAVKMAVMDQQAAVAEGRLLKLPFSTIYEYLQMLRLIATILKDVGPCSMFYLA 185

Query: 194 AAVSDYYVPWKEMVEHKIQSGSHLLDVKLVQVPKMLSVLRKDWAPLAFCVSFKLETDSSI 253
           AAVSD+YVPW  M EHKI+SGS  LD++L QVPKMLS+LR +WAP AFC+SFKLETDS I
Sbjct: 186 AAVSDFYVPWLSMTEHKIESGSGPLDIRLAQVPKMLSILRSNWAPKAFCISFKLETDSKI 245

Query: 254 LLTKAGTALEKYKMHAVVANELSTRKEQVVVVTGAEKIKVQRDKSMSVNDVEDPLINLLS 313
           LL KA  AL+KYK+HAVVANEL TRKE+VVVV+ +  + V+RD +   + VED LI LL 
Sbjct: 246 LLEKATKALQKYKVHAVVANELLTRKEEVVVVSSSGNVVVRRDSNKPESIVEDNLIRLLV 305

Query: 314 ERHGPYIEAS 323
           +RH  YI+ S
Sbjct: 306 DRHSTYIKES 315


>AT5G02080.1 | Symbols:  | DNA / pantothenate metabolism
           flavoprotein | chr5:409811-411557 FORWARD LENGTH=270
          Length = 270

 Score =  352 bits (902), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 184/293 (62%), Positives = 220/293 (75%), Gaps = 25/293 (8%)

Query: 31  IHEITEKLNQFIHRNSSPANGEPRRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRGATSTE 90
           + EI E LN+FI  NSS   G  RRIVCVTSGGTT PLEQRCVRY+DNFSSG+RGA STE
Sbjct: 1   MEEILENLNEFIKLNSSSQGG--RRIVCVTSGGTTVPLEQRCVRYIDNFSSGNRGAASTE 58

Query: 91  YFLKAGYAVIFLCRRGSFQPFCRSLPDDPLIECFEPTTNELNIQVREAYSEPVKRAIVDH 150
            F+KAGYAVIFL RRG+ QP+CRSLPDDP +ECFE  +++ NIQ                
Sbjct: 59  NFVKAGYAVIFLYRRGTCQPYCRSLPDDPFLECFE-FSDKTNIQ---------------- 101

Query: 151 HAAVAGGHLLKLPFNTIFEYLQMLQLIAMSMRCVGPRAMFYLAAAVSDYYVPWKEMVEHK 210
                 G LLKLPF+TI+EYLQML+LIA +++ VGP +MFYLAAAVSD+YVPWK M EHK
Sbjct: 102 ------GSLLKLPFSTIYEYLQMLRLIAEALKDVGPCSMFYLAAAVSDFYVPWKSMTEHK 155

Query: 211 IQSGSHLLDVKLVQVPKMLSVLRKDWAPLAFCVSFKLETDSSILLTKAGTALEKYKMHAV 270
           I+SGS  LD++L QVPKMLSVLR +WAP AFC+SFKLETDS IL+ KA  AL KYK+HAV
Sbjct: 156 IESGSGPLDIRLAQVPKMLSVLRSNWAPKAFCISFKLETDSKILMEKATKALRKYKVHAV 215

Query: 271 VANELSTRKEQVVVVTGAEKIKVQRDKSMSVNDVEDPLINLLSERHGPYIEAS 323
           VANELSTRKE+VVVV+ +  + V+R+     + VED LI L+ +RH  YI+ S
Sbjct: 216 VANELSTRKEEVVVVSSSGNVVVRRECDKPESFVEDNLIRLIVDRHSTYIKES 268