Miyakogusa Predicted Gene

Lj1g3v0683890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0683890.1 CUFF.26168.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52570.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   296   1e-80
AT4G10030.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   125   3e-29

>AT3G52570.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:19501145-19502795 FORWARD LENGTH=335
          Length = 335

 Score =  296 bits (757), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 153/280 (54%), Positives = 190/280 (67%), Gaps = 12/280 (4%)

Query: 5   LRNRSNSHLHHLTRFLNSP--------SRRWLQTVAYEELRAHPDKPYTSTAFIIHGFLG 56
           + NR  S    L RFL SP        S R LQT+AYEE+R   D+   STA I+HG LG
Sbjct: 7   ITNRFESRF--LIRFLESPTLFASCFTSSRSLQTLAYEEVRTSGDRESESTALILHGLLG 64

Query: 57  SARNWRSFXXXXXXXXXXXXXXXXWRMVMLDMRNHGQSAE-RKLNPPHXXXXXXXXXXXX 115
           S RNWRS                 W+M+++D+RNHG+SAE   LNPPH            
Sbjct: 65  SGRNWRS-FSRSLASSLSVSSASDWKMILVDLRNHGRSAEVEGLNPPHDLVNSAKDLADL 123

Query: 116 VKTEGWSWPEVVIGHSMGGKVALQFAQSCSRGDYGDSAVLPKQLWVLDSVPGEVNSENSN 175
           VK  GW+WP+VVIGHS+GGKVALQF +SC+RGD+G+SA  PKQLWVLDSVPGEV +E S+
Sbjct: 124 VKASGWNWPDVVIGHSLGGKVALQFMESCARGDFGESASPPKQLWVLDSVPGEVKAEKSD 183

Query: 176 EEIRDILATLQSLPSQIPSRKWLVSHLMGLGYSKALSDWIGTNLKKVGDHETWIFDLQNA 235
            E+  +L TLQSLPS IPSRKWLV  ++ LG+S++LS+WIG+NLK+ GD ETW F+L  A
Sbjct: 184 GEVEKVLKTLQSLPSSIPSRKWLVDRMVELGFSRSLSEWIGSNLKRSGDSETWTFNLDGA 243

Query: 236 KEMFDSFCKKSYWNLLENPPKGMEIVIVRAEKSDRWDQEA 275
            +MF+S+ + SYW+LLENPPK  EI  V AEKSDRWD + 
Sbjct: 244 VQMFNSYRETSYWSLLENPPKETEINFVIAEKSDRWDNDT 283


>AT4G10030.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr4:6270490-6273098 REVERSE LENGTH=380
          Length = 380

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 17/239 (7%)

Query: 43  PYTSTAFIIHGFLGSARNWRSFXXXXXXXXXXXXXXXXWRMVMLDMRNHGQSAERKLNPP 102
           P T TA ++HG LGS +NW +F                W+ +++D+R HG S   K   P
Sbjct: 104 PDTPTAVLLHGILGSGKNWGTFARRLAHEFPT------WQFLLVDLRCHGDSTSLKKRGP 157

Query: 103 HXXXXXXXXXXXXVKTEGWSWPEVVIGHSMGGKVALQFAQSCSRGDYGDSAVLPKQLWVL 162
           H            V     + P V++GHS GGKV L   +  ++         P + WVL
Sbjct: 158 HSVATTASDVLKLVGQLRLT-PRVLVGHSFGGKVVLSMVEQAAK-----PLPRPVRAWVL 211

Query: 163 DSVPGEVNSENSNEE-IRDILATLQSLPSQIPSRKWLVSHLMGLGYSKALSDWIGTNLKK 221
           D+ PG+V +    E+  R++++ L+ LP  + S++ ++  L+  G+S  ++ W+ TNL+ 
Sbjct: 212 DATPGKVRAGGDGEDHPRELISFLRKLPKVVLSKREVLKALINEGFSNDVAQWVITNLRP 271

Query: 222 VGDHET---WIFDLQNAKEMFDSFCKKSYWNLLENPPKGMEIVIVRAEKS-DRWDQEAI 276
            G   +   W FDL    E++ S+ + + WN +EN P+G+ +  ++AE+S  RW  E +
Sbjct: 272 TGPSASSFSWTFDLDGIAELYQSYEETNLWNFVENLPRGVHVNFLKAERSLHRWALEDL 330