Miyakogusa Predicted Gene

Lj1g3v0682850.5

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0682850.5 Non Chatacterized Hit- tr|J3LBR2|J3LBR2_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=CPS1 P,49,5e-19,no
description,Terpenoid synthase; seg,NULL; Terpene_synth_C,Terpene
synthase, metal-binding domain;,CUFF.26241.5
         (225 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02780.1 | Symbols: GA1, ABC33, ATCPS1, CPS, CPS1 | Terpenoid...   103   1e-22

>AT4G02780.1 | Symbols: GA1, ABC33, ATCPS1, CPS, CPS1 | Terpenoid
           cyclases/Protein prenyltransferases superfamily protein
           | chr4:1237881-1244766 REVERSE LENGTH=802
          Length = 802

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 102/216 (47%), Gaps = 12/216 (5%)

Query: 1   MAYVNNNNYLELAKLDYNSCQALHQTEWGEIQKWYXXXXXXXXXXXXXXXXXXXXXXXXX 60
           M YVNNN YLELAK DYN+CQA HQ EW   QKWY                         
Sbjct: 513 MPYVNNNGYLELAKQDYNNCQAQHQLEWDIFQKWYEENRLSEWGVRRSELLECYYLAAAT 572

Query: 61  IFEPERYHVRLAWAKTTSLLETI-----ASYATDAEMRKDFMERFTDCINKRDYSIGR-- 113
           IFE ER H R+ WAK++ L++ I      S  +       F E   +      +   R  
Sbjct: 573 IFESERSHERMVWAKSSVLVKAISSSFGESSDSRRSFSDQFHEYIANARRSDHHFNDRNM 632

Query: 114 RLNR--SKTGHGLAETLVATIDQISWGILVSHGHEIGTDMHHSWKKWLSSWQSGG--GDA 169
           RL+R  S     LA  L+ T++Q+S+ + +SHG ++   ++ SW  W+  W+  G  G+ 
Sbjct: 633 RLDRPGSVQASRLAGVLIGTLNQMSFDLFMSHGRDVNNLLYLSWGDWMEKWKLYGDEGEG 692

Query: 170 ELLVQTINLSAGYWISEEQMLSPQYQRLLQLTNTLC 205
           EL+V+ I L     ++        + RL ++ N +C
Sbjct: 693 ELMVKMIILMKNNDLT-NFFTHTHFVRLAEIINRIC 727