Miyakogusa Predicted Gene

Lj1g3v0672350.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0672350.3 Non Chatacterized Hit- tr|I1LMG8|I1LMG8_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,85.37,0,CULLIN_2,Cullin homology; seg,NULL; Cullin,Cullin,
N-terminal; APC2,Anaphase-promoting complex subun,CUFF.26174.3
         (410 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04660.1 | Symbols: APC2 | anaphase-promoting complex/cycloso...   553   e-158
AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435 FO...    63   4e-10
AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...    63   4e-10
AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...    63   4e-10
AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...    63   4e-10
AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681...    54   1e-07
AT5G46210.1 | Symbols: CUL4, ATCUL4 | cullin4 | chr5:18731569-18...    54   2e-07
AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 |...    53   4e-07
AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B | chr1:2620216...    49   7e-06
AT1G43140.1 | Symbols:  | Cullin family protein | chr1:16232785-...    49   7e-06

>AT2G04660.1 | Symbols: APC2 | anaphase-promoting complex/cyclosome
           2 | chr2:1624933-1629039 FORWARD LENGTH=865
          Length = 865

 Score =  553 bits (1425), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 263/391 (67%), Positives = 318/391 (81%), Gaps = 9/391 (2%)

Query: 20  LLEELNRDEEIQENVGVDDDFNTDDREAWINASRWQPDPVEADPLKGSRNQRKVDILGMI 79
           LLEEL RDEE QENVG DDDF+TDD++AWINASRW+PDPVEADPLKGS +QRKVDILGM+
Sbjct: 484 LLEELMRDEESQENVGFDDDFHTDDKQAWINASRWEPDPVEADPLKGSLSQRKVDILGML 543

Query: 80  VGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           V IIGSK+QLV+EYR MLAEKLLNK+DYDID+EIRT+ELLKIHFGE+S+Q+CEIMLNDLI
Sbjct: 544 VDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCEIMLNDLI 603

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
            SKR+N+NIK    + SQT  E+ +N +S+D + +TI+S+NFWPPIQ EPL LP PVDKL
Sbjct: 604 DSKRVNTNIK----KASQTGAELRENELSVDTLTSTILSTNFWPPIQDEPLELPGPVDKL 659

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQDQTSWTS 259
           LSDYA R++EIKTPRKL WKK+LGTVKLELQ +DR +QFTV+P HA+IIM FQ++ SWT 
Sbjct: 660 LSDYANRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKKSWTY 719

Query: 260 KNLAAAVGIPVDALNRRMSFWISKGVVAESSGGDSSDHVYTIMESMVETKKRDSSGITQX 319
           K+LA  +GIP+DALNRR++FWISKGV+ ES+G +S+  V T++ES+ ++ K         
Sbjct: 720 KDLAEVIGIPIDALNRRVNFWISKGVLRESTGANSNSSVLTLVESITDSGKN-----EGE 774

Query: 320 XXXXXXXXXXRAVASIENQLRKEMSIYEKFIMGMLTNFGSMALDRIHNRLKMFCIADPPY 379
                      ++AS+E+QLRKEM+IYEKFIMGMLTNFGSMAL+RIHN LKMFC+ADP Y
Sbjct: 775 ELLTGEEEGETSIASVEDQLRKEMTIYEKFIMGMLTNFGSMALERIHNTLKMFCVADPSY 834

Query: 380 DKXXXXXXXXXXGLVSEEKLELRDGMYTPKK 410
           DK          GLVSEEKLE RDGMY  KK
Sbjct: 835 DKSLQQLQSFLSGLVSEEKLEFRDGMYLLKK 865


>AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435
           FORWARD LENGTH=738
          Length = 738

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + D E   L  LK   G     K E M+ DL
Sbjct: 419 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 478

Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
             ++   ++ +  +      N  +        ++  T++++ FWP  +   +NLP  + K
Sbjct: 479 TLARENQNSFEDYLGSNPAANPGI--------DLTVTVLTTGFWPSYKSFDINLPSEMIK 530

Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQ--DQT 255
            +  + K F E KT  RKL W  SLGT  +  +   + ++  V+   A++++ F   D+ 
Sbjct: 531 CVEVF-KGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKL 589

Query: 256 SWT 258
           S+T
Sbjct: 590 SYT 592


>AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + D E   L  LK   G     K E M+ DL
Sbjct: 419 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 478

Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
             ++   ++ +  +      N  +        ++  T++++ FWP  +   +NLP  + K
Sbjct: 479 TLARENQNSFEDYLGSNPAANPGI--------DLTVTVLTTGFWPSYKSFDINLPSEMIK 530

Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQ--DQT 255
            +  + K F E KT  RKL W  SLGT  +  +   + ++  V+   A++++ F   D+ 
Sbjct: 531 CVEVF-KGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKL 589

Query: 256 SWT 258
           S+T
Sbjct: 590 SYT 592


>AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + D E   L  LK   G     K E M+ DL
Sbjct: 419 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 478

Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
             ++   ++ +  +      N  +        ++  T++++ FWP  +   +NLP  + K
Sbjct: 479 TLARENQNSFEDYLGSNPAANPGI--------DLTVTVLTTGFWPSYKSFDINLPSEMIK 530

Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQ--DQT 255
            +  + K F E KT  RKL W  SLGT  +  +   + ++  V+   A++++ F   D+ 
Sbjct: 531 CVEVF-KGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKL 589

Query: 256 SWT 258
           S+T
Sbjct: 590 SYT 592


>AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDL 138
           ++  I  KD     YR  LA +LL     + D E   L  LK   G     K E M+ DL
Sbjct: 419 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 478

Query: 139 IGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDK 198
             ++   ++ +  +      N  +        ++  T++++ FWP  +   +NLP  + K
Sbjct: 479 TLARENQNSFEDYLGSNPAANPGI--------DLTVTVLTTGFWPSYKSFDINLPSEMIK 530

Query: 199 LLSDYAKRFNEIKTP-RKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQ--DQT 255
            +  + K F E KT  RKL W  SLGT  +  +   + ++  V+   A++++ F   D+ 
Sbjct: 531 CVEVF-KGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKL 589

Query: 256 SWT 258
           S+T
Sbjct: 590 SYT 592


>AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681212
           FORWARD LENGTH=742
          Length = 742

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 14/174 (8%)

Query: 83  IGSKDQLVHEYRTMLAEKLL---NKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLI 139
           I  KD     +R   A +LL   N +DY    E   L   K   G     K E ML D+ 
Sbjct: 427 ISDKDLFAEFFRKKQARRLLFDRNGNDY---HERSLLTKFKELLGAQFTSKMEGMLTDMT 483

Query: 140 GSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVDKL 199
            +K   +N    +S         +   + MD    T++++ FWP  +   LNLP  +   
Sbjct: 484 LAKEHQTNFVEFLSVN-------KTKKLGMD-FTVTVLTTGFWPSYKTTDLNLPIEMVNC 535

Query: 200 LSDYAKRFNEIKTPRKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQD 253
           +  +   +      R+L W  SLGT +L  +   + ++  V    A++++ F +
Sbjct: 536 VEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNN 589


>AT5G46210.1 | Symbols: CUL4, ATCUL4 | cullin4 |
           chr5:18731569-18736653 REVERSE LENGTH=792
          Length = 792

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 10/201 (4%)

Query: 78  MIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLND 137
           ++   I  KD     Y+  LA++LL      ID+E   +  LK   G     K E M  D
Sbjct: 470 VLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKD 529

Query: 138 LIGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLPEPVD 197
           +  SK IN + K    Q SQ   ++  + I M   +  ++++ +WP      + LP  ++
Sbjct: 530 IELSKEINESFK----QSSQARTKL-PSGIEM---SVHVLTTGYWPTYPPMDVKLPHELN 581

Query: 198 KLLSDYAKRFNEIK-TPRKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQDQTS 256
            +  D  K F   K + R+L W+ SLG   L+        +  V+   A ++M F D   
Sbjct: 582 -VYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMK 640

Query: 257 WTSKNLAAAVGIPVDALNRRM 277
            + +++  +  I    L R +
Sbjct: 641 LSFEDIKDSTSIEDKELRRTL 661


>AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 |
           chr1:9296063-9298374 FORWARD LENGTH=732
          Length = 732

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 12/204 (5%)

Query: 73  VDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCE 132
           +D + M+   +  KD     Y+  LA++LL+      D+E   +  LK   G     K E
Sbjct: 403 LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462

Query: 133 IMLNDLIGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNL 192
            M  D+  S+        +  + S+              +   ++++  WP     P NL
Sbjct: 463 GMFTDMKTSEDTMRGFYGSHPELSEG-----------PTLIVQVLTTGSWPTQPAVPCNL 511

Query: 193 PEPVDKLLSDYAKRFNEIKTPRKLQWKKSLGTVKLELQL-KDRVLQFTVAPVHASIIMNF 251
           P  V  L   +   +    T R+L W+ ++GT  ++    K +  +  V+     ++M F
Sbjct: 512 PAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLMLF 571

Query: 252 QDQTSWTSKNLAAAVGIPVDALNR 275
            +    + K +  A  IP   L R
Sbjct: 572 NNSDRLSYKEIEQATEIPAADLKR 595


>AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B |
           chr1:26202169-26204442 REVERSE LENGTH=732
          Length = 732

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 73  VDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCE 132
           +D + M+   +  KD     Y+  LA++LL+      D+E   +  LK   G     K E
Sbjct: 403 LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462

Query: 133 IMLNDLIGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNL 192
            M  D+  S         T+     ++ E+ +       +   ++++  WP       NL
Sbjct: 463 GMFTDMKTSH-------DTLLGFYNSHPELSEGP----TLVVQVLTTGSWPTQPTIQCNL 511

Query: 193 PEPVDKLLSDYAKRFNEIKTPRKLQWKKSLGTVKLELQL-KDRVLQFTVAPVHASIIMNF 251
           P  V  L   +   +    T R+L W+ ++GT  ++    K +  +  V+     ++M F
Sbjct: 512 PAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLMLF 571

Query: 252 QDQTSWTSKNLAAAVGIPVDALNR 275
            +    + K +  A  IP   L R
Sbjct: 572 NNSDRLSYKEIEQATEIPTPDLKR 595


>AT1G43140.1 | Symbols:  | Cullin family protein |
           chr1:16232785-16236109 FORWARD LENGTH=721
          Length = 721

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/202 (19%), Positives = 89/202 (44%), Gaps = 16/202 (7%)

Query: 79  IVGIIGSKDQLVHEYRTMLAEKLLNK----SDYDIDSEI-RTLELLKIHFGESSLQKCEI 133
           I+   G  ++L  E   +  EK++N     SD D+ +E  R  +  ++ F  S + K   
Sbjct: 400 ILKTRGGSEKLSDEATEITLEKVVNLLVYISDKDLFAEFYRKKQARRLLFDRSGIMK--- 456

Query: 134 MLNDLIGSKRINSNIKATISQPSQTNVEVEDNAISMDNIAATIISSNFWPPIQVEPLNLP 193
            + D+  ++ + +N    +S    T + +        +   T++++ FWP  +   LNLP
Sbjct: 457 EVTDITLARELQTNFVDYLSANMTTKLGI--------DFTVTVLTTGFWPSYKTTDLNLP 508

Query: 194 EPVDKLLSDYAKRFNEIKTPRKLQWKKSLGTVKLELQLKDRVLQFTVAPVHASIIMNFQD 253
             +   +  +   +      R+L W  SLGT  +  + + + ++  V+   A++++ F +
Sbjct: 509 TEMVNCVEAFKVFYGTKTNSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNN 568

Query: 254 QTSWTSKNLAAAVGIPVDALNR 275
               +   ++  + +  + L R
Sbjct: 569 AERLSYTEISEQLNLSHEDLVR 590