Miyakogusa Predicted Gene
- Lj1g3v0662090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0662090.1 Non Chatacterized Hit- tr|I1JB37|I1JB37_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4802 PE=,69.5,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; PREDICTED:
HYPOTHETICAL PROTEIN,NULL;,CUFF.26128.1
(539 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 507 e-144
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 507 e-144
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 507 e-144
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 470 e-132
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-119
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 73 6e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 67 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 3e-11
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 63 5e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 7e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 3e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 4e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 58 1e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 57 3e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 55 9e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 54 3e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 53 6e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 51 3e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 9e-06
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 507 bits (1306), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/503 (50%), Positives = 354/503 (70%), Gaps = 16/503 (3%)
Query: 42 LESHPIRYGRFLSTSRFYHGGRASLNFTVSRRELSSQADASSTKEDDDIEDGLCEQEA-- 99
+S+ I + + RFY ++S R LSS A S +E+DD+EDG E E
Sbjct: 35 FDSNSIASTKREAVPRFYEIS------SLSNRALSSSAGTKSDQEEDDLEDGFSELEGSK 88
Query: 100 --HGDTNENESEVDLSDDDDGSGEPHNELSETEIDPTVKKQHRKTESQLFKAIISSPGVS 157
G T+ +E E LS D+ E +L ET++ +K K +S+LFK I+S+PG+S
Sbjct: 89 SGQGSTSSDEDEGKLSADE--EEEEELDLIETDVS---RKTVEKKQSELFKTIVSAPGLS 143
Query: 158 VQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVL 217
+ SAL+KWVE+G E+ R EI+ A + LR+R+MYGRALQ+ +WLE NKK+E E+DYAS L
Sbjct: 144 IGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRL 203
Query: 218 DLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPIT 277
DL K+ GL + E ++K+P+SF+GE+LYRTLLAN + N+KK+E FNKM+DL P++
Sbjct: 204 DLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLS 263
Query: 278 AFACNQLLLIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVET 337
F C+Q+LL++K++D+KKI+DVLLLMEKEN+KPS TYKILID KG +NDI+GMEQI+ET
Sbjct: 264 GFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILET 323
Query: 338 MKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGK 397
MK EG+E + Q QA AR+Y+ AGLK+KAE +L+E+EGE+L N LL +YA+LG+
Sbjct: 324 MKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGR 383
Query: 398 ADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXN-KWKLSSKNYSVLLK 456
DEV+RIWK+ ESKP + LAA++A+G+L K + SS YSVLL+
Sbjct: 384 EDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLR 443
Query: 457 VYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMT 516
VY +HKML KGKDL++RM E+GC+I TWD+L+KLY +AGEVEKAD++L K +QS
Sbjct: 444 VYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTK 503
Query: 517 PMFNTYMAVMEQYAKRGDVHNSE 539
M N++M +M++Y+KRGDVHN+E
Sbjct: 504 LMMNSFMYIMDEYSKRGDVHNTE 526
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 507 bits (1306), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/503 (50%), Positives = 354/503 (70%), Gaps = 16/503 (3%)
Query: 42 LESHPIRYGRFLSTSRFYHGGRASLNFTVSRRELSSQADASSTKEDDDIEDGLCEQEA-- 99
+S+ I + + RFY ++S R LSS A S +E+DD+EDG E E
Sbjct: 35 FDSNSIASTKREAVPRFYEIS------SLSNRALSSSAGTKSDQEEDDLEDGFSELEGSK 88
Query: 100 --HGDTNENESEVDLSDDDDGSGEPHNELSETEIDPTVKKQHRKTESQLFKAIISSPGVS 157
G T+ +E E LS D+ E +L ET++ +K K +S+LFK I+S+PG+S
Sbjct: 89 SGQGSTSSDEDEGKLSADE--EEEEELDLIETDVS---RKTVEKKQSELFKTIVSAPGLS 143
Query: 158 VQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVL 217
+ SAL+KWVE+G E+ R EI+ A + LR+R+MYGRALQ+ +WLE NKK+E E+DYAS L
Sbjct: 144 IGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRL 203
Query: 218 DLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPIT 277
DL K+ GL + E ++K+P+SF+GE+LYRTLLAN + N+KK+E FNKM+DL P++
Sbjct: 204 DLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLS 263
Query: 278 AFACNQLLLIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVET 337
F C+Q+LL++K++D+KKI+DVLLLMEKEN+KPS TYKILID KG +NDI+GMEQI+ET
Sbjct: 264 GFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILET 323
Query: 338 MKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGK 397
MK EG+E + Q QA AR+Y+ AGLK+KAE +L+E+EGE+L N LL +YA+LG+
Sbjct: 324 MKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGR 383
Query: 398 ADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXN-KWKLSSKNYSVLLK 456
DEV+RIWK+ ESKP + LAA++A+G+L K + SS YSVLL+
Sbjct: 384 EDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLR 443
Query: 457 VYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMT 516
VY +HKML KGKDL++RM E+GC+I TWD+L+KLY +AGEVEKAD++L K +QS
Sbjct: 444 VYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTK 503
Query: 517 PMFNTYMAVMEQYAKRGDVHNSE 539
M N++M +M++Y+KRGDVHN+E
Sbjct: 504 LMMNSFMYIMDEYSKRGDVHNTE 526
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 507 bits (1306), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/503 (50%), Positives = 354/503 (70%), Gaps = 16/503 (3%)
Query: 42 LESHPIRYGRFLSTSRFYHGGRASLNFTVSRRELSSQADASSTKEDDDIEDGLCEQEA-- 99
+S+ I + + RFY ++S R LSS A S +E+DD+EDG E E
Sbjct: 35 FDSNSIASTKREAVPRFYEIS------SLSNRALSSSAGTKSDQEEDDLEDGFSELEGSK 88
Query: 100 --HGDTNENESEVDLSDDDDGSGEPHNELSETEIDPTVKKQHRKTESQLFKAIISSPGVS 157
G T+ +E E LS D+ E +L ET++ +K K +S+LFK I+S+PG+S
Sbjct: 89 SGQGSTSSDEDEGKLSADE--EEEEELDLIETDVS---RKTVEKKQSELFKTIVSAPGLS 143
Query: 158 VQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVL 217
+ SAL+KWVE+G E+ R EI+ A + LR+R+MYGRALQ+ +WLE NKK+E E+DYAS L
Sbjct: 144 IGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRL 203
Query: 218 DLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPIT 277
DL K+ GL + E ++K+P+SF+GE+LYRTLLAN + N+KK+E FNKM+DL P++
Sbjct: 204 DLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLS 263
Query: 278 AFACNQLLLIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVET 337
F C+Q+LL++K++D+KKI+DVLLLMEKEN+KPS TYKILID KG +NDI+GMEQI+ET
Sbjct: 264 GFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILET 323
Query: 338 MKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGK 397
MK EG+E + Q QA AR+Y+ AGLK+KAE +L+E+EGE+L N LL +YA+LG+
Sbjct: 324 MKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGR 383
Query: 398 ADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXN-KWKLSSKNYSVLLK 456
DEV+RIWK+ ESKP + LAA++A+G+L K + SS YSVLL+
Sbjct: 384 EDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLR 443
Query: 457 VYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMT 516
VY +HKML KGKDL++RM E+GC+I TWD+L+KLY +AGEVEKAD++L K +QS
Sbjct: 444 VYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTK 503
Query: 517 PMFNTYMAVMEQYAKRGDVHNSE 539
M N++M +M++Y+KRGDVHN+E
Sbjct: 504 LMMNSFMYIMDEYSKRGDVHNTE 526
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/525 (47%), Positives = 362/525 (68%), Gaps = 15/525 (2%)
Query: 16 LNVGAYRASCAKLTSPTTYVEDEAGILESHPIRYGRFLSTSRFYHGGRASLNFTVSRREL 75
L +GA A +KL P + + +ES+ + + + + RFY S + + RR L
Sbjct: 14 LRLGACNAVYSKLDIP---LGERNIAIESNALIHDKHEALPRFYE---LSWSSSTGRRSL 67
Query: 76 SSQADASSTKEDDDIEDGLCEQEAHGDTNENESEVDLSDDDDGSGEPHNELSETEIDPTV 135
SS A A +T +DDD+ED + +E+ D D ++ SG+ ++ E++ V
Sbjct: 68 SSDAGAKTTGDDDDLEDKNVDL-----ATPDETSSDSEDGEEFSGD-EGDIEGAELELHV 121
Query: 136 KKQHRKTESQLFKAIISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQ 195
+ R +E +FKAI+S G+SV SAL+KWVE+GK+ NR E A + LRKR+M+GRALQ
Sbjct: 122 PESKRPSE--MFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQ 179
Query: 196 LLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYAS 255
+ +WL++NK+ E E+DYA LDLI+KV G ++ E YIK +PESFRGEL+YRTLLAN+ +
Sbjct: 180 MTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVA 239
Query: 256 QNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEKENVKPSHFTY 315
+N++ E FNKM+DL P++ F CNQ+L++YK+VDKKKI+DVLLL+EKEN+KP+ TY
Sbjct: 240 TSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTY 299
Query: 316 KILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEG 375
KILIDTKG SNDI GMEQIVETMK+EG+E + + +A +AR+Y SAGLKEKAE +L+E+EG
Sbjct: 300 KILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEG 359
Query: 376 ENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXX 435
E+L +N +C LL +Y L + DEV R+WK+ E P + LAA+ A+G++ K
Sbjct: 360 ESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEA 419
Query: 436 XXXXXXN-KWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYT 494
++SS YSVLL+VY +HKM+ +GKDL+++M ++GC IG LTWD+++KLY
Sbjct: 420 VFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYV 479
Query: 495 QAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNSE 539
+AGEVEKA++ L K ++ ++ P+ +++M +M +Y +RGDVHN+E
Sbjct: 480 EAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTE 524
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/435 (48%), Positives = 305/435 (70%), Gaps = 14/435 (3%)
Query: 115 DDDGSGEPHNELSETEIDPTVKKQH---------RKTESQLFKAIISSPGVSVQSALEKW 165
DDD EP EL D ++++H ++ +S+L+++I++ SV+ LEKW
Sbjct: 109 DDDSLFEP--ELGSDNDDLEIEEKHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKW 164
Query: 166 VEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSG 225
V++GK+L++ E++LA NLRKRK Y LQL +WL N + EF E +YAS LDL+AKV
Sbjct: 165 VKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHS 224
Query: 226 LFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLL 285
L +AE ++K +PES RGE++YRTLLAN ++++ K E+ FNKM++L P + FACNQLL
Sbjct: 225 LQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLL 284
Query: 286 LIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEP 345
L+Y D+KKISDVLLLME+EN+KPS TY LI++KG + DI GME+IVET+K EGIE
Sbjct: 285 LLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIEL 344
Query: 346 NHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIW 405
+ ++Q+ LA+YY AGLKE+A+ +++EIEG+ L+ WVC +LL LYA++G +D V R+
Sbjct: 345 DPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLS 404
Query: 406 KVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKL-SSKNYSVLLKVYANHKML 464
+ V+ P D C++A++AWG+L++ K+K+ Y L+++Y +KML
Sbjct: 405 RFVDQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKML 464
Query: 465 KKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMA 524
KG+DL++RMG G IGP TW +LVKLY +AGEV KA+ +L + + ++M PMF TYMA
Sbjct: 465 AKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKMRPMFTTYMA 524
Query: 525 VMEQYAKRGDVHNSE 539
++E+YAKRGDVHN+E
Sbjct: 525 ILEEYAKRGDVHNTE 539
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 209/425 (49%), Gaps = 22/425 (5%)
Query: 132 DPTVKKQHRKTESQLFKAIISSPG--VSVQSALEKWVEKGKELNRPEISLAFVNLRKRKM 189
D T + + E L+ + G V V+ L ++++ K + + E+ LR R +
Sbjct: 11 DVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGL 70
Query: 190 YGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTL 249
Y AL+L + +E+ + + D A LDL+AK + ENY +PE+ + EL Y +L
Sbjct: 71 YYPALKLSEVMEE-RGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSL 129
Query: 250 LANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLLMEKENV 308
L Y + +K E NKM++L++ ++ + N L+ +Y K + +K+ ++ ++ ENV
Sbjct: 130 LNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENV 189
Query: 309 KPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEG-IEPNHQVQAALARYYTSAGLKEKAE 367
P +TY + + +NDI+G+E+++E M +G + P+ + +A Y AGL +KAE
Sbjct: 190 MPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAE 249
Query: 368 AILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVE---SKPGIDVCLAAVEAW 424
LQE+E +N + + L+ LY LGK EV RIW+ + K L ++
Sbjct: 250 KALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVL 309
Query: 425 GRLQKXXXXXXXXXXXXNKWKLSSKNY-----SVLLKVYANHKMLKKGKDLIQRMGENGC 479
+L +W+ + Y +VL+ YA +++K +L ++ G
Sbjct: 310 VKLND----LPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGG 365
Query: 480 KIGPLTWDSLVKLYTQAGEVEKADAVLQKVM-----EQSRMTPMFNTYMAVMEQYAKRGD 534
K+ TW+ + Y ++G++ +A + K + + + P T A+M + ++ D
Sbjct: 366 KLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKD 425
Query: 535 VHNSE 539
V+ +E
Sbjct: 426 VNGAE 430
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 186/395 (47%), Gaps = 10/395 (2%)
Query: 155 GVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYA 214
GV+V SAL+ W+ G ++ ++ A LRK RAL+L++W+ + + E +Y+
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137
Query: 215 SVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDLDL 274
+L+ K+ G+ + E +VP+ F+ ELLY L+ Q ++ E KMR+L
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 197
Query: 275 PITAFACNQLLLIYKKVDKKK-ISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQ 333
+ N+L++ ++K I+ L LM+ + P TY IL+ + ++I G+ +
Sbjct: 198 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 257
Query: 334 IVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYA 393
+ MK G+EPN LA + A L AEA +EIE DN L+ LY
Sbjct: 258 AFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYG 317
Query: 394 NLGKADEVERIWKVVESKPGI--DVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLS-SKN 450
LGK E+ R W V+ + L A EA+ R+ N L ++
Sbjct: 318 RLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ 377
Query: 451 YSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSL------VKLYTQAGEVEKADA 504
++ LL VY +++K + + M NG K +T+ L KL +A + +
Sbjct: 378 FNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGL 437
Query: 505 VLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNSE 539
L+ TP T ++++E +A++GDV NSE
Sbjct: 438 NLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSE 472
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 186/389 (47%), Gaps = 26/389 (6%)
Query: 139 HRKTESQLFKAI--ISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQL 196
+R ++ L+ I + P SV L+ WV+ GK+++ E+ +LR+RK + AL++
Sbjct: 20 NRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEV 79
Query: 197 LQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQ 256
+W+ + F+ ++A LDLI +V G AE Y + + E ++ + Y LL Y Q
Sbjct: 80 SKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQ 139
Query: 257 NNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLMEKENVKPSHFTY 315
N++K+ F KM+++ ++ N ++ +Y + + +K+ VL M++ENV P +++Y
Sbjct: 140 QNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSY 199
Query: 316 KILIDTKGQSNDIAGMEQIVETM-KAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIE 374
+I I+ G D+ + + M + + I + A A++Y G ++A +L+ E
Sbjct: 200 RICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSE 259
Query: 375 GENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVC--------LAAVEAWGR 426
+ + L+ LYA LGK EV R+W + + DVC L +++ +
Sbjct: 260 NRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEK-----DVCKRRINQDYLTVLQSLVK 314
Query: 427 LQKXXXXXXXXXXXXNKWKLSSKNY-----SVLLKVYANHKMLKKGKDLIQRMGENGCKI 481
+ +WK S Y + +++ Y M +K + +++ + G
Sbjct: 315 ID----ALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKAT 370
Query: 482 GPLTWDSLVKLYTQAGEVEKADAVLQKVM 510
P +W+ + Y + G +E A ++ +
Sbjct: 371 TPESWELVATAYAEKGTLENAFKCMKTAL 399
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 23/410 (5%)
Query: 127 SETEIDPTVKKQHRKTESQLFKAIISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRK 186
+ + +DP Q R S P S+ L+ W+++G + E+ LRK
Sbjct: 30 TPSPLDPYDTLQRRVARS-------GDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRK 82
Query: 187 RKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLY 246
+ ALQ+ W+ +++ E +E D A LDLIAKV GL AE + + +P R LY
Sbjct: 83 FSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLY 142
Query: 247 RTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL-MEK 305
LL YAS+ L K E+ F +M++L N +L +Y + K + + LL ME
Sbjct: 143 GALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMED 202
Query: 306 ENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKA-EGIEPNHQVQAALARYYTSAGLKE 364
E VKP FT + +D+ GME+ + +A +G+ + + A A Y AGL E
Sbjct: 203 ETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTE 262
Query: 365 KAEAILQEIEGE-NLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGI--DVCLAAV 421
KA +L++ E N + L+ Y GK +EV R+W + + G ++ +
Sbjct: 263 KALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVI 322
Query: 422 EAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSV-----LLKVYANHKMLKKGKDLIQRMGE 476
A ++ +W+ + + L+ Y M++K ++++ + +
Sbjct: 323 SALLKMDD----IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQ 378
Query: 477 NGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVM 526
TW+ L Y AG++EKA ++ +E S+ P + + V+
Sbjct: 379 KWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSK--PGWRPHQVVL 426
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 171/368 (46%), Gaps = 11/368 (2%)
Query: 149 AIISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLE-KNKKLE 207
+++ P + S L +W + G++L + E+ LRK K +AL++ W+ + ++
Sbjct: 74 SLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFR 133
Query: 208 FAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFN 267
+ D A LDLI KV G+ AE + ++PE+F+ +Y +LL Y + +K E N
Sbjct: 134 LSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLN 193
Query: 268 KMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSN 326
MRD + N ++ +Y + + K+ ++ M++++++ ++Y I + + G
Sbjct: 194 TMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLG 253
Query: 327 DIAGMEQIVETMKAE-GIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVC 385
+ ME + + MK++ I PN + +A Y G EKAE L+++E N
Sbjct: 254 SVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPY 313
Query: 386 PTLLRLYANLGKADEVERIW----KVVESKP--GIDVCLAAVEAWGRLQKXXXXXXXXXX 439
LL LY +LG E+ R+W VV S P G ++++ G ++
Sbjct: 314 HYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLP 373
Query: 440 XXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEV 499
+ + N +L+ Y + L+ + L M E G K TW+ L +T+ +
Sbjct: 374 VKSSYDPRIPN--LLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCI 431
Query: 500 EKADAVLQ 507
+A L+
Sbjct: 432 SEALTCLR 439
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 181/394 (45%), Gaps = 15/394 (3%)
Query: 152 SSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEK 211
+ P SV S L++ ++ G ++ E+ L L + Y ALQ+++W+E K +EF+
Sbjct: 48 NGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVY 107
Query: 212 DYASVLDLIAKVSGLFRAENYIKKVPESFRGELL----YRTLLANYASQNNLKKTEETFN 267
D A LDLI K GL + E Y +K+ S + Y LL Y +K+ E
Sbjct: 108 DIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALME 167
Query: 268 KMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLMEKENVKPSHFTYKILIDTKGQSN 326
K+ L +T N+++ +Y+ + +K+ V+ +M+ + + +Y + ++ + +
Sbjct: 168 KLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVS 227
Query: 327 DIAGMEQIVETMKAE-GIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVC 385
+A +E + + M + +E LA Y +G EKA +L++ E R N
Sbjct: 228 GVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGY 287
Query: 386 PTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWK 445
L+ LYA+LG + V R+W+V +S G C+ + L K ++W+
Sbjct: 288 FFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVK-TGDLEEAERVFSEWE 346
Query: 446 LSSKNY-----SVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVE 500
NY +VLL Y + ++K + L + E G TW+ L++ + + +E
Sbjct: 347 AQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENME 406
Query: 501 KADAVLQKV---MEQSRMTPMFNTYMAVMEQYAK 531
KA + +V M + P N MA+ E + K
Sbjct: 407 KAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEK 440
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 153/287 (53%), Gaps = 7/287 (2%)
Query: 133 PTVKKQHRKTESQLFKAIISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGR 192
PT K+HR +L ++ + G ++ L ++V +G + + ++ +LRK + R
Sbjct: 32 PTKAKKHRSIYKKL-SSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQR 90
Query: 193 ALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLAN 252
AL++ +W+E+ K++ F D+A L+LIAK GL AE Y + +S + + Y +LL
Sbjct: 91 ALEIFEWMER-KEIAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNC 149
Query: 253 YASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLMEKENVKPS 311
Y + K + F M DL+ + N L+ +Y + + +K+ +++ M+++++ P
Sbjct: 150 YCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPC 209
Query: 312 HFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEP-NHQVQAALARYYTSAGLKEKAEAIL 370
TY + I + G D+ G+E++++ MKAEG + A LA Y GL KAE L
Sbjct: 210 DITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEAL 269
Query: 371 QEIEGENLRDNLWVC-PTLLRLYANLGKADEVERIWKVVESK-PGID 415
+ +E N+ ++ C L+ LY + A EV R+W +++ + P ++
Sbjct: 270 KSLEN-NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVN 315
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 155/304 (50%), Gaps = 12/304 (3%)
Query: 133 PTVKKQHRKTESQLFKAIISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGR 192
PTV + R+ +L +++S G +V L +++ +G + + ++ LRK +
Sbjct: 64 PTVASRQRELYKKL--SMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQH 121
Query: 193 ALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKV-PESFRGELLYRTLLA 251
A ++ W+EK +K+ F+ D+A LDLI K GL AENY + P + + Y L+
Sbjct: 122 AFEIFDWMEK-RKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMN 180
Query: 252 NYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLL-LMEKENVKP 310
Y + +K + F M +L+ + N ++ +Y ++ + + VL+ M++ + P
Sbjct: 181 CYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISP 240
Query: 311 SHFTYKILIDTKGQSNDIAGMEQIVETM-KAEGIEPNHQVQAALARYYTSAGLKEKAEAI 369
TY I + + G ND+ G+E+I++ M K + + LA YT AGL EKA++
Sbjct: 241 CGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSA 300
Query: 370 LQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVV-ESKPGID-----VCLAAVEA 423
L+ +E + +N L+ LYA + K EV R+W+ + +++P ++ V L A+
Sbjct: 301 LKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSK 360
Query: 424 WGRL 427
G L
Sbjct: 361 LGDL 364
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 22/359 (6%)
Query: 157 SVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASV 216
S + KW E+G + + E++ LRK K Y AL++ +W+ + ++ DYA
Sbjct: 76 SAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVH 135
Query: 217 LDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPI 276
LDLI+K+ GL AE + + +P+ RG +LL +Y K E F KM +
Sbjct: 136 LDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLK 195
Query: 277 TAFACNQLLLIYKKVDKKKISDVLLLMEKENVK--PSHFTYKILIDTKGQSNDIAGMEQI 334
+ N +L +Y + + + V +L+++ ++ P TY + + ND+ G E++
Sbjct: 196 SCLPYNHMLSMY--ISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKV 253
Query: 335 VETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYAN 394
K E + P+ + L Y EKA L+E+E + N +L+ L+AN
Sbjct: 254 YLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHAN 313
Query: 395 LGKADEVERIWKVVES--KPGIDV----CLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSS 448
LG D V WK V+S K D ++AV G ++ ++W+ S
Sbjct: 314 LGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQ-------AKGLYDEWESVS 366
Query: 449 -----KNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKA 502
+ +++L Y N + G+ +R+ E G TW+ L Y + ++EK
Sbjct: 367 GTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKV 425
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 135/260 (51%), Gaps = 10/260 (3%)
Query: 161 ALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLI 220
LE+W ++G ++N + + LR +ALQ+ +W+ K K +D+A+ L LI
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLI 114
Query: 221 AKVSGLFRAENYIKKVPESFRGELLYRTLLANYA-SQNNLKKTEETFNKMRDLDLPITAF 279
V GL AE + + +P++ RG+ +Y +LL +YA S L K E TF KMRDL L +
Sbjct: 115 ENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPV 174
Query: 280 ACNQLLLIYKKV-DKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETM 338
N ++ +Y + +++K+ ++LL M+ +V+ + T ++ D+ ME+ +
Sbjct: 175 PYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKW 234
Query: 339 KA-EGIEPNHQVQAALARYYTSAGLKEKAEAIL----QEIEGENLRDNLWVCPTLLRLYA 393
+ GI+ +A+ Y A KA +L Q ++ ++L+ L++LY
Sbjct: 235 EGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKS---AYDHLMKLYG 291
Query: 394 NLGKADEVERIWKVVESKPG 413
G +EV R+WK+ +SK G
Sbjct: 292 EAGNREEVLRVWKLYKSKIG 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 158 VQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVL 217
V LE+W G ++ ++ NLR K + +ALQ+ +W+ + + +DYA+ L
Sbjct: 387 VTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARL 443
Query: 218 DLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYA-SQNNL-KKTEETFNKMRDLDLP 275
L V GL AE Y + +PE+ + +Y LL++YA S NL +E +M + ++
Sbjct: 444 YLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNVD 503
Query: 276 ITAFACNQLLLIY 288
N +L +Y
Sbjct: 504 PDLITVNHVLKVY 516
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 14/318 (4%)
Query: 207 EFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETF 266
E +E D A LDLIAKV GL AE + + +P R LY LL YAS+ L K E+ F
Sbjct: 8 EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVF 67
Query: 267 NKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL-MEKENVKPSHFTYKILIDTKGQS 325
+M++L N +L +Y + K + + LL ME E VKP FT +
Sbjct: 68 QEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVV 127
Query: 326 NDIAGMEQIVETMKA-EGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGE-NLRDNLW 383
+D+ GME+ + +A +G+ + + A A Y AGL EKA +L++ E N +
Sbjct: 128 SDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 187
Query: 384 VCPTLLRLYANLGKADEVERIWKVVESKPGI--DVCLAAVEAWGRLQKXXXXXXXXXXXX 441
L+ Y GK +EV R+W + + G ++ + A ++
Sbjct: 188 AYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDD----IEEVEKIM 243
Query: 442 NKWKLSSKNYSV-----LLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQA 496
+W+ + + L+ Y M++K ++++ + + TW+ L Y A
Sbjct: 244 EEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMA 303
Query: 497 GEVEKADAVLQKVMEQSR 514
G++EKA ++ +E S+
Sbjct: 304 GKMEKAVEKWKRAIEVSK 321
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 140/267 (52%), Gaps = 6/267 (2%)
Query: 144 SQLFKAIISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKN 203
S++F+ + P S + LEKW+ +G ++ E+ LR+ + Y AL++ +W+ ++
Sbjct: 59 SRIFR--LRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 116
Query: 204 KKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTE 263
++ + ++ DYAS +DLI+KV G+ AE Y + + + Y +LL YA+ ++ E
Sbjct: 117 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 176
Query: 264 ETFNKMRDLD-LPITAFACNQLLLIYKKVDK-KKISDVLLLMEKENVKPSHFTYKILIDT 321
F ++ + D L A N+++ +Y V + +K+ +V+ +++++ V P FTY + + +
Sbjct: 177 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 236
Query: 322 KGQSNDIAGMEQIVETMKAEGIEPNHQVQAA-LARYYTSAGLKEKAEAILQEIEGENLRD 380
+ +I + +I+E M+ + V+ L Y ++ AE+ L +++
Sbjct: 237 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 296
Query: 381 NLWVC-PTLLRLYANLGKADEVERIWK 406
W+ L+ L+ LG +++IWK
Sbjct: 297 REWITYDFLMILHTGLGNKVMIDQIWK 323
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 169/403 (41%), Gaps = 34/403 (8%)
Query: 158 VQSALEKWVEKG-KELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYAS- 215
VQS ++ + KG K +N +L V + G + L WL K K+ + +
Sbjct: 206 VQSLWDEMIRKGIKPINSTYGTLIDVYSKG----GLKVHALCWLGKMSKIGMQPDEVTTG 261
Query: 216 -VLDLIAKVSGLFRAENYIKKVP--------ESFRGELLYRTLLANYASQNNLKKTEETF 266
VL + K +AE + KK Y T++ Y +K+ ETF
Sbjct: 262 IVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETF 321
Query: 267 NKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLME--KENVKPSHFTYKILIDTKGQ 324
+M + + T N ++ IY + ++ +V LM+ K + P TY ILI +
Sbjct: 322 KRMLEEGIVPTTVTFNTMIHIYG--NNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTK 379
Query: 325 SNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWV 384
+NDI + MK +G++P+ L ++ + E+AE ++ E++ +N+ + +
Sbjct: 380 NNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYT 439
Query: 385 CPTLLRLYANLGKADEVERIWKVVE--------SKPGIDVCLAAVEAWGRLQKXXXXXXX 436
L R+Y +A+ +E+ W + S G A ++A+G
Sbjct: 440 QSALTRMYV---EAEMLEKSWSWFKRFHVAGNMSSEGYS---ANIDAYGERGYLSEAERV 493
Query: 437 XXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQA 496
K + Y+V++K Y K +K +L + M G T+++LV++ A
Sbjct: 494 FICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASA 553
Query: 497 GEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNSE 539
K L+K+ E ++ Y AV+ + K G ++ +E
Sbjct: 554 DMPHKGRCYLEKMRETGYVSDCI-PYCAVISSFVKLGQLNMAE 595
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 158 VQSALEKWVEKGKELNRPEISLAFVN-LRKRKMYGRALQLLQWLEKNKKLEFAEKDYASV 216
V L++W+++GK+LN P + +N L + + + ALQ+ +W+ K + + +D+AS
Sbjct: 49 VTPPLDEWLKRGKDLN-PAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFASR 107
Query: 217 LDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYA-SQNNLKKTEETFNKMRDLDLP 275
L L+ +GL AE + K +PE+ R + ++ TLL+ Y S+ + E T+ MR ++
Sbjct: 108 LCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNML 167
Query: 276 ITAFACNQLLLIYKKVDKKKISDVLLLMEKENV--KPSHFTYKILIDTKGQSNDIAGMEQ 333
+ + ++ +Y + +K + D +L KEN + T ++ D+ ME
Sbjct: 168 LKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEM 227
Query: 334 IVETMKAEGIEPNH----QVQAALARYYTSAGLKEKAEAILQEIE 374
+ ++ E EP Q ++A+ Y G KA +L+ E
Sbjct: 228 FLMGLEVE--EPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTE 270
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 8/212 (3%)
Query: 157 SVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASV 216
S+ LE+W ++G E+N + NL K + AL+ +W+ K+ + +D A+
Sbjct: 51 SIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCAAQ 110
Query: 217 LDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQ-NNLKKTEETFNKMRDLDLP 275
L L+ V GL AE K +PE R Y LL++Y + K E TF KMR+L
Sbjct: 111 LHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTKPVRTVDKAEATFKKMRELGFL 167
Query: 276 ITAFACNQLLLIYKKVDKKKISDVLLL-MEKENVKPSHFTYKILIDTKGQSNDIAGMEQI 334
+ + N ++ +Y ++ + + + LL ++K N++ + K+ ++ +N I ME+
Sbjct: 168 LKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVG--SLKVNNVSRVYAN-INAMEKF 224
Query: 335 VETMKAEGIEPNHQVQAALARYYTSAGLKEKA 366
+ EGIE A+A+ Y AG EKA
Sbjct: 225 KTWVSKEGIELERDTIVAMAKAYHRAGSIEKA 256
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 162 LEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIA 221
LE+ +KG +++ P + NLR +AL+ W+ + K +DYA+ L L
Sbjct: 366 LEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTE 425
Query: 222 KVSGLFRAENYIK-KVPESFRGELLYRTLLANYA-SQNNLKKTEETFNKMRDLDLPITAF 279
KV GL AEN+ + +PE+ + +Y TLL+ YA S N K E F KMR+L L
Sbjct: 426 KVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLS 485
Query: 280 ACNQLLLIYKKVDKKKISDVLLL-MEKENVKPSHFTYKILIDTKGQSNDIAGMEQI 334
N L+ +Y K + ++LL M+ +N++P T ++ I ME++
Sbjct: 486 PFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEKV 541
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 58/254 (22%)
Query: 160 SALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDL 219
S L VEK + NRP +AL++ W+ + K E D+++ L
Sbjct: 76 SLLRGIVEKLRSSNRPR---------------QALEVSDWMVEQKMYNLPE-DFSARFHL 119
Query: 220 IAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNN---LKKTEETFNKMRDLDLPI 276
KV L AE + + +PE+ R E +Y +LL +YA Q+ LKK E F KM+ L L +
Sbjct: 120 TEKVLNLEEAEKFFESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLL 179
Query: 277 TAFACNQLLLIYKKV-DKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIV 335
N + +Y + ++ K+ ++L M++ NV+ + T + +D+A M++ +
Sbjct: 180 RPSPYNSMTSLYSSLGNRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL 239
Query: 336 ----ETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRL 391
E + +G+ A+A+ Y L+ L
Sbjct: 240 ADRKEITRLDGL-----TMLAMAKAY-----------------------------ELMSL 265
Query: 392 YANLGKADEVERIW 405
Y G+ ++V R+W
Sbjct: 266 YGEAGEIEDVHRVW 279
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKK-KISDVLLLME 304
Y L+ +A + +K EE F ++++ L + N L+ Y + +++ LM+
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+P +Y I++D G++ + E + E MK GI P + L Y+ A
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAW 424
K EAI++E+ + + +V ++L LY LG+ ++E+I +E+ P C A +
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP----CTADIS-- 475
Query: 425 GRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPL 484
Y++L+ +Y L++ ++L + E + +
Sbjct: 476 -------------------------TYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 510
Query: 485 TWDSLVKLYTQAGEVEKADAVLQKVME 511
TW S + Y++ K V +++++
Sbjct: 511 TWTSRIGAYSRKKLYVKCLEVFEEMID 537
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 119/252 (47%), Gaps = 5/252 (1%)
Query: 286 LIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEP 345
L+ +K + ++ DV M+++ KP+ TY ++I+ G+++ ++ M++ +P
Sbjct: 238 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 346 NHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLG---KADEVE 402
N AL + GL EKAE I ++++ + L +++V L+ Y+ G A E+
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 403 RIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXN-KWKLSSKNYSVLLKVYANH 461
+ + + +P V+A+GR + K++ +LL Y+
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 462 KMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNT 521
+ + K + +++ M ENG + +S++ LY + G+ K + +L + ME T +T
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE-MENGPCTADIST 476
Query: 522 YMAVMEQYAKRG 533
Y ++ Y K G
Sbjct: 477 YNILINIYGKAG 488
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKK-KISDVLLLME 304
Y L+ +A + +K EE F ++++ L + N L+ Y + +++ LM+
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+P +Y I++D G++ + E + E MK GI P + L Y+ A
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAW 424
K EAI++E+ + + +V ++L LY LG+ ++E+I +E+ P C A +
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP----CTADIS-- 497
Query: 425 GRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPL 484
Y++L+ +Y L++ ++L + E + +
Sbjct: 498 -------------------------TYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 532
Query: 485 TWDSLVKLYTQAGEVEKADAVLQKVME 511
TW S + Y++ K V +++++
Sbjct: 533 TWTSRIGAYSRKKLYVKCLEVFEEMID 559
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 119/252 (47%), Gaps = 5/252 (1%)
Query: 286 LIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEP 345
L+ +K + ++ DV M+++ KP+ TY ++I+ G+++ ++ M++ +P
Sbjct: 260 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 319
Query: 346 NHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLG---KADEVE 402
N AL + GL EKAE I ++++ + L +++V L+ Y+ G A E+
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 403 RIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXN-KWKLSSKNYSVLLKVYANH 461
+ + + +P V+A+GR + K++ +LL Y+
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 462 KMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNT 521
+ + K + +++ M ENG + +S++ LY + G+ K + +L + ME T +T
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE-MENGPCTADIST 498
Query: 522 YMAVMEQYAKRG 533
Y ++ Y K G
Sbjct: 499 YNILINIYGKAG 510
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAG-MEQIVETMKAEGIEPNHQVQAALARYYTSAG 361
M+K NV P + T ILI T ++ A + +I E M +G++ + V L + + G
Sbjct: 299 MDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG 358
Query: 362 LKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVES---KPGIDVCL 418
LKE+A I E+E + +R N V TL+ Y +EVE ++ + KP
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 419 AAVEAWG-RLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYA-NHKMLKKGKDLIQRMGE 476
++A+ R+Q + + K+Y+ L+ Y KM D RM +
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 477 NGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDV 535
G K ++ +L+ Y+ +G EKA A +++ ++ + P TY +V++ + + GD
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG-IKPSVETYTSVLDAFRRSGDT 536
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 244 LLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL- 302
++Y TL+ Y N++++ E F +MRD L +A N L+ Y + + I + LL
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGME-QIVETMKAEGIEPNHQVQAALARYYTSAG 361
ME ++P+ +Y LI G++ ++ M MK G++P+ AL Y+ +G
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 362 LKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAV 421
EKA A +E+ E ++ ++ ++L + G ++ IWK++
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM------------- 546
Query: 422 EAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKI 481
K K + Y+ LL +A + + +D++ + G +
Sbjct: 547 ------------------LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 482 GPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGD 534
+T++ L+ Y + G+ K +L K M + P TY ++ + + D
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLL-KEMAALNLKPDSITYSTMIYAFVRVRD 640
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL--- 302
+ L+ N + +T + MRD + N L+ +V ++ D L L
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV--HRLDDALELFGN 423
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYT--SA 360
ME VKP+ +TY + ID G+S D + E MK +GI PN + A A Y+ A
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN--IVACNASLYSLAKA 481
Query: 361 GLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADE-VERIWKVVES--KPGIDVC 417
G +A+ I ++ L + +++ Y+ +G+ DE ++ + +++E+ +P + V
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 418 LAAV----------EAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKG 467
+ + EAW + K K + Y+ LL + +++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEM---------KLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 468 KDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVME 527
+L + M + GC +T+++L + EV A +L K+M+ + +F TY ++
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF-TYNTIIF 651
Query: 528 QYAKRGDV 535
K G V
Sbjct: 652 GLVKNGQV 659
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 99/240 (41%), Gaps = 5/240 (2%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
MEK+ P T+ IL+D ++ + ++ M+ +GI PN L
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 363 KEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK---PGIDVCLA 419
+ A + +E ++ + + Y G + ++ +++K P I C A
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 420 AVEAWGRLQKXXXXXXXXXXXXNKWKL-SSKNYSVLLKVYANHKMLKKGKDLIQRMGENG 478
++ + + + + + S Y++++K Y+ + + L+ M ENG
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 479 CKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNS 538
C+ + +SL+ +A V++A + + M++ ++ P TY ++ K G + +
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMR-MKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 248 TLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLLMEKE 306
T++ Y + +++ F +M++L + F N L+ + + D + +V+ LME+
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 307 NVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKA 366
VKP T+ L++ D+ E+I M GI+P+ + LA+ Y AG EKA
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKA 655
Query: 367 EAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEA--W 424
E IL ++ +R N+ + ++ + + G+ + +++K + G+ L E W
Sbjct: 656 EQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIW 715
Query: 425 G 425
G
Sbjct: 716 G 716
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 158/377 (41%), Gaps = 18/377 (4%)
Query: 159 QSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLD 218
S +E+G + + + L ++K + L L+ +EKN L+ + ++++
Sbjct: 339 HSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG-LKPDTILFNAIIN 397
Query: 219 LIAKVSGLFRAENYIKKVPESFRGEL--LYRTLLANYASQNNLKKTEETFNKM-RDLDLP 275
++ L +A +K+ ES + TL+ Y L+++ + M RD L
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 276 ITAFACNQLLLIYKKVDKKKIS---DVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGME 332
CN +L+ +++KI +++ M+ VKP T+ L + E
Sbjct: 458 PNDRTCN--ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 333 -QIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRL 391
I+ M ++PN + + Y G E+A ++ + NL+V +L++
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 392 YANLGKADEVERIWKVVES---KPGIDVCLAAVEAW---GRLQKXXXXXXXXXXXXNKWK 445
+ N+ D V + ++E KP + + AW G +++
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 446 LSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAV 505
+ + +S+L K YA +K + ++ +M + G + + + ++ + AGE++KA V
Sbjct: 636 IHA--FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Query: 506 LQKVMEQSRMTPMFNTY 522
+K+ ++P TY
Sbjct: 694 YKKMCGIVGLSPNLTTY 710
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 151/383 (39%), Gaps = 72/383 (18%)
Query: 158 VQSALEKWVEKGKELNRPEIS----LAFV-NLRKRKMYGRALQLLQWLEKNKKLEFAEKD 212
+ S L + E K+ +PE + LAF+ L K + AL+ W K +KD
Sbjct: 116 LDSVLSELFEPFKD--KPESTSSELLAFLKGLGFHKKFDLALRAFDWFMK-------QKD 166
Query: 213 YASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDL 272
Y S+LD N + + S G+ + + FN +++
Sbjct: 167 YQSMLD------------NSVVAIIISMLGK------------EGRVSSAANMFNGLQED 202
Query: 273 DLPITAFACNQLLLIYKKVDK-KKISDVLLLMEKENVKPSHFTYKILIDTKGQ-SNDIAG 330
+ ++ L+ + + ++ +V ME++ KP+ TY ++++ G+
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 331 MEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLR 390
+ +VE MK++GI P+ L L ++A + +E++ + LL
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 391 LYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKN 450
+Y GK+ + KV+ N + S
Sbjct: 323 VY---GKSHRPKEAMKVLNE----------------------------MVLNGFSPSIVT 351
Query: 451 YSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVM 510
Y+ L+ YA ML + +L +M E G K T+ +L+ + +AG+VE A ++ ++ M
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE-M 410
Query: 511 EQSRMTPMFNTYMAVMEQYAKRG 533
+ P T+ A ++ Y RG
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRG 433
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 37/297 (12%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLME 304
Y TL+ + ++ + F +M+ N LL +Y K + K+ VL M
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
PS TY LI + + ++ M +G +P+ L + AG E
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAA--VE 422
A +I +E+ + N+ +++Y N GK E+ +I+ I+VC + +
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD------EINVCGLSPDIV 455
Query: 423 AWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIG 482
W + LL V+ + M + + + M G
Sbjct: 456 TW---------------------------NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 483 PLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNSE 539
T+++L+ Y++ G E+A V +++++ +TP +TY V+ A+ G SE
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALARGGMWEQSE 544
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 13/276 (4%)
Query: 243 ELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL 302
++ Y LL Y + K+ + N+M + N L+ Y + + + + L
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR--DGMLDEAMEL 371
Query: 303 ---MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTS 359
M ++ KP FTY L+ ++ + I E M+ G +PN A + Y +
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 360 AGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWK------VVESKPG 413
G + I EI L ++ TLL ++ G EV ++K V +
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 414 IDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQR 473
+ ++A G ++ LS+ Y+ +L A M ++ + ++
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST--YNTVLAALARGGMWEQSEKVLAE 549
Query: 474 MGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKV 509
M + CK LT+ SL+ Y E+ ++ ++V
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 114/240 (47%), Gaps = 18/240 (7%)
Query: 307 NVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKA 366
+ KP FT+ +LI + ++ IV M G+ + + Y AG+ E+
Sbjct: 210 DCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEM 269
Query: 367 EAILQEI--EGENLRDNLWVCPTLLRLYANLGKADEVERI------WKVVESKPGIDVCL 418
E++L ++ +G++L D VC TL + + G + ++ ++++ +P I
Sbjct: 270 ESVLADMIEDGDSLPD---VC-TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 419 AAVEAWGRLQKXXXXXXXXXXXXNKW-KLSSKNYSVLLKVYANHKMLKKGKDLIQRMGEN 477
+ ++G+ ++ L++ Y+++++ + ++K D+ ++M
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 385
Query: 478 GCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRM--TPMFNTYMAVMEQYAKRGDV 535
G K +T+ SLV Y++AG V K D+VL++++ + TP FN ++ Y + GD+
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFN---CIINAYGQAGDL 442
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 248 TLLANYASQNNLKKTEETFNKMRDLDLP--ITAFACNQLLLIYKKVDK-KKISDVLLLME 304
+++ +Y + N++K E +++ + + + IT F N L+L + K KK+ V+ ME
Sbjct: 291 SIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTF--NILILSFGKAGMYKKMCSVMDFME 348
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
K + TY I+I+T G++ I M+ + MK +G++PN +L Y+ AGL
Sbjct: 349 KRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVV 408
Query: 365 KAEAILQEI 373
K +++L++I
Sbjct: 409 KIDSVLRQI 417
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
M + V S F+Y LI+ G++ ++++ MK E I P+ + GL
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 363 K-EKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK---PGIDVCL 418
E + E+ E ++ ++ TLL A G DE E +++ + P +
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 419 AAVEAWGRLQKXXXXXXXXXXXXNKWKLSS-KNYSVLLKVYANHKMLKKGKDLIQRMGEN 477
VE +G+L++ + L +Y+VLL+ YA +K+ + +M
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 478 GCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
GC T+ L+ L+ Q+G + + + M+ S P TY ++E + + G
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLE-MKSSNTDPDAATYNILIEVFGEGG 401
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 120/290 (41%), Gaps = 29/290 (10%)
Query: 264 ETFNKMRDLD--------------LP-ITAFACNQLLLIYKKVDK-KKISDVLLLMEKEN 307
ETF K+R L+ LP IT++ N LL Y K K+ V M+
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSY--NVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 308 VKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAE 367
P+ TY +L++ GQS + Q+ MK+ +P+ L + G ++
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 368 AILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK---PGIDVCLAAVEAW 424
+ ++ EN+ ++ ++ G ++ +I + + + P +EA+
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 425 GRL----QKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCK 480
G+ + N S + + LL +A ++K+ + ++ R+ ++G
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNP---SIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 481 IGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYA 530
T+++ ++ Y Q G+ E+A ME+SR P T AV+ Y+
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVD-MEKSRCDPDERTLEAVLSVYS 573
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 286 LIYKKVDKKKISDV---LLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEG 342
LI+ + I DV L M + + P T L+ +S + + E +K+ G
Sbjct: 390 LIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYG 449
Query: 343 IEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVE 402
+ P+ ++ A+ Y +AG + E +++E++ + L+ + V LLR YA +G A+
Sbjct: 450 LRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAA 509
Query: 403 RIWKVVESKPGIDVCLAA----VEAWGRL-QKXXXXXXXXXXXXNKWKLSSKNYSVLLKV 457
I ++ + A VEA+G+ Q K K + L++
Sbjct: 510 GISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRA 569
Query: 458 YANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTP 517
Y L K L+ ++ ++G +IG +T+ LV G +E+A+ +L K+ + P
Sbjct: 570 YKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPP 629
Query: 518 M 518
Sbjct: 630 F 630
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 245 LYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLME 304
+Y ++ Y N +K + F+ M +P + N L+ + K++S + M+
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSYKEVSKIYDQMQ 306
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+ +++P +Y +LI G++ + E M G+ P H+ L + +G+ E
Sbjct: 307 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 366
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVE 409
+A+ + + + + + +LW T+L Y N + E+ +K ++
Sbjct: 367 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/394 (18%), Positives = 158/394 (40%), Gaps = 45/394 (11%)
Query: 151 ISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAE 210
I S G +V + + + L R + V ++ K + ++L+WL F+E
Sbjct: 80 IESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSE 139
Query: 211 KDYASVLDLIAKVSGLFRAENYIKKVPE--SFRGELLYRTLLANYASQNNLKKTEETFNK 268
D+ ++ K+ AE + + + S + Y L+ +Y
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGK---------- 189
Query: 269 MRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDI 328
CN I+++ M+ +PS TY+I++ T + +
Sbjct: 190 ------------CNNAEAIFRR------------MQSSGPEPSAITYQIILKTFVEGDKF 225
Query: 329 AGMEQIVETM---KAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVC 385
E++ ET+ K ++P+ ++ + Y AG EKA + + G+ + +
Sbjct: 226 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 285
Query: 386 PTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKW- 444
+L+ + + ++ + + +P + ++A+GR ++ +
Sbjct: 286 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 445 KLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWD--SLVKLYTQAGEVEKA 502
+ + K Y++LL +A M+++ K + + M + +I P W +++ Y A ++E A
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD--RIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 503 DAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVH 536
+ +++ + P TY +++ YAK DV
Sbjct: 404 EKFFKRI-KVDGFEPNIVTYGTLIKGYAKANDVE 436
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 245 LYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLME 304
+Y ++ Y N +K + F+ M +P + N L+ + K++S + M+
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSYKEVSKIYDQMQ 313
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+ +++P +Y +LI G++ + E M G+ P H+ L + +G+ E
Sbjct: 314 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 373
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVE 409
+A+ + + + + + +LW T+L Y N + E+ +K ++
Sbjct: 374 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/394 (18%), Positives = 158/394 (40%), Gaps = 45/394 (11%)
Query: 151 ISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAE 210
I S G +V + + + L R + V ++ K + ++L+WL F+E
Sbjct: 87 IESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSE 146
Query: 211 KDYASVLDLIAKVSGLFRAENYIKKVPE--SFRGELLYRTLLANYASQNNLKKTEETFNK 268
D+ ++ K+ AE + + + S + Y L+ +Y
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGK---------- 196
Query: 269 MRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDI 328
CN I+++ M+ +PS TY+I++ T + +
Sbjct: 197 ------------CNNAEAIFRR------------MQSSGPEPSAITYQIILKTFVEGDKF 232
Query: 329 AGMEQIVETM---KAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVC 385
E++ ET+ K ++P+ ++ + Y AG EKA + + G+ + +
Sbjct: 233 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 292
Query: 386 PTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKW- 444
+L+ + + ++ + + +P + ++A+GR ++ +
Sbjct: 293 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 445 KLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWD--SLVKLYTQAGEVEKA 502
+ + K Y++LL +A M+++ K + + M + +I P W +++ Y A ++E A
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD--RIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 503 DAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVH 536
+ +++ + P TY +++ YAK DV
Sbjct: 411 EKFFKRI-KVDGFEPNIVTYGTLIKGYAKANDVE 443
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 168/408 (41%), Gaps = 23/408 (5%)
Query: 141 KTESQLFKAIISSPGVSVQSALEKWVEKGK-ELNRPEISLAFVNLRKRKMYGRALQLLQW 199
K E L +I+ P + L ++ + K EL R ++ L + RA+ L +W
Sbjct: 106 KKEVVLVNSIVEQP----LTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEW 161
Query: 200 LEKNKKLEFAEKDYASVLDLIAKVSGLFRAENY------IKKVP--ESFRGELLYRTLLA 251
L + + D+ V+++ ++ G R Y + K+P E Y T+L
Sbjct: 162 LVLSSNSGALKLDH-QVIEIFVRILG--RESQYSVAAKLLDKIPLQEYLLDVRAYTTILH 218
Query: 252 NYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK--KKISDVLLLMEKENVK 309
Y+ +K + F +M+++ T N +L ++ K+ + +KI VL M + +K
Sbjct: 219 AYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLK 278
Query: 310 PSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAI 369
FT ++ + + ++ +K+ G EP AL + + AG+ +A ++
Sbjct: 279 FDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV 338
Query: 370 LQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK---PGIDVCLAAVEAWGR 426
L+E+E + + L+ Y G + E + +++ K P ++A+G+
Sbjct: 339 LKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK 398
Query: 427 LQKXXXXXXXXXXXXNKWKL-SSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLT 485
K + ++ Y+ +L + + ++ M NGC T
Sbjct: 399 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT 458
Query: 486 WDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
W++++ L G + + V ++ M+ P +T+ ++ Y + G
Sbjct: 459 WNTMLALCGNKGMDKFVNRVFRE-MKSCGFEPDRDTFNTLISAYGRCG 505
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 117/289 (40%), Gaps = 33/289 (11%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLLME 304
Y LL A + + + E + M+ T + + +L Y K + I + ++
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+ + PS + L+ + +AG E+ K G +P+ + ++ +T + +
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAW 424
+AE IL+ I + L +L +L+ +Y G+ + E I K +E
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK-------------- 694
Query: 425 GRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPL 484
++ K +Y+ ++K + ++++ ++ M E G +
Sbjct: 695 -----------------SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 485 TWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
T+++ V YT G + + V++ M ++ P T+ V++ Y + G
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIE-CMAKNDCRPNELTFKMVVDGYCRAG 785
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 305 KENVKPSHFTYKILIDT--KGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
K N++ S +TY +L + K +D+AG Q+ E MK++G+ PN+++ L + G
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAG--QMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153
Query: 363 KEKAEAILQ---EIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLA 419
A A+L E+EG C + L L K D VE K+ + C
Sbjct: 154 LHFATALLLQSFEVEG--------CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC-- 203
Query: 420 AVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGC 479
+K +++L++ +K +L+ M GC
Sbjct: 204 --------------------------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 480 KIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
+ +T+++L++ + ++ E+ KA + + V S +P TY +++ Y K G
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 305 KENVKPSHFTYKILIDT--KGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
K N++ S +TY +L + K +D+AG Q+ E MK++G+ PN+++ L + G
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAG--QMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153
Query: 363 KEKAEAILQ---EIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLA 419
A A+L E+EG C + L L K D VE K+ + C
Sbjct: 154 LHFATALLLQSFEVEG--------CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC-- 203
Query: 420 AVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGC 479
+K +++L++ +K +L+ M GC
Sbjct: 204 --------------------------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 480 KIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
+ +T+++L++ + ++ E+ KA + + V S +P TY +++ Y K G
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 38/283 (13%)
Query: 248 TLLANYASQNN-LKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEK- 305
TLL + +N + E+ F++MR+ + L I K + LL ++
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL--ISWNCRKGNMKRAFLLFDEL 355
Query: 306 --ENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLK 363
+ + PS +TY LID + ++ E ++ M+++G+ V L Y G+
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 364 EKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEA 423
++A I +E + + +++ C T+ + L + DE ++ W + G+
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ-WLFRMMEGGV--------- 465
Query: 424 WGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGP 483
KLS+ +Y+ L+ VY +++ K L M G +
Sbjct: 466 ---------------------KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 484 LTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVM 526
+T++ ++ Y + G++++A L+ ME + M P TY +++
Sbjct: 505 ITYNVMIYAYCKQGKIKEARK-LRANMEANGMDPDSYTYTSLI 546
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 244 LLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKK----KISDV 299
+L R+L++ + + L KT LD + C+ L+++++ K + +V
Sbjct: 69 VLVRSLMSRISDREPLVKT---------LDKYVKVVRCDHCFLLFEELGKSDKWLQCLEV 119
Query: 300 LLLMEKEN-VKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAAL--ARY 356
M+K+ P + Y LI G+ + MK G P+ V AL A
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 357 YTSAGLK--EKAEAILQEIEG-ENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPG 413
+T K EK L +++G E + N+ LLR +A GK D+V ++K ++ P
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSP- 238
Query: 414 IDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQR 473
+ + + ++ ++ Y + M+K+ + ++ R
Sbjct: 239 -----VSPDVY-------------------------TFNGVMDAYGKNGMIKEMEAVLTR 268
Query: 474 MGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAK 531
M N CK +T++ L+ Y + E EK + + +M +S+ P T+ +++ Y K
Sbjct: 269 MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM-RSKEKPTLPTFNSMIINYGK 325
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 53/299 (17%)
Query: 244 LLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKK----KISDV 299
+L R+L++ + + L KT LD + C+ L+++++ K + +V
Sbjct: 69 VLVRSLMSRISDREPLVKT---------LDKYVKVVRCDHCFLLFEELGKSDKWLQCLEV 119
Query: 300 LLLMEKEN-VKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAAL--ARY 356
M+K+ P + Y LI G+ + MK G P+ V AL A
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 357 YTSAGLK--EKAEAILQEIEG-ENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKP- 412
+T K EK L +++G E + N+ LLR +A GK D+V ++K ++ P
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 413 GIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQ 472
DV ++ ++ Y + M+K+ + ++
Sbjct: 240 SPDV--------------------------------YTFNGVMDAYGKNGMIKEMEAVLT 267
Query: 473 RMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAK 531
RM N CK +T++ L+ Y + E EK + + +M +S+ P T+ +++ Y K
Sbjct: 268 RMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM-RSKEKPTLPTFNSMIINYGK 325
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 59/301 (19%)
Query: 248 TLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL---ME 304
+L+ Y+ L+ + + FN M+D +L + N +L Y K+ + D + L ME
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGY--VDDAIGLLDEME 182
Query: 305 KENVKPSHFTYKILID---TKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAG 361
+KP T+ L+ +KG S D +++ M+ G++P+ ++L + G
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIA---VLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 362 LKEKAEAILQEIEGENLRDNLW----VCPTLLRLYANLGKADEVERIWKVVESKPGIDVC 417
+ +AI G LR+ LW V TL+ +Y G ++ ++++K
Sbjct: 240 HLKLGKAI----HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN----- 290
Query: 418 LAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGEN 477
+ AW L +S +Y+ LLK + L+ RM +
Sbjct: 291 ---IVAWNSL------------------VSGLSYACLLK---------DAEALMIRMEKE 320
Query: 478 GCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHN 537
G K +TW+SL Y G+ EKA V+ K M++ + P ++ A+ +K G+ N
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGK-MKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 538 S 538
+
Sbjct: 380 A 380
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 122/297 (41%), Gaps = 14/297 (4%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL-ME 304
+ TL+ Y L F++M +PI N ++ ++ LL ME
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
++ + P TY IL+ + DI + ++ G+ P+ A+ +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAW 424
+ EA++ E++ ++R + P ++++Y N G + + +++ + +D L++
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ----LDCVLSSTTLA 483
Query: 425 GRLQKXXXX---XXXXXXXXNKWKLSSKN-----YSVLLKVYANHKMLKKGKDLIQRMGE 476
+ K +S + Y+V++K Y K+ +K L + M
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 477 NGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
G T++SL ++ V++A +L ++++ S P TY A++ Y + G
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD-SGCKPGCKTYAAMIASYVRLG 599
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/236 (18%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 298 DVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYY 357
D+ MEK VKP+ Y LI+ +S + Q M+ G++ NH V +L + Y
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAY 665
Query: 358 TSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVC 417
+ G E+A + +++ ++ ++L L A+LG E E I+ + K DV
Sbjct: 666 SKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVI 725
Query: 418 LAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGEN 477
+++ ++ +Y ML + ++ + M E+
Sbjct: 726 --------------------------------SFATMMYLYKGMGMLDEAIEVAEEMRES 753
Query: 478 GCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
G +++ ++ Y G++ + + +++ + ++ + T+ + K G
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGG 809
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 20/330 (6%)
Query: 211 KDYASVLDLIAKVSGLFRAENYIKKVPESFRG----ELLYRTLLANYASQNNLKKTEETF 266
+ Y ++L K L AE+ + ++ + RG E Y L+ Y + +
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEK--RGVSPDEHTYSLLIDAYVNAGRWESARIVL 397
Query: 267 NKMRDLDLPITAFACNQLLLIYK-KVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQS 325
+M D+ +F ++LL ++ + + +K VL M+ VKP Y ++IDT G+
Sbjct: 398 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 326 NDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVC 385
N + + M +EGIEP+ L + G AE + + +E R C
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME----RRGCLPC 513
Query: 386 PT----LLRLYANLGKADEVERIWKVVESK---PGIDVCLAAVEAWGRLQKXXXXXXXXX 438
T ++ Y + + D+++R+ ++S+ P + V+ +G+ +
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Query: 439 XXXN-KWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAG 497
+ K SS Y+ L+ YA + ++ + + M +G K L +SL+ + +
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 498 EVEKADAVLQKVMEQSRMTPMFNTYMAVME 527
+A AVLQ M+++ + P TY +M+
Sbjct: 634 RDAEAFAVLQ-YMKENGVKPDVVTYTTLMK 662
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 5/241 (2%)
Query: 245 LYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLL-LM 303
Y ++ + N L TF++M + N L+ + K + +++ + M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 304 EKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLK 363
E+ P TY I+I++ G M++++ MK++GI PN L Y +G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 364 EKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVES---KPGIDVCLAA 420
A L+E++ L+ + + L+ YA G +++ ++V+ S KP + +
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 421 VEAWGRLQK-XXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGC 479
+ A+G ++ N K Y+ L+K +K + + M +GC
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGC 685
Query: 480 K 480
K
Sbjct: 686 K 686
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 32/228 (14%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
+ + +KP Y L+ ++ + E +V M+ G+ P+ + L Y +AG
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 363 KEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVE 422
E A +L+E+E +++ N +V LL + + G E ++ ++V++ I V
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGV------ 440
Query: 423 AWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIG 482
K + Y+V++ + L RM G +
Sbjct: 441 ----------------------KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 483 PLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYA 530
+TW++L+ + + G A+ + + ME+ P TY ++ Y
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFE-AMERRGCLPCATTYNIMINSYG 525
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 138/338 (40%), Gaps = 37/338 (10%)
Query: 202 KNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESF--RGELLYRTLLANYASQNNL 259
K + + + Y +V+ + L A N +K++ S ++Y TL+ + +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 260 KKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEKEN-VKPSHFTYKIL 318
+M++ + F N L++ K + + L+ EN +KP+ FTY
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 319 IDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAG-LKEKAEAILQEIEGEN 377
I ++++ A ++ V+ M+ G+ PN + L Y G + E A ++
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 378 LRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXX 437
L D + L+ N K D+ E I++ + K GI A + +
Sbjct: 589 LGDAKTYTVLMNGLFKN-DKVDDAEEIFREMRGK-GI-----APDVF------------- 628
Query: 438 XXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAG 497
+Y VL+ ++ ++K + M E G + ++ L+ + ++G
Sbjct: 629 ------------SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 498 EVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDV 535
E+EKA +L + M + P TY +++ Y K GD+
Sbjct: 677 EIEKAKELLDE-MSVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 134/333 (40%), Gaps = 15/333 (4%)
Query: 213 YASVLDLIAKVSGLFRAENYIKKVPES--FRGELLYRTLLANYASQNNLKKTEETFNKMR 270
Y + + + S A+ Y+K++ E ++L L+ Y + + + + M
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM- 583
Query: 271 DLDLPITAFACNQLLLIYKKVDKKKISD---VLLLMEKENVKPSHFTYKILIDTKGQSND 327
+D I A +L+ K+ D + M + + P F+Y +LI+ + +
Sbjct: 584 -VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 328 IAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPT 387
+ I + M EG+ PN + L + +G EKA+ +L E+ + L N T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 388 LLRLYANLGKADEVERIWKVVESK---PGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKW 444
++ Y G E R++ ++ K P V V+ RL
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 445 KLSSKNYSVLLK-VYANHKMLKKGKDLIQRMGENGCKIGP---LTWDSLVKLYTQAGEVE 500
S+ ++ L+ V+ K K + L + M + + G +T++ ++ + G +E
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 501 KADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
A + + M+ + + P TY +++ Y K G
Sbjct: 823 AAKELFHQ-MQNANLMPTVITYTSLLNGYDKMG 854
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 29/250 (11%)
Query: 299 VLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYT 358
VL M + + PS ++Y IL+D + ++ + IV MK G+ P+ L Y
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 359 SAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIW-KVVESKPGID-- 415
S G + A+++LQE+ N N + C LL +G+ E E + K+ E G+D
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 416 VCLAAVEAW---GRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLI- 471
C V+ G L K ++V+ + + G I
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKG------------------MRVHGSAALGNLGNSYIG 509
Query: 472 ---QRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQ 528
+ EN C +T+ +L+ +AG +A + ++M + ++ P Y +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHH 568
Query: 529 YAKRGDVHNS 538
+ K+G + ++
Sbjct: 569 FCKQGKISSA 578
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 203 NKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVP--ESFRGELLYRTLLANYASQNNLK 260
N+++E Y ++LD I K + A + ++P + Y T++ +A
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 261 KTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKIS-DVLLLMEKENVKPSHFTYKILI 319
+ F +MR L + + + N LL IY KV + + + D+L M +K TY L+
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 320 DTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLR 379
G+ ++++ MK E + PN + L Y+ GL ++A I +E + LR
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 380 DNLWVCPTLL 389
++ + L+
Sbjct: 547 ADVVLYSALI 556
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 213 YASVLDLIAKVSGLFR-AENYIKKVPES--FRGELLYRTLLANYASQNNLKKTEETFNKM 269
Y S++++ K + LFR A IK++ E+ + Y TLL+ Y + + F +M
Sbjct: 263 YNSMINVYGK-AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 321
Query: 270 RDLDLPITAFACNQLLLIYKKVDKKKISDVLLL-MEKENVKPSHFTYKILIDTKGQSNDI 328
++++ + CN ++ +Y ++D K +D L + K +++P+ +Y ++ G++
Sbjct: 322 KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 381
Query: 329 AGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTL 388
+ M+ + IE N + + Y EKA ++QE++ + N T+
Sbjct: 382 GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 441
Query: 389 LRLYANLGKADEVERIWKVVESKPGIDV 416
+ ++ GK D +++ + S G+++
Sbjct: 442 ISIWGKAGKLDRAATLFQKLRSS-GVEI 468
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 114/271 (42%), Gaps = 13/271 (4%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIY-KKVDKKKISDVLLLME 304
Y T+L Y + F M+ D+ N ++ IY K ++ +K ++++ M+
Sbjct: 368 YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
++P+ TY +I G++ + + + +++ G+E + + + Y GL
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 487
Query: 365 KAEAILQEIEGENLRDNLWVCP--TLLRLYANLGKADEVERIWK-VVESKPGIDVCL--A 419
A+ +L E++ L DN+ P T + + A G+ +E +++ ES D+ +
Sbjct: 488 HAKRLLHELK---LPDNI---PRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGC 541
Query: 420 AVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNY-SVLLKVYANHKMLKKGKDLIQRMGENG 478
+ + R Q+ N +++L Y + +K + + M E G
Sbjct: 542 MINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Query: 479 CKIGPLTWDSLVKLYTQAGEVEKADAVLQKV 509
C ++ LY+ + E +++ Q++
Sbjct: 602 CVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 632
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Query: 250 LANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLLMEKENV 308
L + ++ E + K + + N LL Y K + KK+S V+ M+K +
Sbjct: 299 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 358
Query: 309 KPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEA 368
+ TY ++ID G++ D+ ME + M++E I P+ +L R Y A +K
Sbjct: 359 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGG 418
Query: 369 ILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK 411
+L+ IE ++R +L L+ Y + K E++ + +++E K
Sbjct: 419 VLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKK 461
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 119/275 (43%), Gaps = 9/275 (3%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK--KKISDVLLLM 303
Y L+ ++ K ++ + MR + N L+ Y K + S ++ ++
Sbjct: 224 YSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQML 283
Query: 304 EKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLK 363
+++ KP +T + G + I ME E ++ GIEPN + L Y +G
Sbjct: 284 GEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNY 343
Query: 364 EKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCL---AA 420
+K A+++ ++ + + ++ + G ++E ++++++S+ C+ +
Sbjct: 344 KKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSL 403
Query: 421 VEAWGRLQKXXXXXXXXXXXXNK-WKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGC 479
V A+GR K N +L ++ L+ Y + + K +++ M + G
Sbjct: 404 VRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGF 463
Query: 480 KIGPLTWDSLVKLYTQAG---EVEKADAVLQKVME 511
K +T+ ++VK Y +G V++ V++ V E
Sbjct: 464 KPDKITYRTMVKAYRISGMTTHVKELHGVVESVGE 498
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 11/274 (4%)
Query: 245 LYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLL--L 302
+Y L+ +K E F +M + + L+ Y + + + LL +
Sbjct: 152 IYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERM 211
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
N +P TY ILI + Q ++ ++ M+ +GI PN L Y A +
Sbjct: 212 KSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKM 271
Query: 363 KEKAEAILQEIEGE-NLRDNLWVCPTLLRLYANLGKADEVERIWKVVES---KPGI---D 415
+ E+ L ++ GE + + + W + LR + G+ + +E ++ +S +P I +
Sbjct: 272 FVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFN 331
Query: 416 VCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMG 475
+ L + G +K W + + Y+V++ + LK+ + L + M
Sbjct: 332 ILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT--YNVVIDAFGRAGDLKQMEYLFRLMQ 389
Query: 476 ENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKV 509
+T SLV+ Y +A + +K VL+ +
Sbjct: 390 SERIFPSCVTLCSLVRAYGRASKADKIGGVLRFI 423
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 174/411 (42%), Gaps = 28/411 (6%)
Query: 144 SQLFKAIISSPGVS-----VQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQ 198
S+++ ++I + V S + K E+G E++ S+ K G A
Sbjct: 344 SRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKA---GHAEAADY 400
Query: 199 WLEKNKKLE--FAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGE--LLYRTLLANYA 254
W ++ K++ Y ++ + + RAE ++++ E +Y T++ Y
Sbjct: 401 WFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT 460
Query: 255 SQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLMEKENVKPSHF 313
+ KK F ++++ T L+ +Y KV K K +V +M++E VK +
Sbjct: 461 MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK 520
Query: 314 TYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEI 373
TY ++I+ + D A + E M EG++P+ + + + G ++A ++E+
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 374 EGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAW-----GRLQ 428
+ R ++ YA G ++ ++ + G C+ V + G ++
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR-RCG---CVPTVHTFNGLINGLVE 636
Query: 429 KXXXXXXXXXXXXNKWKLSSKN---YSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLT 485
K S N Y+ +++ YA+ K + R+ G + T
Sbjct: 637 KRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFT 696
Query: 486 WDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFN-TYMAVMEQYAKRGDV 535
+++L+K ++G ++ A AV +++ +R P + Y +++ +A+RGDV
Sbjct: 697 YEALLKACCKSGRMQSALAVTKEM--SARNIPRNSFVYNILIDGWARRGDV 745
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 243 ELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKIS-DVLL 301
E Y ++ YAS + K E F ++++ L + F LL K + + + V
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 302 LMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAG 361
M N+ + F Y ILID + D+ +++ MK EG++P+ + + AG
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 362 LKEKAEAILQEIEGENLRDNLWVCPTLLRLYA 393
+A ++E+E ++ N+ TL++ +A
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 210 EKDYASVLDLIAKVSGLFRAENYIKKVP-ESFRGELL-YRTLLANYASQNNLKKTEETFN 267
E Y ++ A V +A Y ++ E ++ Y LL ++
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 268 KMRDLDLPITAFACNQLLLIY-KKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSN 326
+M ++P +F N L+ + ++ D + +D++ M+KE VKP TY I ++
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 327 DIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCP 386
D+ Q +E M+A G++PN + L + + A L EKA + +E++ ++ + V
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 387 TLL 389
LL
Sbjct: 839 CLL 841
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 117/289 (40%), Gaps = 33/289 (11%)
Query: 244 LLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLL 302
+LY +++ + N+ + +T +M+ L T ++ Y K D ++ +V +
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
M + P+ T+ LI+ + + +I++ M G+ N + + Y S G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 363 KEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVE 422
KA ++ E L +++ LL+ G+ + K + ++
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR----------- 723
Query: 423 AWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIG 482
+S Y++L+ +A + + DLIQ+M + G K
Sbjct: 724 --------------------NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 483 PLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAK 531
T+ S + ++AG++ +A +++ ME + P TY +++ +A+
Sbjct: 764 IHTYTSFISACSKAGDMNRATQTIEE-MEALGVKPNIKTYTTLIKGWAR 811
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 127/302 (42%), Gaps = 14/302 (4%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYK-KVDKKKISDVLLLME 304
+ ++ Y + ++ + ETF +MR + T+ L+ Y D + + M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+E ++ S TY +++ ++ + + K N + + + E
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADE-----VERIWKVVESKPGIDV--C 417
+AEA+++E+E E + + + T++ Y + ADE V + K P + C
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMV--ADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 418 LAAVEA-WGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGE 476
L + G++ K K L K YS+++ + K + + M +
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNL--KTYSMMINGFVKLKDWANAFAVFEDMVK 547
Query: 477 NGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVH 536
G K + +++++ + G +++A +++ M++ R P T+M ++ YAK GD+
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKE-MQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 537 NS 538
S
Sbjct: 607 RS 608
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
MEK +K ILIDT ++ + ++++ MK GI PN ++L +G
Sbjct: 39 MEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR 98
Query: 363 KEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWK-VVESKPGIDVCLAAV 421
AE L E++ + + N+ L+ YA GK +V+ ++K +++ +V +
Sbjct: 99 LADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSS 158
Query: 422 EAWGRLQKXXXXXXXXXXXXNKWKLSSKN---YSVLLKVYANHKMLKKGKDLIQRMGENG 478
+G K + N YS L + + G L+ M + G
Sbjct: 159 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Query: 479 CKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDV 535
++ ++L+K Y QAG+++ A V M + + P +Y V+ G+V
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFG-YMTSNGLIPNIRSYNIVLAGLFANGEV 274
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/294 (17%), Positives = 131/294 (44%), Gaps = 6/294 (2%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLME 304
Y +++ + + N+++ ++M +P++ A L+ Y K ++ K D+ ME
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+E + P + ++++ ++ ++ + MK+ I P+ + + + A E
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK---PGIDVCLAAV 421
A I + E+ + ++C + L+ GK D K++E K P + +
Sbjct: 433 AALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 422 EAWGRLQKXXXXXXXXXXXXNK-WKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCK 480
A R++ K + ++ YS+L+ + +K + D+I +M + +
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE 551
Query: 481 IGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGD 534
+ +++++ + G+ KA +LQ ++++ R + +Y ++++ + K GD
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD 605
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKK--KISDVLLLM 303
Y T++A Y + M+ ++ A N LL Y K DK+ K +L M
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK-DKQMEKFRSILKRM 794
Query: 304 EKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLK 363
+K P H+TY I+I+ G+ I + +++ +K G+ P+ L + Y G+
Sbjct: 795 KKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMV 854
Query: 364 EKAEAILQEIEGENL 378
E+A +++E+ G N+
Sbjct: 855 EEAVGLVKEMRGRNI 869
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 5/235 (2%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
MEK+ +KP H Y LI + ++ E+ V MK +G+ P+ + L Y
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 363 KEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK---PGIDVCLA 419
+K IL+E+E N+ TL+ K E + + + +E + P + +
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 420 AVEAWGRLQKXXXXXXXXXXXXNK-WKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENG 478
++ K K +L+ Y+ L+ + L + +DL+ + G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 479 CKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
K T++SL+ Y AG V++ A+ ++ M++S + P TY ++ K G
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEE-MKRSGIKPTLKTYHLLISLCTKEG 648
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 155/360 (43%), Gaps = 13/360 (3%)
Query: 182 VNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPES-F 240
V L + KM A L L +N+ + + +LD + K N + ES F
Sbjct: 117 VLLNESKMISEAADLFFAL-RNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDF 175
Query: 241 R-GELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDV 299
R + +Y + +++ K E FN+M+ + + F N +LI K+++D
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYN--VLIDGLCKGKRMNDA 233
Query: 300 LLL---MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARY 356
L M + PS TY LID ++ + ++ E MKA+ IEP+ L +
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 357 YTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKV-VESKPGID 415
AG+ E AE +L+E++ + + L Y++ KA+ +++ V+S ++
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 416 --VCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKN-YSVLLKVYANHKMLKKGKDLIQ 472
C + A + K K + ++ Y+ ++ Y L + I+
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 473 RMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKR 532
M + G K L ++ L++ + + GE+E A+ + K M+ ++P TY ++ Y ++
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK-MKLKGVSPSVETYNILIGGYGRK 472
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 144/372 (38%), Gaps = 54/372 (14%)
Query: 178 SLAFVNLRKRKMYGRALQLLQWLEKNKKLE-FAEKDYASVLDLIAK-VSGLFRAENYIKK 235
SL F + + K++ R+ + ++E LE K Y + L K + G F N K
Sbjct: 84 SLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA 143
Query: 236 V-----------PESFRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQL 284
V P+ F Y L+ + N + ++MR D N
Sbjct: 144 VRVMEILEKFGQPDVFA----YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN-- 197
Query: 285 LLIYKKVDKKKISDVLLLMEK---ENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAE 341
++I + K+ L ++ + +N +P+ TY ILI+ + ++++ M +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 342 GIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEV 401
G++P+ + R G+ ++A +++ +E + ++ LLR N GK +E
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 402 ERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANH 461
E++ + S+ K + YS+L+
Sbjct: 318 EKLMTKMFSE-------------------------------KCDPNVVTYSILITTLCRD 346
Query: 462 KMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNT 521
+++ +L++ M E G ++D L+ + + G ++ A L+ ++ + + N
Sbjct: 347 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN- 405
Query: 522 YMAVMEQYAKRG 533
Y V+ K G
Sbjct: 406 YNTVLATLCKNG 417
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 108/238 (45%), Gaps = 7/238 (2%)
Query: 178 SLAFVNLRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVP 237
SL + L K ALQ +W E++ + + ++ ++ +VS L A + +P
Sbjct: 118 SLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMP 177
Query: 238 ESFRG----ELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK 293
E +G E ++ L+ +Y ++++ + F KM+DL + T + N L + + +
Sbjct: 178 E--KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 294 KKISDVLL-LMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAA 352
++ M E V+P+ TY +++ S + + E MK GI P+
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 353 LARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVES 410
+ + ++AE + E++G + ++ T+++ Y + + D+ RI++ + S
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS 353
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 117/296 (39%), Gaps = 59/296 (19%)
Query: 184 LRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENY--IKKVPESF- 240
L++ Y AL WL++ + Y ++ V L RA+ + I K+ +
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTM------VGNLGRAKQFGEINKLLDEMV 386
Query: 241 -----RGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKK 295
+ Y L+ +Y N LK+ FN+M++ L+ I+ K
Sbjct: 387 RDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLD 446
Query: 296 IS-DVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPN---HQVQA 351
I+ D+ M++ + P FTY ++I+ G++ + ++ M +G PN +
Sbjct: 447 IAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 352 AL---ARYYTSA-----------------------------GLKEKAEAILQEIEGENLR 379
AL AR Y +A G E+AE + E++ +N
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 380 DNLWVCPTLLRLYANLGKADEVERIWKVVES------KPGIDVCLAAVEAWGRLQK 429
+ V L+ L+ GKA V++ W+ ++ +P + C + + + R+ +
Sbjct: 567 PDEPVYGLLVDLW---GKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 213 YASVLDLIAKVSGLFRAENYIKKVPES-FRGEL-LYRTLLANYASQNNLKKTEETFNKMR 270
Y +++L+ K + AE + ++ E+ F+ EL ++ ++L Y + + KKT + + +++
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 271 DLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEKENV--KPSHFTYKILIDTKGQSNDI 328
+ L N L+++Y + D++ LL+ + N+ P TYK LI G+ +
Sbjct: 955 ETGLEPDETTYNTLIIMYCR-DRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 329 AGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTL 388
EQ+ E + ++G++ + + + +G KAE +LQ ++ + L L
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 389 LRLYANLGKADEVERI 404
+ Y++ G E E++
Sbjct: 1074 MVSYSSSGNPQEAEKV 1089
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 240 FRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDV 299
F + Y +LL +A + N +K +E + +M+ + N ++ +Y K + D+
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL---DL 420
Query: 300 LLLMEKE-----NVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALA 354
L + K+ P TY +LID+ G++N ++ M GI+P Q +AL
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 355 RYYTSAGLKEKAE 367
Y AG +E+AE
Sbjct: 481 CGYAKAGKREEAE 493
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 127/309 (41%), Gaps = 29/309 (9%)
Query: 240 FRGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDV 299
F +Y TLL + + + + F+ +R + C ++++Y K+ + +
Sbjct: 678 FGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQ 737
Query: 300 LLLMEKENVKPSHFT----YKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALAR 355
++ + K HF Y +I+ G+ E +V ++ G P+ + +L
Sbjct: 738 VV--NQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMS 795
Query: 356 YYTSAGLKEKAEAILQEIEGENLRDNLWVCPTL----LRLYANLGKADEVERIWKVVE-- 409
Y G E+A AI + +RD PT+ + L+A L +E ++ VVE
Sbjct: 796 AYAQCGCYERARAIFNTM----MRDG--PSPTVESINILLHA-LCVDGRLEELYVVVEEL 848
Query: 410 -------SKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHK 462
SK I + L A G + + + + + Y +++++ K
Sbjct: 849 QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA--GYLPTIRLYRMMIELLCKGK 906
Query: 463 MLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTY 522
++ + ++ M E K+ W+S++K+YT + +K V Q++ E + P TY
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG-LEPDETTY 965
Query: 523 MAVMEQYAK 531
++ Y +
Sbjct: 966 NTLIIMYCR 974
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 192 RALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLA 251
+AL++ W+ ++K +D+++ LI V GL AE Y + +PE+ RGE LY LL
Sbjct: 58 QALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLYTALLR 117
Query: 252 NYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEKENVKPS 311
+YA ++ K + D I++F + K+ + L M++ N+
Sbjct: 118 SYAKRSEKKYLDRASRIHIQEDERISSFGT-----------RDKVDESLREMKESNIDLD 166
Query: 312 HFTYKILIDTKGQSNDIAGMEQIV 335
T + ++D+A ME+ +
Sbjct: 167 RLTVNKALRVYAAASDVAAMERFL 190
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 13/244 (5%)
Query: 298 DVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYY 357
D+L ME+ NVK FTY +ID+ + I + + M+ +GI+ + +L R
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 358 TSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVC 417
AG +L+++ + N+ LL ++ GK E ++K + ++ GI
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GIS-- 330
Query: 418 LAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKN--------YSVLLKVYANHKMLKKGKD 469
+ + L N L +N ++ L+K Y K + G
Sbjct: 331 -PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 470 LIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQY 529
+ + + + G +T+ LV+ + Q+G+++ A+ + Q+++ + P TY +++
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGL 448
Query: 530 AKRG 533
G
Sbjct: 449 CDNG 452
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 53/293 (18%)
Query: 184 LRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFR-- 241
L++ YG AL WL++ + Y +++ + + F A N K + E R
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAIN--KLLDEMVRDG 394
Query: 242 ---GELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKIS- 297
+ Y L+ +Y N L + FN+M++ L+ I+ K I+
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 298 DVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPN---HQVQAAL- 353
D+ M+ + P FTY ++I+ G++ + ++ M +G PN + + L
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 354 --ARYYTSA-----------------------------GLKEKAEAILQEIEGENLRDNL 382
AR Y +A G E+AEA+ E++ +N +
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 383 WVCPTLLRLYANLGKADEVERIWKVVES------KPGIDVCLAAVEAWGRLQK 429
V L+ L+ GKA VE+ W+ ++ +P + C + + + R+ K
Sbjct: 575 PVYGLLVDLW---GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 53/293 (18%)
Query: 184 LRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFR-- 241
L++ YG AL WL++ + Y +++ + + F A N K + E R
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAIN--KLLDEMVRDG 394
Query: 242 ---GELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKIS- 297
+ Y L+ +Y N L + FN+M++ L+ I+ K I+
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 298 DVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPN---HQVQAAL- 353
D+ M+ + P FTY ++I+ G++ + ++ M +G PN + + L
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 354 --ARYYTSA-----------------------------GLKEKAEAILQEIEGENLRDNL 382
AR Y +A G E+AEA+ E++ +N +
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 383 WVCPTLLRLYANLGKADEVERIWKVVES------KPGIDVCLAAVEAWGRLQK 429
V L+ L+ GKA VE+ W+ ++ +P + C + + + R+ K
Sbjct: 575 PVYGLLVDLW---GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 132/333 (39%), Gaps = 6/333 (1%)
Query: 213 YASVLDLIAKVSGLFRAENYIKKVPESFRGELLYRTLLANYASQNNLKKTEETFNKMRDL 272
Y+S++ L + E + V F G+L + + + N + N + +
Sbjct: 109 YSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLET 168
Query: 273 DLPIT-AFACNQLLLIYKKV-DKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAG 330
P N + +++K D +K + M + +KP + T+ +I Q+
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 331 MEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLR 390
+ E M + G EP++ AA+ Y AG + A ++ E R + TL+R
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 391 LYANLGKADEVERIW---KVVESKPGIDVCLAAVEAWGRLQKX-XXXXXXXXXXXNKWKL 446
+Y G D I+ K + KP + + +++ GR ++ N +
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 447 SSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVL 506
+ Y+ L++ Y + + + M E G + + +++L+ + V++A +
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 507 QKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNSE 539
Q + P T+ +++ YA G V +E
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAE 441
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 53/293 (18%)
Query: 184 LRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPESFR-- 241
L++ YG AL WL++ + Y +++ + + F A N K + E R
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK-QFGAIN--KLLDEMVRDG 394
Query: 242 ---GELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKIS- 297
+ Y L+ +Y N L + FN+M++ L+ I+ K I+
Sbjct: 395 CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 298 DVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPN---HQVQAAL- 353
D+ M+ + P FTY ++I+ G++ + ++ M +G PN + + L
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 354 --ARYYTSA-----------------------------GLKEKAEAILQEIEGENLRDNL 382
AR Y +A G E+AEA+ E++ +N +
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 383 WVCPTLLRLYANLGKADEVERIWKVVES------KPGIDVCLAAVEAWGRLQK 429
V L+ L+ GKA VE+ W+ ++ +P + C + + + R+ K
Sbjct: 575 PVYGLLVDLW---GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 147/357 (41%), Gaps = 27/357 (7%)
Query: 193 ALQLLQWLEKNKKLEFAEKDYASVLDLIAK---VSGLFRAENYIKKVPESFRGELLYRTL 249
AL W+ +N + + + YAS+L L+ V +F+ + K +S G+ LY
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSV-GDALYVLD 164
Query: 250 LANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEKENVK 309
L ++ +E F L + N L + VD+ K V + M ++ V
Sbjct: 165 LCRKMNK------DERFELKYKLIIGCYNTLLNSLAR-FGLVDEMK--QVYMEMLEDKVC 215
Query: 310 PSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAI 369
P+ +TY +++ + ++ Q V + G++P+ +L Y + A +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 370 LQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQK 429
E+ + R N L+ + DE ++ ++ D C V + L K
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD----DECFPTVRTYTVLIK 331
Query: 430 XXXXXXXXXXXXN--------KWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKI 481
N K + Y+VL+ + +K ++L+ +M E G
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 482 GPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDVHNS 538
+T+++L+ Y + G +E A V++ +ME +++P TY +++ Y K +VH +
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVE-LMESRKLSPNTRTYNELIKGYCK-SNVHKA 446
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 131/301 (43%), Gaps = 13/301 (4%)
Query: 241 RGELLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVL 300
R E+ Y L+ + + + F KM+D + T +LI ++ S+ L
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT--YTVLIKSLCGSERKSEAL 343
Query: 301 LL---MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYY 357
L ME+ +KP+ TY +LID+ +++ M +G+ PN AL Y
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 358 TSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLY--ANLGKADEVERIWKVVESK--PG 413
G+ E A +++ +E L N L++ Y +N+ KA V + K++E K P
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV--LNKMLERKVLPD 461
Query: 414 IDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSK-NYSVLLKVYANHKMLKKGKDLIQ 472
+ + ++ R ++ + + Y+ ++ K +++ DL
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 473 RMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKR 532
+ + G + + +L+ Y +AG+V++A +L+K++ ++ + P T+ A++
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCAD 580
Query: 533 G 533
G
Sbjct: 581 G 581
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 132/336 (39%), Gaps = 21/336 (6%)
Query: 213 YASVLDLIAKVSGLFRAENYIKKVPESFRGE--LLYRTLLANYASQNNLKKTEETFNKMR 270
Y +++ K+ + A Y+ K+ E+ Y +L+ Y + +L + FN+M
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM- 279
Query: 271 DLDLPITAFACNQL--------LLIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTK 322
P+ N++ L + +++D+ D+ + M+ + P+ TY +LI +
Sbjct: 280 ----PLKGCRRNEVAYTHLIHGLCVARRIDEAM--DLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 323 GQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNL 382
S + +V+ M+ GI+PN L S EKA +L ++ + L N+
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 383 WVCPTLLRLYANLGKADEVERIWKVVESK---PGIDVCLAAVEAWGRLQKXXXXXXXXXX 439
L+ Y G ++ + +++ES+ P ++ + +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 440 XXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEV 499
K Y+ L+ L+ M + G T+ S++ ++ V
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 500 EKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGDV 535
E+A + +EQ + P Y A+++ Y K G V
Sbjct: 514 EEACDLFDS-LEQKGVNPNVVMYTALIDGYCKAGKV 548
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 116/285 (40%), Gaps = 35/285 (12%)
Query: 245 LYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLM 303
LY TL+++ A + E F++M + + L+ + + K ++
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 304 EKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEG--IEPNHQVQAALARYYTSAG 361
+NVKP + LI GQS + ++ MKAE I+P+H AL + +AG
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 362 LKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAV 421
E+A+ + Q I +R V + + G D I+K ++ K DV V
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK---DVTPDEV 680
Query: 422 EAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKI 481
+S L+ V + KML + ++Q G ++
Sbjct: 681 ----------------------------FFSALIDVAGHAKMLDEAFGILQDAKSQGIRL 712
Query: 482 GPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVM 526
G +++ SL+ A + +KA + +K+ + ++ P +T A++
Sbjct: 713 GTISYSSLMGACCNAKDWKKALELYEKI-KSIKLRPTISTMNALI 756
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 120/276 (43%), Gaps = 11/276 (3%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLLME 304
Y L++ Y +K E F +++ + LP + N L+ Y + K+ M+
Sbjct: 177 YNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMK 236
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAE-GIEPNHQVQAALARYYTSA--G 361
+ V+P TY++++ S ++ ME++ E +K + G+ V+A + Y A
Sbjct: 237 RGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIKDQVGVNSGPLVRAMICAYCKKAVED 296
Query: 362 LKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVE-RIWKVVESKPGID---VC 417
+K E +L + GE W+ L+RLYA + +E +I + E K ++ +
Sbjct: 297 RVQKIENLLSLLSGEEYLP--WLNVLLIRLYAQEDFVEAMESKINEAFEQKTCVNKSSIM 354
Query: 418 LAAVEAWGRLQKXXXXXXXXXXXXNK-WKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGE 476
A + A+ R + + WKL Y + +Y + K ++ + ++ M E
Sbjct: 355 RAIIAAYFRCNEVDNLANFVKRAESAGWKLCRSLYHCKIMMYGSQKRFEEMEGVVNEMAE 414
Query: 477 NGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQ 512
+ T+ ++K Y G A+ V K++++
Sbjct: 415 TNYGLVTKTFAIMIKAYKNHGMESDAEKVKGKMLKR 450
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 10/198 (5%)
Query: 193 ALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPES--FRGELLYRTLL 250
A++L + + ++K E E Y ++D + L A N +K++ S R + Y TL+
Sbjct: 419 AMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 251 ANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLMEK---EN 307
+ N ++ EE F++M + + N L I +++ D LM++ E
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL--IDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 308 VKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAE 367
KP +TY L+ + DI IV+ M + G EP+ L AG E A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 368 AILQEIE--GENLRDNLW 383
+L+ I+ G NL + +
Sbjct: 596 KLLRSIQMKGINLTPHAY 613
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 249 LLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKV-DKKKISDVLLLMEKEN 307
++ Y + ++ +M+++ + N L+ + +V D+ I +VL LM++ N
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECN 325
Query: 308 VKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAE 367
VK TY +++ + + Q+ + M G++P+ + LA+ Y A +KAE
Sbjct: 326 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 385
Query: 368 AILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEA--WG 425
+L+ + E+ R N+ + T++ + + G D+ R++ + K G+ + E WG
Sbjct: 386 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKM-CKFGVSPNIKTFETLMWG 443
Query: 426 RLQ 428
L+
Sbjct: 444 YLE 446
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 11/242 (4%)
Query: 297 SDVLLLMEKENVKPSHFTYKILID---TKGQSNDIAGMEQIVETMKAEGIEPNHQVQAAL 353
S +LL M + KP TY ILI G +D M+ + G+ P+ + L
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV---KLIDRGVSPDAAIYNML 456
Query: 354 ARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKV-VESKP 412
G A+ + E+ N+ + +V TL+ + G DE +++ + VE
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 413 GIDVCL--AAVEAWGRLQKXXXXXXXXXXXXNKWKLSSK-NYSVLLKVYANHKMLKKGKD 469
+DV A ++ + R + + K YS ++ Y + +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 470 LIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQY 529
+ + M +N CK +T+ SL+ + G+ + A+ ++ M+ + P TY ++
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE-MQLRDLVPNVVTYTTLIRSL 635
Query: 530 AK 531
AK
Sbjct: 636 AK 637
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 116/280 (41%), Gaps = 42/280 (15%)
Query: 294 KKISDVLLLMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAAL 353
KK +VL M K ++P + + L+D ++ + ++ E M+ E PN + +L
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSL 242
Query: 354 ARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESK-- 411
+ G +A+ +L +++ L ++ V LL YA+ GK + + + +
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 412 -PGIDVCLAAVEAWGRLQKXXXXXXXXXXXXN-------------------KWKLSSKNY 451
P ++ ++A R +K KW + K Y
Sbjct: 303 EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGY 362
Query: 452 SVL---------------LKVYANHK---MLKKGKDLIQRMGENGCKIGPLTWDSLVKLY 493
SVL +++ H+ ++ +LI++M GC L ++ +++L
Sbjct: 363 SVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLA 422
Query: 494 TQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
+ GEV++A L ME + ++P +T++ ++ + +G
Sbjct: 423 CKLGEVKEA-VRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 20/247 (8%)
Query: 302 LMEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAG 361
++ KE + P T+ ++I+ ++ ++ ++I++ MK G PN +AL + G
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 362 LKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPG------ID 415
++A+ E++ L+ + TL+ + G+ DE ++ +++ +
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 416 VCLAAVEAWGRLQKXXXXXXXXXXXXNKW-----KLSSKNYSVLLKVYANHKMLKKGKDL 470
V L + + GR ++ ++W L+ +Y ++L + L+K
Sbjct: 378 VILRGLSSEGRSEE-------ALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 471 IQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYA 530
+ M E G TW+ LV ++G E VL + + P ++ AV+E
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG-LIPGPKSWGAVVESIC 489
Query: 531 K-RGDVH 536
K R VH
Sbjct: 490 KERKLVH 496
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 164/385 (42%), Gaps = 22/385 (5%)
Query: 148 KAIISSPGVSVQSALEKWVEKGKELNRPEISLAFVNLRKRKMYGRALQLLQWLEKNKKLE 207
K ++SSP + + SAL+ + G +++ + R + + QW EK + E
Sbjct: 77 KVLMSSPQLVLDSALD---QSGLRVSQEVVEDVLNRFRNAGLL--TYRFFQWSEKQRHYE 131
Query: 208 FAEKDYASVLDLIAKVSGLFRAENYIKKVPESFRGELL-----YRTLLANYASQNNLKKT 262
+ + Y +++ AK+ R + + + R + + + ++ YA + +
Sbjct: 132 HSVRAYHMMIESTAKI----RQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEA 187
Query: 263 EETFNKMRDLDLPITAFACNQLL-LIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDT 321
FN M DLP A N LL + K + +K +V M ++ P TY IL++
Sbjct: 188 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEG 246
Query: 322 KGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDN 381
G+ ++ ++ M G P+ + + AG ++A I++ ++ +
Sbjct: 247 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 306
Query: 382 LWVCPTLLRLYANLGKADE-VERIWKVVESKPGIDVCL--AAVEAWGRLQKXXXXXXXXX 438
++ L+ Y + +E V+ ++ S DV + + + A+ + +
Sbjct: 307 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 366
Query: 439 XXXNKWKL-SSKNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAG 497
+K +SK+ +++L+ + D+ ++M + C+ T+ ++K++ +
Sbjct: 367 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKK 425
Query: 498 EVEKADAVLQKVMEQSRMTPMFNTY 522
E+E AD V K M + + P +T+
Sbjct: 426 EMETADKVW-KYMRKKGVFPSMHTF 449
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 246 YRTLLANYASQNNLKKTEETFNKM-RDLDLPITAFACNQLLLIYKKVDKKKISDVLLL-M 303
Y T++ + +K+ F++M R+ LP A N ++ + K D + + V+ M
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA-TYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 304 EKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLK 363
+ +P+ TY +LI + + + E++++ M+ EG EPN Q + RYY+
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 364 EKAEAILQEIEGENLRDNL 382
EKA + +++ + NL
Sbjct: 387 EKALGLFEKMGSGDCLPNL 405
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 5/183 (2%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDK-KKISDVLLLME 304
Y T+L + ++ E F +M+ D I ++ + + K+ +V M
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 305 KENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKE 364
+E V PS TY +I + +++ + E M G EPN L R AG
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 365 KAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAW 424
+ E ++Q +E E N ++R Y+ + EVE+ + E K G CL ++ +
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYS---ECSEVEKALGLFE-KMGSGDCLPNLDTY 408
Query: 425 GRL 427
L
Sbjct: 409 NIL 411
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 186/436 (42%), Gaps = 44/436 (10%)
Query: 122 PHNELSETEIDPTVKKQHRKTESQLFKAI--ISSPGVSVQSALEKWVEKGKELNRPEISL 179
P N ++ + V K TE ++ I SS GVS S W+ +
Sbjct: 219 PPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV---WLTR----------- 264
Query: 180 AFVN-LRKRKMYGRALQLLQWLEKNKKLEFAEKDYASVLDLIAKVSGLFRAENYIKKVPE 238
F++ L K A +L L KNK + ++L + + + R + + K+ E
Sbjct: 265 -FISSLCKNARANAAWDILSDLMKNKT-PLEAPPFNALLSCLGRNMDISRMNDLVLKMDE 322
Query: 239 -SFRGELLYRTLLANYASQNN-LKKTEETFNKMRDLD------LPITAFACNQLLLIYKK 290
R +++ +L N ++ + + E F KMR + + N L+ K
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 291 VDKKKISDVLLLMEK--ENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPN-- 346
V + K ++ LL+ K E P+ TY LID ++ + +++V MK + I+PN
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 347 --HQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERI 404
+ + + R++ GL A ++E E ++ N+ TL+ ++ ++
Sbjct: 443 TVNTIVGGMCRHH---GLN-MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA-MY 497
Query: 405 W--KVVES--KPGIDVCLAAVEAWGRLQK-XXXXXXXXXXXXNKWKLSSKNYSVLLKVYA 459
W K++E+ P + A + ++++ + L Y++L+ ++
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 460 NHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMF 519
+ +K +++ M + G K +T+++L+ + + + E + ++++ M + + P
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ-MREDGLDPTV 616
Query: 520 NTYMAVMEQYAKRGDV 535
TY AV++ Y G++
Sbjct: 617 TTYGAVIDAYCSVGEL 632
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 268 KMRDLDLPITAFACNQLL-LIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSN 326
K+++ + A N L+ L K + +K+ ++L MEKE KP TY LI G+
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 327 DIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEI 373
D +E+++E M+ +G++P A+ Y S G ++A + +++
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 37/272 (13%)
Query: 244 LLYRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLLM 303
+ Y T++ N K E F +M L + +L +Y K K+ +VL L
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSK--SGKVEEVLSLY 279
Query: 304 EKENV---KPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSA 360
E+ KP + +L G++ D G+ +++ MK+ ++PN V L A
Sbjct: 280 ERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 361 GLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAA 420
G A ++ E+ L N L+++Y A + ++W+ +++K
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK--------- 390
Query: 421 VEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGEN-GC 479
KW + Y+ LL + A+ + ++ + L M E+ C
Sbjct: 391 ----------------------KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQC 428
Query: 480 KIGPLTWDSLVKLYTQAGEVEKADAVLQKVME 511
+ ++ +++ +Y G+ EKA + +++++
Sbjct: 429 RPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 268 KMRDLDLPITAFACNQLL-LIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSN 326
K+++ + A N L+ L K + +K+ ++L MEKE KP TY LI G+
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 327 DIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEI 373
D +E+++E M+ +G++P A+ Y S G ++A + +++
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/326 (18%), Positives = 132/326 (40%), Gaps = 35/326 (10%)
Query: 213 YASVLDLIAKVSGLFRAENYIKKVPESFR---GELLYRTLLANYASQNNLKKTEETFNKM 269
+ +++D + KV L AE + ++ R + Y L+ Y L+ +E ++M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 270 RDLDLPITAFACNQLLLIYKKVDKKKISDVLLL-MEKENVKPSHFTYKILIDTKGQSNDI 328
++ ++ N ++ + ++ V + MEKE VK + TY LI +++
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 329 AGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLRDNLWVCPTL 388
E M G P+ ++ AL A ++++++ +L L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 389 LRLYANLGKADEVERIWKVVESKPGIDVCLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSS 448
+ L+ + A++V + L +E G+ K S
Sbjct: 553 IGLFCDKNNAEKVYEM-------------LTDMEKEGK------------------KPDS 581
Query: 449 KNYSVLLKVYANHKMLKKGKDLIQRMGENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQK 508
Y+ L+ + HK + + ++++M E+G T+ +++ Y GE+++A + +
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 509 VMEQSRMTPMFNTYMAVMEQYAKRGD 534
+ S++ P Y ++ ++K G+
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGN 667
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 268 KMRDLDLPITAFACNQLL-LIYKKVDKKKISDVLLLMEKENVKPSHFTYKILIDTKGQSN 326
K+++ + A N L+ L K + +K+ ++L MEKE KP TY LI G+
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 327 DIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEI 373
D +E+++E M+ +G++P A+ Y S G ++A + +++
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
M+ + ++P FTY LI + +++ M I PN +L + G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 363 KEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVE 422
+AE + E+ ++ N+ +L+ + + DE ++I+ ++ SK CL V
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD----CLPDVV 381
Query: 423 AWGRLQKXXXXXXXXXXXXNKWKLSSK--------NYSVLLKVYANHKMLKKGKDLIQRM 474
+ L ++ S+ Y+ L+ + + + ++M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 475 GENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGD 534
+G +T+++L+ + G++EKA V + +++S+M P TY + E K G
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 535 VHN 537
V +
Sbjct: 501 VED 503
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 264 ETFNKMRDLDLPITAFACNQLLLIYKKVDKK-KISDVLLLMEKEN---VKPSHFTYKILI 319
ET KMR L P + L +I + K K+ + L ++ K N + PS TY L+
Sbjct: 535 ETLVKMRILTTP------HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 320 DTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGLKEKAEAILQEIEGENLR 379
D +S DI G +I+E MK G PN + G E+AE +L ++ +
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 380 DNLWVCPTLLRLYANLGKADE-VERIWKVVE 409
N +++ Y N GK D +E + +VE
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
M+ ++V PS FTY ILID ++N + ++E M +G P +L A
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 363 KEKAEAILQEIEGENLRD-NLWVCPTLLRLYANLGKADEVERIWKVVESK-PGIDV---- 416
E A + +E++ EN + + V +++ + GK E ++ ++++ G DV
Sbjct: 460 YEAANELFKELK-ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 417 -CLAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMG 475
++ + G + + + ++S N ++L +A + ++ ++ + +
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHN--IILNGFARTGVPRRAIEMFETIK 576
Query: 476 ENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKV 509
+G K +T+++L+ + AG E+A +++++
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 121/298 (40%), Gaps = 50/298 (16%)
Query: 246 YRTLLANYASQNNLKKTEETFNKMRDLDLPITAFACNQLLLIYKKVDKKKISDVLLL--- 302
+ L++ YA +K E+F +M++ D F N +I + + ++++ +L
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYN---VILRVMMREEVFFMLAFAVY 186
Query: 303 --MEKENVKPSHFTYKILID---TKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYY 357
M K N P+ +T+ IL+D KG+++D +++ + M GI PN L
Sbjct: 187 NEMLKCNCSPNLYTFGILMDGLYKKGRTSD---AQKMFDDMTGRGISPNRVTYTILISGL 243
Query: 358 TSAGLKEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVC 417
G + A + E++ + LL + LG+ E + ++ E D
Sbjct: 244 CQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK----DGF 299
Query: 418 LAAVEAWGRLQKXXXXXXXXXXXXNKWKLSSKNYSVLLKVYANHKMLKKGKDLIQRMGEN 477
+ + + L ++ Y+ ++YAN MLKK
Sbjct: 300 VLGLRGYSSLIDGL--------------FRARRYTQAFELYAN--MLKK----------- 332
Query: 478 GCKIGP--LTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRG 533
I P + + L++ ++AG++E A +L M ++P Y AV++ RG
Sbjct: 333 --NIKPDIILYTILIQGLSKAGKIEDALKLLSS-MPSKGISPDTYCYNAVIKALCGRG 387
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 102/244 (41%), Gaps = 13/244 (5%)
Query: 303 MEKENVKPSHFTYKILIDTKGQSNDIAGMEQIVETMKAEGIEPNHQVQAALARYYTSAGL 362
ME + V+P+ TY LI + +++ M I PN AL + G
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 363 KEKAEAILQEIEGENLRDNLWVCPTLLRLYANLGKADEVERIWKVVESKPGIDVCLAAVE 422
+AE + E+ ++ +++ +L+ + + DE + +++++ SK C V
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVV 401
Query: 423 AWGRLQKXXXXXXXXXXXXNKWKLSSK--------NYSVLLKVYANHKMLKKGKDLIQRM 474
+ L ++ S+ Y+ L+ + + + + ++M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 475 GENGCKIGPLTWDSLVKLYTQAGEVEKADAVLQKVMEQSRMTPMFNTYMAVMEQYAKRGD 534
+G +T+++L+ + G++EKA V + +++S+M P TY ++E K G
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 535 VHNS 538
V +
Sbjct: 521 VEDG 524