Miyakogusa Predicted Gene
- Lj1g3v0652040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0652040.1 tr|B9GUI6|B9GUI6_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_710171
PE=4,79.57,0,AMINOTRANSFERASE RELATED,Diaminopimelate
aminotransferase, DapL, plant/Chlamydia-type; SUBGROUP I
AM,CUFF.26117.1
(186 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13810.1 | Symbols: ALD1 | AGD2-like defense response protein... 297 3e-81
AT4G33680.1 | Symbols: AGD2 | Pyridoxal phosphate (PLP)-dependen... 290 5e-79
AT1G77670.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent tr... 57 7e-09
AT2G22250.3 | Symbols: ATAAT, AAT, MEE17 | aspartate aminotransf... 55 2e-08
AT2G22250.2 | Symbols: ATAAT, AAT, MEE17 | aspartate aminotransf... 55 2e-08
AT2G22250.1 | Symbols: ATAAT, AAT, MEE17 | aspartate aminotransf... 55 2e-08
AT1G80360.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent tr... 55 3e-08
>AT2G13810.1 | Symbols: ALD1 | AGD2-like defense response protein 1
| chr2:5768489-5772138 FORWARD LENGTH=456
Length = 456
Score = 297 bits (760), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 136/186 (73%), Positives = 159/186 (85%)
Query: 1 MKCGPENNFFPDLSTTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAY 60
M CGP N+FFPDL+ TPR DVIFFCSPNNPTG ASR+QL QLV+FAK NGS+II+DSAY
Sbjct: 195 MPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAY 254
Query: 61 SAYISDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKDY 120
+A+I D SPRSIYEIPGAREVAIE+SSFSKFAGFTGVRLGW+++P+EL Y+NG+ ++ D+
Sbjct: 255 AAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDF 314
Query: 121 DRIVCTSFNGASNIVQAGGLACLSPEGFKALKSTINHYMENAKILVDTFESLGLKVYGGR 180
RIV TSFNGASNI QAGGLACLS G K ++S N+Y EN KIL+DT SLGLKVYGG
Sbjct: 315 HRIVTTSFNGASNIAQAGGLACLSSGGLKEIRSVNNYYKENRKILMDTLVSLGLKVYGGV 374
Query: 181 NAPYIW 186
NAPY+W
Sbjct: 375 NAPYLW 380
>AT4G33680.1 | Symbols: AGD2 | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein |
chr4:16171847-16174630 REVERSE LENGTH=461
Length = 461
Score = 290 bits (741), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 158/186 (84%)
Query: 1 MKCGPENNFFPDLSTTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAY 60
M+C PEN FFPDLST R D+IFFCSPNNPTG+AA+R+QL QLVEFAK NGS+I+YDSAY
Sbjct: 216 MRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 275
Query: 61 SAYISDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKDY 120
+ Y+SD++PRSI+EIPGA EVA+E +SFSK+AGFTGVRLGWTV+P++L Y++G+ V KD+
Sbjct: 276 AMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF 335
Query: 121 DRIVCTSFNGASNIVQAGGLACLSPEGFKALKSTINHYMENAKILVDTFESLGLKVYGGR 180
+RI+CT FNGASNI QAG LACL+PEG +A+ I Y EN I++DTF SLG VYGG+
Sbjct: 336 NRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGK 395
Query: 181 NAPYIW 186
NAPY+W
Sbjct: 396 NAPYVW 401
>AT1G77670.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein |
chr1:29189043-29190901 REVERSE LENGTH=440
Length = 440
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 21/170 (12%)
Query: 14 STTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSMIIYDSAYSAYISDESPRSIY 73
+ T + I +P+NPTG +R++L+ + N ++ D Y + SI
Sbjct: 208 AVTNKTRAILMNTPHNPTGKMFTREELETIASLCIENDVLVFSDEVYDKLAFEMDHISIA 267
Query: 74 EIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEEL----RYANGYSVLKDYDRIVCTSFN 129
+PG E + ++S K TG ++GW + P L R A+ Y
Sbjct: 268 SLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSYLTF------------ 315
Query: 130 GASNIVQAGGLACL-SPEG-FKALKSTINHYMENAKILVDTFESLGLKVY 177
S Q +A L +PE FK LK N E LV + +G V+
Sbjct: 316 ATSTPAQWAAVAALKAPESYFKELKRDYNVKKET---LVKGLKEVGFTVF 362
>AT2G22250.3 | Symbols: ATAAT, AAT, MEE17 | aspartate
aminotransferase | chr2:9458011-9460297 REVERSE
LENGTH=475
Length = 475
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 7 NNFF---PDLST--TPRVDVIFFCSPNNPTGSAASRQQLKQLVE-FAKANGSMIIYDSAY 60
NNF DL + T + ++ CSP+NPTGS + L+++ AK +++ D Y
Sbjct: 216 NNFLLDPKDLESKLTEKSRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVLSDEIY 275
Query: 61 SAYI-SDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKD 119
I + + S +P E + ++ FSK TG RLG+ P+ + A
Sbjct: 276 EHIIYAPATHTSFASLPDMYERTLTVNGFSKAFAMTGWRLGYLAGPKHIVAA-------- 327
Query: 120 YDRIVCTSFNGASNIVQAGGLAC--LSPEGFKALKSTINHYMENAKILVDTFESL-GLKV 176
++ +GAS+I Q G+A L G + + + Y E LV + + G+K+
Sbjct: 328 CSKLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKI 387
Query: 177 YGGRNAPYIW 186
+ A Y++
Sbjct: 388 SEPQGAFYLF 397
>AT2G22250.2 | Symbols: ATAAT, AAT, MEE17 | aspartate
aminotransferase | chr2:9458011-9460297 REVERSE
LENGTH=475
Length = 475
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 7 NNFF---PDLST--TPRVDVIFFCSPNNPTGSAASRQQLKQLVE-FAKANGSMIIYDSAY 60
NNF DL + T + ++ CSP+NPTGS + L+++ AK +++ D Y
Sbjct: 216 NNFLLDPKDLESKLTEKSRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVLSDEIY 275
Query: 61 SAYI-SDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKD 119
I + + S +P E + ++ FSK TG RLG+ P+ + A
Sbjct: 276 EHIIYAPATHTSFASLPDMYERTLTVNGFSKAFAMTGWRLGYLAGPKHIVAA-------- 327
Query: 120 YDRIVCTSFNGASNIVQAGGLAC--LSPEGFKALKSTINHYMENAKILVDTFESL-GLKV 176
++ +GAS+I Q G+A L G + + + Y E LV + + G+K+
Sbjct: 328 CSKLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKI 387
Query: 177 YGGRNAPYIW 186
+ A Y++
Sbjct: 388 SEPQGAFYLF 397
>AT2G22250.1 | Symbols: ATAAT, AAT, MEE17 | aspartate
aminotransferase | chr2:9458011-9460028 REVERSE
LENGTH=428
Length = 428
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 7 NNFF---PDLST--TPRVDVIFFCSPNNPTGSAASRQQLKQLVE-FAKANGSMIIYDSAY 60
NNF DL + T + ++ CSP+NPTGS + L+++ AK +++ D Y
Sbjct: 169 NNFLLDPKDLESKLTEKSRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVLSDEIY 228
Query: 61 SAYI-SDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYSVLKD 119
I + + S +P E + ++ FSK TG RLG+ P+ + A
Sbjct: 229 EHIIYAPATHTSFASLPDMYERTLTVNGFSKAFAMTGWRLGYLAGPKHIVAA-------- 280
Query: 120 YDRIVCTSFNGASNIVQAGGLAC--LSPEGFKALKSTINHYMENAKILVDTFESL-GLKV 176
++ +GAS+I Q G+A L G + + + Y E LV + + G+K+
Sbjct: 281 CSKLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKI 340
Query: 177 YGGRNAPYIW 186
+ A Y++
Sbjct: 341 SEPQGAFYLF 350
>AT1G80360.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein |
chr1:30208736-30210643 REVERSE LENGTH=394
Length = 394
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 25/195 (12%)
Query: 4 GPENNFFPDLS--------TTPRVDVIFFCSPNNPTGSAASRQQLKQLVEFAKANGSMII 55
G + +PD + P V+ +P NP+G+ LK++ + K G +I
Sbjct: 143 GQSDTLYPDADWLERTLSESKPTPKVVTVVNPGNPSGTYVPEPLLKRIAQICKDAGCWLI 202
Query: 56 YDSAYSAYISDESPRSIYEIPGAREVAIEISSFSKFAGFTGVRLGWTVVPEELRYANGYS 115
D+ Y ++ D E + + + SFSK G G RLG+ E L +G++
Sbjct: 203 VDNTYEYFMYDGLKHCCVE----GDHIVNVFSFSKTYGMMGWRLGYIAYSERL---DGFA 255
Query: 116 --VLKDYDRI-VCTSFNGASNIVQAGGLACLSPEGFKALKSTINHYMENAKILVDTFESL 172
++K D I +C A+ I Q + L EG + + ++N I+ + E L
Sbjct: 256 TELVKIQDNIPIC-----AAIISQRLAVYALE-EGSGWITERVKSLVKNRDIVKEALEPL 309
Query: 173 GLK-VYGGRNAPYIW 186
G + V GG A Y+W
Sbjct: 310 GKENVKGGEGAIYLW 324