Miyakogusa Predicted Gene

Lj1g3v0579720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0579720.1 Non Chatacterized Hit- tr|B9RLH0|B9RLH0_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.67,0.000000000001,seg,NULL,CUFF.25996.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60840.1 | Symbols:  | unknown protein; Has 361 Blast hits to...    52   2e-07

>AT5G60840.1 | Symbols:  | unknown protein; Has 361 Blast hits to
           333 proteins in 92 species: Archae - 2; Bacteria - 55;
           Metazoa - 145; Fungi - 36; Plants - 42; Viruses - 19;
           Other Eukaryotes - 62 (source: NCBI BLink). |
           chr5:24473442-24474423 REVERSE LENGTH=207
          Length = 207

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 57  HLDGTRYIERFSKYDDEYRRRLLEKYFSGKINGGNIIYEQITVRGEIIKTSRLPCLRSYA 116
           +LD   Y E++  Y+ ++R+ L++K+FS      +   E  T+ GE I +S LPC R YA
Sbjct: 70  YLDSEEYAEKYRSYEADFRKYLMDKHFSEV----DEYEETTTIDGETIFSSVLPCARWYA 125

Query: 117 DPVVGFED 124
           DP   F D
Sbjct: 126 DPDASFVD 133