Miyakogusa Predicted Gene
- Lj1g3v0579610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0579610.1 Non Chatacterized Hit- tr|D5AD86|D5AD86_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,23.17,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; DYW_de,CUFF.25988.1
(607 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 752 0.0
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 482 e-136
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 463 e-130
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 455 e-128
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 454 e-127
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 453 e-127
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 440 e-123
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-121
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 428 e-120
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 426 e-119
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 422 e-118
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-115
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 411 e-115
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 410 e-114
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 407 e-114
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 407 e-113
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 406 e-113
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 405 e-113
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 394 e-109
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 389 e-108
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 389 e-108
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 379 e-105
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 378 e-105
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 369 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-101
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 362 e-100
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 359 3e-99
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 4e-99
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 6e-99
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 6e-99
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 357 1e-98
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 5e-98
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 5e-98
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 355 5e-98
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 4e-97
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 350 2e-96
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 348 7e-96
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 347 1e-95
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 7e-95
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 8e-93
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 336 2e-92
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 7e-92
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 5e-91
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 323 2e-88
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 320 1e-87
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 8e-85
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 3e-84
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 7e-84
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 6e-81
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 1e-79
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 5e-79
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 291 7e-79
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 291 1e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 6e-76
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 4e-75
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 5e-75
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 5e-73
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 6e-73
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 7e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 256 3e-68
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 255 5e-68
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 247 2e-65
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 246 4e-65
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 7e-64
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 235 5e-62
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 1e-61
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 234 1e-61
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 9e-60
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 8e-59
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 223 4e-58
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 1e-57
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 217 2e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 6e-56
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 1e-53
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 7e-52
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 199 7e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 7e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 2e-48
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 8e-48
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 5e-47
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 6e-45
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 6e-45
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 8e-41
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 1e-36
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 2e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 84 2e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 79 1e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 77 3e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 77 3e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 4e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 76 6e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 9e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 2e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 70 4e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 68 2e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 5e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 9e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 6e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 57 4e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 5e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 5e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 56 7e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 52 1e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/581 (61%), Positives = 447/581 (76%), Gaps = 11/581 (1%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNT 94
MS LKQ+HA TLRT P LFLY +IL SS +D+NYA R+F +SFMWNT
Sbjct: 61 MSQLKQLHAFTLRTT-YPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 95 LIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
LIRA A + K +A LY+ M+ E PD +TFPFVLKACA+ F EGKQVH Q+
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESS--PDKHTFPFVLKACAYIFGFSEGKQVHCQI 177
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+K G+ D + N LIH Y +CGCLD+A K+F M E+S VSWN M+D+ VR GE+D+AL
Sbjct: 178 VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSAL 237
Query: 215 KVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
++F EM + +PDGYTMQSV+SACAGLG+LSLG WAHA++++KCD +VA DVLV L++
Sbjct: 238 QLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 275 MYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV-KIEKFVPNS 333
MYCKCGSL +A+QVF+ M RD+ SWN++ILGF+ HG+AE A+++F RMV K E PNS
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+TFVG+L ACNHRG VN+G YFDMM ++Y +EP LEHYGC+VDL ARAG I EA+++V
Sbjct: 358 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 394 EMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVF------EIEGSVCSGAYVLLSKLY 447
MP+KPDAVIWRSLLDACCK+ ASVEL EE+A+ + E CSGAYVLLS++Y
Sbjct: 418 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 477
Query: 448 ASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEID 507
ASASRWN+VG++RKLMS+ G+ K+PGCS IEI+G++HEFFAGDT+HP+++ IY+ L ID
Sbjct: 478 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 537
Query: 508 EKLESMGYLPDYSGAHLVDETIDGKKS-TLRLHSERLAIAFGLLNSRPGMPIRVFKNLRV 566
++L S+GYLPD S A LVD T DG K +LRLHSERLAIAFGL+N P PIR+FKNLRV
Sbjct: 538 DRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRV 597
Query: 567 CSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
C+DCH+VTKLIS ++N EIIVRDR RFHHFKDG+CSC+DYW
Sbjct: 598 CNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/562 (44%), Positives = 358/562 (63%), Gaps = 11/562 (1%)
Query: 47 RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHK 106
+ D + H + + Y+ ++ Y+S + A +LF + WN +I YA + N+K
Sbjct: 190 KVFDKSPH-RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 107 HQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRIC 166
+A+EL+K MM + V PD T V+ ACA + S+ G+QVH + G+ S+ +I
Sbjct: 249 -EALELFKDMM---KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD- 225
N+LI Y+ CG L+ A +F+ + K +SWN ++ Y + AL +F EML+ +
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 226 PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
P+ TM S++ ACA LGA+ +G W H Y+ K+ K V + T L+DMY KCG +E A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL-KGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 286 QQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH 345
QVF + ++ ++SWN++I GF+MHG+A+A+ D F RM KI P+ ITFVG+LSAC+H
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI-GIQPDDITFVGLLSACSH 482
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR 405
GM++ G F MT++Y + P+LEHYGC++DL +G +EA +++ M ++PD VIW
Sbjct: 483 SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWC 542
Query: 406 SLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSD 465
SLL AC K +VELGE A+ + +IE G+YVLLS +YASA RWNEV R L++D
Sbjct: 543 SLLKAC-KMHGNVELGESFAENLIKIEPE-NPGSYVLLSNIYASAGRWNEVAKTRALLND 600
Query: 466 KGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLV 525
KG+ K PGCS IEID V HEF GD HP++ +IY L E++ LE G++PD S L
Sbjct: 601 KGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV-LQ 659
Query: 526 DETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEI 585
+ + K+ LR HSE+LAIAFGL++++PG + + KNLRVC +CH+ TKLIS IY EI
Sbjct: 660 EMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREI 719
Query: 586 IVRDRARFHHFKDGTCSCMDYW 607
I RDR RFHHF+DG CSC DYW
Sbjct: 720 IARDRTRFHHFRDGVCSCNDYW 741
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 219/432 (50%), Gaps = 52/432 (12%)
Query: 34 TMSHLKQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
T+ L+ IHAQ ++ + TN+ + + IL + L YA +F +PN +W
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPH--FEGLPYAISVFKTIQEPNLLIW 102
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
NT+ R +A S++ A++LY M+ + ++P+ YTFPFVLK+CA + + EG+Q+H
Sbjct: 103 NTMFRGHALSSD-PVSALKLYVCMISL---GLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158
Query: 153 QLLKLGYESDTRICNSLIHF-------------------------------YATCGCLDM 181
+LKLG + D + SLI YA+ G ++
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAG 240
A K+F + K VSWN M+ Y G + AL++F +M+K + PD TM +V+SACA
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
G++ LG H ++ D +++ + L+D+Y KCG LE A +FER+PY+DV SW
Sbjct: 279 SGSIELGRQVHLWID---DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL---MYFD 357
N++I G++ + AL F M++ + PN +T + +L AC H G ++ G +Y D
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC---KQ 414
K L L+D++A+ G I+ A + + + + W +++ +
Sbjct: 395 KRLKGVTNASSLR--TSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRA 451
Query: 415 DASVELGEEMAK 426
DAS +L M K
Sbjct: 452 DASFDLFSRMRK 463
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/582 (41%), Positives = 364/582 (62%), Gaps = 17/582 (2%)
Query: 31 GIITMSHLKQIHAQTLR---TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKP 87
G+ +++ L+QIHA ++R +I + L Y L S ++YA ++F KP
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFY---LVSLPSPPPMSYAHKVFSKIEKP 82
Query: 88 -NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
N F+WNTLIR YA N A LY+ M + V PD +T+PF++KA +
Sbjct: 83 INVFIWNTLIRGYAEIGN-SISAFSLYREMRV--SGLVEPDTHTYPFLIKAVTTMADVRL 139
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
G+ +H+ +++ G+ S + NSL+H YA CG + A K+F M EK V+WN +++ +
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 207 AGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
G+ + AL ++ EM K PDG+T+ S++SACA +GAL+LG H Y++K + +
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV---GLTRN 256
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
+ + L+D+Y +CG +E A+ +F+ M ++ SW S+I+G +++G + A++ F M
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
E +P ITFVG+L AC+H GMV EG YF M +EY +EPR+EH+GC+VDL ARAG++
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSK 445
++A + MP++P+ VIWR+LL AC S +L E Q+ ++E + SG YVLLS
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS-DLAEFARIQILQLEPN-HSGDYVLLSN 434
Query: 446 LYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNE 505
+YAS RW++V +RK M GV K PG SL+E+ HEF GD +HP+S+ IY L E
Sbjct: 435 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
Query: 506 IDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLR 565
+ +L S GY+P S + VD + K++ + HSE++AIAF L+++ PI V KNLR
Sbjct: 495 MTGRLRSEGYVPQISNVY-VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 553
Query: 566 VCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
VC+DCH KL+S +YN EI+VRDR+RFHHFK+G+CSC DYW
Sbjct: 554 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/625 (40%), Positives = 360/625 (57%), Gaps = 64/625 (10%)
Query: 34 TMSHLKQIHAQTLRT---IDTTNHPQAL-FLYSRILHYYSSLADLNYATRLFHHFGKPNS 89
T+ L QIHA +++ DT + L F + LH+ DL+YA ++F+ + N
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHH----RDLDYAHKIFNQMPQRNC 90
Query: 90 FMWNTLIRAYARSANHKHQ-AIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGK 148
F WNT+IR ++ S K AI L+ MM +E V P+ +TFP VLKACA T + EGK
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMM--SDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 149 QVHAQLLKLGYESDTRICNSLIHFYATCGCL--------------DM------------- 181
Q+H LK G+ D + ++L+ Y CG + DM
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 182 ------------------ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
A +F M ++S VSWN M+ Y G F A++VF EM K
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 224 H-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
P+ T+ SV+ A + LG+L LG W H Y D + D ++ + L+DMY KCG +
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAE---DSGIRIDDVLGSALIDMYSKCGII 325
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
E A VFER+P +V +W+++I GF++HG+A A+D F +M + P+ + ++ +L+A
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVAYINLLTA 384
Query: 343 CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAV 402
C+H G+V EG YF M +EPR+EHYGC+VDL R+G + EA + MPIKPD V
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 403 IWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKL 462
IW++LL AC + +VE+G+ +A + ++ SGAYV LS +YAS W+EV +R
Sbjct: 445 IWKALLGAC-RMQGNVEMGKRVANILMDMVPHD-SGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 463 MSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA 522
M +K + K PGCSLI+IDGV HEF D +HPK+++I L EI +KL GY P +
Sbjct: 503 MKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQV 562
Query: 523 HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYN 582
L E D K++ L HSE++A AFGL+++ PG PIR+ KNLR+C DCH KLIS +Y
Sbjct: 563 LLNLEEED-KENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYK 621
Query: 583 VEIIVRDRARFHHFKDGTCSCMDYW 607
+I VRDR RFHHF+DG+CSCMDYW
Sbjct: 622 RKITVRDRKRFHHFQDGSCSCMDYW 646
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/607 (39%), Positives = 360/607 (59%), Gaps = 53/607 (8%)
Query: 38 LKQIHAQTLRTIDTTNHPQALFLYSRILHY--YSSLAD-LNYATRLFHHFGKPNSFMWNT 94
LKQIHA+ L+T Q + ++ L + S+ +D L YA +F F +P++F+WN
Sbjct: 30 LKQIHARMLKT----GLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNL 85
Query: 95 LIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
+IR ++ S + +++ LY+ M+ + YTFP +LKAC++ + E Q+HAQ+
Sbjct: 86 MIRGFSCS-DEPERSLLLYQRMLC---SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQI 141
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
KLGYE+D NSLI+ YA G +A +F + E +VSWN ++ YV+AG+ D AL
Sbjct: 142 TKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIAL 201
Query: 215 KVFGEMLKLH--------------------------------DPDGYTMQSVISACAGLG 242
+F +M + + +PD ++ + +SACA LG
Sbjct: 202 TLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
AL G W H+Y+ K + D ++ L+DMY KCG +E A +VF+ + + V +W +
Sbjct: 262 ALEQGKWIHSYLNKT---RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
+I G++ HG A+ F M K+ PN ITF VL+AC++ G+V EG + F M ++
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKM-GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGE 422
YN++P +EHYGC+VDL RAG + EA + EMP+KP+AVIW +LL AC + ++ELGE
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC-RIHKNIELGE 436
Query: 423 EMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGV 482
E+ + + I+ G YV + ++A +W++ R+LM ++GV K PGCS I ++G
Sbjct: 437 EIGEILIAID-PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 483 AHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA--HLVDETIDGKKSTLRLHS 540
HEF AGD +HP+ E I + KLE GY+P+ LVD+ D +++ + HS
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDD--DEREAIVHQHS 553
Query: 541 ERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGT 600
E+LAI +GL+ ++PG IR+ KNLRVC DCHKVTKLIS IY +I++RDR RFHHF+DG
Sbjct: 554 EKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGK 613
Query: 601 CSCMDYW 607
CSC DYW
Sbjct: 614 CSCGDYW 620
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 43/301 (14%)
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM---ALKIFQNMSEKSEVSWNVMVD 202
E KQ+HA++LK G D+ + F + D A +F WN+M+
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 203 SYVRAGEFDTALKVFGEMLKLHDP-DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
+ + E + +L ++ ML P + YT S++ AC+ L A HA + K +N
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFF 321
DV L++ Y G+ ++A +F+R+P D SWNS+I G+ GK + AL F
Sbjct: 149 ---DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 322 RMVK---------IEKFV---------------------PNSITFVGVLSACNHRGMVNE 351
+M + I +V P++++ LSAC G + +
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 352 GLMYFDMMTKEYNVEPRLEH-YGC-LVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLD 409
G + K R++ GC L+D++A+ G ++EAL + + K W +L+
Sbjct: 266 GKWIHSYLNK---TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALIS 321
Query: 410 A 410
Sbjct: 322 G 322
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/578 (39%), Positives = 361/578 (62%), Gaps = 19/578 (3%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYS---SLADLNYATRLFHHFGKPNSF 90
++ L QI A +++ H + + ++++++ + + + ++YA LF +P+
Sbjct: 41 SLRELMQIQAYAIKS-----HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIV 95
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
++N++ R Y+R N +E++ + ++E+ ++PD+YTFP +LKACA +L EG+Q+
Sbjct: 96 IFNSMARGYSRFTN----PLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H +KLG + + +C +LI+ Y C +D A +F + E V +N M+ Y R
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 211 DTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN 269
+ AL +F EM K P+ T+ SV+S+CA LG+L LG W H Y K + V VN
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH---SFCKYVKVN 268
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
T L+DM+ KCGSL+ A +FE+M Y+D +W+++I+ ++ HGKAE ++ F RM + E
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM-RSENV 327
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
P+ ITF+G+L+AC+H G V EG YF M ++ + P ++HYG +VDL +RAG +++A
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
+ ++PI P ++WR LL AC + +++L E++++++FE++ S G YV+LS LYA
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHN-NLDLAEKVSERIFELDDSH-GGDYVILSNLYAR 445
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEK 509
+W V LRK+M D+ K PGCS IE++ V HEFF+GD + +++ L+E+ ++
Sbjct: 446 NKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKE 505
Query: 510 LESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSD 569
L+ GY+PD S + K+ TLR HSE+LAI FGLLN+ PG IRV KNLRVC D
Sbjct: 506 LKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRD 565
Query: 570 CHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
CH KLIS I+ ++++RD RFHHF+DG CSC D+W
Sbjct: 566 CHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/578 (39%), Positives = 341/578 (58%), Gaps = 52/578 (8%)
Query: 72 ADLNYATRLFH--HFGKPNSFMWNTLIRAYAR--SANHKHQAIELYKAMMLMMEEEVVPD 127
A + YA +FH H K SF+WN +IRA S+ +H I +Y + M V PD
Sbjct: 6 AIIAYANPIFHIRHL-KLESFLWNIIIRAIVHNVSSPQRHSPISVY---LRMRNHRVSPD 61
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
+TFPF+L + + L G++ HAQ+L G + D + SL++ Y++CG L A ++F
Sbjct: 62 FHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD 121
Query: 188 NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH----------------------- 224
+ K +WN +V++Y +AG D A K+F EM + +
Sbjct: 122 DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 181
Query: 225 --------------DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
P+ +TM +V+SAC LGAL G W HAY+ K +V D+++ T
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY---HVEIDIVLGT 238
Query: 271 CLVDMYCKCGSLEIAQQVFERM-PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
L+DMY KCGSLE A++VF + +DV +++++I +M+G + F M +
Sbjct: 239 ALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNI 298
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
PNS+TFVG+L AC HRG++NEG YF MM +E+ + P ++HYGC+VDL+ R+G I+EA
Sbjct: 299 NPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAE 358
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
+ ++ MP++PD +IW SLL + ++ E K++ E++ + SGAYVLLS +YA
Sbjct: 359 SFIASMPMEPDVLIWGSLLSG-SRMLGDIKTCEGALKRLIELD-PMNSGAYVLLSNVYAK 416
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEK 509
RW EV +R M KG+ K PGCS +E++GV HEF GD + +SE IY L+EI ++
Sbjct: 417 TGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQR 476
Query: 510 LESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSD 569
L GY+ D L+D K+ L HSE+LAIAF L+ +RPG P+R+ KNLR+C D
Sbjct: 477 LREAGYVTDTKEV-LLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGD 535
Query: 570 CHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
CH V K+IS +++ EI+VRD RFHHF+DG+CSC D+W
Sbjct: 536 CHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 38/305 (12%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSA--------------- 103
F+ + +L+ YSS DL A R+F G + WN+++ AYA++
Sbjct: 98 FVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 104 ---------------NHKHQAIELYKAMMLMMEEE--VVPDHYTFPFVLKACAHTFSLCE 146
+A++L++ M L E V P+ +T VL AC +L +
Sbjct: 158 NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQ 217
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEV-SWNVMVDSYV 205
GK VHA + K E D + +LI YA CG L+ A ++F + K +V +++ M+
Sbjct: 218 GKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLA 277
Query: 206 RAGEFDTALKVFGEMLKLH--DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
G D ++F EM +P+ T ++ AC G ++ G + M + +
Sbjct: 278 MYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG--KSYFKMMIEEFGIT 335
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYFFR 322
+ C+VD+Y + G ++ A+ MP DV W S++ G M G + R
Sbjct: 336 PSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKR 395
Query: 323 MVKIE 327
+++++
Sbjct: 396 LIELD 400
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/601 (39%), Positives = 345/601 (57%), Gaps = 48/601 (7%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
QIHA LR + HP+ L ++ Y+S + ++ LFH P+ F++ I
Sbjct: 47 QIHAAILRH-NLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINT- 104
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
A K QA LY + ++ E+ P+ +TF +LK+C S GK +H +LK G
Sbjct: 105 ASINGLKDQAFLLY---VQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGL 157
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS----------------------- 196
D + L+ YA G + A K+F M E+S VS
Sbjct: 158 GIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDS 217
Query: 197 --------WNVMVDSYVRAGEFDTALKVFGEMLK--LHDPDGYTMQSVISACAGLGALSL 246
WNVM+D Y + G + AL +F ++L PD T+ + +SAC+ +GAL
Sbjct: 218 MCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALET 277
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILG 306
G W H +V + +V V T L+DMY KCGSLE A VF P +D+ +WN++I G
Sbjct: 278 GRWIHVFVK---SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAG 334
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVE 366
++MHG ++ AL F M I P ITF+G L AC H G+VNEG+ F+ M +EY ++
Sbjct: 335 YAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIK 394
Query: 367 PRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAK 426
P++EHYGCLV L RAG+++ A + M + D+V+W S+L + CK LG+E+A+
Sbjct: 395 PKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS-CKLHGDFVLGKEIAE 453
Query: 427 QVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEF 486
+ + SG YVLLS +YAS + V +R LM +KG+ K+PG S IEI+ HEF
Sbjct: 454 YLIGLNIK-NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 512
Query: 487 FAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIA 546
AGD H KS++IY L +I E+++S GY+P+ + L D K+ +L++HSERLAIA
Sbjct: 513 RAGDREHSKSKEIYTMLRKISERIKSHGYVPN-TNTVLQDLEETEKEQSLQVHSERLAIA 571
Query: 547 FGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDY 606
+GL++++PG P+++FKNLRVCSDCH VTKLIS I +I++RDR RFHHF DG+CSC D+
Sbjct: 572 YGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDF 631
Query: 607 W 607
W
Sbjct: 632 W 632
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 44/301 (14%)
Query: 143 SLCEGKQVHAQLLKLGYESDTR--ICNSLIH-FYATCGCLDMALKIFQNMSEKSEVSWNV 199
S+ E Q+HA +L+ R + N +H YA+ G + +L +F + +
Sbjct: 41 SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100
Query: 200 MVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKC 258
+++ G D A ++ ++L +P+ +T S++ +C+ G H +V+K
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKF- 155
Query: 259 DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----------------------- 295
+ D V T LVD+Y K G + AQ+VF+RMP R
Sbjct: 156 --GLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARA 213
Query: 296 --------DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
D+ SWN +I G++ HG AL F +++ K P+ IT V LSAC+ G
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 348 MVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSL 407
+ G + + K + ++ L+D++++ G ++EA+ + ++ P K D V W ++
Sbjct: 274 ALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAM 331
Query: 408 L 408
+
Sbjct: 332 I 332
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/612 (39%), Positives = 357/612 (58%), Gaps = 53/612 (8%)
Query: 33 ITMSHLKQIHAQTLRTIDTT---NHPQALFLYSRIL--HYYSSLADLNYATRLFHHFGKP 87
IT ++QIHA+ +D T +H F+ + L H Y L+YA ++ KP
Sbjct: 17 ITFKEVRQIHAKLY--VDGTLKDDHLVGHFVKAVALSDHKY-----LDYANQILDRSEKP 69
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEG 147
F N++IRA+ +S ++ + Y+ + L ++ PD+YT F+++AC G
Sbjct: 70 TLFALNSMIRAHCKSPV-PEKSFDFYRRI-LSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLD--------------------------- 180
QVH ++ G+++D + LI YA GCLD
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 181 ----MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVI 235
A K+F+ M E+ ++WN M+ Y + GE AL VF M L+ +G M SV+
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
SAC LGAL G WAH+Y+ + + V + T LVD+Y KCG +E A +VF M +
Sbjct: 248 SACTQLGALDQGRWAHSYIERN---KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
+V +W+S + G +M+G E L+ F ++K + PN++TFV VL C+ G V+EG +
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLE-LFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD 415
FD M E+ +EP+LEHYGCLVDL+ARAGR+++A++++ +MP+KP A +W SLL A +
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA-SRMY 422
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
++ELG +K++ E+E + GAYVLLS +YA ++ W+ V +R+ M KGV K+PGCS
Sbjct: 423 KNLELGVLASKKMLELE-TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Query: 476 LIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKST 535
++E++G HEFF GD +HPK I +I +L GY D + + D + K+
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPV-MFDIDEEEKEDA 540
Query: 536 LRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHH 595
L LHSE+ AIAFG+++ + +PIR+ KNLRVC DCH+V+ +IS I+N EIIVRDR RFHH
Sbjct: 541 LCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHH 600
Query: 596 FKDGTCSCMDYW 607
FKDG CSC +W
Sbjct: 601 FKDGHCSCNGFW 612
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/614 (39%), Positives = 357/614 (58%), Gaps = 55/614 (8%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRIL-------HYYSSLADLNYATRLFHHFGK 86
+ S LK IH LRT ++ +F+ SR+L + L YA +F
Sbjct: 24 SFSDLKIIHGFLLRTHLISD----VFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQN 79
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
PN F++N LIR ++ A +A Y M+ + + PD+ TFPF++KA + +
Sbjct: 80 PNLFVFNLLIRCFSTGAE-PSKAFGFYTQML---KSRIWPDNITFPFLIKASSEMECVLV 135
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
G+Q H+Q+++ G+++D + NSL+H YA CG + A +IF M + VSW MV Y +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 207 AGEFDTALKVFGEM---------------------------LKLHDPDGYT-----MQSV 234
G + A ++F EM + +G M SV
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
IS+CA LGAL G A+ YV+K ++ ++++ T LVDM+ +CG +E A VFE +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKS---HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
D SW+SII G ++HG A A+ YF +M+ + F+P +TF VLSAC+H G+V +GL
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL-GFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
++ M K++ +EPRLEHYGC+VD+ RAG++ EA N + +M +KP+A I +LL AC K
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC-KI 430
Query: 415 DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGC 474
+ E+ E + + +++ SG YVLLS +YA A +W+++ LR +M +K V K PG
Sbjct: 431 YKNTEVAERVGNMLIKVKPE-HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489
Query: 475 SLIEIDGVAHEFFAGD-TTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKK 533
SLIEIDG ++F GD HP+ I + EI K+ +GY + +G D + K+
Sbjct: 490 SLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGN-TGDAFFDVDEEEKE 548
Query: 534 STLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARF 593
S++ +HSE+LAIA+G++ ++PG IR+ KNLRVC DCH VTKLIS +Y E+IVRDR RF
Sbjct: 549 SSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRF 608
Query: 594 HHFKDGTCSCMDYW 607
HHF++G CSC DYW
Sbjct: 609 HHFRNGVCSCRDYW 622
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/577 (40%), Positives = 347/577 (60%), Gaps = 21/577 (3%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
KQ H Q + +F+ S ++ YS+ L A ++F K N W ++IR
Sbjct: 96 KQTHQQAF----VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 99 YARSANHKHQAIELYKAMMLMMEEE---VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
Y + N A+ L+K +++ ++ + D V+ AC+ + + +H+ ++
Sbjct: 152 YDLNGN-ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 156 KLGYESDTRICNSLIHFYATCG--CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
K G++ + N+L+ YA G + +A KIF + +K VS+N ++ Y ++G + A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 214 LKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
+VF ++K + + T+ +V+ A + GAL +G H V++ + DV+V T
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM---GLEDDVIVGTS 327
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
++DMYCKCG +E A++ F+RM ++V SW ++I G+ MHG A AL+ F M+ P
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRP 386
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
N ITFV VL+AC+H G+ EG +F+ M + VEP LEHYGC+VDL RAG +Q+A +L
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+ M +KPD++IW SLL A C+ +VEL E ++FE++ S C G Y+LLS +YA A
Sbjct: 447 IQRMKMKPDSIIWSSLL-AACRIHKNVELAEISVARLFELDSSNC-GYYMLLSHIYADAG 504
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
RW +V +R +M ++G+ K PG SL+E++G H F GD HP+ E IY+FL E++ KL
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 512 SMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDC 570
GY+ + S H VDE + K+ TLR+HSE+LAIAFG++N+ PG + V KNLRVCSDC
Sbjct: 565 EAGYVSNTSSVCHDVDE--EEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDC 622
Query: 571 HKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
H V KLIS I + E +VRD RFHHFKDG CSC DYW
Sbjct: 623 HNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 177/354 (50%), Gaps = 20/354 (5%)
Query: 56 QALFL-YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYK 114
+ALF SR+LH N T + K + F WN++I ARS + + E
Sbjct: 7 KALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGD----SAEALL 62
Query: 115 AMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA 174
A M + + P +FP +KAC+ F + GKQ H Q GY+SD + ++LI Y+
Sbjct: 63 AFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYS 122
Query: 175 TCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTM--- 231
TCG L+ A K+F + +++ VSW M+ Y G A+ +F ++L + D M
Sbjct: 123 TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 232 ----QSVISACAGLGALSLGMWAHAYVMKKC-DKNVAADVLVNTCLVDMYCKC--GSLEI 284
SVISAC+ + A L H++V+K+ D+ V+ V L+D Y K G + +
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS----VGNTLLDAYAKGGEGGVAV 238
Query: 285 AQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN 344
A+++F+++ +D S+NSI+ ++ G + A + F R+VK + N+IT VL A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 345 HRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
H G + G D + + +E + ++D++ + GR++ A M K
Sbjct: 299 HSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK 351
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/537 (40%), Positives = 335/537 (62%), Gaps = 15/537 (2%)
Query: 74 LNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPF 133
+NYA +F P +F +NT+IR Y + + +A+ Y MM E PD++T+P
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFE-EALCFYNEMMQRGNE---PDNFTYPC 137
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS 193
+LKAC S+ EGKQ+H Q+ KLG E+D + NSLI+ Y CG ++++ +F+ + K+
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 194 EVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAH 251
SW+ MV + G + L +F M + + M S + ACA GAL+LGM H
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 252 AYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHG 311
++++ + +++V T LVDMY KCG L+ A +F++M R+ +++++I G ++HG
Sbjct: 258 GFLLRNISE---LNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG 314
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH 371
+ E+AL F +M+K E P+ + +V VL+AC+H G+V EG F M KE VEP EH
Sbjct: 315 EGESALRMFSKMIK-EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 372 YGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEI 431
YGCLVDL RAG ++EAL + +PI+ + VIWR+ L C + ++ELG+ A+++ ++
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC-RVRQNIELGQIAAQELLKL 432
Query: 432 EGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDT 491
S G Y+L+S LY+ W++V R ++ KG+ + PG S++E+ G H F + D
Sbjct: 433 -SSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDR 491
Query: 492 THPKSEDIYKFLNEIDEKLESMGYLPDYSGAHL-VDETIDGKKSTLRLHSERLAIAFGLL 550
+HPK ++IYK L++++ +L+ GY PD + L VDE + KK L+ HS+++AIAFGLL
Sbjct: 492 SHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDE--EEKKERLKGHSQKVAIAFGLL 549
Query: 551 NSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
+ PG I++ +NLR+CSDCH TK IS IY EI+VRDR RFH FK GTCSC DYW
Sbjct: 550 YTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/584 (39%), Positives = 336/584 (57%), Gaps = 31/584 (5%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYY-SSLA------DLNYATRLFHHFGKPNS 89
HL+QIHA LRT +L S + H++ S LA D+NY+ R+F P
Sbjct: 26 HLRQIHALLLRT--------SLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTL 77
Query: 90 FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQ 149
NT+IRA++ S + L+++ L + + + F LK C + L G Q
Sbjct: 78 SHCNTMIRAFSLSQT-PCEGFRLFRS--LRRNSSLPANPLSSSFALKCCIKSGDLLGGLQ 134
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
+H ++ G+ SD+ + +L+ Y+TC A K+F + ++ VSWNV+ Y+R
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194
Query: 210 FDTALKVFGEMLKLHD----PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
L +F +M D PDG T + ACA LGAL G H ++ D+N +
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI----DENGLSG 250
Query: 266 VL-VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
L ++ LV MY +CGS++ A QVF M R+V SW ++I G +M+G + A++ F M+
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM-TKEYNVEPRLEHYGCLVDLFARAG 383
K P T G+LSAC+H G+V EG+M+FD M + E+ ++P L HYGC+VDL RA
Sbjct: 311 KF-GISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLL 443
+ +A +L+ M +KPD+ IWR+LL AC + VELGE + + E++ +G YVLL
Sbjct: 370 LLDKAYSLIKSMEMKPDSTIWRTLLGAC-RVHGDVELGERVISHLIELKAEE-AGDYVLL 427
Query: 444 SKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFL 503
Y++ +W +V LR LM +K + KPGCS IE+ G HEF D +HP+ E+IYK L
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Query: 504 NEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKN 563
EI+++L+ GY+ + + E+ + K LR HSE+LAIAFG+L + PG IRV KN
Sbjct: 488 AEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKN 547
Query: 564 LRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
LR C DCH K +S +Y+ +IVRDR+RFHHFK G+CSC D+W
Sbjct: 548 LRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/462 (43%), Positives = 303/462 (65%), Gaps = 7/462 (1%)
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
G+ +H+ +++ G+ S + NSL+H YA CG + A K+F M EK V+WN +++ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 207 AGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
G+ + AL ++ EM K PDG+T+ S++SACA +GAL+LG H Y++K + +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV---GLTRN 123
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
+ + L+D+Y +CG +E A+ +F+ M ++ SW S+I+G +++G + A++ F M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
E +P ITFVG+L AC+H GMV EG YF M +EY +EPR+EH+GC+VDL ARAG++
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSK 445
++A + MP++P+ VIWR+LL AC S +L E Q+ ++E + SG YVLLS
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS-DLAEFARIQILQLEPN-HSGDYVLLSN 301
Query: 446 LYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNE 505
+YAS RW++V +RK M GV K PG SL+E+ HEF GD +HP+S+ IY L E
Sbjct: 302 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 361
Query: 506 IDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLR 565
+ +L S GY+P S + VD + K++ + HSE++AIAF L+++ PI V KNLR
Sbjct: 362 MTGRLRSEGYVPQISNVY-VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 420
Query: 566 VCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
VC+DCH KL+S +YN EI+VRDR+RFHHFK+G+CSC DYW
Sbjct: 421 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 141/297 (47%), Gaps = 16/297 (5%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+ IH+ +R+ +++ + +LH Y++ D+ A ++F + + WN++I
Sbjct: 8 ETIHSVVIRS----GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+A + +A+ LY M + + PD +T +L ACA +L GK+VH ++K+G
Sbjct: 64 FAENGK-PEEALALYTEMN---SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ N L+ YA CG ++ A +F M +K+ VSW ++ G A+++F
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 219 EMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
M P T ++ AC+ G + G + + + + + C+VD+
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGF--EYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 277 CKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
+ G ++ A + + MP + +V W +++ ++HG ++ A F ++I + PN
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE---FARIQILQLEPN 291
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/587 (39%), Positives = 325/587 (55%), Gaps = 49/587 (8%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F+ + + Y+S +NYA +F + WNT+I Y R E +K
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG----LVDEAFKLFEE 202
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M + V+PD ++ AC T ++ + ++ L++ DT + +L+ YA GC
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 179 LDMALKIFQNMS-------------------------------EKSEVSWNVMVDSYVRA 207
+DMA + F+ MS +K V W M+ +YV +
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 208 GEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
AL+VF EM PD +M SVISACA LG L W H+ + + +++
Sbjct: 323 DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN---GLESEL 379
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI 326
+N L++MY KCG L+ + VFE+MP R+V SW+S+I SMHG+A AL F RM K
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM-KQ 438
Query: 327 EKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQ 386
E PN +TFVGVL C+H G+V EG F MT EYN+ P+LEHYGC+VDLF RA ++
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 387 EALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKL 446
EAL ++ MP+ + VIW SL+ A C+ +ELG+ AK++ E+E GA VL+S +
Sbjct: 499 EALEVIESMPVASNVVIWGSLMSA-CRIHGELELGKFAAKRILELEPDH-DGALVLMSNI 556
Query: 447 YASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
YA RW +V +R++M +K V K+ G S I+ +G +HEF GD H +S +IY L+E+
Sbjct: 557 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 616
Query: 507 DEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMP------IRV 560
KL+ GY+PD G+ LVD + KK + HSE+LA+ FGL+N IR+
Sbjct: 617 VSKLKLAGYVPD-CGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRI 675
Query: 561 FKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
KNLRVC DCH KL+S +Y EIIVRDR RFH +K+G CSC DYW
Sbjct: 676 VKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 188/407 (46%), Gaps = 41/407 (10%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHF-GKPNSFMW 92
+++H+KQ+HA LRT+ NH FL++ + S +YA +F P S ++
Sbjct: 24 SLNHIKQLHAHILRTV--INHKLNSFLFNLSVSSSSINL--SYALNVFSSIPSPPESIVF 79
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N +R +RS+ + I Y+ + + D ++F +LKA + +L EG ++H
Sbjct: 80 NPFLRDLSRSSEPR-ATILFYQRIRHVGGR---LDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
K+ D + + YA+CG ++ A +F MS + V+WN M++ Y R G D
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 213 ALKVFGEMLKLHD-PDGYTMQSVISACAGLGALS------------------------LG 247
A K+F EM + PD + +++SAC G + +
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 248 MWAHAYVMKKC----DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSI 303
M+A A M K ++ V+T +V Y KCG L+ AQ +F++ +D+ W ++
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 304 ILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEY 363
I + + AL F M P+ ++ V+SAC + G++++ +
Sbjct: 316 ISAYVESDYPQEALRVFEEMC-CSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVN 373
Query: 364 NVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+E L L++++A+ G + ++ +MP + + V W S+++A
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 8/274 (2%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+ LF+ + ++ YS L+ A +F K + W T+I AY S ++ +A+ +++
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES-DYPQEALRVFEE 334
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M + PD + V+ ACA+ L + K VH+ + G ES+ I N+LI+ YA
Sbjct: 335 MCC---SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSV 234
CG LD +F+ M ++ VSW+ M+++ GE AL +F M + + +P+ T V
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV 451
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
+ C+ G + G A + + N+ + C+VD++ + L A +V E MP
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTD--EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 295 -RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
+V W S++ +HG+ E R++++E
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/587 (38%), Positives = 353/587 (60%), Gaps = 36/587 (6%)
Query: 39 KQIHAQTLR--TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
K++HA L+ ++D + F+ S ++ Y + + R+F +WN +I
Sbjct: 322 KELHAYALKNGSLDENS-----FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEE--VVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
Y+++ H +A+ L+ + MEE ++ + T V+ AC + + + +H +
Sbjct: 377 AGYSQN-EHDKEALLLF----IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+K G + D + N+L+ Y+ G +D+A++IF M ++ V+WN M+ YV + + AL
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 215 KVFGEMLKLH------------DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNV 262
+ +M L P+ T+ +++ +CA L AL+ G HAY +K N+
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN---NL 548
Query: 263 AADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFR 322
A DV V + LVDMY KCG L+++++VF+++P ++V +WN II+ + MHG + A+D R
Sbjct: 549 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID-LLR 607
Query: 323 MVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARA 382
M+ ++ PN +TF+ V +AC+H GMV+EGL F +M +Y VEP +HY C+VDL RA
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667
Query: 383 GRIQEALNLVSEMPIKPD-AVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYV 441
GRI+EA L++ MP + A W SLL A + ++E+GE A+ + ++E +V S YV
Sbjct: 668 GRIKEAYQLMNMMPRDFNKAGAWSSLLGAS-RIHNNLEIGEIAAQNLIQLEPNVAS-HYV 725
Query: 442 LLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYK 501
LL+ +Y+SA W++ +R+ M ++GV K+PGCS IE H+F AGD++HP+SE +
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785
Query: 502 FLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRV 560
+L + E++ GY+PD S H V+E D K+ L HSE+LAIAFG+LN+ PG IRV
Sbjct: 786 YLETLWERMRKEGYVPDTSCVLHNVEE--DEKEILLCGHSEKLAIAFGILNTSPGTIIRV 843
Query: 561 FKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
KNLRVC+DCH TK IS I + EII+RD RFH FK+GTCSC DYW
Sbjct: 844 AKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 160/313 (51%), Gaps = 24/313 (7%)
Query: 55 PQALFLYSRILHYYSSLADLNYATRLFHHF--GKPNSFM--------WNTLIRAYARSAN 104
P L +SR H Y A AT G P+ F+ W L+R+ RS N
Sbjct: 18 PSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRS-N 76
Query: 105 HKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDT- 163
+A+ Y M+++ + PD+Y FP +LKA A + GKQ+HA + K GY D+
Sbjct: 77 LLREAVLTYVDMIVL---GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSV 133
Query: 164 RICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
+ N+L++ Y CG K+F +SE+++VSWN ++ S +++ AL+ F ML
Sbjct: 134 TVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE 193
Query: 224 H-DPDGYTMQSVISACAGLG---ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
+ +P +T+ SV++AC+ L L +G HAY ++K + N ++NT LV MY K
Sbjct: 194 NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN---SFIINT-LVAMYGKL 249
Query: 280 GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
G L ++ + RD+ +WN+++ + + AL+Y MV +E P+ T V
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV-LEGVEPDEFTISSV 308
Query: 340 LSACNHRGMVNEG 352
L AC+H M+ G
Sbjct: 309 LPACSHLEMLRTG 321
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 321/540 (59%), Gaps = 22/540 (4%)
Query: 74 LNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEE----EVVPDHY 129
++ R+F + + +NT+I YA+S +Y+ + M+ E ++ PD +
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSG--------MYEDALRMVREMGTTDLKPDSF 243
Query: 130 TFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM 189
T VL + + +GK++H +++ G +SD I +SL+ YA ++ + ++F +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGM 248
+ +SWN +V YV+ G ++ AL++F +M+ P SVI ACA L L LG
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFS 308
H YV++ +++ + + LVDMY KCG+++ A+++F+RM D SW +II+G +
Sbjct: 364 QLHGYVLRG---GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPR 368
+HG A+ F M K + PN + FV VL+AC+H G+V+E YF+ MTK Y +
Sbjct: 421 LHGHGHEAVSLFEEM-KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 369 LEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQV 428
LEHY + DL RAG+++EA N +S+M ++P +W +LL +C ++EL E++A+++
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHK-NLELAEKVAEKI 538
Query: 429 FEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFA 488
F ++ S GAYVL+ +YAS RW E+ LR M KG+ KKP CS IE+ H F +
Sbjct: 539 FTVD-SENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVS 597
Query: 489 GDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAF 547
GD +HP + I +FL + E++E GY+ D SG H VDE + K+ L HSERLA+AF
Sbjct: 598 GDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDE--EHKRELLFGHSERLAVAF 655
Query: 548 GLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
G++N+ PG IRV KN+R+C+DCH K IS I EIIVRD +RFHHF G CSC DYW
Sbjct: 656 GIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 201/439 (45%), Gaps = 61/439 (13%)
Query: 32 IITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
I + S KQ+HAQ +RT + +H A S ++ Y++L L+ A LF P
Sbjct: 18 IKSKSQAKQLHAQFIRT-QSLSHTSA----SIVISIYTNLKLLHEALLLFKTLKSPPVLA 72
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEV---VPDHYTFPFVLKACAHTFSLCEGK 148
W ++IR + Q++ KA+ +E PDH FP VLK+C L G+
Sbjct: 73 WKSVIRCFT------DQSL-FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 149 QVHAQLLKLGYESDTRICNSLIHFYA---------------------------------T 175
VH +++LG + D N+L++ YA T
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 176 C---GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTM 231
C +D ++F+ M K VS+N ++ Y ++G ++ AL++ EM PD +T+
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
SV+ + + G H YV++ K + +DV + + LVDMY K +E +++VF R
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIR---KGIDSDVYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
+ RD SWNS++ G+ +G+ AL F +MV K P ++ F V+ AC H ++
Sbjct: 303 LYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
G + + + LVD++++ G I+ A + M + D V W +++
Sbjct: 362 GKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGH 419
Query: 412 CKQD---ASVELGEEMAKQ 427
+V L EEM +Q
Sbjct: 420 ALHGHGHEAVSLFEEMKRQ 438
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 14/281 (4%)
Query: 39 KQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
K+IH +R ID+ +++ S ++ Y+ A + + R+F + WN+L+
Sbjct: 262 KEIHGYVIRKGIDSD-----VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
Y ++ + ++A+ L++ M+ +V P F V+ ACAH +L GKQ+H +L+
Sbjct: 317 GYVQNGRY-NEALRLFRQ---MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
G+ S+ I ++L+ Y+ CG + A KIF M+ EVSW ++ + G A+ +F
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 218 GEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
EM + P+ +V++AC+ +G + W + M K + ++ + D+
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEA-WGYFNSMTKV-YGLNQELEHYAAVADLL 490
Query: 277 CKCGSLEIAQQVFERMPYRDVNS-WNSIILGFSMHGKAEAA 316
+ G LE A +M S W++++ S+H E A
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELA 531
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/571 (39%), Positives = 327/571 (57%), Gaps = 19/571 (3%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K+IH +R+ + + + ++ Y+ L A +LF + N WN++I A
Sbjct: 256 KEIHGYAMRS----GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y ++ N K + K M++E V P + L ACA L G+ +H ++LG
Sbjct: 312 YVQNENPKEAMLIFQK----MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ + + NSLI Y C +D A +F + ++ VSWN M+ + + G AL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 219 EML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKC-DKNVAADVLVNTCLVDMY 276
+M + PD +T SVI+A A L W H VM+ C DKNV V T LVDMY
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV----FVTTALVDMY 483
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCG++ IA+ +F+ M R V +WN++I G+ HG +AAL+ F M K PN +TF
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTF 542
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
+ V+SAC+H G+V GL F MM + Y++E ++HYG +VDL RAGR+ EA + + +MP
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
+KP ++ ++L AC + +V E+ A+++FE+ G +VLL+ +Y +AS W +V
Sbjct: 603 VKPAVNVYGAMLGAC-QIHKNVNFAEKAAERLFELNPD-DGGYHVLLANIYRAASMWEKV 660
Query: 457 GLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYL 516
G +R M +G+ K PGCS++EI H FF+G T HP S+ IY FL ++ ++ GY+
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV 720
Query: 517 PDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKL 576
PD + V+ D K+ L HSE+LAI+FGLLN+ G I V KNLRVC+DCH TK
Sbjct: 721 PDTNLVLGVEN--DVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKY 778
Query: 577 ISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
IS + EI+VRD RFHHFK+G CSC DYW
Sbjct: 779 ISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 198/386 (51%), Gaps = 26/386 (6%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
LF + + + Y+ +N A ++F + + WNT++ Y+++ + A+E+ K+M
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR-MALEMVKSMC 228
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
EE + P T VL A + + GK++H ++ G++S I +L+ YA CG
Sbjct: 229 ---EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
L+ A ++F M E++ VSWN M+D+YV+ A+ +F +ML P ++ +
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 237 ACAGLGALSLGMWAHAYVMK-KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
ACA LG L G + H ++ D+NV+ +VN+ L+ MYCKC ++ A +F ++ R
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVS---VVNS-LISMYCKCKEVDTAASMFGKLQSR 401
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA-----CNHRGMVN 350
+ SWN++ILGF+ +G+ AL+YF +M + P++ T+V V++A H
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 351 EGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
G++ + K V LVD++A+ G I A L+ +M + W +++D
Sbjct: 461 HGVVMRSCLDKNVFVTT------ALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDG 513
Query: 411 CCKQ---DASVELGEEMAKQVFEIEG 433
A++EL EEM K + G
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNG 539
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 195/412 (47%), Gaps = 49/412 (11%)
Query: 36 SHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL 95
S LK++ Q L + Q F ++++ + ++ A R+F + +++T+
Sbjct: 48 SSLKELR-QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTM 106
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
++ +A+ ++ +A++ + + M ++V P Y F ++LK C L GK++H L+
Sbjct: 107 LKGFAKVSDLD-KALQFF---VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
K G+ D L + YA C ++ A K+F M E+ VSWN +V Y + G AL+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 216 VFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN--TCL 272
+ M + + P T+ SV+ A + L +S+G H Y M+ D LVN T L
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-----GFDSLVNISTAL 277
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
VDMY KCGSLE A+Q+F+ M R+V SWNS+I + + + A+ F +M+ E P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPT 336
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDL-------------- 378
++ +G L AC G + G + ++ E ++ + L+ +
Sbjct: 337 DVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 379 -----------------FARAGRIQEALNLVSEM---PIKPDAVIWRSLLDA 410
FA+ GR +ALN S+M +KPD + S++ A
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/583 (37%), Positives = 329/583 (56%), Gaps = 43/583 (7%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ + ++H Y S DL+ A ++F + + WN++I + + + +A+EL+K M
Sbjct: 166 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS-PDKALELFKKME 224
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
E+V H T VL ACA +L G+QV + + + + + N+++ Y CG
Sbjct: 225 ---SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-----------LKLHDP 226
++ A ++F M EK V+W M+D Y + +++ A +V M + ++
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 227 DG----------------------YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
+G T+ S +SACA +GAL LG W H+Y+ K +
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH---GIRM 398
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
+ V + L+ MY KCG LE +++VF + RDV W+++I G +MHG A+D F++M
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ 458
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
+ PN +TF V AC+H G+V+E F M Y + P +HY C+VD+ R+G
Sbjct: 459 EA-NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 385 IQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLS 444
+++A+ + MPI P +W +LL AC K A++ L E ++ E+E GA+VLLS
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGAC-KIHANLNLAEMACTRLLELEPR-NDGAHVLLS 575
Query: 445 KLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLN 504
+YA +W V LRK M G+ K+PGCS IEIDG+ HEF +GD HP SE +Y L+
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 505 EIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNL 564
E+ EKL+S GY P+ S + E + K+ +L LHSE+LAI +GL+++ IRV KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 565 RVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
RVC DCH V KLIS +Y+ EIIVRDR RFHHF++G CSC D+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 203/408 (49%), Gaps = 42/408 (10%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
+++ LKQ H +RT ++ A L++ + SS A L YA ++F KPNSF W
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFA--MAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
NTLIRAYA + + ++ + ++ E + P+ YTFPF++KA A SL G+ +H
Sbjct: 99 NTLIRAYASGPD---PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
+K SD + NSLIH Y +CG LD A K+F + EK VSWN M++ +V+ G D
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 213 ALKVFGEMLKLHDPDGY-TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
AL++F +M + TM V+SACA + L G +Y+ + V ++ +
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE---ENRVNVNLTLANA 272
Query: 272 LVDMYCKCGSLEIAQQVFE-------------------------------RMPYRDVNSW 300
++DMY KCGS+E A+++F+ MP +D+ +W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
N++I + +GK AL F + + N IT V LSAC G + G +
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYI 391
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
K++ + L+ ++++ G ++++ + + + K D +W +++
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMI 438
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 336/557 (60%), Gaps = 21/557 (3%)
Query: 54 HPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELY 113
H +FL + +++ Y LN A +LF + N W T+I AY++ H+ +A+EL
Sbjct: 92 HRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ-KALEL- 149
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
++LM+ + V P+ YT+ VL++C + + + +H ++K G ESD + ++LI +
Sbjct: 150 --LVLMLRDNVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQ 232
A G + AL +F M + WN ++ + + D AL++F M + + T+
Sbjct: 205 AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
SV+ AC GL L LGM AH +++K D+++N LVDMYCKCGSLE A +VF +M
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVK-----YDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
RDV +W+++I G + +G ++ AL F RM K PN IT VGVL AC+H G++ +G
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERM-KSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
YF M K Y ++P EHYGC++DL +AG++ +A+ L++EM +PDAV WR+LL AC
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 438
Query: 413 KQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKP 472
Q V L E AK+V ++ +G Y LLS +YA++ +W+ V +R M D+G+ K+P
Sbjct: 439 VQRNMV-LAEYAAKKVIALDPED-AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEP 496
Query: 473 GCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGK 532
GCS IE++ H F GD +HP+ ++ K LN++ +L +GY+P+ + V + ++G+
Sbjct: 497 GCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE---TNFVLQDLEGE 553
Query: 533 K--STLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDR 590
+ +LR HSE+LA+AFGL+ IR+ KNLR+C DCH KL S + I++RD
Sbjct: 554 QMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDP 613
Query: 591 ARFHHFKDGTCSCMDYW 607
R+HHF+DG CSC DYW
Sbjct: 614 IRYHHFQDGKCSCGDYW 630
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 191/403 (47%), Gaps = 36/403 (8%)
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
KAM + + D T+ ++K C ++ EG + L G+ + N LI+ Y
Sbjct: 47 KAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMY 106
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQ 232
L+ A ++F M +++ +SW M+ +Y + AL++ ML+ + P+ YT
Sbjct: 107 VKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYS 166
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
SV+ +C G+ + + H ++K + + +DV V + L+D++ K G E A VF+ M
Sbjct: 167 SVLRSCNGMSDVRM---LHCGIIK---EGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
D WNSII GF+ + +++ AL+ F RM K F+ T VL AC ++ G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRM-KRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
+ + K Y+ + L + LVD++ + G +++AL + ++M + D + W +++
Sbjct: 280 MQAHVHIVK-YDQDLILNN--ALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLA 335
Query: 413 KQDASVELGEEMAKQVFE-IEGSVCSGAYVLLSKLYASASR-------WNEVGLLRKLMS 464
+ S E A ++FE ++ S Y+ + + + S W ++KL
Sbjct: 336 QNGYSQE-----ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 465 DKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEID 507
V + GC +I++ G A K +D K LNE++
Sbjct: 391 IDPVREHYGC-MIDLLGKA----------GKLDDAVKLLNEME 422
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 329/568 (57%), Gaps = 18/568 (3%)
Query: 47 RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHK 106
R I Q FL ++++ YS L ++YA ++F K ++WN L RA A H
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL-AGHG 159
Query: 107 HQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHT----FSLCEGKQVHAQLLKLGYESD 162
+ + LY M + E D +T+ +VLKAC + L +GK++HA L + GY S
Sbjct: 160 EEVLGLYWKMNRIGVES---DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 163 TRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML- 221
I +L+ YA GC+D A +F M ++ VSW+ M+ Y + G+ AL+ F EM+
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 222 --KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
K P+ TM SV+ ACA L AL G H Y++++ + + + V + LV MY +C
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR---GLDSILPVISALVTMYGRC 333
Query: 280 GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
G LE+ Q+VF+RM RDV SWNS+I + +HG + A+ F M+ P +TFV V
Sbjct: 334 GKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA-NGASPTPVTFVSV 392
Query: 340 LSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKP 399
L AC+H G+V EG F+ M +++ ++P++EHY C+VDL RA R+ EA +V +M +P
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 400 DAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLL 459
+W SLL +C + +VEL E ++++F +E +G YVLL+ +YA A W+EV +
Sbjct: 453 GPKVWGSLLGSC-RIHGNVELAERASRRLFALEPK-NAGNYVLLADIYAEAQMWDEVKRV 510
Query: 460 RKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDY 519
+KL+ +G+ K PG +E+ + F + D +P E I+ FL ++ E ++ GY+P
Sbjct: 511 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQT 570
Query: 520 SGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISS 579
G ET + ++ L HSE+LA+AFGL+N+ G PIR+ KNLR+C DCH TK IS
Sbjct: 571 KGVLYELETEEKERIVLG-HSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISK 629
Query: 580 IYNVEIIVRDRARFHHFKDGTCSCMDYW 607
EI+VRD RFH FK+G CSC DYW
Sbjct: 630 FMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 157/324 (48%), Gaps = 19/324 (5%)
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N LI++ + K QAI + + +E P T+ ++ C H SL + +VH
Sbjct: 50 NQLIQSLCKEGKLK-QAIRV-------LSQESSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
+L G + D + LI Y+ G +D A K+F +++ WN + + AG +
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 213 ALKVFGEMLKLH-DPDGYTMQSVISACAG----LGALSLGMWAHAYVMKKCDKNVAADVL 267
L ++ +M ++ + D +T V+ AC + L G HA++ + + ++ V
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTR---RGYSSHVY 218
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
+ T LVDMY + G ++ A VF MP R+V SW+++I ++ +GKA AL F M++
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 328 K-FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQ 386
K PNS+T V VL AC + +G + + + ++ L LV ++ R G+++
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKLE 337
Query: 387 EALNLVSEMPIKPDAVIWRSLLDA 410
+ M + D V W SL+ +
Sbjct: 338 VGQRVFDRMHDR-DVVSWNSLISS 360
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 33/309 (10%)
Query: 34 TMSHL---KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSF 90
T++HL K+IHA R + +++ + ++ Y+ ++YA+ +F N
Sbjct: 194 TVNHLMKGKEIHAHLTRR----GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVV 249
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEE--EVVPDHYTFPFVLKACAHTFSLCEGK 148
W+ +I YA++ +A E + MM E + P+ T VL+ACA +L +GK
Sbjct: 250 SWSAMIACYAKNG----KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 149 QVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG 208
+H +L+ G +S + ++L+ Y CG L++ ++F M ++ VSWN ++ SY G
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 209 EFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLG------MWAHAYVMKKCDKN 261
A+++F EML P T SV+ AC+ G + G MW D
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR--------DHG 417
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERM---PYRDVNSWNSIILGFSMHGKAEAALD 318
+ + C+VD+ + L+ A ++ + M P V W S++ +HG E A
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV--WGSLLGSCRIHGNVELAER 475
Query: 319 YFFRMVKIE 327
R+ +E
Sbjct: 476 ASRRLFALE 484
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 340/575 (59%), Gaps = 20/575 (3%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
LK+IHA LRT + + L +++L + D+ YA ++F KP F+WNTL
Sbjct: 26 QLKKIHAIVLRTGFSEKNS----LLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
+ Y R+ +++ LYK M + V PD +T+PFV+KA + G +HA ++K
Sbjct: 82 KGYVRN-QLPFESLLLYKKMR---DLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK 137
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
G+ + L+ Y G L A +F++M K V+WN + V+ G AL+
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEY 197
Query: 217 FGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
F +M D +T+ S++SAC LG+L +G + K+ + +++V +DM
Sbjct: 198 FNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE---EIDCNIIVENARLDM 254
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
+ KCG+ E A+ +FE M R+V SW+++I+G++M+G + AL F M + E PN +T
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM-QNEGLRPNYVT 313
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTK--EYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
F+GVLSAC+H G+VNEG YF +M + + N+EPR EHY C+VDL R+G ++EA +
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 394 EMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAY-VLLSKLYASASR 452
+MP++PD IW +LL AC + LG+++A + E + G+Y VLLS +YA+A +
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMI-LGQKVADVLVETAPDI--GSYHVLLSNIYAAAGK 430
Query: 453 WNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES 512
W+ V +R M G K S +E +G H F GD +HP+S+ IY+ L+EI +K+
Sbjct: 431 WDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRK 490
Query: 513 MGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHK 572
MGY+PD D ++ K+ +L HSE+LAIAFGL+ RPG PIRV KNLR C DCH
Sbjct: 491 MGYVPDTCSV-FHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHA 549
Query: 573 VTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
+K +SS+ + EII+RD+ RFHHF++G CSC ++W
Sbjct: 550 FSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/548 (39%), Positives = 322/548 (58%), Gaps = 17/548 (3%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ Y+ D+ A +F+ ++ WN++I Y +S + +A++L+K MM+M E+
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL-MEAMKLFKMMMIMEEQ- 405
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
DH T+ ++ L GK +H+ +K G D + N+LI YA CG + +L
Sbjct: 406 --ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLG 242
KIF +M V+WN ++ + VR G+F T L+V +M K PD T + CA L
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
A LG H +++ +++ + L++MY KCG LE + +VFERM RDV +W
Sbjct: 524 AKRLGKEIHCCLLRF---GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 580
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
+I + M+G+ E AL+ F M K VP+S+ F+ ++ AC+H G+V+EGL F+ M
Sbjct: 581 MIYAYGMYGEGEKALETFADMEK-SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH 639
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGE 422
Y ++P +EHY C+VDL +R+ +I +A + MPIKPDA IW S+L AC + +E E
Sbjct: 640 YKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC-RTSGDMETAE 698
Query: 423 EMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGV 482
+++++ E+ G +L S YA+ +W++V L+RK + DK +TK PG S IE+
Sbjct: 699 RVSRRIIELNPDD-PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757
Query: 483 AHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRL---H 539
H F +GD + P+SE IYK L + + GY+PD V + ++ ++ RL H
Sbjct: 758 VHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD---PREVSQNLEEEEEKRRLICGH 814
Query: 540 SERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDG 599
SERLAIAFGLLN+ PG P++V KNLRVC DCH+VTKLIS I EI+VRD RFH FKDG
Sbjct: 815 SERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDG 874
Query: 600 TCSCMDYW 607
TCSC D W
Sbjct: 875 TCSCKDRW 882
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 197/381 (51%), Gaps = 21/381 (5%)
Query: 34 TMSHLKQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKP-NSFM 91
++ L++IHA + +D+++ F +++ YS + + +F N ++
Sbjct: 19 NLNELRRIHALVISLGLDSSD-----FFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN++IRA++++ +A+E Y + E +V PD YTFP V+KACA F G V+
Sbjct: 74 WNSIIRAFSKNGLFP-EALEFYGKLR---ESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
Q+L +G+ESD + N+L+ Y+ G L A ++F M + VSWN ++ Y G ++
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 212 TALKVFGEMLK-LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
AL+++ E+ PD +T+ SV+ A L + G H + +K V + V+VN
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK---SGVNSVVVVNN 246
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
LV MY K A++VF+ M RD S+N++I G+ E ++ F +++F
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE--NLDQFK 304
Query: 331 PNSITFVGVLSACNH-RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
P+ +T VL AC H R + +Y M+ + +E + + L+D++A+ G + A
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITAR 362
Query: 390 NLVSEMPIKPDAVIWRSLLDA 410
++ + M K D V W S++
Sbjct: 363 DVFNSMECK-DTVSWNSIISG 382
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 122/223 (54%), Gaps = 6/223 (2%)
Query: 132 PFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSE 191
PF+ +A + + +L E +++HA ++ LG +S LI Y+ +L +F+ +S
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 192 KSEVS-WNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMW 249
V WN ++ ++ + G F AL+ +G++ + PD YT SVI ACAGL +G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSM 309
+ ++ D +D+ V LVDMY + G L A+QVF+ MP RD+ SWNS+I G+S
Sbjct: 128 VYEQIL---DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 310 HGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
HG E AL+ + + K VP+S T VL A + +V +G
Sbjct: 185 HGYYEEALEIYHEL-KNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 155/335 (46%), Gaps = 12/335 (3%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A R+F +S +NT+I Y K + +E M L ++ PD T VL+
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYL-----KLEMVEESVRMFLENLDQFKPDLLTVSSVLR 315
Query: 137 ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS 196
AC H L K ++ +LK G+ ++ + N LI YA CG + A +F +M K VS
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 197 WNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVM 255
WN ++ Y+++G+ A+K+F M+ + + D T +IS L L G H+ +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEA 315
K + D+ V+ L+DMY KCG + + ++F M D +WN++I G
Sbjct: 436 K---SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 316 ALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCL 375
L +M K E VP+ TF+ L C G + + + E L+ L
Sbjct: 493 GLQVTTQMRKSE-VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNAL 550
Query: 376 VDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
++++++ G ++ + + M + D V W ++ A
Sbjct: 551 IEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYA 584
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 323/582 (55%), Gaps = 44/582 (7%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
+ S ++ Y ++ A RLF +G N + N + Y R + +A+ ++ L
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR-EALGVFN---L 327
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
MM+ V PD + + +C+ ++ GK H +L+ G+ES ICN+LI Y C
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-------------- 224
D A +IF MS K+ V+WN +V YV GE D A + F M + +
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 225 -------------------DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
+ DG TM S+ SAC LGAL L W + Y+ K + D
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN---GIQLD 504
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
V + T LVDM+ +CG E A +F + RDV++W + I +M G AE A++ F M++
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
+ P+ + FVG L+AC+H G+V +G F M K + V P HYGC+VDL RAG +
Sbjct: 565 -QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSK 445
+EA+ L+ +MP++P+ VIW SLL A C+ +VE+ A+++ ++ +G+YVLLS
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLL-AACRVQGNVEMAAYAAEKI-QVLAPERTGSYVLLSN 681
Query: 446 LYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNE 505
+YASA RWN++ +R M +KG+ K PG S I+I G HEF +GD +HP+ +I L+E
Sbjct: 682 VYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDE 741
Query: 506 IDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLR 565
+ ++ +G++PD S L+D K L HSE+LA+A+GL++S G IR+ KNLR
Sbjct: 742 VSQRASHLGHVPDLSNV-LMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLR 800
Query: 566 VCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
VCSDCH K S +YN EII+RD RFH+ + G CSC D+W
Sbjct: 801 VCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 190/382 (49%), Gaps = 38/382 (9%)
Query: 74 LNYATRLFHHFGKPNS-FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFP 132
L++A +F + + FM+N+LIR YA S+ ++AI L+ + MM + PD YTFP
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYA-SSGLCNEAILLF---LRMMNSGISPDKYTFP 138
Query: 133 FVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
F L ACA + + G Q+H ++K+GY D + NSL+HFYA CG LD A K+F MSE+
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWA 250
+ VSW M+ Y R A+ +F M++ + P+ TM VISACA L L G
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMH 310
+A++ + + + L+ + LVDMY KC ++++A+++F+ +++ N++ +
Sbjct: 259 YAFIR---NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN-----------HRGMVNEGLMYFDMM 359
G AL F M+ P+ I+ + +S+C+ H ++ G +D +
Sbjct: 316 GLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ---DA 416
L+D++ + R A + M K V W S++ + DA
Sbjct: 375 CN------------ALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGYVENGEVDA 421
Query: 417 SVELGEEMAKQVFEIEGSVCSG 438
+ E E M ++ ++ SG
Sbjct: 422 AWETFETMPEKNIVSWNTIISG 443
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 201/443 (45%), Gaps = 53/443 (11%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
QIH ++ + + LF+ + ++H+Y+ +L+ A ++F + N W ++I Y
Sbjct: 155 QIHGLIVKM----GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
AR + A++L+ M + +EEV P+ T V+ ACA L G++V+A + G
Sbjct: 211 ARR-DFAKDAVDLFFRM--VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
E + + ++L+ Y C +D+A ++F + N M +YVR G AL VF
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 220 MLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC--LVDMY 276
M+ PD +M S IS+C+ L + G H YV++ + N C L+DMY
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-----GFESWDNICNALIDMY 382
Query: 277 CKC-------------------------------GSLEIAQQVFERMPYRDVNSWNSIIL 305
KC G ++ A + FE MP +++ SWN+II
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN-EGLMYFDMMTKEYN 364
G E A++ F M E + +T + + SAC H G ++ +Y+ +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 365 VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR---SLLDACCKQDASVELG 421
++ RL LVD+F+R G + A+++ + + + D W + + ++EL
Sbjct: 503 LDVRLGT--TLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELF 559
Query: 422 EEMAKQVFEIEGSVCSGAYVLLS 444
++M +Q + +G GA S
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACS 582
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/601 (36%), Positives = 333/601 (55%), Gaps = 48/601 (7%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL--- 95
KQIH Q ++ L + S +L+ Y+++ ++ A ++F+ N+ M+N+L
Sbjct: 159 KQIHGQVIKL----GFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 96 ---------------------------IRAYARSANHKHQAIELYKAMMLMMEEEVVPDH 128
I+ A++ K +AIE ++ M + + + D
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK-EAIECFREMKV---QGLKMDQ 270
Query: 129 YTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQN 188
Y F VL AC ++ EGKQ+HA +++ ++ + ++LI Y C CL A +F
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 189 MSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLG 247
M +K+ VSW MV Y + G + A+K+F +M + DPD YT+ ISACA + +L G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 248 MWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGF 307
H K + V V+ LV +Y KCG ++ + ++F M RD SW +++ +
Sbjct: 391 SQFHG---KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 308 SMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEP 367
+ G+A + F +MV+ P+ +T GV+SAC+ G+V +G YF +MT EY + P
Sbjct: 448 AQFGRAVETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 368 RLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQ 427
+ HY C++DLF+R+GR++EA+ ++ MP PDA+ W +LL AC + ++E+G+ A+
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC-RNKGNLEIGKWAAES 565
Query: 428 VFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFF 487
+ E++ +G Y LLS +YAS +W+ V LR+ M +K V K+PG S I+ G H F
Sbjct: 566 LIELDPHHPAG-YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFS 624
Query: 488 AGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHL-VDETIDGKKSTLRLHSERLAIA 546
A D + P + IY L E++ K+ GY PD S H V+E + K L HSERLAIA
Sbjct: 625 ADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAV--KVKMLNYHSERLAIA 682
Query: 547 FGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDY 606
FGL+ G PIRV KNLRVC DCH TK ISS+ EI+VRD RFH FKDGTCSC D+
Sbjct: 683 FGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDF 742
Query: 607 W 607
W
Sbjct: 743 W 743
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 212/473 (44%), Gaps = 90/473 (19%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
++K IH +R + +P+ FLY+ I+H Y+ + YA R+F +PN F WN L+
Sbjct: 24 YVKMIHGNIIRALP---YPET-FLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLL 79
Query: 97 RAYARS------------------------------ANHKHQAIELYKAMMLMMEEEVVP 126
AY+++ + A++ Y MM +
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT- 138
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
T +LK + + GKQ+H Q++KLG+ES + + L++ YA GC+ A K+F
Sbjct: 139 -RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 187 QNMS------------------------------EKSEVSWNVMVDSYVRAGEFDTALKV 216
+ EK VSW M+ + G A++
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 217 FGEM----LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
F EM LK+ D Y SV+ AC GLGA++ G HA +++ N + V + L
Sbjct: 258 FREMKVQGLKM---DQYPFGSVLPACGGLGAINEGKQIHACIIR---TNFQDHIYVGSAL 311
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
+DMYCKC L A+ VF+RM ++V SW ++++G+ G+AE A+ F M + P+
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR-SGIDPD 370
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY----GCLVDLFARAGRIQEA 388
T +SAC + + EG + + L HY LV L+ + G I ++
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKA-----ITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 389 LNLVSEMPIKPDAVIWRSLLDACCKQDASVE---LGEEMAKQVFEIEGSVCSG 438
L +EM ++ DAV W +++ A + +VE L ++M + + +G +G
Sbjct: 426 TRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 146/314 (46%), Gaps = 12/314 (3%)
Query: 31 GIITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSF 90
G+ ++ KQIHA +RT N +++ S ++ Y L+YA +F + N
Sbjct: 282 GLGAINEGKQIHACIIRT----NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
W ++ Y ++ +A E K + M + PDHYT + ACA+ SL EG Q
Sbjct: 338 SWTAMVVGYGQTG----RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H + + G + NSL+ Y CG +D + ++F M+ + VSW MV +Y + G
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 211 DTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN 269
+++F +M++ PDG T+ VISAC+ G + G + + + + +
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ--RYFKLMTSEYGIVPSIGHY 511
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPY-RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+C++D++ + G LE A + MP+ D W +++ G E +++++
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 329 FVPNSITFVGVLSA 342
P T + + A
Sbjct: 572 HHPAGYTLLSSIYA 585
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/575 (37%), Positives = 334/575 (58%), Gaps = 24/575 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+++HA ++T + A +L +R+L +Y L A ++ + N W +I
Sbjct: 72 QRVHAHMIKT----RYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y+++ H +A+ ++ MM + P+ +TF VL +C L GKQ+H ++K
Sbjct: 128 YSQTG-HSSEALTVFAEMM---RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
Y+S + +SL+ YA G + A +IF+ + E+ VS ++ Y + G + AL++F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 219 EMLKLHD----PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
+LH P+ T S+++A +GL L G AH +V+++ + ++ L+D
Sbjct: 244 ---RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR---ELPFYAVLQNSLID 297
Query: 275 MYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV-PNS 333
MY KCG+L A+++F+ MP R SWN++++G+S HG L+ FR+++ EK V P++
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLE-LFRLMRDEKRVKPDA 356
Query: 334 ITFVGVLSACNHRGMVNEGLMYFD-MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+T + VLS C+H M + GL FD M+ EY +P EHYGC+VD+ RAGRI EA +
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 393 SEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASR 452
MP KP A + SLL AC + SV++GE + +++ EIE +G YV+LS LYASA R
Sbjct: 417 KRMPSKPTAGVLGSLLGAC-RVHLSVDIGESVGRRLIEIEPE-NAGNYVILSNLYASAGR 474
Query: 453 WNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES 512
W +V +R +M K VTK+PG S I+ + H F A D THP+ E++ + EI K++
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 513 MGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHK 572
GY+PD S L D + K+ L HSE+LA+ FGL+ + G+PIRVFKNLR+C DCH
Sbjct: 535 AGYVPDLSCV-LYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHN 593
Query: 573 VTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
K+ S ++ E+ +RD+ RFH DG CSC DYW
Sbjct: 594 FAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 192/389 (49%), Gaps = 27/389 (6%)
Query: 79 RLFHHF--GKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD--HYTFPFV 134
RL H P +++ T++ +N + Q L AM+ P+ + + +
Sbjct: 6 RLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAML-------GPEMGFHGYDAL 58
Query: 135 LKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE 194
L AC +L +G++VHA ++K Y T + L+ FY C CL+ A K+ M EK+
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAY 253
VSW M+ Y + G AL VF EM++ P+ +T +V+++C L LG H
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 254 VMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKA 313
++K N + + V + L+DMY K G ++ A+++FE +P RDV S +II G++ G
Sbjct: 179 IVK---WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 314 EAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM-YFDMMTKEYNVEPRLEHY 372
E AL+ F R+ E PN +T+ +L+A + +++ G + ++ +E L++
Sbjct: 236 EEALEMFHRL-HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN- 293
Query: 373 GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAK--QVFE 430
L+D++++ G + A L MP + A+ W ++L K LG E+ + ++
Sbjct: 294 -SLIDMYSKCGNLSYARRLFDNMPERT-AISWNAMLVGYSKHG----LGREVLELFRLMR 347
Query: 431 IEGSVCSGAYVLLSKLYA-SASRWNEVGL 458
E V A LL+ L S R + GL
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 317/556 (57%), Gaps = 26/556 (4%)
Query: 68 YSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
YS + A RLF K + W+ I YA+ + E M+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ----RGLGYEALGVCRQMLSSG 360
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHA-------QLLKLGYESDTRICNSLIHFYATC 176
+ P+ T VL CA +L GK++H L K G+ + + N LI YA C
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 177 GCLDMALKIFQNMS--EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK---LHDPDGYTM 231
+D A +F ++S E+ V+W VM+ Y + G+ + AL++ EM + P+ +T+
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
+ ACA L AL +G HAY ++ ++ A + V+ CL+DMY KCGS+ A+ VF+
Sbjct: 481 SCALVACASLAALRIGKQIHAYALR--NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
M ++ +W S++ G+ MHG E AL F M +I F + +T + VL AC+H GM+++
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI-GFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
G+ YF+ M + V P EHY CLVDL RAGR+ AL L+ EMP++P V+W + L +C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL-SC 656
Query: 412 CKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKK 471
C+ VELGE A+++ E+ S G+Y LLS LYA+A RW +V +R LM KGV K+
Sbjct: 657 CRIHGKVELGEYAAEKITEL-ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 472 PGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDG 531
PGCS +E FF GD THP +++IY+ L + ++++ +GY+P+ +G L D +
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPE-TGFALHDVDDEE 774
Query: 532 KKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRA 591
K L HSE+LA+A+G+L + G IR+ KNLRVC DCH +S I + +II+RD +
Sbjct: 775 KDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSS 834
Query: 592 RFHHFKDGTCSCMDYW 607
RFHHFK+G+CSC YW
Sbjct: 835 RFHHFKNGSCSCKGYW 850
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 217/466 (46%), Gaps = 64/466 (13%)
Query: 34 TMSHLKQIHAQTLR-TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNS--F 90
T+S +K IH + L I T N L S ++ Y S+ L++A L F ++ +
Sbjct: 40 TISQVKLIHQKLLSFGILTLN------LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
WN+LIR+Y + ++ + L+ LM PD+YTFPFV KAC S+ G+
Sbjct: 94 HWNSLIRSYGDNGC-ANKCLYLFG---LMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
HA L G+ S+ + N+L+ Y+ C L A K+F MS VSWN +++SY + G+
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 211 DTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
AL++F M PD T+ +V+ CA LG SLG H + + + ++ V
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT---SEMIQNMFV 266
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM----V 324
CLVDMY KCG ++ A VF M +DV SWN+++ G+S G+ E A+ F +M +
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 325 KIEKFV------------------------------PNSITFVGVLSACNHRGMVNEGLM 354
K++ PN +T + VLS C G + G
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 355 YFDMMTKEYNVEPRLEHYG-------CLVDLFARAGRIQEALNLVSEM-PIKPDAVIWRS 406
K Y ++ R +G L+D++A+ ++ A + + P + D V W
Sbjct: 387 IHCYAIK-YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 407 LLDACCKQ-DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
++ + DA+ L E+ ++FE + A+ + L A AS
Sbjct: 446 MIGGYSQHGDANKAL--ELLSEMFEEDCQTRPNAFTISCALVACAS 489
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 177/381 (46%), Gaps = 30/381 (7%)
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
M L+ A + +H++ + L+ E+ P PF+ K C ++ + K +
Sbjct: 1 MIRRLLIPNAAAKSHQYIKVSLFSTS----APEITP-----PFIHK-CK---TISQVKLI 47
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM--SEKSEVSWNVMVDSYVRAG 208
H +LL G + + + LI Y + GCL A+ + + S+ WN ++ SY G
Sbjct: 48 HQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNG 106
Query: 209 EFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVL 267
+ L +FG M L PD YT V AC + ++ G AHA + ++V
Sbjct: 107 CANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT---GFISNVF 163
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
V LV MY +C SL A++VF+ M DV SWNSII ++ GK + AL+ F RM
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 328 KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQE 387
P++IT V VL C G + G ++ CLVD++A+ G + E
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDE 282
Query: 388 ALNLVSEMPIKPDAVIWRSLLDACCK----QDASVELGEEMAKQVFEIEGSVCSGAYVLL 443
A + S M +K D V W +++ + +DA V L E+M ++ +++ S A +
Sbjct: 283 ANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDA-VRLFEKMQEEKIKMDVVTWSAA---I 337
Query: 444 SKLYASASRWNEVGLLRKLMS 464
S + +G+ R+++S
Sbjct: 338 SGYAQRGLGYEALGVCRQMLS 358
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 337/582 (57%), Gaps = 19/582 (3%)
Query: 31 GIITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHF-GKPNS 89
G +M L++IH+ + I+ H ++F + S L++A LF HF P++
Sbjct: 14 GCNSMKKLRKIHSHVI--INGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPST 71
Query: 90 FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQ 149
WN LIR ++ S++ +I Y M+L PD +TF F LK+C S+ + +
Sbjct: 72 SDWNYLIRGFSNSSS-PLNSILFYNRMLLSSVSR--PDLFTFNFALKSCERIKSIPKCLE 128
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
+H +++ G+ D + SL+ Y+ G +++A K+F M + VSWNVM+ + G
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 210 FDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+ AL ++ M D YT+ +++S+CA + AL++G+ H CD + V V
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA---CDIRCESCVFV 245
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+ L+DMY KCGSLE A VF M RDV +WNS+I+G+ +HG A+ +F +MV
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA-SG 304
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
PN+ITF+G+L C+H+G+V EG+ +F++M+ ++++ P ++HYGC+VDL+ RAG+++ +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 389 LNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
L ++ D V+WR+LL +C K ++ELGE K++ ++E + +G YVL++ +Y+
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSC-KIHRNLELGEVAMKKLVQLE-AFNAGDYVLMTSIYS 422
Query: 449 SASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDE 508
+A+ +RKL+ + PG S IEI H+F D HP+S IY L E+
Sbjct: 423 AANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVIN 482
Query: 509 KLESMGYLPDYS---GAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLR 565
+ GY P+ S L D + ++ HSE+LAIA+GL+ + G +R+ KNLR
Sbjct: 483 RAILAGYKPEDSNRTAPTLSDRCLGSADTS---HSEKLAIAYGLMRTTAGTTLRITKNLR 539
Query: 566 VCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
VC DCH TK +S +N EIIVRDR RFHHF DG CSC DYW
Sbjct: 540 VCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 322/581 (55%), Gaps = 44/581 (7%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
+ S ++ Y ++ A RLF +G N + N + Y R + +A+ ++ L
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR-EALGVFN---L 327
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
MM+ V PD + + +C+ ++ GK H +L+ G+ES ICN+LI Y C
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-------------- 224
D A +IF MS K+ V+WN +V YV GE D A + F M + +
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 225 -------------------DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
+ DG TM S+ SAC LGAL L W + Y+ K + D
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN---GIQLD 504
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
V + T LVDM+ +CG E A +F + RDV++W + I +M G AE A++ F M++
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
+ P+ + FVG L+AC+H G+V +G F M K + V P HYGC+VDL RAG +
Sbjct: 565 -QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSK 445
+EA+ L+ +MP++P+ VIW SLL A C+ +VE+ A+++ ++ +G+YVLLS
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLL-AACRVQGNVEMAAYAAEKI-QVLAPERTGSYVLLSN 681
Query: 446 LYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNE 505
+YASA RWN++ +R M +KG+ K PG S I+I G HEF +GD +HP+ +I L+E
Sbjct: 682 VYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDE 741
Query: 506 IDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLR 565
+ ++ +G++PD S L+D K L HSE+LA+A+GL++S G IR+ KNLR
Sbjct: 742 VSQRASHLGHVPDLSNV-LMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLR 800
Query: 566 VCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDY 606
VCSDCH K S +YN EII+RD RFH+ + G CSC D+
Sbjct: 801 VCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 190/382 (49%), Gaps = 38/382 (9%)
Query: 74 LNYATRLFHHFGKPNS-FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFP 132
L++A +F + + FM+N+LIR YA S+ ++AI L+ + MM + PD YTFP
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYA-SSGLCNEAILLF---LRMMNSGISPDKYTFP 138
Query: 133 FVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
F L ACA + + G Q+H ++K+GY D + NSL+HFYA CG LD A K+F MSE+
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWA 250
+ VSW M+ Y R A+ +F M++ + P+ TM VISACA L L G
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMH 310
+A++ + + + L+ + LVDMY KC ++++A+++F+ +++ N++ +
Sbjct: 259 YAFIR---NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN-----------HRGMVNEGLMYFDMM 359
G AL F M+ P+ I+ + +S+C+ H ++ G +D +
Sbjct: 316 GLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ---DA 416
L+D++ + R A + M K V W S++ + DA
Sbjct: 375 CN------------ALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGYVENGEVDA 421
Query: 417 SVELGEEMAKQVFEIEGSVCSG 438
+ E E M ++ ++ SG
Sbjct: 422 AWETFETMPEKNIVSWNTIISG 443
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 201/443 (45%), Gaps = 53/443 (11%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
QIH ++ + + LF+ + ++H+Y+ +L+ A ++F + N W ++I Y
Sbjct: 155 QIHGLIVKM----GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
AR + A++L+ M + +EEV P+ T V+ ACA L G++V+A + G
Sbjct: 211 ARR-DFAKDAVDLFFRM--VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
E + + ++L+ Y C +D+A ++F + N M +YVR G AL VF
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 220 MLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC--LVDMY 276
M+ PD +M S IS+C+ L + G H YV++ + N C L+DMY
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-----GFESWDNICNALIDMY 382
Query: 277 CKC-------------------------------GSLEIAQQVFERMPYRDVNSWNSIIL 305
KC G ++ A + FE MP +++ SWN+II
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN-EGLMYFDMMTKEYN 364
G E A++ F M E + +T + + SAC H G ++ +Y+ +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 365 VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR---SLLDACCKQDASVELG 421
++ RL LVD+F+R G + A+++ + + + D W + + ++EL
Sbjct: 503 LDVRLGT--TLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELF 559
Query: 422 EEMAKQVFEIEGSVCSGAYVLLS 444
++M +Q + +G GA S
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACS 582
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 335/579 (57%), Gaps = 22/579 (3%)
Query: 35 MSHLKQ---IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
+SHL+ +HAQ R +F+ + ++ Y+ L A +F P +
Sbjct: 132 LSHLQMGRFVHAQVFRL----GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 92 --WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQ 149
W ++ AYA++ +A+E++ M M +V PD VL A L +G+
Sbjct: 188 VSWTAIVSAYAQNGE-PMEALEIFSQMRKM---DVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
+HA ++K+G E + + SL YA CG + A +F M + + WN M+ Y + G
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 210 FDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
A+ +F EM+ K PD ++ S ISACA +G+L + YV + ++ DV +
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD---DVFI 360
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
++ L+DM+ KCGS+E A+ VF+R RDV W+++I+G+ +HG+A A+ +R ++
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS-LYRAMERGG 419
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
PN +TF+G+L ACNH GMV EG +F+ M ++ + P+ +HY C++DL RAG + +A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 389 LNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
++ MP++P +W +LL AC K+ VELGE A+Q+F I+ S +G YV LS LYA
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSAC-KKHRHVELGEYAAQQLFSIDPS-NTGHYVQLSNLYA 536
Query: 449 SASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDE 508
+A W+ V +R M +KG+ K GCS +E+ G F GD +HP+ E+I + + I+
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIES 596
Query: 509 KLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCS 568
+L+ G++ + A L D + + TL HSER+AIA+GL+++ G P+R+ KNLR C
Sbjct: 597 RLKEGGFVAN-KDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 655
Query: 569 DCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
+CH TKLIS + + EI+VRD RFHHFKDG CSC DYW
Sbjct: 656 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 205/377 (54%), Gaps = 19/377 (5%)
Query: 36 SHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL 95
+ LKQIHA+ L + FL ++++H SS D+ +A ++F +P F WN +
Sbjct: 35 AQLKQIHARLL----VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAI 90
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
IR Y+R+ NH A+ +Y M L V PD +TFP +LKAC+ L G+ VHAQ+
Sbjct: 91 IRGYSRN-NHFQDALLMYSNMQL---ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQN--MSEKSEVSWNVMVDSYVRAGEFDTA 213
+LG+++D + N LI YA C L A +F+ + E++ VSW +V +Y + GE A
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 214 LKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
L++F +M K+ PD + SV++A L L G HA V+ K + D+L++ L
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-KMGLEIEPDLLIS--L 263
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
MY KCG + A+ +F++M ++ WN++I G++ +G A A+D F M+ + P+
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KDVRPD 322
Query: 333 SITFVGVLSACNHRGMVNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+I+ +SAC G + + MY + +Y + + L+D+FA+ G + E L
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSV-EGARL 379
Query: 392 VSEMPIKPDAVIWRSLL 408
V + + D V+W +++
Sbjct: 380 VFDRTLDRDVVVWSAMI 396
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 324/572 (56%), Gaps = 20/572 (3%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+QIH+Q ++T N ++ S ++ Y+ L L+ A + F + W T+I
Sbjct: 510 EQIHSQIIKT----NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y + N +A+ ++ M+ + + D + ACA +L EG+Q+HAQ G
Sbjct: 566 YTQ-YNFDDKALTTFRQML---DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ SD N+L+ Y+ CG ++ + F+ ++WN +V + ++G + AL+VF
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 219 EMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M + D + +T S + A + + G HA + K ++ V L+ MY
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT---GYDSETEVCNALISMYA 738
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
KCGS+ A++ F + ++ SWN+II +S HG ALD F +M+ PN +T V
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH-SNVRPNHVTLV 797
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
GVLSAC+H G+V++G+ YF+ M EY + P+ EHY C+VD+ RAG + A + EMPI
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 398 KPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVG 457
KPDA++WR+LL AC ++E+GE A + E+E S YVLLS LYA + +W+
Sbjct: 858 KPDALVWRTLLSACVVH-KNMEIGEFAAHHLLELEPED-SATYVLLSNLYAVSKKWDARD 915
Query: 458 LLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLP 517
L R+ M +KGV K+PG S IE+ H F+ GD HP +++I+++ ++ ++ +GY+
Sbjct: 916 LTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQ 975
Query: 518 D-YSGAHLVDETI-DGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTK 575
D +S L++E + K + +HSE+LAI+FGLL+ +PI V KNLRVC+DCH K
Sbjct: 976 DCFS---LLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIK 1032
Query: 576 LISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
+S + N EIIVRD RFHHF+ G CSC DYW
Sbjct: 1033 FVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 187/381 (49%), Gaps = 15/381 (3%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
T+ +Q+HA T + +N+ + +L+ Y+ AD+ A F N +WN
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNK----IEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
++ AY + ++ + +++ M + EE+VP+ YT+P +LK C L G+Q+H+Q
Sbjct: 460 VMLVAYGLLDDLRN-SFRIFRQMQI---EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
++K ++ + +C+ LI YA G LD A I + K VSW M+ Y + D A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 214 LKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
L F +ML + D + + +SACAGL AL G HA + C ++D+ L
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA---QACVSGFSSDLPFQNAL 632
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
V +Y +CG +E + FE+ D +WN+++ GF G E AL F RM + E N
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR-EGIDNN 691
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+ TF + A + + +G ++TK + E L+ ++A+ G I +A
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 393 SEMPIKPDAVIWRSLLDACCK 413
E+ K + V W ++++A K
Sbjct: 751 LEVSTK-NEVSWNAIINAYSK 770
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 27/385 (7%)
Query: 31 GIITMSHLKQIHA----QTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGK 86
G + ++QIHA Q LR +P + LYSR + DL A R+F
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNP-LIDLYSR-----NGFVDL--ARRVFDGLRL 250
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
+ W +I +++ + +AI L+ M ++ ++P Y F VL AC SL
Sbjct: 251 KDHSSWVAMISGLSKN-ECEAEAIRLFCDMYVL---GIMPTPYAFSSVLSACKKIESLEI 306
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
G+Q+H +LKLG+ SDT +CN+L+ Y G L A IF NMS++ V++N +++ +
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ 366
Query: 207 AGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
G + A+++F M L +PD T+ S++ AC+ G L G HAY K A++
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK---LGFASN 423
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
+ L+++Y KC +E A F +V WN +++ + + + FR ++
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF-RIFRQMQ 482
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGC--LVDLFARAG 383
IE+ VPN T+ +L C G + G + K +L Y C L+D++A+ G
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK---TNFQLNAYVCSVLIDMYAKLG 539
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLL 408
++ A +++ K D V W +++
Sbjct: 540 KLDTAWDILIRFAGK-DVVSWTTMI 563
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 209/459 (45%), Gaps = 60/459 (13%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+++H+Q L+ +N L ++ +Y DL A ++F + F WN +I+
Sbjct: 105 RKLHSQILKLGLDSNGC----LSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKAC---AHTFSLCEGKQVHAQLL 155
A ++ E++ + M+ E V P+ TF VL+AC + F + E Q+HA++L
Sbjct: 161 LAS----RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE--QIHARIL 214
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
G T +CN LI Y+ G +D+A ++F + K SW M+ + A++
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 216 VFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
+F +M L P Y SV+SAC + +L +G H V+K ++D V LV
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK---LGFSSDTYVCNALVS 331
Query: 275 MYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSI 334
+Y G+L A+ +F M RD ++N++I G S G E A++ F RM ++ P+S
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSN 390
Query: 335 TFVGVLSACNHRGMVNEGLMYFDMMTK-EYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
T ++ AC+ G + G TK + ++E G L++L+A+ I+ AL+
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFL 448
Query: 394 EMPIKPDAVIWRSLLDA----------------------------------CCKQDASVE 419
E ++ + V+W +L A C + +E
Sbjct: 449 ETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 420 LGEEMAKQV----FEIEGSVCSGAYVLLSKLYASASRWN 454
LGE++ Q+ F++ VCS + +KL + W+
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 153/310 (49%), Gaps = 18/310 (5%)
Query: 124 VVPDHYTFPFVLKACAHT-FSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMA 182
+ P+H T ++L+ C T SL EG+++H+Q+LKLG +S+ + L FY G L A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGL 241
K+F M E++ +WN M+ +F M+ + P+ T V+ AC G
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG- 198
Query: 242 GALSLGM--WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
G+++ + HA ++ + ++ +V L+D+Y + G +++A++VF+ + +D +S
Sbjct: 199 GSVAFDVVEQIHARILYQGLRD---STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
W ++I G S + A+ F M + +P F VLSAC + G ++
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMY-VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 360 TKEYNVEPRLEHYGC--LVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA---CCKQ 414
K + + Y C LV L+ G + A ++ S M + DAV + +L++ C
Sbjct: 315 LK---LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYG 370
Query: 415 DASVELGEEM 424
+ ++EL + M
Sbjct: 371 EKAMELFKRM 380
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 320/544 (58%), Gaps = 19/544 (3%)
Query: 68 YSSLADLNYATRLFHHFG-KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVP 126
YS + A RLF G N W +I + ++ + K +A++L+ M + V P
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN-DGKEEAVDLFSEMK---RKGVRP 395
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
+ +T+ +L A + +VHAQ++K YE + + +L+ Y G ++ A K+F
Sbjct: 396 NEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGA-L 244
+ +K V+W+ M+ Y + GE + A+K+FGE+ K P+ +T S+++ CA A +
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSII 304
G H + +K + + + V++ L+ MY K G++E A++VF+R +D+ SWNS+I
Sbjct: 512 GQGKQFHGFAIKS---RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 305 LGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYN 364
G++ HG+A ALD F M K K + +TF+GV +AC H G+V EG YFD+M ++
Sbjct: 569 SGYAQHGQAMKALDVFKEMKK-RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 365 VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEM 424
+ P EH C+VDL++RAG++++A+ ++ MP + IWR++L A C+ ELG
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL-AACRVHKKTELGRLA 686
Query: 425 AKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAH 484
A+++ ++ S AYVLLS +YA + W E +RKLM+++ V K+PG S IE+ +
Sbjct: 687 AEKIIAMKPE-DSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 485 EFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLA 544
F AGD +HP + IY L ++ +L+ +GY PD S L D + K++ L HSERLA
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV-LQDIDDEHKEAVLAQHSERLA 804
Query: 545 IAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHF-KDGTCSC 603
IAFGL+ + G P+ + KNLRVC DCH V KLI+ I EI+VRD RFHHF DG CSC
Sbjct: 805 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864
Query: 604 MDYW 607
D+W
Sbjct: 865 GDFW 868
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 13/278 (4%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
++HAQ ++T N+ ++ + + +L Y L + A ++F + W+ ++ Y
Sbjct: 414 EVHAQVVKT----NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGY 469
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHT-FSLCEGKQVHAQLLKLG 158
A++ AI+++ + + + P+ +TF +L CA T S+ +GKQ H +K
Sbjct: 470 AQTG-ETEAAIKMFGE---LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+S + ++L+ YA G ++ A ++F+ EK VSWN M+ Y + G+ AL VF
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 219 EMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
EM K DG T V +AC G + G +++ C +A N+C+VD+Y
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC--KIAPTKEHNSCMVDLYS 643
Query: 278 KCGSLEIAQQVFERMPYRDVNS-WNSIILGFSMHGKAE 314
+ G LE A +V E MP ++ W +I+ +H K E
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 166/396 (41%), Gaps = 45/396 (11%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
+ ++ Y ++ ++F + N W TLI YAR++ + E+ M M
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMND----EVLTLFMRMQN 187
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
E P+ +TF L A G QVH ++K G + + NSLI+ Y CG +
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM----LKLHDPDGYTMQSVISA 237
A +F KS V+WN M+ Y G AL +F M ++L + + SVI
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES---SFASVIKL 304
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP-YRD 296
CA L L H V+K D + T L+ Y KC ++ A ++F+ + +
Sbjct: 305 CANLKELRFTEQLHCSVVK---YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA-------------- 342
V SW ++I GF + E A+D F M K + PN T+ +L+A
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 343 -CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDL-----------FARAGRIQEALN 390
N+ G D K VE + + + D +A+ G + A+
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 391 LVSEMP---IKPDAVIWRSLLDACCKQDASVELGEE 423
+ E+ IKP+ + S+L+ C +AS+ G++
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 516
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 183/387 (47%), Gaps = 28/387 (7%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
+++ Y ++ A LF + WN++I YA + +A+ ++ +M L
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG-LDLEALGMFYSMRL---NY 290
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
V +F V+K CA+ L +Q+H ++K G+ D I +L+ Y+ C + AL
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 184 KIFQNMS-EKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGL 241
++F+ + + VSW M+ +++ + A+ +F EM K P+ +T +++A +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
+ HA V+K N V T L+D Y K G +E A +VF + +D+ +W+
Sbjct: 411 SPSEV----HAQVVK---TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC-NHRGMVNEGLMYFDMMT 360
+++ G++ G+ EAA+ F + K PN TF +L+ C + +G +
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTK-GGIKPNEFTFSSILNVCAATNASMGQGKQFHG--- 519
Query: 361 KEYNVEPRLEHYGC----LVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD- 415
+ ++ RL+ C L+ ++A+ G I+ A + K D V W S++ +
Sbjct: 520 --FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ 576
Query: 416 --ASVELGEEMAKQVFEIEGSVCSGAY 440
++++ +EM K+ +++G G +
Sbjct: 577 AMKALDVFKEMKKRKVKMDGVTFIGVF 603
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 144/320 (45%), Gaps = 39/320 (12%)
Query: 127 DHYTFPFVLKACAHTFSLCE---GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
D F VLK A +LC+ G+Q+H Q +K G+ D + SL+ Y
Sbjct: 92 DCSIFSSVLKVSA---TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR 148
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLG 242
K+F M E++ V+W ++ Y R D L +F M + P+ +T + + A G
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 243 ALSLGMWAHAYVMKK-CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
G+ H V+K DK + V+ L+++Y KCG++ A+ +F++ + V +WN
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIP----VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWN 264
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN-----------HRGMVN 350
S+I G++ +G AL F+ M ++ + +F V+ C H +V
Sbjct: 265 SMISGYAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 351 EGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
G ++ + N+ L+ +++ + +AL L E+ + V W +++
Sbjct: 324 YGFLF------DQNIRT------ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 411 CCKQDA---SVELGEEMAKQ 427
+ D +V+L EM ++
Sbjct: 372 FLQNDGKEEAVDLFSEMKRK 391
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 50/267 (18%)
Query: 34 TMSHLKQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
+M KQ H +++ +D++ L + S +L Y+ ++ A +F + + W
Sbjct: 510 SMGQGKQFHGFAIKSRLDSS-----LCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 564
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N++I YA+ +A++++K M + +V D TF V AC H + EG++
Sbjct: 565 NSMISGYAQHG-QAMKALDVFKE---MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
Query: 153 QLLKLGYESDTRICNS-LIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
+++ + T+ NS ++ Y+ G L+ A+K+ +NM
Sbjct: 621 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP--------------------- 659
Query: 212 TALKVFGEMLKLHDPDGYTM-QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
+P G T+ +++++AC LG A ++ ++ AA VL
Sbjct: 660 -------------NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL--- 703
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDV 297
L +MY + G + +V + M R+V
Sbjct: 704 -LSNMYAESGDWQERAKVRKLMNERNV 729
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 330/576 (57%), Gaps = 21/576 (3%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLF--HHFGKPNSFMW 92
+S KQ+H ++ N+ F+ + ++ YS + A LF H+F + W
Sbjct: 433 LSLSKQVHVHAIKI----NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF---DLVAW 485
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N ++ Y +S + H+ ++L+ LM ++ D +T V K C F++ +GKQVHA
Sbjct: 486 NAMMAGYTQS-HDGHKTLKLFA---LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
+K GY+ D + + ++ Y CG + A F ++ +V+W M+ + GE +
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 601
Query: 213 ALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
A VF +M + PD +T+ ++ A + L AL G HA +K N D V T
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL---NCTNDPFVGTS 658
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
LVDMY KCGS++ A +F+R+ ++ +WN++++G + HG+ + L F+ +K P
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ-LFKQMKSLGIKP 717
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ +TF+GVLSAC+H G+V+E + M +Y ++P +EHY CL D RAG +++A NL
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+ M ++ A ++R+LL A C+ E G+ +A ++ E+E + S AYVLLS +YA+AS
Sbjct: 778 IESMSMEASASMYRTLL-AACRVQGDTETGKRVATKLLELE-PLDSSAYVLLSNMYAAAS 835
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
+W+E+ L R +M V K PG S IE+ H F D ++ ++E IY+ + ++ ++
Sbjct: 836 KWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIK 895
Query: 512 SMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCH 571
GY+P+ + LVD + K+ L HSE+LA+AFGLL++ P PIRV KNLRVC DCH
Sbjct: 896 QEGYVPE-TDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCH 954
Query: 572 KVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
K I+ +YN EI++RD RFH FKDG CSC DYW
Sbjct: 955 NAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 150/322 (46%), Gaps = 17/322 (5%)
Query: 105 HKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTR 164
H Q L K M+E +V D TF +L SL G+QVH LKLG +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 165 ICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH 224
+ NSLI+ Y A +F NMSE+ +SWN ++ + G A+ +F ++L+
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 225 -DPDGYTMQSVISACAGLG-ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
PD YTM SV+ A + L LSL H + +K N +D V+T L+D Y + +
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK---INNVSDSFVSTALIDAYSRNRCM 468
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
+ A+ +FER + D+ +WN+++ G++ L F M K + + T V
Sbjct: 469 KEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHK-QGERSDDFTLATVFKT 526
Query: 343 CNHRGMVNEGLMYFDMMTKE-YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDA 401
C +N+G K Y+++ L ++D++ + G + A +P+ PD
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLD--LWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDD 583
Query: 402 VIWRSLLDACCKQDASVELGEE 423
V W +++ C +E GEE
Sbjct: 584 VAWTTMISGC------IENGEE 599
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 10/194 (5%)
Query: 131 FPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
F F+ A + L GK HA++L + + N+LI Y+ CG L A ++F M
Sbjct: 43 FGFLRNAITSS-DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 191 EKSEVSWNVMVDSYVRAGE--FDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGM 248
++ VSWN ++ +Y ++ E + + F L YT + +S L S +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 249 WA----HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSII 304
WA H Y C + D V LV++Y K G ++ + +FE MPYRDV WN ++
Sbjct: 162 WASESFHGYA---CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 305 LGFSMHGKAEAALD 318
+ G E A+D
Sbjct: 219 KAYLEMGFKEEAID 232
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGK--AEAALDYF--FR 322
L+N L+ MY KCGSL A++VF++MP RD+ SWNSI+ ++ + E F FR
Sbjct: 76 LINN-LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 323 MVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARA 382
+++ + + +T +L C H G V + K ++ G LV+++ +
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK-IGLDGDEFVAGALVNIYLKF 193
Query: 383 GRIQEALNLVSEMPIKPDAVIWRSLLDA 410
G+++E L EMP + D V+W +L A
Sbjct: 194 GKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
IT S L R + +P+ FL + ++ YS L YA R+F + W
Sbjct: 50 ITSSDLMLGKCTHARILTFEENPER-FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSW 108
Query: 93 NTLIRAYARSAN----HKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGK 148
N+++ AYA+S+ + QA L++ ++ ++ V T +LK C H+ + +
Sbjct: 109 NSILAAYAQSSECVVENIQQAFLLFR---ILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 149 QVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG 208
H K+G + D + +L++ Y G + +F+ M + V WN+M+ +Y+ G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/637 (35%), Positives = 348/637 (54%), Gaps = 81/637 (12%)
Query: 38 LKQIHAQTLR-TIDTTNHPQALFLYSRILHYYSSLAD-LNYATRLFHHFGKPNSFMWNTL 95
L QIH ++ +DT ++ F ILH S++D L YA RL F +P++FM+NTL
Sbjct: 21 LTQIHGLFIKYGVDTDSY----FTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTL 76
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
+R Y+ S + H ++ ++ MM + V PD ++F FV+KA + SL G Q+H Q L
Sbjct: 77 VRGYSES-DEPHNSVAVFVEMM--RKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQAL 133
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSE------------------------ 191
K G ES + +LI Y CGC++ A K+F M +
Sbjct: 134 KHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGARE 193
Query: 192 -------KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD------------------- 225
++ SWNVM+ Y++AGE ++A ++F EM D
Sbjct: 194 IFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 226 -------------PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
P+ ++ V+SAC+ G+ G H +V K + V VN L
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA---GYSWIVSVNNAL 310
Query: 273 VDMYCKCGSLEIAQQVFERM-PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
+DMY +CG++ +A+ VFE M R + SW S+I G +MHG+ E A+ F M P
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY-GVTP 369
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ I+F+ +L AC+H G++ EG YF M + Y++EP +EHYGC+VDL+ R+G++Q+A +
Sbjct: 370 DGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDF 429
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+ +MPI P A++WR+LL AC ++EL E++ +++ E++ + SG VLLS YA+A
Sbjct: 430 ICQMPIPPTAIVWRTLLGACSSH-GNIELAEQVKQRLNELDPN-NSGDLVLLSNAYATAG 487
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL- 510
+W +V +RK M + + K SL+E+ ++F AG+ + ++ L EI +L
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK 547
Query: 511 ESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDC 570
+ GY P+ + A L D + K+ + HSE+LA+AF L G IR+ KNLR+C DC
Sbjct: 548 DEAGYTPEVASA-LYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDC 606
Query: 571 HKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
H V KL S +Y VEI+VRDR RFH FKDG+CSC DYW
Sbjct: 607 HAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 154/406 (37%), Gaps = 113/406 (27%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC--GCLDMALKIFQNMSE 191
+L +C + +L Q+H +K G ++D+ LI A L A ++ E
Sbjct: 11 LLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 192 KSEVSWNVMVDSYVRAGEFDTALKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGMW 249
+N +V Y + E ++ VF EM++ PD ++ VI A +L G
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV--------------------- 288
H +K + + + V T L+ MY CG +E A++V
Sbjct: 128 MHCQALKH---GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 289 ----------FERMPYRDVNSWNSIILGFSMHGKAEAALDYF------------------ 320
F++M R+ SWN ++ G+ G+ E+A F
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 321 ------------FRMVKIEKFVPNSITFVGVLSACNHRG--------------------- 347
FR ++ PN ++ GVLSAC+ G
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 348 MVNEGLMYFDMMTKEYNVE-PRLEHYG-----CLVDL------FARAGRIQEALNLVSEM 395
VN L+ DM ++ NV RL G C+V A G+ +EA+ L +EM
Sbjct: 305 SVNNALI--DMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 396 P---IKPDAVIWRSLLDACCKQDASVELGEEM---AKQVFEIEGSV 435
+ PD + + SLL A C +E GE+ K+V+ IE +
Sbjct: 363 TAYGVTPDGISFISLLHA-CSHAGLIEEGEDYFSEMKRVYHIEPEI 407
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 332/574 (57%), Gaps = 17/574 (2%)
Query: 39 KQIHAQTLRTIDTTNHPQALF-LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
KQ+H+ +R+ + +L +Y++ S+ ++ ++F + W LI
Sbjct: 289 KQLHSWAIRSGLVDDVECSLVDMYAKC----SADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
Y ++ N +AI L+ M+ + V P+H+TF KAC + GKQV Q K
Sbjct: 345 GYMKNCNLATEAINLFSEMI--TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
G S++ + NS+I + ++ A + F+++SEK+ VS+N +D R F+ A K+
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 218 GEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
E+ + +T S++S A +G++ G H+ V+K ++ + V L+ MY
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL---GLSCNQPVCNALISMY 519
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCGS++ A +VF M R+V SW S+I GF+ HG A L+ F +M++ E PN +T+
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE-EGVKPNEVTY 578
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
V +LSAC+H G+V+EG +F+ M +++ ++P++EHY C+VDL RAG + +A ++ MP
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
+ D ++WR+ L AC + ++ ELG+ A+++ E++ + AY+ LS +YA A +W E
Sbjct: 639 FQADVLVWRTFLGAC-RVHSNTELGKLAARKILELDPNE-PAAYIQLSNIYACAGKWEES 696
Query: 457 GLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYL 516
+R+ M ++ + K+ GCS IE+ H+F+ GDT HP + IY L+ + +++ GY+
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYV 756
Query: 517 PDYSGAHLVDETIDGKKSTLRL---HSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKV 573
PD E + + RL HSE++A+AFGL+++ P+RVFKNLRVC DCH
Sbjct: 757 PDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNA 816
Query: 574 TKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
K IS++ EI++RD RFHHFKDG CSC DYW
Sbjct: 817 MKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 203/433 (46%), Gaps = 32/433 (7%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLF---HHFGKPNSFMWNTL 95
K +HA R I+ P ++ LY+ ++ YS D A +F FGK + W+ +
Sbjct: 82 KLVHA---RLIEFDIEPDSV-LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
+ Y + + ++ K + +E +VP+ Y + V++AC+++ + G+ L+
Sbjct: 138 MACYGNNG----RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193
Query: 156 KLG-YESDTRICNSLIHFYATC-GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
K G +ESD + SLI + + A K+F MSE + V+W +M+ ++ G A
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA 253
Query: 214 LKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
++ F +M L + D +T+ SV SACA L LSLG H++ ++ + D V L
Sbjct: 254 IRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR---SGLVDD--VECSL 308
Query: 273 VDMYCKC---GSLEIAQQVFERMPYRDVNSWNSIILGFSMH-GKAEAALDYFFRMVKIEK 328
VDMY KC GS++ ++VF+RM V SW ++I G+ + A A++ F M+
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
PN TF AC + G K + ++ +F ++ R+++A
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDA 427
Query: 389 LNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
+ K + V + + LD C+ + + E ++ ++ E E V A+ S L
Sbjct: 428 QRAFESLSEK-NLVSYNTFLDGTCR-NLNFEQAFKLLSEITERELGV--SAFTFASLLSG 483
Query: 449 SASRWNEVGLLRK 461
A+ VG +RK
Sbjct: 484 VAN----VGSIRK 492
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 185/437 (42%), Gaps = 58/437 (13%)
Query: 115 AMMLMMEEEVVP-DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
A+ LM + + P D TF +LK+C GK VHA+L++ E D+ + NSLI Y
Sbjct: 48 ALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 174 ATCGCLDMALKIFQNM---SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGY 229
+ G A +F+ M ++ VSW+ M+ Y G A+KVF E L+L P+ Y
Sbjct: 108 SKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDY 167
Query: 230 TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC-GSLEIAQQV 288
+VI AC+ + +G ++MK + +DV V L+DM+ K S E A +V
Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKT--GHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 289 FERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN---- 344
F++M +V +W +I G A+ +F MV + F + T V SAC
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV-LSGFESDKFTLSSVFSACAELEN 284
Query: 345 -------HRGMVNEGLM------YFDMMTK---------EYNVEPRLEHYGCLVDLFARA 382
H + GL+ DM K V R+E + +
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 383 GRIQ------EALNLVSEMP----IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIE 432
G ++ EA+NL SEM ++P+ + S AC + +G+++ Q F+
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL-SDPRVGKQVLGQAFKRG 403
Query: 433 GSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTT 492
+ S + ++ + R + + +S+K + + F G
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS------------YNTFLDGTCR 451
Query: 493 HPKSEDIYKFLNEIDEK 509
+ E +K L+EI E+
Sbjct: 452 NLNFEQAFKLLSEITER 468
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 313/548 (57%), Gaps = 17/548 (3%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
+L YS DL+ A +F + + ++I YAR +A++L++ M EE
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-LAGEAVKLFEEME---EEG 392
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
+ PD YT VL CA L EGK+VH + + D + N+L+ YA CG + A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML--KLHDPDGYTMQSVISACAGL 241
+F M K +SWN ++ Y + + AL +F +L K PD T+ V+ ACA L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
A G H Y+M+ +D V LVDMY KCG+L +A +F+ + +D+ SW
Sbjct: 513 SAFDKGREIHGYIMRN---GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 302 SIILGFSMHGKAEAALDYF--FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
+I G+ MHG + A+ F R IE + I+FV +L AC+H G+V+EG +F++M
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIE---ADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
E +EP +EHY C+VD+ AR G + +A + MPI PDA IW +LL C+ V+
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL-CGCRIHHDVK 685
Query: 420 LGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEI 479
L E++A++VFE+E +G YVL++ +YA A +W +V LRK + +G+ K PGCS IEI
Sbjct: 686 LAEKVAEKVFELEPEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Query: 480 DGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLH 539
G + F AGD+++P++E+I FL ++ ++ GY P + L+D K+ L H
Sbjct: 745 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP-LTKYALIDAEEMEKEEALCGH 803
Query: 540 SERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDG 599
SE+LA+A G+++S G IRV KNLRVC DCH++ K +S + EI++RD RFH FKDG
Sbjct: 804 SEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDG 863
Query: 600 TCSCMDYW 607
CSC +W
Sbjct: 864 HCSCRGFW 871
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 183/356 (51%), Gaps = 11/356 (3%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L S++ Y++ DL A+R+F + WN L+ A+S + +I L+K MM
Sbjct: 131 LGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMM-- 187
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
V D YTF V K+ + S+ G+Q+H +LK G+ + NSL+ FY +
Sbjct: 188 -SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISAC 238
D A K+F M+E+ +SWN +++ YV G + L VF +ML + D T+ SV + C
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC 306
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
A +SLG H+ +K C D NT L+DMY KCG L+ A+ VF M R V
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSR--EDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVV 363
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
S+ S+I G++ G A A+ F M + E P+ T VL+ C +++EG +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
+ KE ++ + L+D++A+ G +QEA + SEM +K D + W +++ K
Sbjct: 423 I-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKN 476
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 9/256 (3%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ + ++ Y+ + A +F + WNT+I Y+++ + ++A+ L+ +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC-YANEALSLFN--L 488
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
L+ E+ PD T VL ACA + +G+++H +++ GY SD + NSL+ YA CG
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
L +A +F +++ K VSW VM+ Y G A+ +F +M + + D + S++
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 608
Query: 237 ACAGLGALSLGMWAHAYVMK-KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY- 294
AC+ G + G W +M+ +C + V C+VDM + G L A + E MP
Sbjct: 609 ACSHSGLVDEG-WRFFNIMRHEC--KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 295 RDVNSWNSIILGFSMH 310
D W +++ G +H
Sbjct: 666 PDATIWGALLCGCRIH 681
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 165/340 (48%), Gaps = 18/340 (5%)
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
NT +R + S N ++ A++L L + + D T VL+ CA + SL +GK+V
Sbjct: 65 NTQLRRFCESGNLEN-AVKL-----LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDN 118
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
+ G+ D+ + + L Y CG L A ++F + + + WN++++ ++G+F
Sbjct: 119 FIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSG 178
Query: 213 ALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
++ +F +M+ + D YT V + + L ++ G H +++K V
Sbjct: 179 SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK---SGFGERNSVGNS 235
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
LV Y K ++ A++VF+ M RDV SWNSII G+ +G AE L F +M+ +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEI 294
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKE-YNVEPRLEHYGCLVDLFARAGRIQEALN 390
+ T V V + C +++ G + K ++ E R L+D++++ G + A
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF--CNTLLDMYSKCGDLDSAKA 352
Query: 391 LVSEMPIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQ 427
+ EM + V + S++ ++ +V+L EEM ++
Sbjct: 353 VFREMSDRS-VVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/573 (36%), Positives = 327/573 (57%), Gaps = 21/573 (3%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+Q+HA ++ TT + + ++IL +YS + LF + + +N +I +
Sbjct: 270 QQLHALSV----TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPF--VLKACAHTFSLCEGKQVHAQLLK 156
Y++ A+ ++ ++ M M D FPF +L A+ SL G+Q+H Q L
Sbjct: 326 YSQ-ADQYEASLHFFREMQCMGF-----DRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
+S + NSL+ YA C + A IF+++ +++ VSW ++ YV+ G LK+
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 217 FGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
F +M + D T +V+ A A +L LG HA++++ + +V + LVDM
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN---LENVFSGSGLVDM 496
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y KCGS++ A QVFE MP R+ SWN++I + +G EAA+ F +M++ P+S++
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE-SGLQPDSVS 555
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
+GVL+AC+H G V +G YF M+ Y + P+ +HY C++DL R GR EA L+ EM
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNE 455
P +PD ++W S+L+AC + + L E A+++F +E + AYV +S +YA+A W +
Sbjct: 616 PFEPDEIMWSSVLNAC-RIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 456 VGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGY 515
V ++K M ++G+ K P S +E++ H F + D THP ++I + +NE+ ++E GY
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734
Query: 516 LPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVT 574
PD S VDE + K +L+ HSERLA+AF L+++ G PI V KNLR C DCH
Sbjct: 735 KPDTSSVVQDVDEQM--KIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAI 792
Query: 575 KLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
KLIS I EI VRD +RFHHF +G CSC DYW
Sbjct: 793 KLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 17/381 (4%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
+ + + Q+HA ++ TN L + + +L Y + L+ A LF + +S +
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTN--PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACA--HTFSLCEGKQV 150
NTLI Y + + ++I L+ + M + P +TF VLKA H F+L G+Q+
Sbjct: 219 NTLITGYEKDGLYT-ESIHLF---LKMRQSGHQPSDFTFSGVLKAVVGLHDFAL--GQQL 272
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
HA + G+ D + N ++ FY+ + +F M E VS+NV++ SY +A ++
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 211 DTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN 269
+ +L F EM + D + +++S A L +L +G H + ++ + V
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI---LHVG 389
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
LVDMY KC E A+ +F+ +P R SW ++I G+ G A L F +M +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNL 448
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
+ TF VL A + G + + N+E G LVD++A+ G I++A+
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAV 507
Query: 390 NLVSEMPIKPDAVIWRSLLDA 410
+ EMP + +AV W +L+ A
Sbjct: 508 QVFEEMPDR-NAVSWNALISA 527
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 159/342 (46%), Gaps = 15/342 (4%)
Query: 72 ADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTF 131
D++ A LF W L+ YAR++ H +A +L++ M +PDH TF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNS-HFDEAFKLFR-QMCRSSSCTLPDHVTF 150
Query: 132 PFVLKACAHTFSLCEGKQVHAQLLKLGYESDT--RICNSLIHFYATCGCLDMALKIFQNM 189
+L C QVHA +KLG++++ + N L+ Y LD+A +F+ +
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGM 248
EK V++N ++ Y + G + ++ +F +M + H P +T V+ A GL +LG
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFS 308
HA + + D V ++D Y K + + +F+ MP D S+N +I +S
Sbjct: 271 QLHALSVT---TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS-ACNHRGMVNEGLMYFDMMTKEYNVEP 367
+ EA+L +FFR ++ F + F +LS A N + ++ + +
Sbjct: 328 QADQYEASL-HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD--- 383
Query: 368 RLEHYG-CLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ H G LVD++A+ +EA + +P + V W +L+
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALI 424
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 12/241 (4%)
Query: 162 DTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML 221
+T N++I + G + A +F M +++ V+W +++ Y R FD A K+F +M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 222 KLHD---PDGYTMQSVISACAGLGALSLGMWAHAYVMK-KCDKNVAADVLVNTCLVDMYC 277
+ PD T +++ C + HA+ +K D N + V+ L+ YC
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF--LTVSNVLLKSYC 195
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
+ L++A +FE +P +D ++N++I G+ G ++ F +M + P+ TF
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM-RQSGHQPSDFTFS 254
Query: 338 GVLSACN--HRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
GVL A H + + L + T ++ + + + ++D +++ R+ E L EM
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTG-FSRDASVGNQ--ILDFYSKHDRVLETRMLFDEM 311
Query: 396 P 396
P
Sbjct: 312 P 312
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/585 (35%), Positives = 330/585 (56%), Gaps = 20/585 (3%)
Query: 31 GIITMSHLKQIHAQTLRTIDTTN-----HPQALFLYSRILHYYSSLADLNYATRLFHHFG 85
GI+ + L +++A+ +D + L ++ +++ Y+ + L A +LF
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
+ +S+ W ++ Y + + +A+ LY M + P+ +T + A A +
Sbjct: 179 EKDSYSWTAMVTGYVKK-DQPEEALVLYSLMQRVPNSR--PNIFTVSIAVAAAAAVKCIR 235
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYV 205
GK++H +++ G +SD + +SL+ Y CGC+D A IF + EK VSW M+D Y
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 206 RAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
++ + +F E++ P+ YT V++ACA L LG H Y+ + V
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-----VGF 350
Query: 265 D--VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFR 322
D ++ LVDMY KCG++E A+ V + P D+ SW S+I G + +G+ + AL YF
Sbjct: 351 DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 323 MVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARA 382
++K P+ +TFV VLSAC H G+V +GL +F +T+++ + +HY CLVDL AR+
Sbjct: 411 LLK-SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 383 GRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVL 442
GR ++ +++SEMP+KP +W S+L C +++L EE A+++F+IE YV
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTY-GNIDLAEEAAQELFKIEPEN-PVTYVT 527
Query: 443 LSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKF 502
++ +YA+A +W E G +RK M + GVTK+PG S EI H F A DT+HP I +F
Sbjct: 528 MANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEF 587
Query: 503 LNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFK 562
L E+ +K++ GY+P S L D + K+ L HSE+LA+AF +L++ G I+VFK
Sbjct: 588 LRELRKKMKEEGYVPATSLV-LHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFK 646
Query: 563 NLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
NLR C DCH K IS+I +I VRD RFH F++G CSC DYW
Sbjct: 647 NLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 165/374 (44%), Gaps = 54/374 (14%)
Query: 84 FGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVV------PDHYTFPFVLKA 137
F PN ++ R AN +AI++ L+ E + P T+ +++
Sbjct: 36 FFNPNHEDGGVVVERLCR-ANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQV 94
Query: 138 CAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSW 197
C+ T +L EGK+VH + G+ I N L+ YA CG L A K+F M + SW
Sbjct: 95 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW 154
Query: 198 NVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYT-----------------------MQSV 234
NVMV+ Y G + A K+F EM + D Y+ MQ V
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMT---EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 235 ISACAGLGALSL-------------GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGS 281
++ + +S+ G H ++++ + +D ++ + L+DMY KCG
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR---AGLDSDEVLWSSLMDMYGKCGC 268
Query: 282 LEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV-KIEKFVPNSITFVGVL 340
++ A+ +F+++ +DV SW S+I + + F +V E+ PN TF GVL
Sbjct: 269 IDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER--PNEYTFAGVL 326
Query: 341 SACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPD 400
+AC G MT+ +P LVD++ + G I+ A ++V P KPD
Sbjct: 327 NACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPD 384
Query: 401 AVIWRSLLDACCKQ 414
V W SL+ C +
Sbjct: 385 LVSWTSLIGGCAQN 398
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 327/610 (53%), Gaps = 47/610 (7%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADL--NYATRLFHHFGKPNSF 90
I ++ +KQIH LR Q+ ++ ++++ + L YA R+ N F
Sbjct: 60 INLNQIKQIHGHVLRK----GLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
+W +IR YA +AI +Y M +EE+ P +TF +LKAC L G+Q
Sbjct: 116 LWTAVIRGYAIEGKFD-EAIAMYGCMR---KEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
HAQ +L + N++I Y C +D A K+F M E+ +SW ++ +Y R G
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 211 DTALKVF------------------------GEMLKLHD--------PDGYTMQSVISAC 238
+ A ++F E L+ D D T+ ISAC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
A LGA A + +K + + V++ + L+DMY KCG++E A VF M ++V
Sbjct: 292 AQLGASKYADRA-VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
+++S+ILG + HG+A+ AL F MV + PN++TFVG L AC+H G+V++G FD
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDS 410
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
M + + V+P +HY C+VDL R GR+QEAL L+ M ++P +W +LL A C+ +
Sbjct: 411 MYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA-CRIHNNP 469
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS-LI 477
E+ E A+ +FE+E + G Y+LLS +YASA W V +RKL+ +KG+ K P S ++
Sbjct: 470 EIAEIAAEHLFELEPDII-GNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Query: 478 EIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLR 537
+ +G H+FF G+ HP S I L E+ E+L +GY PD S D + + K+ L
Sbjct: 529 DKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPY-DVSDNAKRLILI 587
Query: 538 LHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFK 597
H+E+LA+AF LL + I + KNLR+C DCHK +L S + II+RD RFHHF+
Sbjct: 588 QHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFR 647
Query: 598 DGTCSCMDYW 607
G CSC D+W
Sbjct: 648 SGDCSCGDFW 657
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/612 (34%), Positives = 341/612 (55%), Gaps = 57/612 (9%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHH--FGKPNSFMWNTLI 96
K++HA L T P++ +L + + +Y+S ++ A +LF + ++ W TL+
Sbjct: 26 KELHA-VLTTSGLKKAPRS-YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLL 83
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
+++R + K + M + V D + + CA L +Q H +K
Sbjct: 84 SSFSRYG----LLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
+G + ++CN+L+ Y CG + +IF+ + EKS VSW V++D+ V+ + +V
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 217 FGEM------------------------LKL---------HDPDGYTMQSVISACAGLGA 243
F EM L+L H + T+ S++SACA G
Sbjct: 200 FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 244 LSLGMWAHAYVMKK----CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
L +G W H Y +KK ++ DV+V T LVDMY KCG+++ + VF M R+V +
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVT 319
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
WN++ G +MHGK +D F +M++ K P+ +TF VLSAC+H G+V+EG F +
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPQMIREVK--PDDLTFTAVLSACSHSGIVDEGWRCFHSL 377
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ Y +EP+++HY C+VDL RAG I+EA L+ EMP+ P+ V+ SLL +C VE
Sbjct: 378 -RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVH-GKVE 435
Query: 420 LGEEMAKQVFEIEGSVCSGAY-VLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
+ E + +++ ++ S + Y +L+S +Y + R + LR + +G+ K PG S I
Sbjct: 436 IAERIKRELIQM--SPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIY 493
Query: 479 IDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDET---IDGKKST 535
++ H F +GD +HP++++IY LNE+ E++ S GY+PD SG LV + ++ K+
Sbjct: 494 VNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSG--LVSHSEGDLEEKEQA 551
Query: 536 LRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHH 595
L HSE+LA+ FGLL ++P P+ VFKNLR+C DCH K++S +Y+ EII+RDR RFH
Sbjct: 552 LCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQ 611
Query: 596 FKDGTCSCMDYW 607
FK G+CSC DYW
Sbjct: 612 FKGGSCSCSDYW 623
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 132/320 (41%), Gaps = 46/320 (14%)
Query: 133 FVLKACAHTFSLCEGKQVHAQLLKLGYESDTR--ICNSLIHFYATCGCLDMALKIFQN-- 188
+L+ CAH L GK++HA L G + R + N+L FYA+ G + A K+F
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 189 MSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLG 247
+SEK V W ++ S+ R G ++K+F EM + + D ++ + CA L L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 248 MWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG--------------------------- 280
H +K V V V L+DMY KCG
Sbjct: 131 QQGHGVAVK---MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTV 187
Query: 281 ----SLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
LE ++VF MP R+ +W ++ G+ G L+ MV N +T
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 337 VGVLSACNHRGMVNEG------LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
+LSAC G + G + +MM E + LVD++A+ G I ++N
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 391 LVSEMPIKPDAVIWRSLLDA 410
+ M K + V W +L
Sbjct: 308 VFRLMR-KRNVVTWNALFSG 326
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 320/573 (55%), Gaps = 16/573 (2%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+QIH ++L+ N + + + ++ Y+ LN ++F + + WN++I A
Sbjct: 435 QQIHGESLKLGIDLN----VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
ARS +A+ + ++ + TF VL A + GKQ+H LK
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQK---LNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE-VSWNVMVDSYVRAGEFDTALKVF 217
+ N+LI Y CG +D KIF M+E+ + V+WN M+ Y+ AL +
Sbjct: 548 IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLV 607
Query: 218 GEMLKLHDP-DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
ML+ D + +V+SA A + L GM HA ++ C + +DV+V + LVDMY
Sbjct: 608 WFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC---LESDVVVGSALVDMY 664
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCG L+ A + F MP R+ SWNS+I G++ HG+ E AL F M + P+ +TF
Sbjct: 665 SKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTF 724
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
VGVLSAC+H G++ EG +F+ M+ Y + PR+EH+ C+ D+ RAG + + + + +MP
Sbjct: 725 VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP 784
Query: 397 IKPDAVIWRSLLDACCKQDA-SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNE 455
+KP+ +IWR++L ACC+ + ELG++ A+ +F++E YVLL +YA+ RW +
Sbjct: 785 MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN-YVLLGNMYAAGGRWED 843
Query: 456 VGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGY 515
+ RK M D V K+ G S + + H F AGD +HP ++ IYK L E++ K+ GY
Sbjct: 844 LVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGY 903
Query: 516 LPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPG-MPIRVFKNLRVCSDCHKVT 574
+P +G L D + K+ L HSE+LA+AF L R +PIR+ KNLRVC DCH
Sbjct: 904 VPQ-TGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAF 962
Query: 575 KLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
K IS I +II+RD RFHHF+DG CSC D+W
Sbjct: 963 KYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 184/411 (44%), Gaps = 23/411 (5%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
++L + +++ Y D A ++F N W ++ Y+R+ HK + L
Sbjct: 36 VYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD--- 92
Query: 118 LMMEEEVVPDHYTFPFVLKACAH--TFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M++E + + Y F VL+AC + + G+Q+H + KL Y D + N LI Y
Sbjct: 93 -MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 176 C-GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQS 233
C G + AL F ++ K+ VSWN ++ Y +AG+ +A ++F M P YT S
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKN-VAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
+++ L + + +M K+ + D+ V + LV + K GSL A++VF +M
Sbjct: 212 LVTTACSLTEPDVRLLEQ--IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
R+ + N +++G E A F M + P S +V +LS+ + E
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES--YVILLSSFPEYSLAEEV 327
Query: 353 LMYFDMMTKEYNVEPRLEHY-----GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSL 407
+ + + L + LV+++A+ G I +A + M K D+V W S+
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK-DSVSWNSM 386
Query: 408 LDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS-RWNEVG 457
+ + +E E + G++ L+S L + AS +W ++G
Sbjct: 387 ITGLDQNGCFIEAVERYKSMR---RHDILPGSFTLISSLSSCASLKWAKLG 434
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 18/370 (4%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
+++ Y+ + A R+F+ +S WN++I ++ +A+E YK+M +
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI-EAVERYKSMR---RHD 410
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
++P +T L +CA G+Q+H + LKLG + + + N+L+ YA G L+
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGE-FDTALKVFGEMLKLHDP-DGYTMQSVISACAGL 241
KIF +M E +VSWN ++ + R+ A+ F + + T SV+SA + L
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN-SW 300
LG H +K N+A + L+ Y KCG ++ +++F RM R N +W
Sbjct: 531 SFGELGKQIHGLALK---NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTW 587
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
NS+I G+ + ALD + M++ + + +S + VLSA + G M +
Sbjct: 588 NSMISGYIHNELLAKALDLVWFMLQTGQRL-DSFMYATVLSAFASVATLERG-MEVHACS 645
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
+E + LVD++++ GR+ AL + MP++ ++ W S++ +
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQ---- 700
Query: 421 GEEMAKQVFE 430
GEE A ++FE
Sbjct: 701 GEE-ALKLFE 709
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 168/375 (44%), Gaps = 18/375 (4%)
Query: 44 QTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSA 103
Q + TI + LF+ S ++ ++ L+YA ++F+ N+ N L+ R
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ- 287
Query: 104 NHKHQAIELYKAMMLMMEEEVVPDHYTF---PFVLKACAHTFSLCEGKQVHAQLLKLGY- 159
+A +L+ M M++ V P+ Y F + A L +G++VH ++ G
Sbjct: 288 KWGEEATKLFMDMNSMID--VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
+ I N L++ YA CG + A ++F M++K VSWN M+ + G F A++ +
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 220 MLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M + HD P +T+ S +S+CA L LG H +K + +V V+ L+ +Y
Sbjct: 406 M-RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK---LGIDLNVSVSNALMTLYA 461
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSII--LGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
+ G L +++F MP D SWNSII L S EA + + +K N IT
Sbjct: 462 ETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL--NRIT 519
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
F VLSA + G + K N+ L+ + + G + + S M
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Query: 396 PIKPDAVIWRSLLDA 410
+ D V W S++
Sbjct: 579 AERRDNVTWNSMISG 593
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 165/366 (45%), Gaps = 24/366 (6%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
I Y+ + + YA F NS WN++I Y+++ + + A ++ +M +
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR-SAFRIFSSMQY---DG 201
Query: 124 VVPDHYTF-PFVLKACAHT---FSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
P YTF V AC+ T L E Q+ + K G +D + + L+ +A G L
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVIS- 236
A K+F M ++ V+ N ++ VR + A K+F +M + D P+ Y + ++S
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSS 317
Query: 237 ----ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
+ A L G H +V+ V V + LV+MY KCGS+ A++VF M
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITT--GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
+D SWNS+I G +G A++ + M + +P S T + LS+C G
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCASLKWAKLG 434
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
K ++ + L+ L+A G + E + S MP + D V W S++ A
Sbjct: 435 QQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALA 492
Query: 413 KQDASV 418
+ + S+
Sbjct: 493 RSERSL 498
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 34/324 (10%)
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H++L K + D +CN+LI+ Y G A K+F M ++ VSW +V Y R GE
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 211 DTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSL--GMWAHAYVMKKCDKNVAADVL 267
AL +M+K + Y SV+ AC +G++ + G H + K + A D +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK---LSYAVDAV 140
Query: 268 VNTCLVDMYCKC-GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI 326
V+ L+ MY KC GS+ A F + ++ SWNSII +S G +A F M +
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM-QY 199
Query: 327 EKFVPNSITFVG-VLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDL------- 378
+ P TF V +AC+ L D+ E + ++ G L DL
Sbjct: 200 DGSRPTEYTFGSLVTTACS--------LTEPDVRLLE-QIMCTIQKSGLLTDLFVGSGLV 250
Query: 379 --FARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEG--S 434
FA++G + A + ++M + +AV L+ +Q + GEE K ++
Sbjct: 251 SAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQ----KWGEEATKLFMDMNSMID 305
Query: 435 VCSGAYVLLSKLYASASRWNEVGL 458
V +YV+L + S EVGL
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGL 329
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 321/561 (57%), Gaps = 17/561 (3%)
Query: 41 IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYA 100
+HA L++I + + + + +L+ Y+ L A ++F + + W TLI Y+
Sbjct: 82 VHAHILQSIFRHD----IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 101 RSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYE 160
+ + A+ + M+ P+ +T V+KA A C G Q+H +K G++
Sbjct: 138 QH-DRPCDALLFFNQMLRF---GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193
Query: 161 SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM 220
S+ + ++L+ Y G +D A +F + +++VSWN ++ + R + AL++F M
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 221 LK-LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
L+ P ++ S+ AC+ G L G W HAY++K +K VA L+DMY K
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA---FAGNTLLDMYAKS 310
Query: 280 GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
GS+ A+++F+R+ RDV SWNS++ ++ HG + A+ +F M ++ PN I+F+ V
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEISFLSV 369
Query: 340 LSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKP 399
L+AC+H G+++EG Y+++M K+ + P HY +VDL RAG + AL + EMPI+P
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 400 DAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLL 459
A IW++LL+AC + + ELG A+ VFE++ G +V+L +YAS RWN+ +
Sbjct: 429 TAAIWKALLNAC-RMHKNTELGAYAAEHVFELDPD-DPGPHVILYNIYASGGRWNDAARV 486
Query: 460 RKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDY 519
RK M + GV K+P CS +EI+ H F A D HP+ E+I + E+ K++ +GY+PD
Sbjct: 487 RKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDT 546
Query: 520 SGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISS 579
S +V ++ L+ HSE++A+AF LLN+ PG I + KN+RVC DCH KL S
Sbjct: 547 SHV-IVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASK 605
Query: 580 IYNVEIIVRDRARFHHFKDGT 600
+ EIIVRD RFHHFKD +
Sbjct: 606 VVGREIIVRDTNRFHHFKDAS 626
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 153/294 (52%), Gaps = 10/294 (3%)
Query: 120 MEEEVVP-DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+E +P D + +LK C L +G+ VHA +L+ + D + N+L++ YA CG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISA 237
L+ A K+F+ M ++ V+W ++ Y + AL F +ML+ + P+ +T+ SVI A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
A G H + + KC ++V V + L+D+Y + G ++ AQ VF+ + R+
Sbjct: 171 AAAERRGCCGHQLHGFCV-KC--GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
SWN++I G + E AL+ F M++ + F P+ ++ + AC+ G + +G
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHA 286
Query: 358 MMTKEYNVEPRLEHYG-CLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
M K + E + G L+D++A++G I +A + + K D V W SLL A
Sbjct: 287 YMIK--SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTA 337
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 342/643 (53%), Gaps = 91/643 (14%)
Query: 44 QTLRTIDTTNHPQALFLYS----RILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
+TLRT+ + + L S +++ Y+SL D+ A ++F + N + N +IR+Y
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG- 158
+ + E K M V PDHYTFP VLKAC+ + ++ G+++H K+G
Sbjct: 116 VNNGFYG----EGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171
Query: 159 ------------------YESDTRIC------------NSLIHFYATCGCLDMALKI--- 185
+ S+ R+ NSL+ YA D AL++
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 186 ----------------------------------FQNMSEKSEVSWNVMVDSYVRAGEFD 211
F M +KS VSWNVM+ Y++
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 212 TALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
A++++ M +PD ++ SV+ AC ALSLG H Y+ +K + ++L+
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK---KLIPNLLLEN 348
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
L+DMY KCG LE A+ VFE M RDV SW ++I + G+ A+ F ++ + V
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLV 407
Query: 331 PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
P+SI FV L+AC+H G++ EG F +MT Y + PRLEH C+VDL RAG+++EA
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 391 LVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASA 450
+ +M ++P+ +W +LL A C+ + ++G A ++F++ SG YVLLS +YA A
Sbjct: 468 FIQDMSMEPNERVWGALLGA-CRVHSDTDIGLLAADKLFQLAPEQ-SGYYVLLSNIYAKA 525
Query: 451 SRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL 510
RW EV +R +M KG+ K PG S +E++ + H F GD +HP+S++IY+ L+ + +K+
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 511 ESMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGLLNSR-----PGMPIRVFKNL 564
+ +GY+PD A H V+E + K++ L +HSE+LAI F L+N++ IR+ KNL
Sbjct: 586 KELGYVPDSESALHDVEE--EDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643
Query: 565 RVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
R+C DCH KLIS I + EII+RD RFH F+ G CSC DYW
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/549 (38%), Positives = 305/549 (55%), Gaps = 22/549 (4%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMM 120
++ I+ Y+ ++ A +LF + F W ++ Y ++ +A EL+ M
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN-RMVEEARELFDKM---- 307
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
P+ + A + E ++ +L + + N++I YA CG +
Sbjct: 308 -----PERNEVSW--NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKIS 360
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP-DGYTMQSVISACA 239
A +F M ++ VSW M+ Y ++G AL++F +M + + + S +S CA
Sbjct: 361 EAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
+ AL LG H ++K V L+ MYCKCGS+E A +F+ M +D+ S
Sbjct: 421 DVVALELGKQLHGRLVKG---GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
WN++I G+S HG E AL FF +K E P+ T V VLSAC+H G+V++G YF M
Sbjct: 478 WNTMIAGYSRHGFGEVAL-RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
T++Y V P +HY C+VDL RAG +++A NL+ MP +PDA IW +LL A + + E
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS-RVHGNTE 595
Query: 420 LGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEI 479
L E A ++F +E SG YVLLS LYAS+ RW +VG LR M DKGV K PG S IEI
Sbjct: 596 LAETAADKIFAMEPE-NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEI 654
Query: 480 DGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRL 538
H F GD HP+ ++I+ FL E+D +++ GY+ S H V+E + K+ +R
Sbjct: 655 QNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEE--EEKERMVRY 712
Query: 539 HSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKD 598
HSERLA+A+G++ G PIRV KNLRVC DCH K ++ I II+RD RFHHFKD
Sbjct: 713 HSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKD 772
Query: 599 GTCSCMDYW 607
G+CSC DYW
Sbjct: 773 GSCSCGDYW 781
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 159/354 (44%), Gaps = 37/354 (10%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
Y N A R+F + +S +N +I Y R+ EL + + M E D
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE-----FELARKLFDEMPER---D 125
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
++ ++K +L + ++ L ++ E D N+++ YA GC+D A +F
Sbjct: 126 LVSWNVMIKGYVRNRNLGKARE----LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 188 NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLG 247
M EK++VSWN ++ +YV+ + + A +F + + + S G
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLF------KSRENWALVSWNCLLGGFVKKKKI 235
Query: 248 MWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGF 307
+ A + D DV+ ++ Y + G ++ A+Q+F+ P +DV +W +++ G+
Sbjct: 236 VEARQFF----DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGY 291
Query: 308 SMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEP 367
+ E A + F +M + N +++ +L+ G V M +M + ++V P
Sbjct: 292 IQNRMVEEARELFDKMPE-----RNEVSWNAMLA-----GYVQGERM--EMAKELFDVMP 339
Query: 368 --RLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ + ++ +A+ G+I EA NL +MP K D V W +++ + S E
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFE 392
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 71/316 (22%)
Query: 128 HYTFPFVLK-------ACAHTFSLCEGKQVHAQ------LLKLGYESDTRICNSLIHFYA 174
HYT LK A+ SL Q Q LLK G +SD + N I Y
Sbjct: 17 HYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYM 75
Query: 175 TCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSV 234
G + AL++F+ M S VS+N M+ Y+R GEF+ A K+F EM P+
Sbjct: 76 RTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM-----PE------- 123
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
D++ ++ Y + +L A+++FE MP
Sbjct: 124 -----------------------------RDLVSWNVMIKGYVRNRNLGKARELFEIMPE 154
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
RDV SWN+++ G++ +G + A F RM + N +++ +LSA + E M
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPE-----KNDVSWNALLSAYVQNSKMEEACM 209
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
F ++E L + CL+ F + +I EA M ++ D V W +++ +
Sbjct: 210 LFK--SRE---NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQS 263
Query: 415 DASVELGEEMAKQVFE 430
E A+Q+F+
Sbjct: 264 GKIDE-----ARQLFD 274
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/583 (36%), Positives = 324/583 (55%), Gaps = 25/583 (4%)
Query: 31 GIITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSF 90
G+ K +H Q L+T + + L L Y+ L D++ A ++F+ K +
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGL----LQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
W+ +I + ++ ++A++L+ + M E VVP+ +T +L CA G+Q+
Sbjct: 315 PWSFMIARFCQNG-FCNEAVDLF---IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQL 370
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H ++K+G++ D + N+LI YA C +D A+K+F +S K+EVSWN ++ Y GE
Sbjct: 371 HGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEG 430
Query: 211 DTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN 269
A +F E L+ T S + ACA L ++ LG+ H +K N A V V+
Sbjct: 431 GKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT---NNAKKVAVS 487
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
L+DMY KCG ++ AQ VF M DV SWN++I G+S HG AL ++K
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL-RILDIMKDRDC 546
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
PN +TF+GVLS C++ G++++G F+ M +++ +EP LEHY C+V L R+G++ +A+
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
L+ +P +P +IWR++L A Q+ E A+++ +I YVL+S +YA
Sbjct: 607 KLIEGIPYEPSVMIWRAMLSASMNQNNE-EFARRSAEEILKINPKD-EATYVLVSNMYAG 664
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEK 509
A +W V +RK M + GV K+PG S IE G H F G + HP + I L ++ K
Sbjct: 665 AKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMK 724
Query: 510 LESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMP-----IRVFKNL 564
GY+PD + A L+D + K L +HSERLA+A+GL+ MP I + KNL
Sbjct: 725 ATRAGYVPDRN-AVLLDMDDEEKDKRLWVHSERLALAYGLVR----MPSSRNRILIMKNL 779
Query: 565 RVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
R+CSDCH K+ISSI ++++RD RFHHF G CSC D+W
Sbjct: 780 RICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 166/353 (47%), Gaps = 11/353 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F+ + +++ YS ++ A +F + +W ++ Y + + +++L M +
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG-YFEDSLKLLSCMRM 240
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+P++YTF LKA + K VH Q+LK Y D R+ L+ Y G
Sbjct: 241 ---AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD 297
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK-LHDPDGYTMQSVISA 237
+ A K+F M + V W+ M+ + + G + A+ +F M + P+ +T+ S+++
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
CA LG H V+K D+ V+ L+D+Y KC ++ A ++F + ++
Sbjct: 358 CAIGKCSGLGEQLHGLVVK---VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE 414
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
SWN++I+G+ G+ A F ++ + V +TF L AC ++ G+
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSV-TEVTFSSALGACASLASMDLGVQVHG 473
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+ K N + ++ L+D++A+ G I+ A ++ +EM D W +L+
Sbjct: 474 LAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISG 524
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 25/374 (6%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K IH L+ + LF + +L+ Y A LF + N+ + TL +
Sbjct: 69 KAIHCDILKKGSCLD----LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQG 124
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
YA I LY + + E+ P +T L +C +H+ ++KLG
Sbjct: 125 YA-----CQDPIGLY-SRLHREGHELNPHVFTSFLKLFVSLDKAEIC--PWLHSPIVKLG 176
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
Y+S+ + +LI+ Y+ CG +D A +F+ + K V W +V YV G F+ +LK+
Sbjct: 177 YDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLS 236
Query: 219 EM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M + P+ YT + + A GLGA H ++K C D V L+ +Y
Sbjct: 237 CMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC---YVLDPRVGVGLLQLYT 293
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF-VPNSITF 336
+ G + A +VF MP DV W+ +I F +G A+D F RM E F VPN T
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR--EAFVVPNEFTL 351
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY--GCLVDLFARAGRIQEALNLVSE 394
+L+ C G ++ K V L+ Y L+D++A+ ++ A+ L +E
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVK---VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 395 MPIKPDAVIWRSLL 408
+ K + V W +++
Sbjct: 409 LSSK-NEVSWNTVI 421
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 27/310 (8%)
Query: 115 AMMLMMEEEVVP--DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHF 172
A+ L + ++P D + + +L+ C K +H +LK G D N L++
Sbjct: 34 ALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNA 93
Query: 173 YATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQ 232
Y G AL +F M E++ VS+ + Y ++ E H+ + +
Sbjct: 94 YVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREG---HELNPHVFT 150
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
S + L + W H+ ++K ++ V L++ Y CGS++ A+ VFE +
Sbjct: 151 SFLKLFVSLDKAEICPWLHSPIVK---LGYDSNAFVGAALINAYSVCGSVDSARTVFEGI 207
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
+D+ W I+ + +G E +L +++ F+PN+ TF L A + G
Sbjct: 208 LCKDIVVWAGIVSCYVENGYFEDSLK-LLSCMRMAGFMPNNYTFDTALKA-------SIG 259
Query: 353 LMYFD--------MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIW 404
L FD ++ Y ++PR+ L+ L+ + G + +A + +EMP K D V W
Sbjct: 260 LGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMP-KNDVVPW 316
Query: 405 RSLLDACCKQ 414
++ C+
Sbjct: 317 SFMIARFCQN 326
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 311/553 (56%), Gaps = 14/553 (2%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
LF+ ++++ Y+ L ++F + WN++I+AY + +AI L++ M
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN-EQPLRAISLFQEMR 340
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG-YESDTRICNSLIHFYATC 176
L + PD T + + + + V L+ G + D I N+++ YA
Sbjct: 341 L---SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 177 GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSV 234
G +D A +F + +SWN ++ Y + G A++++ M + + + T SV
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
+ AC+ GAL GM H ++K + DV V T L DMY KCG LE A +F ++P
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKN---GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
+ WN++I HG E A+ F M+ E P+ ITFV +LSAC+H G+V+EG
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
F+MM +Y + P L+HYGC+VD++ RAG+++ AL + M ++PDA IW +LL AC +
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC-RV 632
Query: 415 DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGC 474
+V+LG+ ++ +FE+E G +VLLS +YASA +W V +R + KG+ K PG
Sbjct: 633 HGNVDLGKIASEHLFEVEPEHV-GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGW 691
Query: 475 SLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKS 534
S +E+D F+ G+ THP E++Y+ L + KL+ +GY+PD+ L D D K+
Sbjct: 692 SSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFV-LQDVEDDEKEH 750
Query: 535 TLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFH 594
L HSERLAIAF L+ + IR+FKNLRVC DCH VTK IS I EIIVRD RFH
Sbjct: 751 ILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFH 810
Query: 595 HFKDGTCSCMDYW 607
HFK+G CSC DYW
Sbjct: 811 HFKNGVCSCGDYW 823
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 205/438 (46%), Gaps = 24/438 (5%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K +HA+ + + Q + + +++++ Y L ++ A F H + + WN +I
Sbjct: 71 KCLHARLV----VSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y R+ N + I + + M+ + PD+ TFP VLKAC ++ +G ++H LK G
Sbjct: 127 YGRAGNSS-EVIRCFS--LFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFG 180
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ D + SLIH Y+ + A +F M + SWN M+ Y ++G AL +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 219 EMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
+ + D T+ S++SAC G + G+ H+Y +K + +++ V+ L+D+Y +
Sbjct: 241 GLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIK---HGLESELFVSNKLIDLYAE 294
Query: 279 CGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVG 338
G L Q+VF+RM RD+ SWNSII + ++ + A+ F M ++ + P+ +T +
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLIS 353
Query: 339 VLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
+ S + G + ++ + +V ++A+ G + A + + +P
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-N 412
Query: 399 PDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGL 458
D + W +++ + + E E + E EG + + +S L A + + G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIE--MYNIMEEEGEIAANQGTWVSVLPACS----QAGA 466
Query: 459 LRKLMSDKGVTKKPGCSL 476
LR+ M G K G L
Sbjct: 467 LRQGMKLHGRLLKNGLYL 484
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 172/355 (48%), Gaps = 14/355 (3%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ + ++H YS + A LF + WN +I Y +S N K +A+ L +
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK-EALTLSNGLR 243
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
M D T +L AC G +H+ +K G ES+ + N LI YA G
Sbjct: 244 AM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVIS 236
L K+F M + +SWN ++ +Y + A+ +F EM L PD T+ S+ S
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
+ LG + + ++K D+ + +V MY K G ++ A+ VF +P D
Sbjct: 357 ILSQLGDIRACRSVQGFTLRK--GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V SWN+II G++ +G A A++ + M + + N T+V VL AC+ G + +G+
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
+ K + + L D++ + GR+++AL+L ++P + ++V W +L+ AC
Sbjct: 475 GRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI-AC 526
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 22/339 (6%)
Query: 143 SLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVD 202
+L K +HA+L+ + I L++ Y G + +A F ++ + +WN+M+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 203 SYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK 260
Y RAG ++ F + PD T SV+ AC + G H +K
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALK---F 179
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYF 320
DV V L+ +Y + ++ A+ +F+ MP RD+ SWN++I G+ G A+ AL
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 321 FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
+ ++ S+T V +LSAC G N G+ K + +E L L+DL+A
Sbjct: 240 NGLRAMD-----SVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYA 293
Query: 381 RAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAY 440
GR+++ + M ++ D + W S++ A EL E+ + + + S
Sbjct: 294 EFGRLRDCQKVFDRMYVR-DLISWNSIIKA-------YELNEQPLRAISLFQEMRLSRIQ 345
Query: 441 VLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEI 479
L + AS +++G +R S +G T + G L +I
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 327/577 (56%), Gaps = 21/577 (3%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNT 94
+ LK++H +L+ N A + + Y+ L+YA R+FH WN
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVA----NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 95 LIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
LI +A+S + + A + M ++PD +T +L AC+ SL GK+VH +
Sbjct: 467 LIGGHAQSNDPRLS----LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
++ E D + S++ Y CG L +F M +KS VSWN ++ Y++ G D AL
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 215 KVFGEMLKLHDPD--GYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
VF +M+ L+ G +M V AC+ L +L LG AHAY +K ++ D + L
Sbjct: 583 GVFRQMV-LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED---DAFIACSL 638
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
+DMY K GS+ + +VF + + SWN++I+G+ +HG A+ A+ F M + P+
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRT-GHNPD 697
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+TF+GVL+ACNH G+++EGL Y D M + ++P L+HY C++D+ RAG++ +AL +V
Sbjct: 698 DLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV 757
Query: 393 SE-MPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+E M + D IW+SLL +C + ++E+GE++A ++FE+E YVLLS LYA
Sbjct: 758 AEEMSEEADVGIWKSLLSSC-RIHQNLEMGEKVAAKLFELEPEKPEN-YVLLSNLYAGLG 815
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
+W +V +R+ M++ + K GCS IE++ F G+ E+I + ++ K+
Sbjct: 816 KWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS 875
Query: 512 SMGYLPD-YSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDC 570
MGY PD S H + E + K LR HSE+LA+ +GL+ + G IRV+KNLR+C DC
Sbjct: 876 KMGYRPDTMSVQHDLSE--EEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDC 933
Query: 571 HKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
H KLIS + EI+VRD RFHHFK+G CSC DYW
Sbjct: 934 HNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 14/293 (4%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L +RI+ Y+ + + +F N F WN +I +Y+R+ + + +E + M+
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD-EVLETFIEMI-- 178
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
+++PDH+T+P V+KACA + G VH ++K G D + N+L+ FY T G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-----PDGYTMQSV 234
AL++F M E++ VSWN M+ + G + + + GEM++ + PD T+ +V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 235 ISACAGLGALSLGMWAHAYVMK-KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
+ CA + LG H + +K + DK ++++N L+DMY KCG + AQ +F+
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDK----ELVLNNALMDMYSKCGCITNAQMIFKMNN 354
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVK-IEKFVPNSITFVGVLSACNH 345
++V SWN+++ GFS G D +M+ E + +T + + C H
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 7/296 (2%)
Query: 52 TNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIE 111
T + +F+ + ++ +Y + + A +LF + N WN++IR ++ + + +
Sbjct: 216 TGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLL 275
Query: 112 LYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIH 171
L + M + +PD T VL CA + GK VH +KL + + + N+L+
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 172 FYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD---PDG 228
Y+ CGC+ A IF+ + K+ VSWN MV + G+ V +ML + D
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 229 YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV 288
T+ + + C L H Y +K + + LV V Y KCGSL AQ+V
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLK---QEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 289 FERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN 344
F + + VNSWN++I G + +LD +M KI +P+S T +LSAC+
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACS 507
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 13/283 (4%)
Query: 133 FVLKACAHTFSLCEGKQVHAQLLK--LGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
+L+A + G+++H QL+ +D +C +I YA CG D + +F +
Sbjct: 89 LLLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGM 248
K+ WN ++ SY R +D L+ F EM+ D PD +T VI ACAG+ + +G+
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFS 308
H V+K + DV V LV Y G + A Q+F+ MP R++ SWNS+I FS
Sbjct: 208 AVHGLVVK---TGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 309 MHGKAEAALDYFFRMVKIE---KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
+G +E + M++ F+P+ T V VL C + G K +
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK-LRL 323
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ L L+D++++ G I A ++ +M + V W +++
Sbjct: 324 DKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMV 365
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
D ++ T ++ MY CGS + ++ VF+ + +++ WN++I +S + + L+ F M+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
+P+ T+ V+ AC V GL ++ K VE LV + G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG-NALVSFYGTHGF 237
Query: 385 IQEALNLVSEMPIKPDAVIWRSLL----DACCKQDASVELGEEMAKQVFEIEGSVCSGAY 440
+ +AL L MP + + V W S++ D +++ + LGE M + +G+
Sbjct: 238 VTDALQLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG---DGAFMPDVA 293
Query: 441 VLLSKLYASASRWNEVGL 458
L++ L A R E+GL
Sbjct: 294 TLVTVLPVCA-REREIGL 310
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/519 (37%), Positives = 304/519 (58%), Gaps = 47/519 (9%)
Query: 125 VPDHYTFPFVLKAC-AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC------- 176
+ DH VL++C A + S C Q HAQ+ KLGY + + S + Y C
Sbjct: 27 LTDHGMLKQVLESCKAPSNSKCV-LQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLAR 85
Query: 177 --------------------------GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
G +A K+ +N S+++ ++WN+M+ YVR ++
Sbjct: 86 RLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQY 145
Query: 211 DTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+ ALK ML D P+ ++ S ++ACA LG L W H+ ++ D + + ++
Sbjct: 146 EEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMI---DSGIELNAIL 202
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
++ LVD+Y KCG + +++VF + DV+ WN++I GF+ HG A A+ F M + E
Sbjct: 203 SSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM-EAEH 261
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
P+SITF+G+L+ C+H G++ EG YF +M++ ++++P+LEHYG +VDL RAGR++EA
Sbjct: 262 VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEA 321
Query: 389 LNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
L+ MPI+PD VIWRSLL + + + ELGE + + + + SG YVLLS +Y+
Sbjct: 322 YELIESMPIEPDVVIWRSLLSS-SRTYKNPELGEIAIQNLSKAK----SGDYVLLSNIYS 376
Query: 449 SASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDE 508
S +W +R+LMS +G+ K G S +E G+ H F AGDT+H +++ IYK L + +
Sbjct: 377 STKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQ 436
Query: 509 KLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCS 568
K +S G++ D + L+D + + K+ L HSE+LA+A+ +L S PG IR+ KN+R+CS
Sbjct: 437 KTKSQGFVSD-TDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCS 495
Query: 569 DCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
DCH K +S + N II+RDR RFH F+DG CSC DYW
Sbjct: 496 DCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
I+ + + A ++ + N WN +I Y R+ ++ +A++ K M+ +
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYE-EALKALKNMLSFTD-- 160
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
+ P+ ++F L ACA L K VH+ ++ G E + + ++L+ YA CG + +
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLG 242
++F ++ WN M+ + G A++VF EM H PD T +++ C+ G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWN 301
L G + ++ ++ + +VD+ + G ++ A ++ E MP DV W
Sbjct: 281 LLEEGKEYFGLMSRRF--SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWR 338
Query: 302 SII 304
S++
Sbjct: 339 SLL 341
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 308/551 (55%), Gaps = 17/551 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
++ + + YS + + LF F KP+ +N +I Y S ++ L+K +ML
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT-SNGETELSLSLFKELML 315
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
T ++ H + +H LK + S + +L Y+
Sbjct: 316 ---SGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISA 237
++ A K+F EKS SWN M+ Y + G + A+ +F EM K P+ T+ ++SA
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
CA LGALSLG W H V + + + V+T L+ MY KCGS+ A+++F+ M ++
Sbjct: 430 CAQLGALSLGKWVHDLVR---STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
+WN++I G+ +HG+ + AL+ F+ M+ P +TF+ VL AC+H G+V EG F+
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLN-SGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
M Y EP ++HY C+VD+ RAG +Q AL + M I+P + +W +LL AC +
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC-RIHKD 604
Query: 418 VELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
L +++++FE++ G +VLLS ++++ + + +R+ + + K PG +LI
Sbjct: 605 TNLARTVSEKLFELDPDNV-GYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 478 EIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTL 536
EI H F +GD +HP+ ++IY+ L +++ K+ GY P+ A H V+E + ++ +
Sbjct: 664 EIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEE--EERELMV 721
Query: 537 RLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHF 596
++HSERLAIAFGL+ + PG IR+ KNLRVC DCH VTKLIS I I+VRD RFHHF
Sbjct: 722 KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHF 781
Query: 597 KDGTCSCMDYW 607
KDG CSC DYW
Sbjct: 782 KDGVCSCGDYW 792
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 170/355 (47%), Gaps = 15/355 (4%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L L S I+ Y + A ++F + ++ +WNT+I Y ++ + ++I++++
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV-ESIQVFRD-- 210
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
L+ E D T +L A A L G Q+H+ K G S + I Y+ CG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQS--VI 235
+ M +F+ + V++N M+ Y GE + +L +F E++ G ++S ++
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML----SGARLRSSTLV 326
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
S G L L H Y +K N + V+T L +Y K +E A+++F+ P +
Sbjct: 327 SLVPVSGHLMLIYAIHGYCLK---SNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
+ SWN++I G++ +G E A+ F M K E F PN +T +LSAC G ++ G
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILSACAQLGALSLGKWV 442
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
D++ + + E + L+ ++A+ G I EA L M K + V W +++
Sbjct: 443 HDLV-RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISG 495
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 196/464 (42%), Gaps = 42/464 (9%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++SHL Q HAQ I + L +++ S L + YA +F +P+ F++N
Sbjct: 32 SISHLAQTHAQ----IILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFN 87
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
L+R ++ + + H ++ ++ L ++ P+ T+ F + A + G+ +H Q
Sbjct: 88 VLMRGFSVNES-PHSSLSVFA--HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
+ G +S+ + ++++ Y ++ A K+F M EK + WN M+ Y + + +
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 214 LKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
++VF +++ D T+ ++ A A L L LGM H+ K + V T
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK---TGCYSHDYVLTG 261
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYF---------FR 322
+ +Y KCG +++ +F D+ ++N++I G++ +G+ E +L F R
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 323 MVKIEKFVPNS---------------ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEP 367
+ VP S F+ S V L + K ++ P
Sbjct: 322 SSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 368 R--LEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQDASVELGE 422
L + ++ + + G ++A++L EM P+ V +L AC Q ++ LG+
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA-QLGALSLGK 440
Query: 423 EMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDK 466
+ V + L +YA E L LM+ K
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 9/185 (4%)
Query: 49 IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQ 108
+ +T+ ++++ + ++ Y+ + A RLF K N WNT+I Y Q
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG----Q 501
Query: 109 AIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL-KLGYESDTRICN 167
E M+ + P TF VL AC+H + EG ++ ++ + G+E +
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 168 SLIHFYATCGCLDMALKIFQNMS-EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP 226
++ G L AL+ + MS E W ++ + + + A V ++ +L DP
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL-DP 620
Query: 227 D--GY 229
D GY
Sbjct: 621 DNVGY 625
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/549 (37%), Positives = 309/549 (56%), Gaps = 15/549 (2%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMM 120
++ ++H Y ++ A +LF N W T+I ++ +A++L+K M+
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQN-ERSGEALDLFKNMLRCC 220
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
+ F V+ ACA+ + G QVH ++KLG+ + + SLI FYA C +
Sbjct: 221 ---IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACA 239
+ K+F + W ++ Y + + AL +F ML+ P+ T S +++C+
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
LG L G H +K + D V LV MY G++ A VF ++ + + S
Sbjct: 338 ALGTLDWGKEMHGVAVKL---GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS 394
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
WNSII+G + HG+ + A F +M+++ K P+ ITF G+LSAC+H G + +G F M
Sbjct: 395 WNSIIVGCAQHGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 360 TKEYN-VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
+ N ++ +++HY C+VD+ R G+++EA L+ M +KP+ ++W +LL AC + + V
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSAC-RMHSDV 512
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
+ GE+ A +F ++ S S AYVLLS +YASA RW+ V LR M G+ KKPG S +
Sbjct: 513 DRGEKAAAAIFNLD-SKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVV 571
Query: 479 IDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRL 538
I G HEFF+GD P IY+ L + EKL+ +GY PDY A L D + K+ L
Sbjct: 572 IRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSA-LHDVEDEQKEEMLWY 628
Query: 539 HSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKD 598
HSERLAIAFGL+N+ G + V KNLRVC DCH V KLIS + EI++RD RFHHFK+
Sbjct: 629 HSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKN 688
Query: 599 GTCSCMDYW 607
GTCSC DYW
Sbjct: 689 GTCSCGDYW 697
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 167/359 (46%), Gaps = 25/359 (6%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
LY++++ Y+ L A LF + WN++I + + A++L+ M
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGD-MNTAVKLFDEMP-- 124
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
E VV ++ ++ C + + + +++ Q+ DT NS++H Y G +
Sbjct: 125 -ERSVV----SWTAMVNGCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKV 175
Query: 180 DMALKIFQNMSEKSEVSWNVMV---DSYVRAGEFDTALKVFGEMLK-LHDPDGYTMQSVI 235
D ALK+F+ M K+ +SW M+ D R+GE AL +F ML+ VI
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGE---ALDLFKNMLRCCIKSTSRPFTCVI 232
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
+ACA A +G+ H ++K + V+ L+ Y C + +++VF+ +
Sbjct: 233 TACANAPAFHMGIQVHGLIIK---LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
V W +++ G+S++ K E AL F M++ +PN TF L++C+ G ++ G
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLR-NSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
+ K +E LV +++ +G + +A+++ ++ K V W S++ C +
Sbjct: 349 HGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQH 405
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 312/547 (57%), Gaps = 12/547 (2%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
+ +L YS LN A +LF + W L Y S H+ +AI+L+K M+ E
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR-EAIDLFKKMV---E 205
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
V PD Y VL AC H L G+ + + ++ + ++ + +L++ YA CG ++
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAG 240
A +F +M EK V+W+ M+ Y +++F +ML+ + PD +++ +S+CA
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCAS 325
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
LGAL LG W + + + ++ + L+DMY KCG++ +VF+ M +D+
Sbjct: 326 LGALDLGEWGISLIDRH---EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
N+ I G + +G + + F + K+ P+ TF+G+L C H G++ +GL +F+ ++
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKL-GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
Y ++ +EHYGC+VDL+ RAG + +A L+ +MP++P+A++W +LL C + +L
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC-RLVKDTQL 500
Query: 421 GEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEID 480
E + K++ +E +G YV LS +Y+ RW+E +R +M+ KG+ K PG S IE++
Sbjct: 501 AETVLKELIALE-PWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELE 559
Query: 481 GVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHS 540
G HEF A D +HP S+ IY L ++ ++ MG++P D + K+ L HS
Sbjct: 560 GKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFV-FFDVEEEEKERVLGYHS 618
Query: 541 ERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGT 600
E+LA+A GL+++ G IRV KNLRVC DCH+V KLIS I EI+VRD RFH F +G+
Sbjct: 619 EKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGS 678
Query: 601 CSCMDYW 607
CSC DYW
Sbjct: 679 CSCNDYW 685
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHP--QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
T++HLKQIH + NH FL + +L Y+ LF H PN F+
Sbjct: 25 TVNHLKQIH------VSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 92 WNTLIRAYARSANHK-HQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
+N+LI + NH H+ ++L+ + + + + +TFP VLKAC S G +
Sbjct: 79 YNSLINGFVN--NHLFHETLDLF---LSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H+ ++K G+ D SL+ Y+ G L+ A K+F + ++S V+W + Y +G
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 211 DTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN 269
A+ +F +M+++ PD Y + V+SAC +G L G W Y+ + + + V
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME---EMEMQKNSFVR 250
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
T LV++Y KCG +E A+ VF+ M +D+ +W+++I G++ + + ++ F +M++ E
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENL 309
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
P+ + VG LS+C G ++ G ++ + + L L+D++A+ G +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQ 414
+ EM K D VI + + K
Sbjct: 369 EVFKEMKEK-DIVIMNAAISGLAKN 392
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/611 (34%), Positives = 320/611 (52%), Gaps = 53/611 (8%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
T++ K +HA ++ P L + +++ Y ++A ++F + W
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCP----LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
+++ A + AN + L + + PD + F ++KACA+ S+ G+QVH
Sbjct: 74 SVLTALNQ-ANLSGKT--LSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCH 130
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
+ Y +D + +SL+ YA CG L+ A +F ++ K+ +SW MV Y ++G + A
Sbjct: 131 FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 214 LKVFG-----------------------------------EMLKLHDPDGYTMQSVISAC 238
L++F E + + DP + S++ AC
Sbjct: 191 LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDP--LVLSSIVGAC 248
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
A L A G H V+ + V ++ L+DMY KC + A+ +F RM +RDV
Sbjct: 249 ANLAASIAGRQVHGLVIAL---GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
SW S+I+G + HG+AE AL + MV PN +TFVG++ AC+H G V +G F
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVS-HGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
MTK+Y + P L+HY CL+DL R+G + EA NL+ MP PD W +LL AC +Q
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG- 423
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
++G +A + Y+LLS +YASAS W +V R+ + + V K PG S +E
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Query: 479 IDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE-SMGYLPDYSGA-HLVDETIDGKKSTL 536
+ F+AG+T+HP EDI++ L +++E++ GY+PD S H +DE K+ L
Sbjct: 484 VRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDE--QEKEKLL 541
Query: 537 RLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHF 596
HSER A+A+GLL + PG PIR+ KNLRVC DCH V K IS I EIIVRD R+HHF
Sbjct: 542 FWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHF 601
Query: 597 KDGTCSCMDYW 607
K G CSC D+W
Sbjct: 602 KGGKCSCNDFW 612
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 10/230 (4%)
Query: 135 LKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE 194
L+ CA +L K +HA ++KLG + N+L++ Y CG AL++F M +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHA 252
++W ++ + +A L VF + PD + +++ ACA LG++ G H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 253 YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGK 312
+ + A D +V + LVDMY KCG L A+ VF+ + ++ SW +++ G++ G+
Sbjct: 130 HFIV---SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 313 AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
E AL+ FR++ ++ N ++ ++S G E F M +E
Sbjct: 187 KEEALE-LFRILPVK----NLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 337/578 (58%), Gaps = 21/578 (3%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNT 94
+ L+Q+HA + T + ++ L ++++ S + Y LF P+ F++N+
Sbjct: 22 VKQLQQVHAHLI----VTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNS 77
Query: 95 LIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
+I++ ++ H + Y+ M+ V P +YTF V+K+CA +L GK VH
Sbjct: 78 VIKSTSKLRLPLH-CVAYYRRML---SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHA 133
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+ G+ DT + +L+ FY+ CG ++ A ++F M EKS V+WN +V + + G D A+
Sbjct: 134 VVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAI 193
Query: 215 KVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
+VF +M + +PD T S++SACA GA+SLG W H Y++ + + +V + T L+
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII---SEGLDLNVKLGTALI 250
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
++Y +CG + A++VF++M +V +W ++I + HG + A++ F +M +PN+
Sbjct: 251 NLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNN 310
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+TFV VLSAC H G+V EG + MTK Y + P +EH+ C+VD+ RAG + EA +
Sbjct: 311 VTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
Query: 394 EMPIKPDAV---IWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASA 450
++ A +W ++L A CK + +LG E+AK++ +E G +V+LS +YA +
Sbjct: 371 QLDATGKATAPALWTAMLGA-CKMHRNYDLGVEIAKRLIALEPD-NPGHHVMLSNIYALS 428
Query: 451 SRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL 510
+ +EV +R M + K+ G S+IE++ + F GD +H ++ +IY++L + +
Sbjct: 429 GKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRC 488
Query: 511 ESMGYLP-DYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSD 569
+ +GY P H V+E + K+ LR HSE+LA+AFGLL + + I + KNLR+C D
Sbjct: 489 KEIGYAPVSEEVMHQVEE--EEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICED 545
Query: 570 CHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
CH K IS + N +I VRD+ RFHHF++G+CSC+DYW
Sbjct: 546 CHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 310/559 (55%), Gaps = 49/559 (8%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
+ N WN ++ + RS HK + K L PD T VL + + L
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL----GFCPDQVTVSSVLPSVGDSEMLN 269
Query: 146 EGKQVHAQLLKLGYESD-------------------------------TRICNSLIHFYA 174
G+ +H ++K G D +CN+ I +
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 175 TCGCLDMALKIFQNMSEKSE----VSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGY 229
G +D AL++F+ E++ VSW ++ + G+ AL++F EM + P+
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 230 TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVF 289
T+ S++ AC + AL G H + ++ ++ +V V + L+DMY KCG + ++Q VF
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRV---HLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 290 ERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMV 349
MP +++ WNS++ GFSMHGKA+ + F +++ + P+ I+F +LSAC G+
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT-RLKPDFISFTSLLSACGQVGLT 505
Query: 350 NEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLD 409
+EG YF MM++EY ++PRLEHY C+V+L RAG++QEA +L+ EMP +PD+ +W +LL+
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
Query: 410 ACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVT 469
+C Q+ +V+L E A+++F +E G YVLLS +YA+ W EV +R M G+
Sbjct: 566 SCRLQN-NVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLK 623
Query: 470 KKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDET 528
K PGCS I++ + AGD +HP+ + I + ++EI +++ G+ P+ A H V+E
Sbjct: 624 KNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEE- 682
Query: 529 IDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVR 588
++ L HSE+LA+ FGLLN+ G P++V KNLR+C DCH V K ISS EI +R
Sbjct: 683 -QEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIR 741
Query: 589 DRARFHHFKDGTCSCMDYW 607
D RFHHFKDG CSC D+W
Sbjct: 742 DTNRFHHFKDGICSCGDFW 760
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 185/443 (41%), Gaps = 87/443 (19%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
Q HA+ L++ + ++ ++++ YS+ N A + P + +++LI A
Sbjct: 36 QAHARILKSGAQNDG----YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
+ A Q+I ++ M ++PD + P + K CA + GKQ+H G
Sbjct: 92 TK-AKLFTQSIGVFSRMF---SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGL 147
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
+ D + S+ H Y CG + A K+F MS+K V+ + ++ +Y R G + +++ E
Sbjct: 148 DMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 220 M--------------------------------LKLHD----PDGYTMQSVISACAGLGA 243
M K+H PD T+ SV+ +
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 244 LSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG----------------------- 280
L++G H YV+K + + D V + ++DMY K G
Sbjct: 268 LNMGRLIHGYVIK---QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAY 324
Query: 281 ------------SLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+LE+ + E+ +V SW SII G + +GK AL+ FR +++
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALE-LFREMQVAG 383
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYG-CLVDLFARAGRIQE 387
PN +T +L AC + + G + + ++ H G L+D++A+ GRI
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINL 441
Query: 388 ALNLVSEMPIKPDAVIWRSLLDA 410
+ + + MP K + V W SL++
Sbjct: 442 SQIVFNMMPTK-NLVCWNSLMNG 463
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 140/323 (43%), Gaps = 47/323 (14%)
Query: 149 QVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG 208
Q HA++LK G ++D I LI Y+ C + A + Q++ + + S++ ++ + +A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 209 EFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
F ++ VF M H PD + + ++ CA L A +G H C + D
Sbjct: 96 LFTQSIGVFSRMFS-HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV---SCVSGLDMDA 151
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDV----------------------------- 297
V + MY +CG + A++VF+RM +DV
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 298 ------NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
SWN I+ GF+ G + A+ F+ + F P+ +T VL + M+N
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAV-VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
G + + K+ ++ + ++D++ ++G + ++L ++ + +A + + +
Sbjct: 271 GRLIHGYVIKQGLLKDKCV-ISAMIDMYGKSGHVYGIISLFNQFEMM-EAGVCNAYITGL 328
Query: 412 CKQ---DASVELGEEMAKQVFEI 431
+ D ++E+ E +Q E+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMEL 351
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 322/583 (55%), Gaps = 47/583 (8%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMM 120
++ ++ + + ++ A F + + WN++I + + + +A++++ M+
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG-YDLRALDIFSKML--R 271
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
+ + PD +T VL ACA+ LC GKQ+H+ ++ G++ + N+LI Y+ CG ++
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 181 MALK---------------------------------IFQNMSEKSEVSWNVMVDSYVRA 207
A + IF ++ ++ V+W M+ Y +
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 208 GEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
G + A+ +F M+ P+ YT+ +++S + L +LS G H +K + V
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE---IYSV 448
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMP-YRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
V+ L+ MY K G++ A + F+ + RD SW S+I+ + HG AE AL+ F M+
Sbjct: 449 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML- 507
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
+E P+ IT+VGV SAC H G+VN+G YFDMM + P L HY C+VDLF RAG +
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSK 445
QEA + +MPI+PD V W SLL A C+ +++LG+ A+++ +E SGAY L+
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSA-CRVHKNIDLGKVAAERLLLLEPE-NSGAYSALAN 625
Query: 446 LYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNE 505
LY++ +W E +RK M D V K+ G S IE+ H F D THP+ +IY + +
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685
Query: 506 IDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNL 564
I ++++ MGY+PD + H ++E + K+ LR HSE+LAIAFGL+++ +R+ KNL
Sbjct: 686 IWDEIKKMGYVPDTASVLHDLEEEV--KEQILRHHSEKLAIAFGLISTPDKTTLRIMKNL 743
Query: 565 RVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
RVC+DCH K IS + EIIVRD RFHHFKDG CSC DYW
Sbjct: 744 RVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 192/432 (44%), Gaps = 72/432 (16%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F ++ +L YS D++ F + +S W T+I Y ++ H+AI + M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY-KNIGQYHKAI---RVMGD 136
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC-- 176
M++E + P +T VL + A T + GK+VH+ ++KLG + + NSL++ YA C
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 177 -----------------------------GCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
G +D+A+ F+ M+E+ V+WN M+ + +
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 208 GEFDTALKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGMWAHAYVM---------- 255
G AL +F +ML+ L PD +T+ SV+SACA L L +G H++++
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 256 --------KKCDKNVAADVLVN------------TCLVDMYCKCGSLEIAQQVFERMPYR 295
+C A L+ T L+D Y K G + A+ +F + R
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
DV +W ++I+G+ HG A++ F MV + PNS T +LS + ++ G
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ- 414
K + + L+ ++A+AG I A + + D V W S++ A +
Sbjct: 436 HGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 415 --DASVELGEEM 424
+ ++EL E M
Sbjct: 495 HAEEALELFETM 506
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 269/445 (60%), Gaps = 10/445 (2%)
Query: 166 CNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH- 224
CN++I G + A ++F +M E+++ SW ++ + R G AL +F M K
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 225 DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEI 284
P T+ S++S CA L +L G HA +++ C +V DV V + L+ MY KCG L
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVR-CQFDV--DVYVASVLMTMYIKCGELVK 384
Query: 285 AQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN 344
++ +F+R P +D+ WNSII G++ HG E AL F M PN +TFV LSAC+
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 345 HRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIW 404
+ GMV EGL ++ M + V+P HY C+VD+ RAGR EA+ ++ M ++PDA +W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 405 RSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMS 464
SLL A C+ + +++ E AK++ EIE SG Y+LLS +YAS RW +V LRKLM
Sbjct: 505 GSLLGA-CRTHSQLDVAEFCAKKLIEIEPE-NSGTYILLSNMYASQGRWADVAELRKLMK 562
Query: 465 DKGVTKKPGCSLIEIDGVAHEFFAGD-TTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA- 522
+ V K PGCS E++ H F G +HP+ E I K L+E+D L GY PD S A
Sbjct: 563 TRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYAL 622
Query: 523 HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYN 582
H VDE + K ++L+ HSERLA+A+ LL G+PIRV KNLRVCSDCH K+IS +
Sbjct: 623 HDVDE--EEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKE 680
Query: 583 VEIIVRDRARFHHFKDGTCSCMDYW 607
EII+RD RFHHF++G CSC DYW
Sbjct: 681 REIILRDANRFHHFRNGECSCKDYW 705
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 11/269 (4%)
Query: 72 ADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTF 131
++ A R+F + N W T+I+ + R+ + +A++L+ +LM ++ V P T
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNG-FELEALDLF---ILMQKQGVRPTFPTL 334
Query: 132 PFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSE 191
+L CA SL GKQVHAQL++ ++ D + + L+ Y CG L + IF
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 192 KSEVSWNVMVDSYVRAGEFDTALKVFGEML--KLHDPDGYTMQSVISACAGLGALSLGMW 249
K + WN ++ Y G + ALKVF EM P+ T + +SAC+ G + G+
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL- 453
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFS 308
Y + V C+VDM + G A ++ + M D W S++
Sbjct: 454 -KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACR 512
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFV 337
H + + A ++++IE NS T++
Sbjct: 513 THSQLDVAEFCAKKLIEIEP--ENSGTYI 539
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 182/447 (40%), Gaps = 58/447 (12%)
Query: 32 IITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
I +S + +IH + + D+ + S + Y+++L + A +LF N
Sbjct: 24 ITHLSRIGKIH-EARKLFDSCDSKSISSWNSMVAGYFANLMPRD-ARKLFDEMPDRNIIS 81
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHT---------- 141
WN L+ Y ++ + E K LM E VV ++ ++K H
Sbjct: 82 WNGLVSGYMKNG----EIDEARKVFDLMPERNVV----SWTALVKGYVHNGKVDVAESLF 133
Query: 142 FSLCEGKQVHAQLLKLGYESDTRICN-----------------SLIHFYATCGCLDMALK 184
+ + E +V ++ +G+ D RI + S+IH G +D A +
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 185 IFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGAL 244
IF MSE+S ++W MV Y + D A K+F M + + +M +G +
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSML--------MGYV 245
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSII 304
G A + + V+ ++ + G + A++VF+ M R+ SW ++I
Sbjct: 246 QNGRIEDAEELFEVMP--VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 305 LGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK-EY 363
+G ALD F M K + P T + +LS C ++ G + + ++
Sbjct: 304 KIHERNGFELEALDLFILMQK-QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 364 NVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEE 423
+V+ + L+ ++ + G + ++ + P K D ++W S++ AS LGEE
Sbjct: 363 DVDVYVA--SVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGY----ASHGLGEE 415
Query: 424 MAKQVFE--IEGSVCSGAYVLLSKLYA 448
K E + GS ++ L A
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSA 442
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 30/262 (11%)
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP 226
N I + G + A K+F + KS SWN MV Y A K+F EM P
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-----P 75
Query: 227 DGYTMQSVISACAGL--GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEI 284
D +++IS GL G + G A K D +V+ T LV Y G +++
Sbjct: 76 D----RNIIS-WNGLVSGYMKNGEIDEAR--KVFDLMPERNVVSWTALVKGYVHNGKVDV 128
Query: 285 AQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP--NSITFVGVLSA 342
A+ +F +MP ++ SW +++GF G+ + A K+ + +P ++I ++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA-------CKLYEMIPDKDNIARTSMIHG 181
Query: 343 CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAV 402
G V+E FD M+ E + + +V + + R+ +A + MP K + V
Sbjct: 182 LCKEGRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE-V 235
Query: 403 IWRSLLDACCKQDASVELGEEM 424
W S+L Q+ +E EE+
Sbjct: 236 SWTSMLMGYV-QNGRIEDAEEL 256
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 110/282 (39%), Gaps = 58/282 (20%)
Query: 32 IITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
+ ++ H KQ+HAQ +R + +++ S ++ Y +L + +F F + M
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVD----VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN++I YA S +A++++ M L P+ TF L AC++
Sbjct: 400 WNSIISGYA-SHGLGEEALKVFCEMPL--SGSTKPNEVTFVATLSACSYA---------- 446
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS-----WNVMVDSYVR 206
G ++ LKI+++M V + MVD R
Sbjct: 447 -------------------------GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 207 AGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
AG F+ A+++ M +PD S++ AC L + + +++ +N +
Sbjct: 482 AGRFNEAMEMIDSMTV--EPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYI 539
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN-----SWNSI 303
L L +MY G ++ + M R V SW +
Sbjct: 540 L----LSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 205/552 (37%), Positives = 313/552 (56%), Gaps = 23/552 (4%)
Query: 67 YYSSLADLNYATRLFHHFGK-PNSFMWNTLIRAYARSANHKH--QAIELYKAMMLMMEEE 123
YYS L A +F+ + + WN++I AY + HK +A+ LYK M+ +
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQ---HKEGAKALALYKEMIF---KG 235
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM-- 181
D +T VL A L G+Q H +L+K G+ ++ + + LI FY+ CG D
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 182 -ALKIFQNMSEKSEVSWNVMVDSYVRAGEF-DTALKVFGEMLKL-HDPDGYTMQSVISAC 238
+ K+FQ + V WN M+ Y E + A+K F +M ++ H PD + V SAC
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAAD-VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
+ L + S H +K ++ ++ + VN L+ +Y K G+L+ A+ VF+RMP +
Sbjct: 356 SNLSSPSQCKQIHGLAIKS---HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNA 412
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
S+N +I G++ HG AL + RM+ PN ITFV VLSAC H G V+EG YF+
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLD-SGIAPNKITFVAVLSACAHCGKVDEGQEYFN 471
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
M + + +EP EHY C++DL RAG+++EA + MP KP +V W +LL A C++ +
Sbjct: 472 TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA-CRKHKN 530
Query: 418 VELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
+ L E A ++ ++ + + YV+L+ +YA A +W E+ +RK M K + KKPGCS I
Sbjct: 531 MALAERAANELMVMQ-PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Query: 478 EIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLR 537
E+ H F A D +HP ++ ++L E+ +K++ +GY+ D A + ++ +R
Sbjct: 590 EVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMR 649
Query: 538 L--HSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHH 595
L HSE+LA+AFGL+++R G + V KNLR+C DCH K +S++ EIIVRD RFH
Sbjct: 650 LGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHC 709
Query: 596 FKDGTCSCMDYW 607
FKDG CSC DYW
Sbjct: 710 FKDGKCSCGDYW 721
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 188/391 (48%), Gaps = 43/391 (10%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K +HA +++I + + +L + ++ YS L+YA F+ +PN F +N +++A
Sbjct: 28 KSLHALYVKSIVAS----STYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 99 YARSA------------------------NHKHQAIELYKAMML---MMEEEVVPDHYTF 131
YA+ + + A E + AM+L M + D +T
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 132 PFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSE 191
++ AC L KQ+H + G++S + + N+ + +Y+ G L A+ +F M E
Sbjct: 144 SGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 192 -KSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMW 249
+ EVSWN M+ +Y + E AL ++ EM+ K D +T+ SV++A L L G
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLE---IAQQVFERMPYRDVNSWNSIILG 306
H ++K + V + L+D Y KCG + +++VF+ + D+ WN++I G
Sbjct: 262 FHGKLIK---AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 307 FSMHGK-AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
+SM+ + +E A+ F +M +I P+ +FV V SAC++ ++ + K +
Sbjct: 319 YSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
R+ L+ L+ ++G +Q+A + MP
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 50/337 (14%)
Query: 133 FVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD------------ 180
+LK+ A L GK +HA +K S T + N ++ Y+ CG L
Sbjct: 14 LLLKSVAER-DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEP 72
Query: 181 -------------------MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML 221
+A ++F + + VS+N ++ Y A E A+ +F M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 222 KL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG 280
KL + DG+T+ +I+AC + L H + + + ++ VN V Y K G
Sbjct: 133 KLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSS---VNNAFVTYYSKGG 187
Query: 281 SLEIAQQVFERM-PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
L A VF M RD SWNS+I+ + H + AL + M+ + F + T V
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLASV 246
Query: 340 LSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGC-LVDLFARAG---RIQEALNLVSEM 395
L+A + G + + K + H G L+D +++ G + ++ + E+
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQN--SHVGSGLIDFYSKCGGCDGMYDSEKVFQEI 304
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIE 432
+ PD V+W +++ + EL EE K +++
Sbjct: 305 -LSPDLVVWNTMISGYSMNE---ELSEEAVKSFRQMQ 337
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 303/553 (54%), Gaps = 53/553 (9%)
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
+N +I Y ++ +A+E+ + M+ + D +T+P V++ACA L GKQVH
Sbjct: 254 YNAMISGYVNRGFYQ-EALEMVRRMV---SSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 152 AQLLK---LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG 208
A +L+ + D NSL+ Y CG D A IF+ M K VSWN ++ YV +G
Sbjct: 310 AYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 209 EFDTALKVFGEM------------------------LKLH--------DPDGYTMQSVIS 236
A +F EM LKL +P Y I
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 237 ACAGLGALSLGMWAHAYVMK-KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
+CA LGA G HA ++K D +++A L+ MY KCG +E A+QVF MP
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSA----GNALITMYAKCGVVEEARQVFRTMPCL 481
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
D SWN++I HG A+D + M+K + P+ IT + VL+AC+H G+V++G Y
Sbjct: 482 DSVSWNALIAALGQHGHGAEAVDVYEEMLK-KGIRPDRITLLTVLTACSHAGLVDQGRKY 540
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD 415
FD M Y + P +HY L+DL R+G+ +A +++ +P KP A IW +LL C +
Sbjct: 541 FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGC-RVH 599
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
++ELG A ++F + G Y+LLS ++A+ +W EV +RKLM D+GV K+ CS
Sbjct: 600 GNMELGIIAADKLFGLIPE-HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Query: 476 LIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDG-KKS 534
IE++ H F DT+HP++E +Y +L ++ +++ +GY+PD S L D DG K+
Sbjct: 659 WIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFV-LHDVESDGHKED 717
Query: 535 TLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFH 594
L HSE++A+AFGL+ PG IR+FKNLR C DCH + +S + +II+RDR RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFH 777
Query: 595 HFKDGTCSCMDYW 607
HF++G CSC ++W
Sbjct: 778 HFRNGECSCGNFW 790
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 191/474 (40%), Gaps = 107/474 (22%)
Query: 54 HPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY--------ARSANH 105
P+A L +R++ Y ++LNYA +LF +P+ T++ Y AR
Sbjct: 46 QPRAHIL-NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFE 104
Query: 106 KH----QAIELYKAMML-----------------MMEEEVVPDHYTFPFVLKACAHTFS- 143
K + +Y AM+ M E PD++TF VL A
Sbjct: 105 KAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADD 164
Query: 144 LCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC----LDMALKIFQNMSEKSEVSWNV 199
+ Q HA LK G T + N+L+ Y+ C L A K+F + EK E SW
Sbjct: 165 EKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTT 224
Query: 200 MVDSYVRAGEFDTA------------LKVFGEMLKLH---------------------DP 226
M+ YV+ G FD L + M+ + +
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
D +T SVI ACA G L LG HAYV+++ D + D LV +Y KCG + A+
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEAR 340
Query: 287 QVFERMPYRDVNSWNSIILGFSMHGK-AEAALDY-------------------------- 319
+FE+MP +D+ SWN+++ G+ G EA L +
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 320 ---FFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLV 376
F +K E F P F G + +C G G Y + K + L L+
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALI 459
Query: 377 DLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD---ASVELGEEMAKQ 427
++A+ G ++EA + MP D+V W +L+ A + +V++ EEM K+
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 142/319 (44%), Gaps = 41/319 (12%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
KQ+HA LR D + H F S + YY + A +F + WN L+
Sbjct: 306 KQVHAYVLRREDFSFH----FDNSLVSLYYKC-GKFDEARAIFEKMPAKDLVSWNALLSG 360
Query: 99 YARSANHKHQAIELYKAM--------MLMM--------------------EEEVVPDHYT 130
Y S+ H +A ++K M M+M+ E P Y
Sbjct: 361 YV-SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 131 FPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
F +K+CA + C G+Q HAQLLK+G++S N+LI YA CG ++ A ++F+ M
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMW 249
VSWN ++ + + G A+ V+ EMLK PD T+ +V++AC+ G + G
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS-WNSIILGFS 308
+ AD L+D+ C+ G A+ V E +P++ W +++ G
Sbjct: 540 YFDSMETVYRIPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 597
Query: 309 MHGKAE---AALDYFFRMV 324
+HG E A D F ++
Sbjct: 598 VHGNMELGIIAADKLFGLI 616
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 213/590 (36%), Positives = 330/590 (55%), Gaps = 37/590 (6%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHY--YSSLADLNYATRLFHHFGKPNSF 90
++ S +KQ+ + L T H Q+ FL SR+L S DL++A ++F + KP +
Sbjct: 14 VSFSQIKQLQSHFL----TAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTN 69
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVV---PDHYTFPFVLKACAHTFSLCEG 147
WN +IR +A S+ H A Y++M+ D T F LKACA
Sbjct: 70 DWNAIIRGFAGSS-HPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
Q+H Q+ + G +D+ +C +L+ Y+ G L A K+F M + SWN ++ V
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 208 GEFDTALKVFGEMLKLHDPDG-----YTMQSVISACAGLGALSLGMWA-HAYVMKKCDKN 261
A++++ M + +G T+ + + AC+ LG + G H Y
Sbjct: 189 NRASEAMELYKRM----ETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND----- 239
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMP-YRDVNSWNSIILGFSMHGKAEAALDYF 320
+V+V+ +DMY KCG ++ A QVFE+ + V +WN++I GF++HG+A AL+ F
Sbjct: 240 ---NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIF 296
Query: 321 FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
++ + P+ ++++ L+AC H G+V GL F+ M + VE ++HYGC+VDL +
Sbjct: 297 DKL-EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLS 354
Query: 381 RAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAY 440
RAGR++EA +++ M + PD V+W+SLL A + + VE+ E ++++ E+ G G +
Sbjct: 355 RAGRLREAHDIICSMSMIPDPVLWQSLLGAS-EIYSDVEMAEIASREIKEM-GVNNDGDF 412
Query: 441 VLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIY 500
VLLS +YA+ RW +VG +R M K V K PG S IE G HEF+ D +H + +IY
Sbjct: 413 VLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIY 472
Query: 501 KFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLL---NSRPGMP 557
+ ++EI K+ GY+ +G L D + K++ L HSE+LA+A+GL+ + P
Sbjct: 473 EKIDEIRFKIREDGYVAQ-TGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESP 531
Query: 558 IRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
+RV NLR+C DCH V K IS IY EIIVRDR RFH FKDG+CSC D+W
Sbjct: 532 VRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/493 (41%), Positives = 286/493 (58%), Gaps = 15/493 (3%)
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCE-GKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
MM + PD + P K+CA S C+ G+ VH +K GY++D + +SL+ YA CG
Sbjct: 107 MMAGNLRPDDHVLPSATKSCA-ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCG 165
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
+ A K+F M +++ V+W+ M+ Y + GE + AL +F E L + + Y+ SVIS
Sbjct: 166 EIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVIS 225
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
CA L LG H +K + + V + LV +Y KCG E A QVF +P ++
Sbjct: 226 VCANSTLLELGRQIHGLSIKS---SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN 282
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ WN+++ ++ H + ++ F RM K+ PN ITF+ VL+AC+H G+V+EG YF
Sbjct: 283 LGIWNAMLKAYAQHSHTQKVIELFKRM-KLSGMKPNFITFLNVLNACSHAGLVDEGRYYF 341
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
D M KE +EP +HY LVD+ RAGR+QEAL +++ MPI P +W +LL +C
Sbjct: 342 DQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHK- 399
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
+ EL A +VFE+ G V SG ++ LS YA+ R+ + RKL+ D+G K+ G S
Sbjct: 400 NTELAAFAADKVFEL-GPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSW 458
Query: 477 IEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDG--KKS 534
+E H F AG+ H KS++IY+ L E+ E++E GY+ D S V +DG K
Sbjct: 459 VEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTS---YVLREVDGDEKNQ 515
Query: 535 TLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFH 594
T+R HSERLAIAFGL+ PIRV KNLRVC DCH K +S IIVRD RFH
Sbjct: 516 TIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFH 575
Query: 595 HFKDGTCSCMDYW 607
F+DG CSC DYW
Sbjct: 576 RFEDGKCSCNDYW 588
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 7/278 (2%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS 193
+L + A T S +G Q+H ++K G + N+LI+FY+ + + F++ +KS
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 194 EVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHA 252
+W+ ++ + + +L+ +M+ + PD + + S +CA L +G H
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 253 YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGK 312
MK ADV V + LVDMY KCG + A+++F+ MP R+V +W+ ++ G++ G+
Sbjct: 141 LSMK---TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 313 AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY 372
E AL + F+ E N +F V+S C + ++ G + K
Sbjct: 198 NEEAL-WLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGS 256
Query: 373 GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
LV L+++ G + A + +E+P+K + IW ++L A
Sbjct: 257 S-LVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKA 292
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 134/271 (49%), Gaps = 17/271 (6%)
Query: 52 TNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIE 111
T + +F+ S ++ Y+ ++ YA ++F + N W+ ++ YA+ ++ +A+
Sbjct: 145 TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE-EALW 203
Query: 112 LYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIH 171
L+K + E + + Y+F V+ CA++ L G+Q+H +K ++S + + +SL+
Sbjct: 204 LFKEALF---ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 172 FYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYT 230
Y+ CG + A ++F + K+ WN M+ +Y + +++F M L P+ T
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 231 MQSVISACAGLGALSLGMWAHAYV----MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
+V++AC+ G + G + + ++ DK+ A+ LVDM + G L+ A
Sbjct: 321 FLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYAS-------LVDMLGRAGRLQEAL 373
Query: 287 QVFERMPYRDVNS-WNSIILGFSMHGKAEAA 316
+V MP S W +++ ++H E A
Sbjct: 374 EVITNMPIDPTESVWGALLTSCTVHKNTELA 404
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 314/556 (56%), Gaps = 31/556 (5%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F Y+ +L Y + A F ++ WNT+I YAR + +A EL+ +MM
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEME-KARELFYSMM- 182
Query: 119 MMEEEVVPDHYTFPFV----LKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA 174
+ EV + ++ L+ +H F + + V A ++I Y
Sbjct: 183 -EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAW-------------TAMITGYM 228
Query: 175 TCGCLDMALKIFQNMS-EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQ 232
+++A +F++M+ K+ V+WN M+ YV + LK+F ML+ P+ +
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
S + C+ L AL LG H V K + DV T L+ MYCKCG L A ++FE M
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKS---TLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
+DV +WN++I G++ HG A+ AL F M+ K P+ ITFV VL ACNH G+VN G
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMID-NKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
+ YF+ M ++Y VEP+ +HY C+VDL RAG+++EAL L+ MP +P A ++ +LL AC
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC- 463
Query: 413 KQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKP 472
+ +VEL E A+++ ++ +G YV L+ +YAS +RW +V +RK M + V K P
Sbjct: 464 RVHKNVELAEFAAEKLLQLNSQNAAG-YVQLANIYASKNRWEDVARVRKRMKESNVVKVP 522
Query: 473 GCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDETIDG 531
G S IEI H F + D HP+ + I+K L E+++K++ GY P+ A H V+E +
Sbjct: 523 GYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEE--EQ 580
Query: 532 KKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRA 591
K+ L HSE+LA+AFG + G I+VFKNLR+C DCHK K IS I EIIVRD
Sbjct: 581 KEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTT 640
Query: 592 RFHHFKDGTCSCMDYW 607
RFHHFKDG+CSC DYW
Sbjct: 641 RFHHFKDGSCSCGDYW 656
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 140/354 (39%), Gaps = 56/354 (15%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F ++I+ D++ A R+FH N+ WN+L+ ++ + +A +L+
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF---- 116
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+ +P+ TF + N ++ Y
Sbjct: 117 -----DEIPEPDTFSY---------------------------------NIMLSCYVRNV 138
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISA 237
+ A F M K SWN M+ Y R GE + A ++F M++ ++ M S
Sbjct: 139 NFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE 198
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY-RD 296
C L S H + + VA T ++ Y K +E+A+ +F+ M ++
Sbjct: 199 CGDLEKAS-----HFFKVAPVRGVVAW-----TAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ +WN++I G+ + + E L F M++ E PNS L C+ + G
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLE-EGIRPNSSGLSSALLGCSELSALQLGRQIH 307
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+++K + + L+ ++ + G + +A L M K D V W +++
Sbjct: 308 QIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISG 359
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 39/299 (13%)
Query: 198 NVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKK 257
N ++ VR+G+ D AL+VF M + T S++ + S M AH
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGM---RAKNTITWNSLLIGISK--DPSRMMEAHQLF--- 116
Query: 258 CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAAL 317
D+ D ++ Y + + E AQ F+RMP++D SWN++I G++ G+ E A
Sbjct: 117 -DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175
Query: 318 DYFFRMVKIEKFVPNSITF----VGVLSACNH-------RGMVNEGLMYF---------- 356
+ F+ M++ + N++ G L +H RG+V M
Sbjct: 176 ELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 357 -DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACC 412
+ M K+ V L + ++ + R ++ L L M I+P++ S L C
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 413 KQDASVELGEEMAKQVFEIEGSVCSGAYVLLS--KLYASASRWNEVGLLRKLMSDKGVT 469
+ A ++LG ++ + V + ++C+ L S +Y + L ++M K V
Sbjct: 296 ELSA-LQLGRQIHQIV--SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 195/551 (35%), Positives = 310/551 (56%), Gaps = 11/551 (1%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F+ +++ Y L A +LF + + WN+LI Y+ + + E+ MM+
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYS-GRGYLGKCFEVLSRMMI 125
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
E P+ TF ++ AC + S EG+ +H ++K G + ++ N+ I++Y G
Sbjct: 126 S-EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGD 184
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISA 237
L + K+F+++S K+ VSWN M+ +++ G + L F ++ H+PD T +V+ +
Sbjct: 185 LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRS 244
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
C +G + L H +M + + + T L+D+Y K G LE + VF + D
Sbjct: 245 CEDMGVVRLAQGIHGLIMFG---GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
+W +++ ++ HG A+ +F MV P+ +TF +L+AC+H G+V EG YF+
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHY-GISPDHVTFTHLLNACSHSGLVEEGKHYFE 360
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
M+K Y ++PRL+HY C+VDL R+G +Q+A L+ EMP++P + +W +LL A C+
Sbjct: 361 TMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA-CRVYKD 419
Query: 418 VELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
+LG + A+++FE+E YV+LS +Y+++ W + +R LM KG+ + GCS I
Sbjct: 420 TQLGTKAAERLFELEPRDGRN-YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Query: 478 EIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES-MGYLPDYSGAHLVDETIDGKKSTL 536
E H+F GD +HP+SE I K L EI +K++S MGY L D D K+ +
Sbjct: 479 EHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFV-LHDVGEDVKEEMI 537
Query: 537 RLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHF 596
HSE++A+AFGLL P PI + KNLR+C DCH+ K IS I II+RD RFHHF
Sbjct: 538 NQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHF 597
Query: 597 KDGTCSCMDYW 607
DG+CSC DYW
Sbjct: 598 LDGSCSCSDYW 608
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 310/573 (54%), Gaps = 28/573 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+QIHA +R +N + + I++ Y L A R+F L+
Sbjct: 204 RQIHAHVIRAGLCSNTS----IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y ++ +A + K + ++ E V D + F VLKACA L GKQ+HA + KLG
Sbjct: 260 YTQAG----RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
ES+ + L+ FY C + A + FQ + E ++VSW+ ++ Y + +F+ A+K F
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 219 EMLKLHDP--DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+ + + +T S+ AC+ L ++G HA +K+ ++ + L+ MY
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR---SLIGSQYGESALITMY 432
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCG L+ A +VFE M D+ +W + I G + +G A AL F +MV PNS+TF
Sbjct: 433 SKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC-GMKPNSVTF 491
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
+ VL+AC+H G+V +G D M ++YNV P ++HY C++D++AR+G + EAL + MP
Sbjct: 492 IAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
+PDA+ W+ L C ++ELGE +++ +++ +G YVL LY A +W E
Sbjct: 552 FEPDAMSWKCFLSGCWTHK-NLELGEIAGEELRQLDPEDTAG-YVLPFNLYTWAGKWEEA 609
Query: 457 GLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYL 516
+ KLM+++ + K+ CS I+ G H F GD HP++++IY+ L E D +E
Sbjct: 610 AEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFME----- 664
Query: 517 PDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLN--SRPGMPIRVFKNLRVCSDCHKVT 574
+ + ++ L HSERLAIAFGL++ PI+VFKNLR C DCH+
Sbjct: 665 -----GDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFA 719
Query: 575 KLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
K +S + EI++RD RFHHFK+G CSC DYW
Sbjct: 720 KHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 26/384 (6%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++SH + +H + I+ ++ L + +L Y L A +LF + N+
Sbjct: 98 SLSHGRLLHDRMRMGIENP----SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRT 153
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
T+I AYA +A+ L+ M+ ++ P + +LK+ + +L G+Q+HA
Sbjct: 154 TMISAYAEQGILD-KAVGLFSGMLASGDK---PPSSMYTTLLKSLVNPRALDFGRQIHAH 209
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
+++ G S+T I +++ Y CG L A ++F M+ K V+ ++ Y +AG A
Sbjct: 210 VIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDA 269
Query: 214 LKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
LK+F +++ + D + V+ ACA L L+LG HA V K + ++V V T L
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK---LGLESEVSVGTPL 326
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
VD Y KC S E A + F+ + + SW++II G+ + E A+ F + + N
Sbjct: 327 VDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILN 386
Query: 333 SITFV------GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQ 386
S T+ VL+ CN G V+ + ++ +Y L+ ++++ G +
Sbjct: 387 SFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG-------ESALITMYSKCGCLD 439
Query: 387 EALNLVSEMPIKPDAVIWRSLLDA 410
+A N V E PD V W + +
Sbjct: 440 DA-NEVFESMDNPDIVAWTAFISG 462
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 10/311 (3%)
Query: 106 KHQAI-ELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTR 164
KH+ + E ++ + M + V Y++ + +AC SL G+ +H + +++G E+ +
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSV 118
Query: 165 IC-NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
+ N ++ Y C L+ A K+F MSE + VS M+ +Y G D A+ +F ML
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 224 HD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
D P +++ + AL G HA+V++ + ++ + T +V+MY KCG L
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIR---AGLCSNTSIETGIVNMYVKCGWL 235
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
A++VF++M + + +++G++ G+A AL F +V E +S F VL A
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV-TEGVEWDSFVFSVVLKA 294
Query: 343 CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAV 402
C +N G + K +E + LVD + + + A E+ +P+ V
Sbjct: 295 CASLEELNLGKQIHACVAK-LGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDV 352
Query: 403 IWRSLLDACCK 413
W +++ C+
Sbjct: 353 SWSAIISGYCQ 363
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 309/555 (55%), Gaps = 24/555 (4%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ YS +N A ++F + WN +I + A + +A++ + MM+E
Sbjct: 148 LVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH-AGYGSKALDTFG----MMQEA 202
Query: 124 VV---PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYE--SDTRICNSLIHFYATCGC 178
+ PD +T +LKAC+ T + GKQ+H L++ G+ S I SL+ Y CG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP-DGYTMQSVISA 237
L A K F + EK+ +SW+ ++ Y + GEF A+ +F + +L+ D + + S+I
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
A L G A +K + VL +VDMY KCG ++ A++ F M +DV
Sbjct: 323 FADFALLRQGKQMQALAVK-LPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
SW +I G+ HG + ++ F+ M++ P+ + ++ VLSAC+H GM+ EG F
Sbjct: 380 ISWTVVITGYGKHGLGKKSVRIFYEMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
+ + + ++PR+EHY C+VDL RAGR++EA +L+ MPIKP+ IW++LL + C+
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL-SLCRVHGD 497
Query: 418 VELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
+ELG+E+ K + I+ YV++S LY A WNE G R+L + KG+ K+ G S +
Sbjct: 498 IELGKEVGKILLRIDAK-NPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Query: 478 EIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL-ESMGYLPDYSGAH-LVDETIDGKKST 535
EI+ H F +G+ +HP + I + L E + +L E +GY+ Y H L D + K+
Sbjct: 557 EIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV--YGLKHELHDIDDESKEEN 614
Query: 536 LRLHSERLAIAFGLLN---SRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRAR 592
LR HSE+LAI L ++ G IRVFKNLRVC DCH+ K +S I + +VRD R
Sbjct: 615 LRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVR 674
Query: 593 FHHFKDGTCSCMDYW 607
FH F+DG CSC DYW
Sbjct: 675 FHSFEDGCCSCGDYW 689
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 7/289 (2%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS 193
+L+ C +G QVH LLK G + N LI Y C MA K+F +M E++
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 194 EVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHA 252
VSW+ ++ +V G+ +L +F EM + P+ +T + + AC L AL G+ H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 253 YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGK 312
+ +K V V LVDMY KCG + A++VF R+ R + SWN++I GF G
Sbjct: 132 FCLK---IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 313 AEAALDYFFRMVKIE-KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE-YNVEPRLE 370
ALD F M + K P+ T +L AC+ GM+ G + + ++
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 371 HYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
G LVDL+ + G + A ++ K + W SL+ ++ VE
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKT-MISWSSLILGYAQEGEFVE 296
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/567 (36%), Positives = 304/567 (53%), Gaps = 17/567 (2%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+ IHA + TT + + + + Y + A +LF + + W T+I
Sbjct: 317 RDIHAYVI----TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y + +AI+ Y+ +M ++ V PD T VL ACA L G ++H +K
Sbjct: 373 YEYNF-LPDKAIDTYR---MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
S + N+LI+ Y+ C C+D AL IF N+ K+ +SW ++ AL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 219 EMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
+M P+ T+ + ++ACA +GAL G HA+V++ V D + L+DMY +
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT---GVGLDDFLPNALLDMYVR 545
Query: 279 CGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVG 338
CG + A F +DV SWN ++ G+S G+ ++ F RMVK + P+ ITF+
Sbjct: 546 CGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRVRPDEITFIS 603
Query: 339 VLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
+L C+ MV +GLMYF M ++Y V P L+HY C+VDL RAG +QEA + +MP+
Sbjct: 604 LLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT 662
Query: 399 PDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGL 458
PD +W +LL+AC + ++LGE A+ +FE++ G Y+LL LYA +W EV
Sbjct: 663 PDPAVWGALLNAC-RIHHKIDLGELSAQHIFELDKKSV-GYYILLCNLYADCGKWREVAK 720
Query: 459 LRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPD 518
+R++M + G+T GCS +E+ G H F + D HP++++I L EK+ +G L
Sbjct: 721 VRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG-LTK 779
Query: 519 YSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLIS 578
S + +DET + HSER AIAFGL+N+ PGMPI V KNL +C +CH K IS
Sbjct: 780 ISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFIS 839
Query: 579 SIYNVEIIVRDRARFHHFKDGTCSCMD 605
EI VRD FHHFKDG CSC D
Sbjct: 840 KTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 177/354 (50%), Gaps = 18/354 (5%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L + L + +L A +F + N F WN L+ YA+ + +A+ LY M+ +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG-YFDEAMCLYHRMLWV 189
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
V PD YTFP VL+ C L GK+VH +++ GYE D + N+LI Y CG +
Sbjct: 190 --GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISAC 238
A +F M + +SWN M+ Y G L++F M L DPD T+ SVISAC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
LG LG HAYV+ A D+ V L MY GS A+++F RM +D+
Sbjct: 308 ELLGDRRLGRDIHAYVIT---TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
SW ++I G+ + + A+D +RM+ + P+ IT VLSAC G ++ G+ +
Sbjct: 365 SWTTMISGYEYNFLPDKAIDT-YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 359 MTKEYNVEPRLEHY----GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
K RL Y L++++++ I +AL++ +P + + + W S++
Sbjct: 424 AIK-----ARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSII 471
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 147/303 (48%), Gaps = 10/303 (3%)
Query: 111 ELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLI 170
E K + M E V D F +++ C + EG +V++ L + N+ +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 171 HFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH--DPDG 228
+ G L A +F MSE++ SWNV+V Y + G FD A+ ++ ML + PD
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 229 YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV 288
YT V+ C G+ L+ G H +V++ D+ V L+ MY KCG ++ A+ +
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVR---YGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 289 FERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGM 348
F+RMP RD+ SWN++I G+ +G L+ FF M + P+ +T V+SAC G
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSVISACELLGD 312
Query: 349 VNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSL 407
G ++ ++T + V+ + L ++ AG +EA L S M + D V W ++
Sbjct: 313 RRLGRDIHAYVITTGFAVD--ISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTM 369
Query: 408 LDA 410
+
Sbjct: 370 ISG 372
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 308/574 (53%), Gaps = 22/574 (3%)
Query: 39 KQIHAQTL---RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL 95
KQIHA + R +D +F+ Y + A +LF + N WN
Sbjct: 128 KQIHALAVKCGRILD-------VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
I + + + +AIE A + + P+ TF L AC+ L G Q+H +L
Sbjct: 181 I-SNSVTDGRPREAIE---AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
+ G+++D +CN LI FY C + + IF M K+ VSW +V +YV+ E + A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 216 VFGEMLK-LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
++ K + + + + SV+SACAG+ L LG HA+ +K C V + V + LVD
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC---VERTIFVGSALVD 353
Query: 275 MYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE-KFVPNS 333
MY KCG +E ++Q F+ MP +++ + NS+I G++ G+ + AL F M PN
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNY 413
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+TFV +LSAC+ G V G+ FD M Y +EP EHY C+VD+ RAG ++ A +
Sbjct: 414 MTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIK 473
Query: 394 EMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRW 453
+MPI+P +W +L +AC + +LG A+ +F+++ SG +VLLS +A+A RW
Sbjct: 474 KMPIQPTISVWGALQNAC-RMHGKPQLGLLAAENLFKLDPKD-SGNHVLLSNTFAAAGRW 531
Query: 454 NEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESM 513
E +R+ + G+ K G S I + H F A D +H +++I L ++ ++E+
Sbjct: 532 AEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAA 591
Query: 514 GYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKV 573
GY PD L D + K + + HSE+LA+AFGLL+ +PIR+ KNLR+C DCH
Sbjct: 592 GYKPDLK-LSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSF 650
Query: 574 TKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
K +S EIIVRD RFH FKDG CSC DYW
Sbjct: 651 FKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 190/426 (44%), Gaps = 30/426 (7%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+ +HA+ ++T+D+ P FL + +++ YS L A + N W +LI
Sbjct: 26 RVVHARIVKTLDS---PPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
A++ + +E ++ M E VVP+ +TFP KA A GKQ+HA +K G
Sbjct: 83 LAQNGHFSTALVEFFE----MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
D + S Y D A K+F + E++ +WN + + V G A++ F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 219 EMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
E ++ P+ T + ++AC+ L+LGM H V++ DV V L+D Y
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR---SGFDTDVSVCNGLIDFYG 255
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFR----MVKIEKFVPNS 333
KC + ++ +F M ++ SW S++ + + + E A + R +V+ F+ +S
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
VLSAC + G K VE + LVD++ + G I+++
Sbjct: 316 -----VLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 394 EMPIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASA 450
EMP K + V SL+ Q D ++ L EEMA + G + Y+ L ++
Sbjct: 370 EMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPR-----GCGPTPNYMTFVSLLSAC 423
Query: 451 SRWNEV 456
SR V
Sbjct: 424 SRAGAV 429
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 292/488 (59%), Gaps = 10/488 (2%)
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
E+ V ++ T+ L+ ++ L QVH+++++ G+ ++ C +LI+ Y CG +
Sbjct: 231 EDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLY 290
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAG 240
A ++F + ++ ++D+Y + F+ AL +F +M K P+ YT ++++ A
Sbjct: 291 AQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAE 350
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
L L G H V+K +N V+V LV+MY K GS+E A++ F M +RD+ +W
Sbjct: 351 LSLLKQGDLLHGLVLKSGYRN---HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTW 407
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
N++I G S HG AL+ F RM+ + +PN ITF+GVL AC+H G V +GL YF+ +
Sbjct: 408 NTMISGCSHHGLGREALEAFDRMIFTGE-IPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
K+++V+P ++HY C+V L ++AG ++A + + PI+ D V WR+LL+AC + + L
Sbjct: 467 KKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR-RNYRL 525
Query: 421 GEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEID 480
G+++A+ E + SG YVLLS ++A + W V +R LM+++GV K+PG S I I
Sbjct: 526 GKKVAEYAIE-KYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIR 584
Query: 481 GVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRLH 539
H F A D HP+ IY + E+ K++ +GY PD +GA H VDE + ++ L H
Sbjct: 585 NQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDE--EQREDNLSYH 642
Query: 540 SERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDG 599
SE+LA+A+GL+ + P+ V KN+R+C DCH KLIS I I++RD RFHHF DG
Sbjct: 643 SEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDG 702
Query: 600 TCSCMDYW 607
CSC DYW
Sbjct: 703 QCSCCDYW 710
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 180/398 (45%), Gaps = 17/398 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+ IHA + T + ++ + + + +++ Y + A +LF + N W +++
Sbjct: 51 ESIHAHLIVT-NQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y S + ++L+K+M E P+ + V K+C+++ + EGKQ H LK G
Sbjct: 110 YQNSG-FDFEVLKLFKSMFFSGESR--PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYG 166
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
S + N+L++ Y+ C A+++ ++ ++ + Y+ G F L V
Sbjct: 167 LISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDV-- 224
Query: 219 EMLKLHDPD----GYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
+ K + D T S + + L L+L + H+ +++ A+V L++
Sbjct: 225 -LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR---FGFNAEVEACGALIN 280
Query: 275 MYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSI 334
MY KCG + AQ+VF+ +++ +I+ + E AL+ F +M ++ PN
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM-DTKEVPPNEY 339
Query: 335 TFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSE 394
TF +L++ ++ +G + ++ K + LV+++A++G I++A S
Sbjct: 340 TFAILLNSIAELSLLKQGDLLHGLVLKS-GYRNHVMVGNALVNMYAKSGSIEDARKAFSG 398
Query: 395 MPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIE 432
M + D V W +++ C E E + +F E
Sbjct: 399 MTFR-DIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 17/274 (6%)
Query: 124 VVPDHYTFPF-------VLKACAHTFSLCEGKQVHAQLLKLGYES---DTRICNSLIHFY 173
+VP PF +LK CA++ L G+ +HA L+ S D NSLI+ Y
Sbjct: 20 LVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLY 79
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTM 231
C A K+F M E++ VSW M+ Y +G LK+F M + P+ +
Sbjct: 80 VKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVA 139
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
V +C+ G + G H +K + + V LV MY C A +V +
Sbjct: 140 TVVFKSCSNSGRIEEGKQFHGCFLK---YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
+PY D++ ++S + G+ G + LD R E FV N++T++ L ++ +N
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLD-VLRKTANEDFVWNNLTYLSSLRLFSNLRDLNL 255
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
L M + + +E G L++++ + G++
Sbjct: 256 ALQVHSRMVR-FGFNAEVEACGALINMYGKCGKV 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 231 MQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFE 290
+ ++ CA L +G HA+++ + A D L+++Y KC A+++F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 291 RMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN 350
MP R+V SW +++ G+ G L F M + PN V +C++ G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 351 EGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
EG + K Y + LV +++ EA+ ++ ++P
Sbjct: 154 EGKQFHGCFLK-YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 205/538 (38%), Positives = 294/538 (54%), Gaps = 25/538 (4%)
Query: 74 LNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPF 133
++ A +F + N W T+I Y R N A +L+ EV+P+ +
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGY-RQNNRVDVARKLF---------EVMPEKTEVSW 237
Query: 134 VLKACAHTFSLCEGKQVHAQ-LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
+T S G+ A+ ++ CN++I + G + A ++F M ++
Sbjct: 238 TSMLLGYTLS---GRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAH 251
+W M+ +Y R G AL +F +M K P ++ S++S CA L +L G H
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 252 AYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHG 311
A++++ C + DV V + L+ MY KCG L A+ VF+R +D+ WNSII G++ HG
Sbjct: 355 AHLVR-CQFD--DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH 371
E AL F M +PN +T + +L+AC++ G + EGL F+ M ++ V P +EH
Sbjct: 412 LGEEALKIFHEMPS-SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 372 YGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEI 431
Y C VD+ RAG++ +A+ L+ M IKPDA +W +LL AC K + ++L E AK++FE
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC-KTHSRLDLAEVAAKKLFEN 529
Query: 432 EGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGD- 490
E +G YVLLS + AS S+W +V ++RK M V+K PGCS IE+ H F G
Sbjct: 530 EPD-NAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGI 588
Query: 491 TTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGL 549
HP+ I L + D L GY PD S H VDE + K +L HSERLA+A+GL
Sbjct: 589 KNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDE--EEKVDSLSRHSERLAVAYGL 646
Query: 550 LNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
L G+PIRV KNLRVC DCH KLIS + EII+RD RFHHF +G CSC DYW
Sbjct: 647 LKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 154/393 (39%), Gaps = 71/393 (18%)
Query: 38 LKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
+K++ RT T+ F SR+ S + +N A + F WN+++
Sbjct: 1 MKRLKLILRRTYLTSTGVNCSFEISRL----SRIGKINEARKFFDSLQFKAIGSWNSIVS 56
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
Y + K +A +L+ M E VV ++ ++ + E + V +L
Sbjct: 57 GYFSNGLPK-EARQLFDEMS---ERNVV----SWNGLVSGYIKNRMIVEARNV----FEL 104
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
E + +++ Y G + A +F M E++EVSW VM + G D A K+
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKL- 163
Query: 218 GEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
Y M V DV+ +T ++ C
Sbjct: 164 -----------YDMMPV-----------------------------KDVVASTNMIGGLC 183
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
+ G ++ A+ +F+ M R+V +W ++I G+ + + + A F M + +++
Sbjct: 184 REGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE-----KTEVSWT 238
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
+L G + + +F++M ++P + +V F G I +A + M
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMP----MKPVIACNAMIVG-FGEVGEISKARRVFDLMED 293
Query: 398 KPDAVIWRSLLDACCKQDASVE---LGEEMAKQ 427
+ +A WR ++ A ++ +E L +M KQ
Sbjct: 294 RDNAT-WRGMIKAYERKGFELEALDLFAQMQKQ 325
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 32 IITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
+ ++ + +Q+HA +R +++ S ++ Y +L A +F F + M
Sbjct: 344 LASLQYGRQVHAHLVRC----QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN++I YA S +A++++ M +P+ T +L AC++ L EG ++
Sbjct: 400 WNSIISGYA-SHGLGEEALKIFHE---MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 152 AQLLKLGYESDTRICNSLIHFYAT------CGCLDMALKIFQNMSEKSEVS-WNVMVDSY 204
+ ES + ++ H+ T G +D A+++ ++M+ K + + W ++ +
Sbjct: 456 ESM-----ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 510
Query: 205 VRAGEFDTALKVFGEMLKLHDPDG---YTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
D A +V + L ++PD Y + S I+A S W V++K
Sbjct: 511 KTHSRLDLA-EVAAKKLFENEPDNAGTYVLLSSINA-------SRSKWGDVAVVRKN--- 559
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQV 288
+ T V + C +E+ ++V
Sbjct: 560 ------MRTNNVSKFPGCSWIEVGKKV 580
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 314/557 (56%), Gaps = 24/557 (4%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSF---MWNTLIRAYARSANHKHQAIELYKAM 116
L S+++ +S L+ A ++F + +W + Y+R+ + + A+ +Y M
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPR-DALIVYVDM 227
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
+ E P +++ LKAC L G+ +HAQ++K + D + N L+ Y
Sbjct: 228 LCSFIE---PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMES 284
Query: 177 GCLDMALKIFQNMSEKSEVSWNVMVD---SYVRAGE-FDTALKVFGEMLKLHDPDGYTMQ 232
G D A K+F MSE++ V+WN ++ VR E F+ K+ EM+ T+
Sbjct: 285 GLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF---SWATLT 341
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
+++ AC+ + AL G HA ++K +K DV + L+DMY KCG +E +++VF+ M
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEK---PDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
+D+ SWN ++ ++++G E ++ F M++ P+ ITFV +LS C+ G+ G
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIE-SGVAPDGITFVALLSGCSDTGLTEYG 457
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
L F+ M E+ V P LEHY CLVD+ RAG+I+EA+ ++ MP KP A IW SLL++ C
Sbjct: 458 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS-C 516
Query: 413 KQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKP 472
+ +V +GE AK++F +E G YV++S +YA A W+ V +R++M +GV K+
Sbjct: 517 RLHGNVSVGEIAAKELFVLEPH-NPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEA 575
Query: 473 GCSLIEIDGVAHEFFAGDTTHPKSEDIY-KFLNEIDEKLESMGYLPDYSGA-HLVDETID 530
GCS +++ F AG ++ D Y K E+ E +E GY P+ S H VDE +
Sbjct: 576 GCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDE--E 633
Query: 531 GKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDR 590
K + + HSERLA + L+++ G+PIR+ KNLRVC+DCH K++S + I++RD
Sbjct: 634 TKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDT 693
Query: 591 ARFHHFKDGTCSCMDYW 607
RFHHF DG CSC DYW
Sbjct: 694 KRFHHFVDGICSCKDYW 710
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 14/317 (4%)
Query: 108 QAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK-LGYESDTRIC 166
+A+ L + P+ YT +L AC SL G ++ + +L + ++
Sbjct: 113 EAVTLIENSSSSPSNLSTPEAYTD--LLHACISAKSLHHGIKICSLILNNPSLRHNPKLL 170
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKS---EVSWNVMVDSYVRAGEFDTALKVFGEML-K 222
+ LI ++ C LD+A KIF ++++ S E W M Y R G AL V+ +ML
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 223 LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
+P +++ + AC L L +G HA ++K+ +K D +V L+ +Y + G
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEK---VDQVVYNVLLKLYMESGLF 287
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
+ A++VF+ M R+V +WNS+I S + + FR ++ E + T +L A
Sbjct: 288 DDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN-LFRKMQEEMIGFSWATLTTILPA 346
Query: 343 CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAV 402
C+ + G + K +P + L+D++ + G ++ + + M K D
Sbjct: 347 CSRVAALLTGKEIHAQILKSKE-KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-DLA 404
Query: 403 IWRSLLDACCKQDASVE 419
W +L+ C + ++E
Sbjct: 405 SWNIMLN-CYAINGNIE 420
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 303/554 (54%), Gaps = 24/554 (4%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPN--SFMWNTLIRAYARSANHK-HQAIELYKA 115
F+ + ++ Y + A ++F + + S +N LI Y +AN K A +++
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGY--TANSKVTDAAYMFRR 146
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M E V D T ++ C L G+ +H Q +K G +S+ + NS I Y
Sbjct: 147 MK---ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMK 203
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSV 234
CG ++ ++F M K ++WN ++ Y + G L+++ +M PD +T+ SV
Sbjct: 204 CGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSV 263
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKN-VAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
+S+CA LGA +G H V K + N +V V+ + MY +CG+L A+ VF+ MP
Sbjct: 264 LSSCAHLGAKKIG---HE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
+ + SW ++I + MHG E L F M+K P+ FV VLSAC+H G+ ++GL
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK 413
F M +EY +EP EHY CLVDL RAGR+ EA+ + MP++PD +W +LL AC K
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGAC-K 437
Query: 414 QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPG 473
+V++ E +V E E + G YVL+S +Y+ + + +R +M ++ KKPG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNI-GYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496
Query: 474 CSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKK 533
S +E G H F AGD +H ++E++++ L+E++ + + D V
Sbjct: 497 YSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVS------- 549
Query: 534 STLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARF 593
ST R HSERLAIAFG+LNS PG I V KNLRVC DCH K +S I + + +VRD +RF
Sbjct: 550 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 594 HHFKDGTCSCMDYW 607
H+FKDG CSC DYW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 169/351 (48%), Gaps = 18/351 (5%)
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN +R A + ++I LY++M+ PD ++FPF+LK+CA G+Q+H
Sbjct: 21 WNVRLRELAYQSLFS-ESISLYRSML---RSGSSPDAFSFPFILKSCASLSLPVSGQQLH 76
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS--WNVMVDSYVRAGE 209
+ K G E++ + +LI Y CG + A K+F+ + S++S +N ++ Y +
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 210 FDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
A +F M + D TM ++ C L LG H +K + ++V V
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK---GGLDSEVAV 193
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+ MY KCGS+E +++F+ MP + + +WN++I G+S +G A L+ + +M K
Sbjct: 194 LNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM-KSSG 252
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
P+ T V VLS+C H G G + + P + + ++AR G + +A
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIG-HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 389 LNLVSEMPIKPDAVIWRSLLDACCKQDASVELG----EEMAKQVFEIEGSV 435
+ MP+K V W +++ C E+G ++M K+ +G+V
Sbjct: 312 RAVFDIMPVK-SLVSWTAMI-GCYGMHGMGEIGLMLFDDMIKRGIRPDGAV 360
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 300/546 (54%), Gaps = 13/546 (2%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ Y + +++ + R+ + + WN LI YA + +A+ ++ M + E
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-PDKALAAFQTMRV---EG 458
Query: 124 VVPDHYTFPFVLKACAHTFSLCE-GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMA 182
V ++ T VL AC L E GK +HA ++ G+ESD + NSLI YA CG L +
Sbjct: 459 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 518
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGL 241
+F + ++ ++WN M+ + G + LK+ +M D ++ +SA A L
Sbjct: 519 QDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL 578
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
L G H +K D + DMY KCG + ++ R + SWN
Sbjct: 579 AVLEEGQQLHGLAVKL---GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 635
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK 361
+I HG E F M+++ P +TFV +L+AC+H G+V++GL Y+DM+ +
Sbjct: 636 ILISALGRHGYFEEVCATFHEMLEM-GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 694
Query: 362 EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELG 421
++ +EP +EH C++DL R+GR+ EA +S+MP+KP+ ++WRSLL A CK +++ G
Sbjct: 695 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL-ASCKIHGNLDRG 753
Query: 422 EEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDG 481
+ A+ + ++E S YVL S ++A+ RW +V +RK M K + KK CS +++
Sbjct: 754 RKAAENLSKLEPEDDS-VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 812
Query: 482 VAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSE 541
F GD THP++ +IY L +I + ++ GY+ D S A L D + K+ L HSE
Sbjct: 813 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA-LQDTDEEQKEHNLWNHSE 871
Query: 542 RLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTC 601
RLA+A+ L+++ G +R+FKNLR+CSDCH V K +S + I++RD+ RFHHF+ G C
Sbjct: 872 RLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLC 931
Query: 602 SCMDYW 607
SC DYW
Sbjct: 932 SCKDYW 937
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 182/404 (45%), Gaps = 38/404 (9%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ + ILH Y ++ + ++F N W +L+ Y+ + I++YK M
Sbjct: 94 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS-DKGEPEEVIDIYKGMR 152
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
E V + + V+ +C G+Q+ Q++K G ES + NSLI + G
Sbjct: 153 ---GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 209
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP-DGYTMQSVIS 236
+D A IF MSE+ +SWN + +Y + G + + ++F M + HD + T+ +++S
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
+ G H V+K +V V V L+ MY G A VF++MP +D
Sbjct: 270 VLGHVDHQKWGRGIHGLVVKMGFDSV---VCVCNTLLRMYAGAGRSVEANLVFKQMPTKD 326
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN-----------H 345
+ SWNS++ F G++ AL M+ K V N +TF L+AC H
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGRILH 385
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR 405
+V GL Y ++ LV ++ + G + E+ ++ +MP + D V W
Sbjct: 386 GLVVVSGLFYNQIIGN------------ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 432
Query: 406 SLLDACCK-QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
+L+ + +D L A Q +EG V S ++S L A
Sbjct: 433 ALIGGYAEDEDPDKALA---AFQTMRVEG-VSSNYITVVSVLSA 472
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 165/367 (44%), Gaps = 38/367 (10%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
Y+ + A LF N WNT++ R + + +E ++ M + + P
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYL-EGMEFFRKMC---DLGIKPS 57
Query: 128 HYTFPFVLKACAHTFSLC-EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
+ ++ AC + S+ EG QVH + K G SD + +++H Y G + + K+F
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVF----GEMLKLHDPDGYTMQSVISACAGLG 242
+ M +++ VSW ++ Y GE + + ++ GE + ++ +M VIS+C L
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNEN---SMSLVISSCGLLK 174
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
SLG V+K + + + V L+ M G+++ A +F++M RD SWNS
Sbjct: 175 DESLGRQIIGQVVK---SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 231
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH-------RGMVNEGL-- 353
I ++ +G E + F M + V NS T +LS H RG+ GL
Sbjct: 232 IAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGI--HGLVV 288
Query: 354 -MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
M FD + N L+ ++A AGR EA + +MP K D + W SL+ +
Sbjct: 289 KMGFDSVVCVCNT---------LLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFV 338
Query: 413 KQDASVE 419
S++
Sbjct: 339 NDGRSLD 345
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 338 bits (866), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 299/549 (54%), Gaps = 12/549 (2%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L + +++ YS + A ++F + + WNT+I Y R+ + +A++++ + M
Sbjct: 98 LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN-RMESEALDIF---LEM 153
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
E +T VL AC E K++H +K + + + +L+ YA CG +
Sbjct: 154 RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISAC 238
A+++F++M +KS V+W+ MV YV+ ++ AL ++ ++ + + +T+ SVI AC
Sbjct: 214 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
+ L AL G HA + C ++V V + VDMY KCGSL + +F + +++
Sbjct: 274 SNLAALIEGKQMHAVI---CKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
WN+II GF+ H + + + F +M + + PN +TF +LS C H G+V EG +F +
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
M Y + P + HY C+VD+ RAG + EA L+ +P P A IW SLL A C+ ++
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL-ASCRVYKNL 448
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
EL E A+++FE+E +G +VLLS +YA+ +W E+ RKL+ D V K G S I+
Sbjct: 449 ELAEVAAEKLFELEPEN-AGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWID 507
Query: 479 IDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRL 538
I H F G++ HP+ +I L+ + K GY P L D I K+ L
Sbjct: 508 IKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVE-HELHDVEIGKKEELLMQ 566
Query: 539 HSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKD 598
HSE+LA+ FGL+ P+R+ KNLR+C DCH+ K S IIVRD RFHHF D
Sbjct: 567 HSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSD 626
Query: 599 GTCSCMDYW 607
G CSC D+W
Sbjct: 627 GHCSCGDFW 635
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 23/306 (7%)
Query: 121 EEEVVPDHYTFPF--------VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHF 172
+EEV P Y+ F +L+ CA ++ E K H +++++ E D + N LI+
Sbjct: 46 QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105
Query: 173 YATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM----LKLHDPDG 228
Y+ CG +++A ++F M E+S VSWN M+ Y R AL +F EM K +
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSE--- 162
Query: 229 YTMQSVISACAGLGALSLGMWA-HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQ 287
+T+ SV+SAC G+ +L H +K C + ++ V T L+D+Y KCG ++ A Q
Sbjct: 163 FTISSVLSAC-GVNCDALECKKLHCLSVKTC---IDLNLYVGTALLDLYAKCGMIKDAVQ 218
Query: 288 VFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
VFE M + +W+S++ G+ + E AL +R + N T V+ AC++
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEAL-LLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 348 MVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSL 407
+ EG ++ K + VD++A+ G ++E+ + SE+ K + +W ++
Sbjct: 278 ALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NLELWNTI 335
Query: 408 LDACCK 413
+ K
Sbjct: 336 ISGFAK 341
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 301/553 (54%), Gaps = 18/553 (3%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ S ++ Y A + + + + LI Y+ K + E KA
Sbjct: 201 VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS----QKGEDTEAVKAFQ 256
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
M+ E+V P+ YT+ VL +C + + GK +H ++K G+ES SL+ Y C
Sbjct: 257 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
+D +L++F+ + ++VSW ++ V+ G + AL F +M++ P+ +T+ S +
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
C+ L G H V K D + L+D+Y KCG ++A+ VF+ + D
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKY---GFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVD 433
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V S N++I ++ +G ALD F RM+ + PN +T + VL ACN+ +V EG F
Sbjct: 434 VISLNTMIYSYAQNGFGREALDLFERMINL-GLQPNDVTVLSVLLACNNSRLVEEGCELF 492
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
D K+ + +HY C+VDL RAGR++EA L +E+ I PD V+WR+LL AC K
Sbjct: 493 DSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSAC-KVHR 549
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
VE+ E + +++ EIE G +L+S LYAS +WN V ++ M D + K P S
Sbjct: 550 KVEMAERITRKILEIEPGD-EGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSW 608
Query: 477 IEIDGVAHEFFAGDT-THPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKS 534
+EI+ H F AGD +HP SE I + L E+ +K + +GY+ D S ++ET K+
Sbjct: 609 VEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEET--AKER 666
Query: 535 TLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFH 594
+L HSE+LAIAF + + G IR+ KNLRVC DCH K++S + EII RD RFH
Sbjct: 667 SLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFH 725
Query: 595 HFKDGTCSCMDYW 607
HF+DG+CSC DYW
Sbjct: 726 HFRDGSCSCGDYW 738
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 167/352 (47%), Gaps = 16/352 (4%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++S +K I A L++ P A S+++ D++YA ++F + + WN
Sbjct: 80 SISGIKTIQAHMLKS----GFP-AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWN 134
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
+LI AY +A+E+Y+ LM+ V+PD YT V KA + E ++ H
Sbjct: 135 SLI-AYLIKHRRSKEAVEMYR---LMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGL 190
Query: 154 LLKLGYE-SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
+ LG E S+ + ++L+ Y G A + + EK V ++ Y + GE
Sbjct: 191 AVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTE 250
Query: 213 ALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
A+K F ML + P+ YT SV+ +C L + G H ++K ++ A T
Sbjct: 251 AVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS---QTS 307
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
L+ MY +C ++ + +VF+ + Y + SW S+I G +G+ E AL F +M++ + P
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR-DSIKP 366
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
NS T L C++ M EG ++TK Y + L+DL+ + G
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCG 417
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 14/275 (5%)
Query: 57 ALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAM 116
AL + +L Y + ++ + R+F PN W +LI ++ + IE K
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK-- 358
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
MM + + P+ +T L+ C++ EG+Q+H + K G++ D + LI Y C
Sbjct: 359 --MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 177 GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVI 235
GC DMA +F +SE +S N M+ SY + G AL +F M+ L P+ T+ SV+
Sbjct: 417 GCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVL 476
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN---TCLVDMYCKCGSLEIAQQVFERM 292
AC + G + + DK +L N C+VD+ + G LE A+ + +
Sbjct: 477 LACNNSRLVEEG--CELFDSFRKDK----IMLTNDHYACMVDLLGRAGRLEEAEMLTTEV 530
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
D+ W +++ +H K E A ++++IE
Sbjct: 531 INPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 14/321 (4%)
Query: 129 YTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQN 188
+ F +L+ C S+ K + A +LK G+ ++ + L+ CG +D A ++F
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDG 124
Query: 189 MSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLG 247
MSE+ V+WN ++ ++ A++++ M+ + PD YT+ SV A + L
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 248 MWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGF 307
+H + + ++V V + LVDMY K G A+ V +R+ +DV ++I+G+
Sbjct: 185 QRSHGLAVILGLE--VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 308 SMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEP 367
S G+ A+ F M+ +EK PN T+ VL +C + + G + +M K E
Sbjct: 243 SQKGEDTEAVKAFQSML-VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS-GFES 300
Query: 368 RLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQ 427
L L+ ++ R + ++L + + P+ V W SL+ + EEMA
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGR-----EEMALI 354
Query: 428 VFE--IEGSVCSGAYVLLSKL 446
F + S+ ++ L S L
Sbjct: 355 EFRKMMRDSIKPNSFTLSSAL 375
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/509 (36%), Positives = 288/509 (56%), Gaps = 50/509 (9%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++H+ IHA+ +RT H Q F+ ++ S+L ++YA +F + PN +++
Sbjct: 41 NIAHVPSIHAKIIRTF----HDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYT 96
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
+I + S+ + LY M+ V+PD+Y VLKAC +C +++HAQ
Sbjct: 97 AMIDGFV-SSGRSADGVSLYHRMI---HNSVLPDNYVITSVLKAC--DLKVC--REIHAQ 148
Query: 154 LLKLGYESDTRI-------------------------------CNSLIHFYATCGCLDMA 182
+LKLG+ S + +I+ Y+ CG + A
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGL 241
L++FQ++ K V W M+D VR E + AL++F EM ++ + +T V+SAC+ L
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDL 268
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
GAL LG W H++V ++ + V L++MY +CG + A++VF M +DV S+N
Sbjct: 269 GALELGRWVHSFVE---NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK 361
++I G +MHG + A++ F MV F PN +T V +L+AC+H G+++ GL F+ M +
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVN-RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 362 EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELG 421
+NVEP++EHYGC+VDL R GR++EA + +PI+PD ++ +LL A CK ++ELG
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSA-CKIHGNMELG 443
Query: 422 EEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDG 481
E++AK++FE E SG YVLLS LYAS+ +W E +R+ M D G+ K+PGCS IE+D
Sbjct: 444 EKIAKRLFESENP-DSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
Query: 482 VAHEFFAGDTTHPKSEDIYKFLNEIDEKL 510
HEF GD HP E IY+ L E++ L
Sbjct: 503 QIHEFLVGDIAHPHKEAIYQRLQELNRIL 531
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 199/567 (35%), Positives = 306/567 (53%), Gaps = 26/567 (4%)
Query: 55 PQALFLYSR-----------ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSA 103
P A+ +Y R +++ Y DL A ++F WN +I +
Sbjct: 11 PSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQ-F 69
Query: 104 NHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDT 163
+ + L++ M + PD YT V A S+ G+Q+H +K G E D
Sbjct: 70 EFNEEGLSLFREMHGL---GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDL 126
Query: 164 RICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
+ +SL H Y G L + ++M ++ V+WN ++ + G +T L ++ +M+K+
Sbjct: 127 VVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKI 185
Query: 224 HD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGS 281
P+ T +V+S+C+ L G HA +K ++ V V + L+ MY KCG
Sbjct: 186 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI---GASSVVAVVSSLISMYSKCGC 242
Query: 282 LEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
L A + F D W+S+I + HG+ + A++ F M + N + F+ +L
Sbjct: 243 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDA 401
AC+H G+ ++GL FDMM ++Y +P L+HY C+VDL RAG + +A ++ MPIK D
Sbjct: 303 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 362
Query: 402 VIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRK 461
VIW++LL A C + E+ + + K++ +I+ + S YVLL+ ++ASA RW +V +RK
Sbjct: 363 VIWKTLLSA-CNIHKNAEMAQRVFKEILQIDPND-SACYVLLANVHASAKRWRDVSEVRK 420
Query: 462 LMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSG 521
M DK V K+ G S E G H+F GD + KS++IY +L E+ +++ GY PD +
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480
Query: 522 A-HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSI 580
H +DE + K+S L HSE+LA+AF L+ G PIR+ KNLRVCSDCH K IS I
Sbjct: 481 VLHDMDE--EEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVI 538
Query: 581 YNVEIIVRDRARFHHFKDGTCSCMDYW 607
N EI +RD +RFHHF +G CSC DYW
Sbjct: 539 KNREITLRDGSRFHHFINGKCSCGDYW 565
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 326/640 (50%), Gaps = 89/640 (13%)
Query: 38 LKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
L+ +HAQ LR ++ A +++ S L +Y+ +F + + N F+ N LIR
Sbjct: 45 LRHVHAQILRRGVLSSRVAA-----QLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIR 99
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
+A + + +LM+ V PD TFPFVLK+ + G+ +HA LK
Sbjct: 100 GLTENARFESSV----RHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKN 155
Query: 158 GYESDTRICNSLIHFYATCGCLD-----------------------------------MA 182
+ D+ + SL+ YA G L MA
Sbjct: 156 FVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMA 215
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGE-------------------------------FD 211
+F++M E++ SW+ ++ YV +GE ++
Sbjct: 216 TTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYE 275
Query: 212 TALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
TA+ + EML K P+ YT+ +V+SAC+ GAL G+ H Y++ D + D + T
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL---DNGIKLDRAIGT 332
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV-KIEKF 329
LVDMY KCG L+ A VF M ++D+ SW ++I G+++HG+ A+ F +M+ EK
Sbjct: 333 ALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEK- 391
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
P+ + F+ VL+AC + V+ GL +FD M +Y +EP L+HY +VDL RAG++ EA
Sbjct: 392 -PDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAH 450
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
LV MPI PD W +L A CK E +++ + E++ +C G+Y+ L K +AS
Sbjct: 451 ELVENMPINPDLTTWAALYRA-CKAHKGYRRAESVSQNLLELDPELC-GSYIFLDKTHAS 508
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEK 509
+V R + + + G S IE+DG ++F AGD +H +++I L+EI
Sbjct: 509 KGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISL 568
Query: 510 LESMGYLP--DYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVC 567
GY P D+S H ++E + K++ +HSE+LA+ G L + PG IR+ KNLR+C
Sbjct: 569 AIQKGYNPGADWS-IHDIEE--EEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRIC 625
Query: 568 SDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
DCH + K +S I +I++RD +FHHFKDG CSC DYW
Sbjct: 626 GDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 314/574 (54%), Gaps = 25/574 (4%)
Query: 39 KQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
K+IH +R+ I+T + + + + IL YS +++YA R+F+ + N WN +I
Sbjct: 251 KEIHCHAVRSRIETGD----VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 98 AYARSANHKHQAIELYKAMMLMMEEE-VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
YAR+ + + + M E+ + PD T +L A A + EG+ +H ++
Sbjct: 307 CYARNG----RVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR 358
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
G+ + +LI Y CG L A IF M+EK+ +SWN ++ +YV+ G+ +AL++
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 217 FGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
F E+ PD T+ S++ A A +LS G HAY++K ++ ++ LV M
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS---RYWSNTIILNSLVHM 475
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y CG LE A++ F + +DV SWNSII+ +++HG ++ F M+ + PN T
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-SRVNPNKST 534
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
F +L+AC+ GMV+EG YF+ M +EY ++P +EHYGC++DL R G A + EM
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNE 455
P P A IW SLL+A + + + E A+Q+F++E +G YVLL +YA A RW +
Sbjct: 595 PFVPTARIWGSLLNA-SRNHKDITIAEFAAEQIFKMEHD-NTGCYVLLLNMYAEAGRWED 652
Query: 456 VGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL-ESMG 514
V ++ LM KG+++ S +E G +H F GD +H + IY+ L+ + + E
Sbjct: 653 VNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDI 712
Query: 515 YLPDYSGAHLVDET-IDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKV 573
Y+ + + L ET + + ++ R HS RLA FGL+++ G + V N R+C CH+
Sbjct: 713 YV--HCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEF 770
Query: 574 TKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
+ S + EI+V D FHHF +G CSC +YW
Sbjct: 771 LEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 192/367 (52%), Gaps = 16/367 (4%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
+R L ++ + A +LF K ++F+WN +I+ + S +A++ Y M+
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFT-SCGLYIEAVQFYSRMVF--- 123
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
V D +T+PFV+K+ A SL EGK++HA ++KLG+ SD +CNSLI Y GC
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAG 240
A K+F+ M E+ VSWN M+ Y+ G+ ++L +F EMLK PD ++ S + AC+
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
+ + +G H + ++ + DV+V T ++DMY K G + A+++F M R++ +W
Sbjct: 244 VYSPKMGKEIHCHAVR--SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
N +I ++ +G+ A F +M + P+ IT + +L A + EG
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAM 357
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC---KQDAS 417
+ P + L+D++ G+++ A + M K + + W S++ A K ++
Sbjct: 358 RR-GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSA 415
Query: 418 VELGEEM 424
+EL +E+
Sbjct: 416 LELFQEL 422
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 300/561 (53%), Gaps = 21/561 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F + ++ Y L ++N A +LF +PN W ++I Y A+ +++ M
Sbjct: 65 FTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGY-NDMGKPQNALSMFQKMH- 122
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+ V P+ YTF V KAC+ GK +HA+L G + + +SL+ Y C
Sbjct: 123 -EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 179 LDMALKIFQNM--SEKSEVSWNVMVDSYVRAGEFDTALKVF---GEMLKLHDPDGYTMQS 233
++ A ++F +M ++ VSW M+ +Y + A+++F L + + + S
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLAS 241
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
VISAC+ LG L G AH V + ++ +V T L+DMY KCGSL A+++F R+
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRG---GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR 298
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
V S+ S+I+ + HG EAA+ F MV + PN +T +GVL AC+H G+VNEGL
Sbjct: 299 CHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA-GRINPNYVTLLGVLHACSHSGLVNEGL 357
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPD--AVIWRSLLDAC 411
Y +M ++Y V P HY C+VD+ R GR+ EA L + + + A++W +LL A
Sbjct: 358 EYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAG 417
Query: 412 CKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKK 471
+ VE+ E +K++ + V S AY+ LS YA + W + LR M G K+
Sbjct: 418 -RLHGRVEIVSEASKRLIQSNQQVTS-AYIALSNAYAVSGGWEDSESLRLEMKRSGNVKE 475
Query: 472 PGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAH-----LVD 526
CS IE + F AGD + +S +I +FL +++++++ G+ S VD
Sbjct: 476 RACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVD 535
Query: 527 ETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEII 586
+ K + LH ERLA+A+GLL+ G IR+ NLR+C DCH+ KLIS I EI+
Sbjct: 536 VDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIV 595
Query: 587 VRDRARFHHFKDGTCSCMDYW 607
VRD RFH FK+G+C+C DYW
Sbjct: 596 VRDVNRFHCFKNGSCTCRDYW 616
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 150/311 (48%), Gaps = 27/311 (8%)
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
+H LKLG+ SDT N L+ Y ++ A K+F M E + VSW ++ Y G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 210 FDTALKVFGEMLKLHD-----PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
AL +F K+H+ P+ YT SV AC+ L +G HA + +
Sbjct: 111 PQNALSMFQ---KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEI---SGLRR 164
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMP--YRDVNSWNSIILGFSMHGKAEAALDYFFR 322
+++V++ LVDMY KC +E A++VF+ M R+V SW S+I ++ + + A++ F
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS 224
Query: 323 M-VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFAR 381
+ N V+SAC+ G + G + ++T+ E L+D++A+
Sbjct: 225 FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRG-GYESNTVVATSLLDMYAK 283
Query: 382 AGRIQEALNLVSEMPIKPDAVI-WRSLLDACCKQ---DASVELGEEMAKQVFEIEGSVCS 437
G + A + + I+ +VI + S++ A K +A+V+L +EM + G +
Sbjct: 284 CGSLSCAEKIF--LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM------VAGRINP 335
Query: 438 GAYVLLSKLYA 448
LL L+A
Sbjct: 336 NYVTLLGVLHA 346
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/471 (36%), Positives = 268/471 (56%), Gaps = 41/471 (8%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
Q+ F+ ++++ + + D++YATRLF+ PN F++N++IRAY ++ + I +YK
Sbjct: 40 QSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLY-CDVIRIYKQ 98
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG----------------- 158
++ E +PD +TFPF+ K+CA S GKQVH L K G
Sbjct: 99 LLRKSFE--LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMK 156
Query: 159 --------------YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSY 204
YE D NSL+ YA G + A +F M +K+ VSW M+ Y
Sbjct: 157 FDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
Query: 205 VRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
G + A+ F EM L +PD ++ SV+ +CA LG+L LG W H Y ++
Sbjct: 217 TGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR---GFL 273
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
V L++MY KCG + A Q+F +M +DV SW+++I G++ HG A A++ F M
Sbjct: 274 KQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM 333
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
+ K PN ITF+G+LSAC+H GM EGL YFDMM ++Y +EP++EHYGCL+D+ ARAG
Sbjct: 334 QR-AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAG 392
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLL 443
+++ A+ + MP+KPD+ IW SLL + C+ ++++ + E+E G YVLL
Sbjct: 393 KLERAVEITKTMPMKPDSKIWGSLLSS-CRTPGNLDVALVAMDHLVELEPEDM-GNYVLL 450
Query: 444 SKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHP 494
+ +YA +W +V LRK++ ++ + K PG SLIE++ + EF +GD + P
Sbjct: 451 ANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 140/316 (44%), Gaps = 41/316 (12%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
++Y PF+ + + E K+++A ++ G + + ++ F +D A ++F
Sbjct: 10 ENYFIPFLQRVKSRN----EWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLF 65
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK--LHDPDGYTMQSVISACAGLGAL 244
+S + +N ++ +Y + ++++ ++L+ PD +T + +CA LG+
Sbjct: 66 NQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC 125
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSII 304
LG H ++ C V+ L+DMY K L A +VF+ M RDV SWNS++
Sbjct: 126 YLGKQVHGHL---CKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 305 LGFSMHGKAEAA-------LDY-----------------------FFRMVKIEKFVPNSI 334
G++ G+ + A LD FFR +++ P+ I
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 335 TFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSE 394
+ + VL +C G + G + + + + L++++++ G I +A+ L +
Sbjct: 243 SLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 395 MPIKPDAVIWRSLLDA 410
M K D + W +++
Sbjct: 302 MEGK-DVISWSTMISG 316
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 294/538 (54%), Gaps = 13/538 (2%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ Y + +++ + R+ + + WN LI YA + +A+ ++ M + E
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-PDKALAAFQTMRV---EG 441
Query: 124 VVPDHYTFPFVLKACAHTFSLCE-GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMA 182
V ++ T VL AC L E GK +HA ++ G+ESD + NSLI YA CG L +
Sbjct: 442 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 501
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGL 241
+F + ++ ++WN M+ + G + LK+ +M D ++ +SA A L
Sbjct: 502 QDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL 561
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
L G H +K D + DMY KCG + ++ R + SWN
Sbjct: 562 AVLEEGQQLHGLAVKL---GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 618
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK 361
+I HG E F M+++ P +TFV +L+AC+H G+V++GL Y+DM+ +
Sbjct: 619 ILISALGRHGYFEEVCATFHEMLEM-GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 677
Query: 362 EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELG 421
++ +EP +EH C++DL R+GR+ EA +S+MP+KP+ ++WRSLL A CK +++ G
Sbjct: 678 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL-ASCKIHGNLDRG 736
Query: 422 EEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDG 481
+ A+ + ++E S YVL S ++A+ RW +V +RK M K + KK CS +++
Sbjct: 737 RKAAENLSKLEPEDDS-VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKD 795
Query: 482 VAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSE 541
F GD THP++ +IY L +I + ++ GY+ D S A L D + K+ L HSE
Sbjct: 796 KVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA-LQDTDEEQKEHNLWNHSE 854
Query: 542 RLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDG 599
RLA+A+ L+++ G +R+FKNLR+CSDCH V K +S + I++RD+ RFHHF+ G
Sbjct: 855 RLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 182/404 (45%), Gaps = 38/404 (9%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ + ILH Y ++ + ++F N W +L+ Y+ + I++YK M
Sbjct: 77 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS-DKGEPEEVIDIYKGMR 135
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
E V + + V+ +C G+Q+ Q++K G ES + NSLI + G
Sbjct: 136 ---GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 192
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP-DGYTMQSVIS 236
+D A IF MSE+ +SWN + +Y + G + + ++F M + HD + T+ +++S
Sbjct: 193 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 252
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
+ G H V+K +V V V L+ MY G A VF++MP +D
Sbjct: 253 VLGHVDHQKWGRGIHGLVVKMGFDSV---VCVCNTLLRMYAGAGRSVEANLVFKQMPTKD 309
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN-----------H 345
+ SWNS++ F G++ AL M+ K V N +TF L+AC H
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGRILH 368
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR 405
+V GL Y ++ LV ++ + G + E+ ++ +MP + D V W
Sbjct: 369 GLVVVSGLFYNQIIGN------------ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 415
Query: 406 SLLDACCK-QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
+L+ + +D L A Q +EG V S ++S L A
Sbjct: 416 ALIGGYAEDEDPDKALA---AFQTMRVEG-VSSNYITVVSVLSA 455
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 159/347 (45%), Gaps = 38/347 (10%)
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC-E 146
N WNT++ R + + +E ++ M + + P + ++ AC + S+ E
Sbjct: 5 NEVSWNTMMSGIVRVGLYL-EGMEFFRKMC---DLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
G QVH + K G SD + +++H Y G + + K+F+ M +++ VSW ++ Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 207 AGEFDTALKVF----GEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNV 262
GE + + ++ GE + ++ +M VIS+C L SLG V+K +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNEN---SMSLVISSCGLLKDESLGRQIIGQVVK---SGL 174
Query: 263 AADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFR 322
+ + V L+ M G+++ A +F++M RD SWNSI ++ +G E + F
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 234
Query: 323 MVKIEKFVPNSITFVGVLSACNH-------RGMVNEGL---MYFDMMTKEYNVEPRLEHY 372
M + V NS T +LS H RG+ GL M FD + N
Sbjct: 235 MRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGI--HGLVVKMGFDSVVCVCNT------- 284
Query: 373 GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
L+ ++A AGR EA + +MP K D + W SL+ + S++
Sbjct: 285 --LLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGRSLD 328
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 116/233 (49%), Gaps = 9/233 (3%)
Query: 189 MSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGAL-SL 246
M ++EVSWN M+ VR G + ++ F +M L P + + S+++AC G++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILG 306
G+ H +V K + +DV V+T ++ +Y G + +++VFE MP R+V SW S+++G
Sbjct: 61 GVQVHGFVAK---SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVE 366
+S G+ E +D ++ ++ E N + V+S+C + G + K +E
Sbjct: 118 YSDKGEPEEVID-IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLE 175
Query: 367 PRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+L L+ + G + A + +M + D + W S+ A Q+ +E
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIA-AAYAQNGHIE 226
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/504 (36%), Positives = 279/504 (55%), Gaps = 45/504 (8%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYY-SSLADLNYATRLFHHFGKPNSFMW 92
TM LKQIHA ++T ++ A SR+L + +S +D+NYA +F N F+W
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTA----SRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
NT+IR ++RS+ AI ++ M L V P T+P V KA +G+Q+H
Sbjct: 93 NTIIRGFSRSS-FPEMAISIFIDM-LCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCL-------------------------------DM 181
++K G E D+ I N+++H Y TCGCL D
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAG 240
A +F M +++ VSWN M+ +VR G F AL +F EM K PDG+TM S+++ACA
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
LGA G W H Y+++ + +V T L+DMYCKCG +E VFE P + ++ W
Sbjct: 271 LGASEQGRWIHEYIVRN---RFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
NS+ILG + +G E A+D F + + P+S++F+GVL+AC H G V+ +F +M
Sbjct: 328 NSMILGLANNGFEERAMDLFSELER-SGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
++Y +EP ++HY +V++ AG ++EA L+ MP++ D VIW SLL A C++ +VE+
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA-CRKIGNVEM 445
Query: 421 GEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEID 480
+ AK + +++ G YVLLS YAS + E R LM ++ + K+ GCS IE+D
Sbjct: 446 AKRAAKCLKKLDPDETCG-YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Query: 481 GVAHEFFAGDTTHPKSEDIYKFLN 504
HEF + THPKS +IY L+
Sbjct: 505 FEVHEFISCGGTHPKSAEIYSLLD 528
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 280/497 (56%), Gaps = 46/497 (9%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L++ + ++ YS ++ A +F K + F WN +I Y R ++ ++IEL +
Sbjct: 170 LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE-ESIEL----L 224
Query: 118 LMMEEEVV-PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
+ ME +V P T VL AC+ K+VH + + E R+ N+L++ YA C
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 177 GCLDMALKIFQNMSEKS-------------------------------EVSWNVMVDSYV 205
G +D+A++IF++M + +SW +M+D Y+
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 206 RAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
RAG F+ +L++F EM PD +TM SV++ACA LG+L +G W Y+ K KN
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN--- 401
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
DV+V L+DMY KCG E AQ+VF M RD +W ++++G + +G+ + A+ FF+M
Sbjct: 402 DVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ 461
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
+ P+ IT++GVLSACNH GMV++ +F M ++ +EP L HYGC+VD+ RAG
Sbjct: 462 DMS-IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGL 520
Query: 385 IQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGA-YVLL 443
++EA ++ +MP+ P++++W +LL A + + E AK++ E+E +GA Y LL
Sbjct: 521 VKEAYEILRKMPMNPNSIVWGALLGA-SRLHNDEPMAELAAKKILELEPD--NGAVYALL 577
Query: 444 SKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFL 503
+YA RW ++ +R+ + D + K PG SLIE++G AHEF AGD +H +SE+IY L
Sbjct: 578 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
Query: 504 NEIDEKLESMGYLPDYS 520
E+ ++ YLPD S
Sbjct: 638 EELAQESTFAAYLPDTS 654
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 280/512 (54%), Gaps = 51/512 (9%)
Query: 31 GIITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSF 90
G+ M+ Q+H+ ++ ++ +++ S ++ YS ++N A R+F G N
Sbjct: 164 GLNDMNKGVQVHSLIAKSPFLSD----VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
WN+LI + ++ A+E +M+E V PD T V+ ACA ++ G++V
Sbjct: 220 SWNSLITCFEQNG----PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 151 HAQLLKLG-YESDTRICNSLIHFYATCGCLDMALKIFQNM-------------------- 189
H +++K +D + N+ + YA C + A IF +M
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 190 -----------SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVIS 236
+E++ VSWN ++ Y + GE + AL +F +LK P Y+ +++
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANILK 394
Query: 237 ACAGLGALSLGMWAHAYVMK---KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
ACA L L LGM AH +V+K K D+ V L+DMY KCG +E VF +M
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI-EKFVPNSITFVGVLSACNHRGMVNEG 352
RD SWN++I+GF+ +G AL+ F M++ EK P+ IT +GVLSAC H G V EG
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK--PDHITMIGVLSACGHAGFVEEG 512
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
YF MT+++ V P +HY C+VDL RAG ++EA +++ EMP++PD+VIW SLL A C
Sbjct: 513 RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL-AAC 571
Query: 413 KQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKP 472
K ++ LG+ +A+++ E+E S SG YVLLS +YA +W +V +RK M +GVTK+P
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPS-NSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQP 630
Query: 473 GCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLN 504
GCS I+I G H F D +HP+ + I+ L+
Sbjct: 631 GCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 194/392 (49%), Gaps = 46/392 (11%)
Query: 55 PQA-LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELY 113
PQ ++ ++ ++ + L L+ A LF + + WN+++ +A+ + + + Y
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQ--HDRCEEALCY 139
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
AMM +E V + Y+F VL AC+ + +G QVH+ + K + SD I ++L+ Y
Sbjct: 140 FAMM--HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQ 232
+ CG ++ A ++F M +++ VSWN ++ + + G AL VF ML+ +PD T+
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
SVISACA L A+ +G H V+K + + D++++ VDMY KC ++ A+ +F+ M
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVK--NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 293 PY-------------------------------RDVNSWNSIILGFSMHGKAEAALDYFF 321
P R+V SWN++I G++ +G+ E AL F
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS-LF 374
Query: 322 RMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK-----EYNVEPRLEHYGCLV 376
++K E P +F +L AC ++ G+ + K + E + L+
Sbjct: 375 CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 377 DLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
D++ + G ++E + +M ++ D V W +++
Sbjct: 435 DMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 144/305 (47%), Gaps = 37/305 (12%)
Query: 127 DHYTFPFVLKACAHT-FSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKI 185
D F +L +C + S + VHA ++K G+ ++ I N LI Y+ CG L+ ++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 186 FQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM--------------LKLHDP----- 226
F M +++ +WN +V + G D A +F M HD
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 227 -------------DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
+ Y+ SV+SAC+GL ++ G+ H+ + K +DV + + LV
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK---SPFLSDVYIGSALV 194
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
DMY KCG++ AQ+VF+ M R+V SWNS+I F +G A ALD F M++ + P+
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE-SRVEPDE 253
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+T V+SAC + G + K + + VD++A+ RI+EA +
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 394 EMPIK 398
MPI+
Sbjct: 314 SMPIR 318
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 84/292 (28%)
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILG-- 306
+ HA V+K N ++ + L+D Y KCGSLE +QVF++MP R++ +WNS++ G
Sbjct: 41 YVHASVIKSGFSN---EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 307 -----------------------------FSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
F+ H + E AL YF M K E FV N +F
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK-EGFVLNEYSFA 156
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY---GCLVDLFARAGRIQEALNLVSE 394
VLSAC+ +N+G+ ++ K P L LVD++++ G + +A + E
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKS----PFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 395 MP----------------------------------IKPDAVIWRSLLDACCKQDASVEL 420
M ++PD V S++ AC A +++
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA-IKV 271
Query: 421 GEEMAKQVFEIE----GSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGV 468
G+E+ +V + + + S A+V +YA SR E + M + V
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFV---DMYAKCSRIKEARFIFDSMPIRNV 320
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 311/555 (56%), Gaps = 18/555 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
++ +RIL + + A RLF + N + + ++I + N+ +A EL+K +
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYV-EAFELFK---M 214
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M EE + +TF +L+A A S+ GKQ+H LKLG +T + LI Y+ CG
Sbjct: 215 MWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGD 274
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISA 237
++ A F+ M EK+ V+WN ++ Y G + AL + +M D +T+ +I
Sbjct: 275 IEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRI 334
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
L L L AHA +++ ++++ NT LVD Y K G ++ A+ VF+++P +++
Sbjct: 335 STKLAKLELTKQAHASLIRN---GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNI 391
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
SWN+++ G++ HG+ A+ F +M+ PN +TF+ VLSAC + G+ +G F
Sbjct: 392 ISWNALMGGYANHGRGTDAVKLFEKMIA-ANVAPNHVTFLAVLSACAYSGLSEQGWEIFL 450
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
M++ + ++PR HY C+++L R G + EA+ + P+K +W +LL+AC Q+ +
Sbjct: 451 SMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQE-N 509
Query: 418 VELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
+ELG +A++++ + G G YV++ +Y S + E + + + KG++ P C+ +
Sbjct: 510 LELGRVVAEKLYGM-GPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWV 568
Query: 478 EIDGVAHEFFAGDTTHPKSE----DIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKK 533
E+ H F +GD +E IY+ ++E+ E++ GY + HL+ + + ++
Sbjct: 569 EVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQ--HLLPDVDEKEE 626
Query: 534 STL-RLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRAR 592
+ R HSE+LAIA+GL+N+ P+++ +N R+C +CHKV + IS + E++VRD +R
Sbjct: 627 ERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASR 686
Query: 593 FHHFKDGTCSCMDYW 607
FHHFK+G CSC YW
Sbjct: 687 FHHFKEGKCSCGGYW 701
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 155/316 (49%), Gaps = 29/316 (9%)
Query: 104 NHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDT 163
N +A EL++ + + +V T+ +++AC S+ K+V+ ++ G+E +
Sbjct: 101 NRFREAFELFEILEIRCSFKVGVS--TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQ 158
Query: 164 RICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-K 222
+ N ++ + CG + A ++F + E++ S+ ++ +V G + A ++F M +
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
Query: 223 LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
L D + +T ++ A AGLG++ +G H +K V + V+ L+DMY KCG +
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK---LGVVDNTFVSCGLIDMYSKCGDI 275
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM----VKIEKFVPNSITFVG 338
E A+ FE MP + +WN++I G+++HG +E AL + M V I++F + + +
Sbjct: 276 EDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIS 335
Query: 339 V------LSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
L+ H ++ G E + LVD +++ GR+ A +
Sbjct: 336 TKLAKLELTKQAHASLIRNGF------------ESEIVANTALVDFYSKWGRVDTARYVF 383
Query: 393 SEMPIKPDAVIWRSLL 408
++P + + + W +L+
Sbjct: 384 DKLP-RKNIISWNALM 398
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 280/492 (56%), Gaps = 29/492 (5%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYS-SLA-DLNYATRLFHHFGKPNSFM 91
++ HL QIH Q I ++ F+ S ++ S SLA DL +A L H
Sbjct: 25 SIKHLLQIHGQ----IHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPST 80
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN L R Y+ S++ ++I +Y M + P+ TFPF+LKACA L G+Q+
Sbjct: 81 WNMLSRGYS-SSDSPVESIWVYSEMK---RRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
++LK G++ D + N+LIH Y TC A K+F M+E++ VSWN ++ + V G+ +
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLN 196
Query: 212 TALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
+ F EM+ K PD TM ++SAC G LSLG H+ VM + + + + T
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVR---ELELNCRLGT 251
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
LVDMY K G LE A+ VFERM ++V +W+++I+G + +G AE AL F +M+K
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 331 PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
PN +TF+GVL AC+H G+V++G YF M K + ++P + HYG +VD+ RAGR+ EA +
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 391 LVSEMPIKPDAVIWRSLLDACC-KQDASVE-LGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
+ +MP +PDAV+WR+LL AC D E +GE++ K++ E+E SG V+++ +A
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR-SGNLVIVANRFA 430
Query: 449 SASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSE--------DIY 500
A W E +R++M + + K G S +E+ G H FF+G P+SE D++
Sbjct: 431 EARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG--YDPRSEYVSIYELLDLF 488
Query: 501 KFLNEIDEKLES 512
KF D +L S
Sbjct: 489 KFQLTCDYRLVS 500
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 267/455 (58%), Gaps = 13/455 (2%)
Query: 59 FLYSRILHYYSSLADLN----YATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYK 114
+ S++L + L +LN YA+ +F PNSF+++T+IR +RS+ H + +
Sbjct: 44 YAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSS-QPHLGLRYFL 102
Query: 115 AMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG-YESDTRICNSLIHFY 173
M+ EE++ P + TF F++ AC GKQ+H ++K G + SD+ + ++ Y
Sbjct: 103 LMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIY 162
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQ 232
L A K+F + + V W+V+++ YVR G L+VF EML K +PD +++
Sbjct: 163 VEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVT 222
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
+ ++ACA +GAL+ G W H +V KK + +DV V T LVDMY KCG +E A +VF+++
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKK--SWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
R+V SW ++I G++ +G A+ A+ R+ + + P+S+ +GVL+AC H G + EG
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
+ M Y + P+ EHY C+VDL RAGR+ +ALNL+ +MP+KP A +W +LL+ C
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG-C 399
Query: 413 KQDASVELGEEMAKQVFEIE-GSV--CSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVT 469
+ +VELGE K + ++E G+V A V LS +Y S R E +R ++ +GV
Sbjct: 400 RTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVR 459
Query: 470 KKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLN 504
K PG S++E+DG +F +GD +HP I+ ++
Sbjct: 460 KTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIH 494
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 267/455 (58%), Gaps = 13/455 (2%)
Query: 59 FLYSRILHYYSSLADLN----YATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYK 114
+ S++L + L +LN YA+ +F PNSF+++T+IR +RS+ H + +
Sbjct: 44 YAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSS-QPHLGLRYFL 102
Query: 115 AMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG-YESDTRICNSLIHFY 173
M+ EE++ P + TF F++ AC GKQ+H ++K G + SD + ++ Y
Sbjct: 103 LMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIY 162
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQ 232
L A K+F + + V W+V+++ YVR G L+VF EML + +PD +++
Sbjct: 163 VEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVT 222
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
+ ++ACA +GAL+ G W H +V KK + + +DV V T LVDMY KCG +E A +VFE++
Sbjct: 223 TALTACAQVGALAQGKWIHEFVKKK--RWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 293 PYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
R+V SW ++I G++ +G A+ A R+ + + P+S+ +GVL+AC H G + EG
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
+ M Y + P+ EHY C+VDL RAGR+ +AL+L+ +MP+KP A +W +LL+ C
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG-C 399
Query: 413 KQDASVELGEEMAKQVFEIE-GSV--CSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVT 469
+ +VELGE + + ++E G+V A V LS +Y S R E +R ++ +G+
Sbjct: 400 RTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIR 459
Query: 470 KKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLN 504
K PG SL+E+DG+ +F +GD +HP I+ ++
Sbjct: 460 KTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIH 494
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 289/549 (52%), Gaps = 35/549 (6%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A +F N WN++I A+ + N +AI ++ M M + V D T +
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAF-QCCNLGKKAIGVF---MRMHSDGVGFDRATLLNICS 269
Query: 137 ACAHTFSLCEGK------QVHAQLLKLGYESDTRICNSLIHFYAT-----CGCLDMALKI 185
+ + L + Q+H+ +K G + T + +LI Y+ C K+
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCY----KL 325
Query: 186 FQNMSE-KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGA 243
F MS + V+WN ++ ++ + + A+ +FG++ + PD YT SV+ ACAGL
Sbjct: 326 FMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVT 384
Query: 244 LSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSI 303
+ HA V+K AD ++N L+ Y KCGSL++ +VF+ M RDV SWNS+
Sbjct: 385 ARHALSIHAQVIKG---GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSM 441
Query: 304 ILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEY 363
+ +S+HG+ ++ L F +M P+S TF+ +LSAC+H G V EGL F M ++
Sbjct: 442 LKAYSLHGQVDSILPVFQKM----DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKP 497
Query: 364 NVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEE 423
P+L HY C++D+ +RA R EA ++ +MP+ PDAV+W +LL + C++ + LG+
Sbjct: 498 ETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGS-CRKHGNTRLGKL 556
Query: 424 MAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVA 483
A ++ E+ S +Y+ +S +Y + +NE L K M V K+P S EI
Sbjct: 557 AADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKV 616
Query: 484 HEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERL 543
HEF +G P E +Y+ L + L+ MGY+P+ A E + ++ L HSE+L
Sbjct: 617 HEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKL 676
Query: 544 AIAFGLLNSRPGMP-----IRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKD 598
A+AF ++ R I++ KN R+C DCH KL S + EI++RD RFHHFKD
Sbjct: 677 ALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKD 736
Query: 599 GTCSCMDYW 607
+CSC DYW
Sbjct: 737 SSCSCNDYW 745
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 168/353 (47%), Gaps = 24/353 (6%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM-WNTLIRA 98
Q+H+ T+++ T A L I Y L D +LF + WN +I A
Sbjct: 288 QLHSLTVKSGLVTQTEVATAL---IKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA 344
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+A +AI L+ + +E++ PD YTF VLKACA + +HAQ++K G
Sbjct: 345 FA--VYDPERAIHLFGQLR---QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGG 399
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ +DT + NSLIH YA CG LD+ +++F +M + VSWN M+ +Y G+ D+ L VF
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ 459
Query: 219 EMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
+M +PD T +++SAC+ G + G+ + +K + C++DM +
Sbjct: 460 KMDI--NPDSATFIALLSACSHAGRVEEGLRIFRSMFEK--PETLPQLNHYACVIDMLSR 515
Query: 279 CGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGK---AEAALDYFFRMVKIEKFVPNSI 334
A++V ++MP D W +++ HG + A D +V+ NS+
Sbjct: 516 AERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE----PTNSM 571
Query: 335 TFVGVLSACNHRGMVNEG-LMYFDMMTKEYNVEPRLE--HYGCLVDLFARAGR 384
+++ + + N G NE L +M T EP L G V FA GR
Sbjct: 572 SYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGR 624
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 17/261 (6%)
Query: 69 SSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEV-VPD 127
+SL+ +++ T FG +S + + L R + ++ ++ +A+ L V +
Sbjct: 3 TSLSQISFGT--LRRFG--SSVLPSALKREFVEGLRTLVRSGDIRRAVSLFYSAPVELQS 58
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLK--LGYESDTRICNSLIHFYATCGCLDMALKI 185
+ + +ACA +L +G +H +L Y + + N LI+ YA CG + A ++
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 186 FQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALS 245
F M E++ VSW ++ YV+AG +F ML P+ +T+ SV+++C
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC----RYE 174
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC---GSLEIAQQVFERMPYRDVNSWNS 302
G H +K + + V ++ MY +C + A VFE + ++++ +WNS
Sbjct: 175 PGKQVHGLALK---LGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNS 231
Query: 303 IILGFSMHGKAEAALDYFFRM 323
+I F + A+ F RM
Sbjct: 232 MIAAFQCCNLGKKAIGVFMRM 252
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 15/215 (6%)
Query: 203 SYVRAGEFDTALKVF-GEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
+ VR+G+ A+ +F ++L Y ++ ACA L G+ H +++
Sbjct: 35 TLVRSGDIRRAVSLFYSAPVELQSQQAYA--ALFQACAEQRNLLDGINLHHHMLSH-PYC 91
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFF 321
+ +V++ L++MY KCG++ A+QVF+ MP R+V SW ++I G+ G + F
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 322 RMVKIEKFVPNSITFVGVLSACNHR-GMVNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLF 379
M + PN T VL++C + G GL + + Y + YG D
Sbjct: 152 SM--LSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD-- 207
Query: 380 ARAGRIQEALNLVSEMPIKPDAVIWRSLLDA--CC 412
EA + + K + V W S++ A CC
Sbjct: 208 --GAAAYEAWTVFEAIKFK-NLVTWNSMIAAFQCC 239
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 278/512 (54%), Gaps = 53/512 (10%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYS-SLADLNYATRLFHHFGKPNSFMWN 93
++HLKQ+ Q+ + +H FL ++L + + L +L+YA +F F PN+ ++
Sbjct: 37 LNHLKQV--QSFMIVSGLSHSH--FLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYA 92
Query: 94 TLIRAYARSAN-HKHQAIELYKAMMLMMEEEVV-PDHYTFPFVLKACAHTFSLCEGKQVH 151
++ AY+ S H A ++ LM+ V P+H+ +P VLK+ + S VH
Sbjct: 93 AVLTAYSSSLPLHASSAFSFFR---LMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVH 149
Query: 152 AQLLKLGYESDTRICNSLIHFYAT-CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
L K G+ + +L+H YA+ + +A ++F MSE++ VSW M+ Y R+G+
Sbjct: 150 THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDI 209
Query: 211 DTALKVFGEMLKLH---------------------------------DPDGYTMQSVISA 237
A+ +F +M + P+ T+ V+SA
Sbjct: 210 SNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSA 269
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
CA G L L HA+ ++ ++++DV V+ LVD+Y KCG+LE A VF+ + +
Sbjct: 270 CAQTGTLQLAKGIHAFAYRR---DLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVK--IEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
+WNS+I F++HG++E A+ F M+K I P+ ITF+G+L+AC H G+V++G Y
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY 386
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD 415
FD+MT + +EPR+EHYGCL+DL RAGR EAL ++S M +K D IW SLL+A CK
Sbjct: 387 FDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA-CKIH 445
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYV-LLSKLYASASRWNEVGLLRKLMSDKGVTKKPGC 474
++L E K + + + +G YV +++ LY W E RK++ + K PG
Sbjct: 446 GHLDLAEVAVKNLVALNPN--NGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGW 503
Query: 475 SLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
S IEID H+F++ D +HP++E+IY L+ +
Sbjct: 504 SRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 289/576 (50%), Gaps = 59/576 (10%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K IH LR +++ + ++ Y L YA +F N WN+L+
Sbjct: 245 KAIHGYILRN----QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 99 YARSANHKHQAIELYKAMMLMMEEE-VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
+ + K +A+M+ ME+E + PD T+
Sbjct: 301 LSYACLLKDA-----EALMIRMEKEGIKPDAITW-------------------------- 329
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTA 213
NSL YAT G + AL + M EK + VSW + + G F A
Sbjct: 330 ---------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 214 LKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
LKVF +M + P+ TM +++ L L G H + ++K N+ D V T L
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK---NLICDAYVATAL 437
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
VDMY K G L+ A ++F + + + SWN +++G++M G+ E + F M++ P+
Sbjct: 438 VDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE-AGMEPD 496
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+ITF VLS C + G+V EG YFD+M Y + P +EH C+VDL R+G + EA + +
Sbjct: 497 AITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI 556
Query: 393 SEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASR 452
M +KPDA IW + L + CK +EL E K++ +E S Y+++ LY++ +R
Sbjct: 557 QTMSLKPDATIWGAFLSS-CKIHRDLELAEIAWKRLQVLEPH-NSANYMMMINLYSNLNR 614
Query: 453 WNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES 512
W +V +R LM + V + S I+ID H F+A THP DIY L ++ +++
Sbjct: 615 WEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKK 674
Query: 513 MGYLPDYSGAHLVDETIDGKKSTLRL-HSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCH 571
GY+PD S H + D +K L + H+E+LA+ +GL+ + PIRV KN +CSD H
Sbjct: 675 SGYVPDTSCIH--QDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSH 732
Query: 572 KVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
V K +S + N EI++++ AR HHF+DG CSC D W
Sbjct: 733 TVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 174/383 (45%), Gaps = 48/383 (12%)
Query: 65 LHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEV 124
+ +Y L +A +LF K + WN ++ RS N + +A+EL++ M +
Sbjct: 30 MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWE-KAVELFREMQFSGAKAY 88
Query: 125 VPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALK 184
T +L+ C++ EG+Q+H +L+LG ES+ +CNSLI Y+ G L+++ K
Sbjct: 89 ---DSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRK 145
Query: 185 IFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM------------------------ 220
+F +M +++ SWN ++ SY + G D A+ + EM
Sbjct: 146 VFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
Query: 221 ------------LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+ P ++ S++ A A G L LG H Y+++ + DV V
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR---NQLWYDVYV 262
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
T L+DMY K G L A+ VF+ M +++ +WNS++ G S + A RM K E
Sbjct: 263 ETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEK-EG 321
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
P++IT+ + S G + L M KE V P + + + ++ G + A
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 389 LNL---VSEMPIKPDAVIWRSLL 408
L + + E + P+A +LL
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLL 403
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 125/243 (51%), Gaps = 9/243 (3%)
Query: 147 GKQVHAQLLKLGYE-SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYV 205
G +H L+K G + SDTR+ ++ + FY C L A K+F M ++ +++WN +V +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 206 RAGEFDTALKVFGEMLKLHDPDGY--TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
R+G ++ A+++F EM + Y TM ++ C+ + G H YV++ +
Sbjct: 66 RSGNWEKAVELFREM-QFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR---LGLE 121
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
++V + L+ MY + G LE++++VF M R+++SWNSI+ ++ G + A+ M
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
+I P+ +T+ +LS +G+ + + M + ++P L+ A G
Sbjct: 182 -EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPG 239
Query: 384 RIQ 386
++
Sbjct: 240 HLK 242
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
LG+ H ++K+ N +D V + + Y +C SL A ++F+ MP RD +WN I++
Sbjct: 5 LGLTIHGGLIKRGLDN--SDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG------------- 352
G E A++ FR ++ T V +L C+++ EG
Sbjct: 63 VNLRSGNWEKAVE-LFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 353 ----------LMY-----FDMMTKEYNV--EPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
+MY ++ K +N + L + ++ + + G + +A+ L+ EM
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 396 PI---KPDAVIWRSLLDA 410
I KPD V W SLL
Sbjct: 182 EICGLKPDIVTWNSLLSG 199
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 273/516 (52%), Gaps = 52/516 (10%)
Query: 40 QIHAQTLRTIDT-------TNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
+IH L+T+ T + ++ + S+ L YA +F H PN+++
Sbjct: 22 KIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 81
Query: 93 NTLIRAYA--RSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
NT+IRA + N AI +Y+ + + + PD +TFPFVLK + G+Q+
Sbjct: 82 NTMIRALSLLDEPNAHSIAITVYRKLWALCAK---PDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK------------------ 192
H Q++ G++S + LI Y +CG L A K+F M K
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 193 ---------------SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
+EVSW ++ Y ++G A++VF ML + +PD T+ +V+S
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
ACA LG+L LG +YV + + V +N ++DMY K G++ A VFE + R+
Sbjct: 259 ACADLGSLELGERICSYVDHR---GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 315
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V +W +II G + HG AL F RMVK PN +TF+ +LSAC+H G V+ G F
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVK-AGVRPNDVTFIAILSACSHVGWVDLGKRLF 374
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+ M +Y + P +EHYGC++DL RAG+++EA ++ MP K +A IW SLL A
Sbjct: 375 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL-AASNVHH 433
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
+ELGE ++ ++E + SG Y+LL+ LY++ RW+E ++R +M GV K G S
Sbjct: 434 DLELGERALSELIKLEPN-NSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492
Query: 477 IEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES 512
IE++ ++F +GD THP+ E I++ L E+D +++S
Sbjct: 493 IEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQS 528
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 307/573 (53%), Gaps = 40/573 (6%)
Query: 39 KQIHAQTLRT--IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
KQIH+QT++ D+T+ AL + Y A A+R+F PN W TLI
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNAL-----VDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 97 RAYARSANHKHQAIE-LYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
H ++ + +M M++ EV P+ T VL+AC+ + ++HA LL
Sbjct: 400 LGLV-----DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLL 454
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
+ + + + NSL+ YA+ +D A + ++M + +++ +V + G+ + AL
Sbjct: 455 RRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALS 514
Query: 216 V----FGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
V +G+ +++ D ++ ISA A LGAL G H Y +K AA VL
Sbjct: 515 VINYMYGDGIRM---DQLSLPGFISASANLGALETGKHLHCYSVKSGFSG-AASVL--NS 568
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
LVDMY KCGSLE A++VFE + DV SWN ++ G + +G +AL F M ++++ P
Sbjct: 569 LVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM-RMKETEP 627
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+S+TF+ +LSAC++ + + GL YF +M K YN+EP++EHY LV + RAGR++EA +
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
V M +KP+A+I+++LL A C+ ++ LGE+MA + + S Y+LL+ LY +
Sbjct: 688 VETMHLKPNAMIFKTLLRA-CRYRGNLSLGEDMANKGLALAPS-DPALYILLADLYDESG 745
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTH-PKSEDIYKFLNEIDEKL 510
+ R LM++K ++KK G S +E+ G H F + D T K+ IY + I E++
Sbjct: 746 KPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEI 805
Query: 511 ESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDC 570
+ G Y G HS + A+ +G + + P P+ V KN +C DC
Sbjct: 806 KRFG--SPYRG-----------NENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDC 852
Query: 571 HKVTKLISSIYNVEIIVRDRARFHHFKDGTCSC 603
H+ +++ + + +I VRD + H FK+G CSC
Sbjct: 853 HEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 182/396 (45%), Gaps = 16/396 (4%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+ L L + +L Y + A +LF F W +I A+ +S A+ L++
Sbjct: 56 ENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFA-SALSLFEE 114
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
MM P+ +TF V+++CA + G +VH ++K G+E ++ + +SL Y+
Sbjct: 115 MM---ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSK 171
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSV 234
CG A ++F ++ +SW +M+ S V A ++ AL+ + EM+K P+ +T +
Sbjct: 172 CGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKL 231
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
+ A + LG L G H+ ++ + + +V++ T LVD Y + +E A +V
Sbjct: 232 LGASSFLG-LEFGKTIHSNIIV---RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
+DV W S++ GF + +A+ A+ F M + PN+ T+ +LS C+ ++ G
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFTYSAILSLCSAVRSLDFGKQ 346
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL----DA 410
K E + LVD++ + + + V + P+ V W +L+ D
Sbjct: 347 IHSQTIK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDH 405
Query: 411 CCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKL 446
QD L EM K+ E SG SKL
Sbjct: 406 GFVQDC-FGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 141/286 (49%), Gaps = 14/286 (4%)
Query: 136 KACAHTFSLCE------GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM 189
K+C S CE G +H ++K G + +CN+L+ Y + A K+F M
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGM 248
S ++ +W VM+ ++ ++ EF +AL +F EM+ P+ +T SV+ +CAGL +S G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFS 308
H V+K + +V + L D+Y KCG + A ++F + D SW +I
Sbjct: 145 RVHGSVIK---TGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLV 201
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPR 368
K AL ++ MVK PN TFV +L A + G+ ++ +++ + +
Sbjct: 202 GARKWREALQFYSEMVK-AGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVV 260
Query: 369 LEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
L+ LVD +++ ++++A+ +++ + D +W S++ +
Sbjct: 261 LKT--SLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSGFVRN 303
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 257/450 (57%), Gaps = 17/450 (3%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++ +LKQIHAQ + TI ++H L S++LH S++ L+YA + P+ F++N
Sbjct: 21 SLQNLKQIHAQII-TIGLSHHTYPL---SKLLHLSSTVC-LSYALSILRQIPNPSVFLYN 75
Query: 94 TLIRAYARSAN--HKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE-GKQV 150
TLI + + N H A LY ++ V P+ +T+P + KA G+ +
Sbjct: 76 TLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRAL 135
Query: 151 HAQLLKL--GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG 208
HA +LK D + +L+ FYA CG L A +F+ + E +WN ++ +Y +
Sbjct: 136 HAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSE 195
Query: 209 EFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVL 267
E D+ +V +++ P+ ++ ++I +CA LG G+WAH YV+K N+ +
Sbjct: 196 EIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN---NLTLNQF 252
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
V T L+D+Y KCG L A++VF+ M RDV+ +N++I G ++HG + ++ + ++ +
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLIS-Q 311
Query: 328 KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQE 387
VP+S TFV +SAC+H G+V+EGL F+ M Y +EP++EHYGCLVDL R+GR++E
Sbjct: 312 GLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEE 371
Query: 388 ALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLY 447
A + +MP+KP+A +WRS L + + E GE K + +E SG YVLLS +Y
Sbjct: 372 AEECIKKMPVKPNATLWRSFLGS-SQTHGDFERGEIALKHLLGLEFE-NSGNYVLLSNIY 429
Query: 448 ASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
A +RW +V R+LM D V K PG S +
Sbjct: 430 AGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 245/458 (53%), Gaps = 44/458 (9%)
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE--GKQ 149
W + I R+ A E + +E P+H TF +L C S E G
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVE----PNHITFIALLSGCGDFTSGSEALGDL 94
Query: 150 VHAQLLKLGYESD-TRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG 208
+H KLG + + + ++I Y+ G A +F M +K+ V+WN M+D Y+R+G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 209 EFDTALKVFGEMLKLH--------------------------------DPDGYTMQSVIS 236
+ D A K+F +M + PD + + ++
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
AC LGALS G+W H YV+ + KN +V V+ L+D+YC+CG +E A+QVF M R
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKN---NVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V SWNS+I+GF+ +G A +L YF +M + + F P+++TF G L+AC+H G+V EGL YF
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQE-KGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+M +Y + PR+EHYGCLVDL++RAGR+++AL LV MP+KP+ V+ SLL AC
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
++ L E + K + ++ S YV+LS +YA+ +W +R+ M G+ K+PG S
Sbjct: 391 NIVLAERLMKHLTDLNVKSHSN-YVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSS 449
Query: 477 IEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMG 514
IEID H F AGD H ++ I + L I L G
Sbjct: 450 IEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 40/274 (14%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSAN------------------- 104
I+ YS A +F + NS WNT+I Y RS
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISW 174
Query: 105 -----------HKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
++ +A+ ++ M + V PD+ L AC + +L G VH
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQI---SGVKPDYVAIIAALNACTNLGALSFGLWVHRY 231
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
+L ++++ R+ NSLI Y CGC++ A ++F NM +++ VSWN ++ + G +
Sbjct: 232 VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES 291
Query: 214 LKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
L F +M K PD T ++AC+ +G + G+ + + KCD ++ + CL
Sbjct: 292 LVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL--RYFQIMKCDYRISPRIEHYGCL 349
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILG 306
VD+Y + G LE A ++ + MP + N +++G
Sbjct: 350 VDLYSRAGRLEDALKLVQSMPMKP----NEVVIG 379
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 255/460 (55%), Gaps = 31/460 (6%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
Y L A R+F + ++ WN +I A+ ++ + E + M+ + PD
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG----KGYETLFLFVSMLRSRIEPD 482
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKI-- 185
+TF +LKAC SL G ++H+ ++K G S++ + SLI Y+ CG ++ A KI
Sbjct: 483 EFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 186 --FQ--NMSEKSE--------------VSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DP 226
FQ N+S E VSWN ++ YV + + A +F M+++ P
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
D +T +V+ CA L + LG HA V+KK + +DV + + LVDMY KCG L ++
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 287 QVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHR 346
+FE+ RD +WN++I G++ HGK E A+ F RM+ +E PN +TF+ +L AC H
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHM 717
Query: 347 GMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRS 406
G++++GL YF MM ++Y ++P+L HY +VD+ ++G+++ AL L+ EMP + D VIWR+
Sbjct: 718 GLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777
Query: 407 LLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDK 466
LL C +VE+ EE + ++ S AY LLS +YA A W +V LR+ M
Sbjct: 778 LLGVCTIHRNNVEVAEEATAALLRLDPQD-SSAYTLLSNVYADAGMWEKVSDLRRNMRGF 836
Query: 467 GVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
+ K+PGCS +E+ H F GD HP+ E+IY+ L I
Sbjct: 837 KLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 876
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 177/351 (50%), Gaps = 11/351 (3%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMM 120
++++++ YS D+ A F+ + WN+++ Y ++ ++IE++ + M
Sbjct: 117 WNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG-ESLKSIEVF---VDMG 172
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
E + D TF +LK C+ G Q+H ++++G ++D ++L+ YA
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTM-QSVISACA 239
+L++FQ + EK+ VSW+ ++ V+ ALK F EM K++ ++ SV+ +CA
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
L L LG HA+ +K + AAD +V T +DMY KC +++ AQ +F+ + S
Sbjct: 293 ALSELRLGGQLHAHALK---SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
+N++I G+S AL F R++ + I+ GV AC ++EGL + +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
K ++ + +D++ + + EA + EM + DAV W +++ A
Sbjct: 409 IKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 185/392 (47%), Gaps = 40/392 (10%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
Q+HA L++ + + + L Y+ ++ A LF + N +N +I Y
Sbjct: 302 QLHAHALKS----DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
++ H +A+ L+ +M + D + V +ACA L EG Q++ +K
Sbjct: 358 SQE-EHGFKALLLFHRLM---SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
D + N+ I Y C L A ++F M + VSWN ++ ++ + G+ L +F
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 220 MLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
ML+ +PD +T S++ AC G G+L GM H+ ++K +A++ V L+DMY K
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVK---SGMASNSSVGCSLIDMYSK 529
Query: 279 CGSLEIAQQVFERMPYR-DVN-------------------SWNSIILGFSMHGKAEAALD 318
CG +E A+++ R R +V+ SWNSII G+ M ++E A
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 319 YFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGC--LV 376
F RM+++ P+ T+ VL C + G + K+ E + + Y C LV
Sbjct: 590 LFTRMMEM-GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLV 645
Query: 377 DLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
D++++ G + ++ L+ E ++ D V W +++
Sbjct: 646 DMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMI 676
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 130 TFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM 189
F FV K CA +L GKQ HA ++ G+ T + N L+ Y A +F M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVF---------------------GEMLKLHDP-- 226
+ VSWN M++ Y ++ + A F GE LK +
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 227 ---------DGYTMQSVISACAGLGALSLGMWAHAYVMK-KCDKNVAADVLVNTCLVDMY 276
DG T ++ C+ L SLGM H V++ CD DV+ + L+DMY
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD----TDVVAASALLDMY 225
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
K + +VF+ +P ++ SW++II G + AL +F M K+ V SI +
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-Y 284
Query: 337 VGVLSAC 343
VL +C
Sbjct: 285 ASVLRSC 291
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 258/480 (53%), Gaps = 42/480 (8%)
Query: 65 LHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEV 124
+H ++S D+ A ++F + WN LI Y + +AI +YK LM E V
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGY-KKIGEAEKAIYVYK---LMESEGV 253
Query: 125 VPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALK 184
PD T ++ +C+ L GK+ + + + G + N+L+ ++ CG + A +
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARR 313
Query: 185 IFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM------------------------ 220
IF N+ +++ VSW M+ Y R G D + K+F +M
Sbjct: 314 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 373
Query: 221 LKLHD--------PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
L L PD TM +SAC+ LGAL +G+W H Y+ K +++ +V + T L
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKY---SLSLNVALGTSL 430
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
VDMY KCG++ A VF + R+ ++ +II G ++HG A A+ YF M+ P+
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMID-AGIAPD 489
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
ITF+G+LSAC H GM+ G YF M +N+ P+L+HY +VDL RAG ++EA L+
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 393 SEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASR 452
MP++ DA +W +LL C+ +VELGE+ AK++ E++ S SG YVLL +Y A+
Sbjct: 550 ESMPMEADAAVWGALLFG-CRMHGNVELGEKAAKKLLELDPSD-SGIYVLLDGMYGEANM 607
Query: 453 WNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES 512
W + R++M+++GV K PGCS IE++G+ EF D + P+SE IY L+ + + S
Sbjct: 608 WEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRS 667
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 199/441 (45%), Gaps = 72/441 (16%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHY--YSSLADLNYATRLFHHFGKPNSFMWNT 94
HLKQI AQ + F SR++ + S L+Y+ ++ PN F WN
Sbjct: 68 HLKQIQAQMI----INGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNV 123
Query: 95 LIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
IR ++ S N K ++ LYK M+ E PDH+T+P + K CA G + +
Sbjct: 124 TIRGFSESENPK-ESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHV 182
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
LKL E + + N+ IH +A+CG ++ A K+F + VSWN +++ Y + GE + A+
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 215 KVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYV------------------M 255
V+ M PD TM ++S+C+ LG L+ G + YV
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF 302
Query: 256 KKCD---------KNVAADVLVN-TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
KC N+ +V+ T ++ Y +CG L++++++F+ M +DV WN++I
Sbjct: 303 SKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIG 362
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G + + AL F M + P+ IT + LSAC+ G ++ G+ + ++Y++
Sbjct: 363 GSVQAKRGQDALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSL 420
Query: 366 EPRLEHYGCLVDLFARAGRIQEAL----------------------------------NL 391
+ LVD++A+ G I EAL N
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 392 VSEMPIKPDAVIWRSLLDACC 412
+ + I PD + + LL ACC
Sbjct: 481 MIDAGIAPDEITFIGLLSACC 501
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 254/463 (54%), Gaps = 17/463 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F+ + ++ YSS ++A+RLF + W +I + R+ + A E +
Sbjct: 139 FVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS----ASEAMVYFVE 194
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG-YESDTRICNSLIHFYATCG 177
M + V + T VLKA + G+ VH L+ G + D I +SL+ Y C
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
C D A K+F M ++ V+W ++ YV++ FD + VF EMLK P+ T+ SV+S
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
ACA +GAL G H Y++K ++ + T L+D+Y KCG LE A VFER+ ++
Sbjct: 315 ACAHVGALHRGRRVHCYMIKN---SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN 371
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V +W ++I GF+ HG A A D F+ M+ PN +TF+ VLSAC H G+V EG F
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLS-SHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
M +N+EP+ +HY C+VDLF R G ++EA L+ MP++P V+W +L +C
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHK- 489
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
ELG+ A +V +++ S SG Y LL+ LY+ + W+EV +RK M D+ V K PG S
Sbjct: 490 DYELGKYAASRVIKLQPS-HSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSW 548
Query: 477 IEIDGVAHEFFAGDTTHP-KSEDIYKFLNEIDEKLESMGYLPD 518
IE+ G EF A D P +S+D+YK L+ + ++ LPD
Sbjct: 549 IEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR----LPD 587
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 179/377 (47%), Gaps = 14/377 (3%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
HLKQIH L T + LFL + ++ YA RL + +W++LI
Sbjct: 16 HLKQIHCLLL-TSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI 74
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGK--QVHAQL 154
++ + L A M V+P +TFP +LKA F L + Q HA +
Sbjct: 75 GHFSGGITLNRRLSFL--AYRHMRRNGVIPSRHTFPPLLKA---VFKLRDSNPFQFHAHI 129
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+K G +SD + NSLI Y++ G D A ++F +K V+W M+D +VR G A+
Sbjct: 130 VKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAM 189
Query: 215 KVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
F EM K + T+ SV+ A + + G H ++ V DV + + LV
Sbjct: 190 VYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET--GRVKCDVFIGSSLV 247
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
DMY KC + AQ+VF+ MP R+V +W ++I G+ + + F M+K + PN
Sbjct: 248 DMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD-VAPNE 306
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
T VLSAC H G ++ G M K ++E L+DL+ + G ++EA+ LV
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAI-LVF 364
Query: 394 EMPIKPDAVIWRSLLDA 410
E + + W ++++
Sbjct: 365 ERLHEKNVYTWTAMING 381
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 270/485 (55%), Gaps = 14/485 (2%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
+ + KQIH +R + + +FL S ++ Y ++ A +F + ++
Sbjct: 355 NLEYCKQIHCYIMRHSISLD----IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
+I Y H I+ + +++ ++ P+ T +L +L G+++H
Sbjct: 411 AMISGYL----HNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
++K G+++ I ++I YA CG +++A +IF+ +S++ VSWN M+ ++ A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 214 LKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
+ +F +M + D ++ + +SACA L + S G H +++K ++A+DV + L
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH---SLASDVYSESTL 583
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
+DMY KCG+L+ A VF+ M +++ SWNSII HGK + +L F MV+ P+
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
ITF+ ++S+C H G V+EG+ +F MT++Y ++P+ EHY C+VDLF RAGR+ EA V
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETV 703
Query: 393 SEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASR 452
MP PDA +W +LL A C+ +VEL E + ++ +++ S SG YVL+S +A+A
Sbjct: 704 KSMPFPPDAGVWGTLLGA-CRLHKNVELAEVASSKLMDLDPSN-SGYYVLISNAHANARE 761
Query: 453 WNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES 512
W V +R LM ++ V K PG S IEI+ H F +GD HP+S IY LN + +L
Sbjct: 762 WESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
Query: 513 MGYLP 517
GY+P
Sbjct: 822 EGYIP 826
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 179/371 (48%), Gaps = 14/371 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F+ S ++ Y ++ ++LF + + +WN ++ YA+ + K +
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD----SVIKGFSV 229
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M +++ P+ TF VL CA + G Q+H ++ G + + I NSL+ Y+ CG
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISA 237
D A K+F+ MS V+WN M+ YV++G + +L F EM+ PD T S++ +
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
+ L H Y+M+ +++ D+ + + L+D Y KC + +AQ +F + DV
Sbjct: 350 VSKFENLEYCKQIHCYIMR---HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
+ ++I G+ +G +L+ F +VK+ K PN IT V +L + G
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD-- 415
+ K+ + R ++D++A+ GR+ A + + K D V W S++ C + D
Sbjct: 466 FIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNP 523
Query: 416 -ASVELGEEMA 425
A++++ +M
Sbjct: 524 SAAIDIFRQMG 534
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 11/283 (3%)
Query: 63 RILHYYSSLADLNYATRLFHHFGKPNSFM--WNTLIRAYARSANHKHQAIELYKAMMLMM 120
RIL Y+ + ++F+ S + WN++I ++ R+ +QA+ Y M+
Sbjct: 75 RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNG-LLNQALAFYFKMLCF- 132
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
V PD TFP ++KAC + + + LG + + + +SLI Y G +D
Sbjct: 133 --GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKID 190
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACA 239
+ K+F + +K V WNVM++ Y + G D+ +K F M + P+ T V+S CA
Sbjct: 191 VPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
+ LG+ H V+ V + + L+ MY KCG + A ++F M D +
Sbjct: 251 SKLLIDLGVQLHGLVVV---SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVT 307
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
WN +I G+ G E +L +F+ M+ +P++ITF +L +
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMIS-SGVLPDAITFSSLLPS 349
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 64/339 (18%)
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
EE +P + +L+AC++ L +GKQVHA L+ D+ ++ YA CG
Sbjct: 31 EETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD 88
Query: 182 ALKIFQ--NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISAC 238
K+F ++ S WN ++ S+VR G + AL + +ML PD T ++ AC
Sbjct: 89 CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 239 AGLGAL-----------SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQ 287
L SLGM C++ VA+ L+ Y + G +++ +
Sbjct: 149 VALKNFKGIDFLSDTVSSLGM--------DCNEFVASS------LIKAYLEYGKIDVPSK 194
Query: 288 VFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
+F+R+ +D WN ++ G++ G ++ + F ++++++ PN++TF VLS C +
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG-FSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 348 MVNEGL-----------------------MY-----FDMMTKEYNVEPRLE--HYGCLVD 377
+++ G+ MY FD +K + + R + + C++
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 378 LFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCK 413
+ ++G ++E+L EM + PDA+ + SLL + K
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 247/441 (56%), Gaps = 12/441 (2%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
Y+ LN A R+F +P++ WN +I A + + +A+ ++ M +PD
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG-YADEAVSVFSQMR---SSGFIPD 370
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
+ +L A +L +G Q+H+ ++K G+ +D +CNSL+ Y C L +F+
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 188 NMSEKSE-VSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALS 245
+ ++ VSWN ++ + ++ + L++F ML +PD TM +++ C + +L
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
LG H Y +K +A + + L+DMY KCGSL A+++F+ M RDV SW+++I+
Sbjct: 491 LGSQVHCYSLKT---GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G++ G E AL F+ +K PN +TFVGVL+AC+H G+V EGL + M E+ +
Sbjct: 548 GYAQSGFGEEAL-ILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMA 425
P EH C+VDL ARAGR+ EA + EM ++PD V+W++LL A CK +V L ++ A
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA-CKTQGNVHLAQKAA 665
Query: 426 KQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHE 485
+ + +I+ S A+VLL ++AS+ W LLR M V K PG S IEI+ H
Sbjct: 666 ENILKID-PFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHI 724
Query: 486 FFAGDTTHPKSEDIYKFLNEI 506
FFA D HP+ +DIY L+ I
Sbjct: 725 FFAEDIFHPERDDIYTVLHNI 745
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 188/390 (48%), Gaps = 17/390 (4%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
+++ ++IH L +N L + IL Y L A +F + N +
Sbjct: 82 SLAQGRKIHDHIL----NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYT 137
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
++I Y+++ +AI LY + M++E++VPD + F ++KACA + + GKQ+HAQ
Sbjct: 138 SVITGYSQNG-QGAEAIRLY---LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQ 193
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG-EFDT 212
++KL S N+LI Y + A ++F + K +SW+ ++ + + G EF+
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFE- 252
Query: 213 ALKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
AL EML + P+ Y S + AC+ L G H +K +A + +
Sbjct: 253 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK---SELAGNAIAGC 309
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
L DMY +CG L A++VF+++ D SWN II G + +G A+ A+ F +M + F+
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM-RSSGFI 368
Query: 331 PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
P++I+ +L A +++G+ + K + L L+ ++ + N
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 391 LVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
L + D+V W ++L AC + + VE+
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 130 TFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM 189
T+ ++ AC+ + SL +G+++H +L + DT + N ++ Y CG L A ++F M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLG 247
E++ VS+ ++ Y + G+ A++++ +ML+ D PD + S+I ACA + LG
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ-EDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 248 MWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGF 307
HA V+K ++ ++ L+ MY + + A +VF +P +D+ SW+SII GF
Sbjct: 188 KQLHAQVIK---LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 308 SMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEP 367
S G AL + M+ F PN F L AC+ + G + K
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304
Query: 368 RLEHYGC-LVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ GC L D++AR G + A + ++ +PD W ++
Sbjct: 305 AIA--GCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVII 343
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 47/270 (17%)
Query: 31 GIITMSHLK---QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKP 87
G + +S LK Q+H +L+T F+ + ++ Y+ L A R+F
Sbjct: 482 GCVEISSLKLGSQVHCYSLKT----GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEG 147
+ W+TLI YA+S +A+ L+K M + P+H TF VL AC+H + EG
Sbjct: 538 DVVSWSTLIVGYAQSG-FGEEALILFKE---MKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
+++A + +++ I + H C C+ VD RA
Sbjct: 594 LKLYATM-----QTEHGISPTKEH----CSCV---------------------VDLLARA 623
Query: 208 GEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVL 267
G + A + EM KL +PD ++++SAC G + L A ++K N A VL
Sbjct: 624 GRLNEAERFIDEM-KL-EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVL 681
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
L M+ G+ E A + M DV
Sbjct: 682 ----LCSMHASSGNWENAALLRSSMKKHDV 707
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 255/470 (54%), Gaps = 17/470 (3%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
Q+HA T++ N ++ + ++ Y+ L A ++F F + ++N +I Y
Sbjct: 371 QVHAYTIKA----NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 100 ARSANH--KHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
+R H+A+ +++ M + + P TF +L+A A SL KQ+H + K
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRL---IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKY 483
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
G D ++LI Y+ C CL + +F M K V WN M YV+ E + AL +F
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 218 GEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
E+ L PD +T ++++A L ++ LG H ++K+ + + + L+DMY
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR---GLECNPYITNALLDMY 600
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCGS E A + F+ RDV WNS+I ++ HG+ + AL +M+ E PN ITF
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS-EGIEPNYITF 659
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
VGVLSAC+H G+V +GL F++M + + +EP EHY C+V L RAGR+ +A L+ +MP
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
KP A++WRSLL C K +VEL E A+ + SG++ +LS +YAS W E
Sbjct: 719 TKPAAIVWRSLLSGCAKA-GNVELAEHAAEMAI-LSDPKDSGSFTMLSNIYASKGMWTEA 776
Query: 457 GLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
+R+ M +GV K+PG S I I+ H F + D +H K+ IY+ L+++
Sbjct: 777 KKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 186/371 (50%), Gaps = 24/371 (6%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ + ++ +Y +++YA +F + ++ W T+I + + +++L+ +M
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK-MGRSYVSLQLFYQLM 241
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
E+ VVPD Y VL AC+ L GKQ+HA +L+ G E D + N LI Y CG
Sbjct: 242 ---EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
+ A K+F M K+ +SW ++ Y + A+++F M K PD Y S+++
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
+CA L AL G HAY +K N+ D V L+DMY KC L A++VF+ D
Sbjct: 359 SCASLHALGFGTQVHAYTIK---ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 297 VNSWNSIILGFSMHG---KAEAALDYFFRMVKIEKFVPNSITFVGVLSAC---NHRGMVN 350
V +N++I G+S G + AL+ FR ++ P+ +TFV +L A G+
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALN-IFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 351 E--GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ GLM+ +Y + + L+D+++ ++++ + EM +K D VIW S+
Sbjct: 475 QIHGLMF------KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF 527
Query: 409 DACCKQDASVE 419
+Q + E
Sbjct: 528 AGYVQQSENEE 538
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 19/309 (6%)
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
VH Q++ G E DT + N LI+ Y+ G + A K+F+ M E++ VSW+ MV + G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 210 FDTALKVFGEMLKLH--DPDGYTMQSVISACAGLGALSLGMWA----HAYVMKKCDKNVA 263
++ +L VF E + P+ Y + S I AC+GL G W ++++K
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVK---SGFD 180
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
DV V T L+D Y K G+++ A+ VF+ +P + +W ++I G G++ +L F+++
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
++ + VP+ VLSAC+ + EG Y +E L+D + + G
Sbjct: 241 ME-DNVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA----SVELGEEMAKQVFEIEGSVCSGA 439
R+ A L + MP K + + W +LL KQ+A ++EL M+K + + CS
Sbjct: 299 RVIAAHKLFNGMPNK-NIISWTTLLSG-YKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356
Query: 440 YVLLSKLYA 448
+ L+A
Sbjct: 357 LTSCASLHA 365
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 184/381 (48%), Gaps = 36/381 (9%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
+L + +++ YS + YA ++F + N W+T++ A NH H E +++++
Sbjct: 80 YLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA----CNH-HGIYE--ESLVV 132
Query: 119 MME----EEVVPDHYTFPFVLKACAHTFSLCEGK------QVHAQLLKLGYESDTRICNS 168
+E + P+ Y ++AC S +G+ Q+ + L+K G++ D +
Sbjct: 133 FLEFWRTRKDSPNEYILSSFIQAC----SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTL 188
Query: 169 LIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPD 227
LI FY G +D A +F + EKS V+W M+ V+ G +L++F ++++ + PD
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 228 GYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQ 287
GY + +V+SAC+ L L G HA++++ + D + L+D Y KCG + A +
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILR---YGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 288 VFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
+F MP +++ SW +++ G+ + + A++ F M K P+ +L++C
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF-GLKPDMYACSSILTSCASLH 364
Query: 348 MVNEGLMYFDMMTKEYNVEPRLEH----YGCLVDLFARAGRIQEALNLVSEMPIKPDAVI 403
+ F Y ++ L + L+D++A+ + +A V ++ D V+
Sbjct: 365 ALG-----FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK-VFDIFAAADVVL 418
Query: 404 WRSLLDACCKQDASVELGEEM 424
+ ++++ + EL E +
Sbjct: 419 FNAMIEGYSRLGTQWELHEAL 439
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 273/508 (53%), Gaps = 52/508 (10%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHY--YSSLADLNYATRLFHHFGKPNSFM 91
+MS L +IH + + P S+ L + SS D++YA + P ++
Sbjct: 20 SMSELYKIHTLLITLGLSEEEP----FVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG 75
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN +IR ++ S N ++I +Y + M+ ++PDH T+PF++K+ + + G +H
Sbjct: 76 WNFVIRGFSNSRN-PEKSISVY---IQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 152 AQLLKLGYESDTRICNSLIHF-------------------------------YATCGCLD 180
++K G E D ICN+LIH YA G +
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL--HDPDGYTMQSVISAC 238
A +F MSE+ V+W+ M+D YV+ GE++ AL++F +M+++ + TM SVI AC
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
A LGAL+ G H Y++ D ++ V++ T L+DMY KCGS+ A VF R ++ +
Sbjct: 252 AHLGALNRGKTVHRYIL---DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETD 308
Query: 299 S--WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ WN+II G + HG +L F +M + K P+ ITF+ +L+AC+H G+V E +F
Sbjct: 309 ALMWNAIIGGLASHGFIRESLQLFHKM-RESKIDPDEITFLCLLAACSHGGLVKEAWHFF 367
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+ KE EP+ EHY C+VD+ +RAG +++A + +SEMPIKP + +LL+ C
Sbjct: 368 KSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINH-G 425
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
++EL E + K++ E++ G YV L+ +YA ++ +R+ M KGV K G S+
Sbjct: 426 NLELAETVGKKLIELQPH-NDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
Query: 477 IEIDGVAHEFFAGDTTHPKSEDIYKFLN 504
+++DG H F A D TH S+ IY L
Sbjct: 485 LDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 281/513 (54%), Gaps = 55/513 (10%)
Query: 35 MSHLKQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
M+ +KQ+HA LRT +D T L R+L + +L YA +LF H +F++N
Sbjct: 1 MNGIKQLHAHCLRTGVDETKD-----LLQRLL----LIPNLVYARKLFDHHQNSCTFLYN 51
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
LI+AY + H++I LY L+ + + P H+TF F+ A A S + +H+Q
Sbjct: 52 KLIQAYY-VHHQPHESIVLYN---LLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQ 107
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
+ G+ESD+ C +LI YA G L A ++F MS++ WN M+ Y R G+ A
Sbjct: 108 FFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAA 167
Query: 214 LKVFGEM------------------------LKLH---------DPDGYTMQSVISACAG 240
+++F M LK+ P+ T+ SV+ ACA
Sbjct: 168 MELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACAN 227
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP-YRDVNS 299
LG L +G Y + ++ V ++MY KCG +++A+++FE + R++ S
Sbjct: 228 LGELEIGRRLEGYAR---ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 284
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
WNS+I + HGK + AL F +M++ E P+++TFVG+L AC H GMV +G F M
Sbjct: 285 WNSMIGSLATHGKHDEALTLFAQMLR-EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 343
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ + + P+LEHYGC++DL R G++QEA +L+ MP+KPDAV+W +LL AC +VE
Sbjct: 344 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH-GNVE 402
Query: 420 LGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS-LIE 478
+ E ++ +F++E + G V++S +YA+ +W+ V +RKLM + +TK G S +E
Sbjct: 403 IAEIASEALFKLEPT-NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVE 461
Query: 479 IDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
+ H+F D +HP+S +IY+ L EI +++
Sbjct: 462 VGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 243/443 (54%), Gaps = 19/443 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
KQIH + +++ + ++H+Y + A ++F + W +I
Sbjct: 126 KQIHG----IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+ R+ +K +A++ + M +V P+ T+ VL + L GK +H +LK
Sbjct: 182 FTRTGLYK-EALDTFSKM------DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
N+LI Y C L A+++F + +K +VSWN M+ V A+ +F
Sbjct: 235 SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFS 294
Query: 219 EMLKLH--DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
M PDG+ + SV+SACA LGA+ G W H Y++ + D + T +VDMY
Sbjct: 295 LMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA---GIKWDTHIGTAIVDMY 351
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCG +E A ++F + ++V +WN+++ G ++HG +L YF MVK+ F PN +TF
Sbjct: 352 AKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL-GFKPNLVTF 410
Query: 337 VGVLSACNHRGMVNEGLMYF-DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
+ L+AC H G+V+EG YF M ++EYN+ P+LEHYGC++DL RAG + EAL LV M
Sbjct: 411 LAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNE 455
P+KPD I ++L AC + +EL +E+ +IE SG YVLLS ++A+ RW++
Sbjct: 471 PVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFED-SGVYVLLSNIFAANRRWDD 529
Query: 456 VGLLRKLMSDKGVTKKPGCSLIE 478
V +R+LM KG++K PG S IE
Sbjct: 530 VARIRRLMKVKGISKVPGSSYIE 552
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 187/402 (46%), Gaps = 28/402 (6%)
Query: 38 LKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADL-NYATRLFHHFGKP-NSFMWNTL 95
KQI Q + T + + + ++++ + AD +Y++ + H +SF +NTL
Sbjct: 22 FKQIQTQLI----TRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTL 77
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
+ +YA + I YK + PD +TFP V KAC + EGKQ+H +
Sbjct: 78 LSSYA-VCDKPRVTIFAYKTFV---SNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
K+G+ D + NSL+HFY CG A K+F M + VSW ++ + R G + AL
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 216 VFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
F +M +P+ T V+ + +G LSLG H ++K+ + L+DM
Sbjct: 194 TFSKMDV--EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS---LISLETGNALIDM 248
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y KC L A +VF + +D SWNS+I G +++ A+D F M P+
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLE---HYG-CLVDLFARAGRIQEALNL 391
VLSAC G V+ G EY + ++ H G +VD++A+ G I+ AL +
Sbjct: 309 LTSVLSACASLGAVDHG-----RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 392 VSEMPIKPDAVIWRSLLDACCKQD---ASVELGEEMAKQVFE 430
+ + K + W +LL S+ EEM K F+
Sbjct: 364 FNGIRSK-NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/441 (34%), Positives = 247/441 (56%), Gaps = 14/441 (3%)
Query: 68 YSSLADLNYATRLFHHF--GKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVV 125
Y DL+ A +F G WN++ +AY+ +A + + LM+ EE
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG----EAFDAFGLYCLMLREEFK 253
Query: 126 PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKI 185
PD TF + +C + +L +G+ +H+ + LG + D N+ I Y+ A +
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 186 FQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGAL 244
F M+ ++ VSW VM+ Y G+ D AL +F M+K + PD T+ S+IS C G+L
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 245 SLGMWAHAYV-MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSI 303
G W A + C ++ +V++ L+DMY KCGS+ A+ +F+ P + V +W ++
Sbjct: 374 ETGKWIDARADIYGCKRD---NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 304 ILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEY 363
I G++++G AL F +M+ ++ + PN ITF+ VL AC H G + +G YF +M + Y
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 364 NVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEE 423
N+ P L+HY C+VDL R G+++EAL L+ M KPDA IW +LL+A CK +V++ E+
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA-CKIHRNVKIAEQ 548
Query: 424 MAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVA 483
A+ +F +E + + YV ++ +YA+A W+ +R +M + + K PG S+I+++G
Sbjct: 549 AAESLFNLEPQM-AAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 484 HEFFAGDTTHPKSEDIYKFLN 504
H F G+ H ++E IY LN
Sbjct: 608 HSFTVGEHGHVENEVIYFTLN 628
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 55/385 (14%)
Query: 79 RLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKAC 138
RL+ G + WN IR A + N +++ L++ M E P+++TFPFV KAC
Sbjct: 7 RLYRISGLSSVNAWNLQIRE-AVNRNDPVESLLLFREMKRGGFE---PNNFTFPFVAKAC 62
Query: 139 AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWN 198
A + + VHA L+K + SD + + + + C +D A K+F+ M E+ +WN
Sbjct: 63 ARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 199 VMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKK 257
M+ + ++G D A +F EM L PD T+ ++I + + +L L HA ++
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR- 181
Query: 258 CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY--RDVNSWNSIILGFSMHGKAEA 315
V V V + Y KCG L+ A+ VFE + R V SWNS+ +S+ G+A
Sbjct: 182 --LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 316 ALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL---------------------- 353
A + M++ E+F P+ TF+ + ++C + + +G
Sbjct: 240 AFGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFI 298
Query: 354 -MY------------FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PI 397
MY FD+MT V + ++ +A G + EAL L M
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVS-----WTVMISGYAEKGDMDEALALFHAMIKSGE 353
Query: 398 KPDAVIWRSLLDACCKQDASVELGE 422
KPD V SL+ C K S+E G+
Sbjct: 354 KPDLVTLLSLISGCGKF-GSLETGK 377
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 174/366 (47%), Gaps = 36/366 (9%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ + + + ++YA ++F + ++ WN ++ + +S H +A L++ M
Sbjct: 87 VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG-HTDKAFSLFREMR 145
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
L E+ PD T ++++ + SL + +HA ++LG + + N+ I Y CG
Sbjct: 146 L---NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCG 202
Query: 178 CLDMALKIFQ--NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSV 234
LD A +F+ + +++ VSWN M +Y GE A ++ ML+ PD T ++
Sbjct: 203 DLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINL 262
Query: 235 ISACAGLGALSLGMWAHAYVMK-KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
++C L+ G H++ + D+++ A +NT + MY K A+ +F+ M
Sbjct: 263 AASCQNPETLTQGRLIHSHAIHLGTDQDIEA---INT-FISMYSKSEDTCSARLLFDIMT 318
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI-EKFVPNSITFVGVLSACNHRGMVNEG 352
R SW +I G++ G + AL F M+K EK P+ +T + ++S C G + G
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK--PDLVTLLSLISGCGKFGSLETG 376
Query: 353 LMYFDMMTKEYNVEPRLEHYGC----------LVDLFARAGRIQEALNLVSEMPIKPDAV 402
++ R + YGC L+D++++ G I EA ++ P K V
Sbjct: 377 KW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT-VV 425
Query: 403 IWRSLL 408
W +++
Sbjct: 426 TWTTMI 431
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ YS ++ A +F + + W T+I YA + +E K M++ +
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF----LEALKLFSKMIDLD 454
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQ---VHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
P+H TF VL+ACAH+ SL +G + + Q+ + D C ++ G L+
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC--MVDLLGRKGKLE 512
Query: 181 MALKIFQNMSEKSEVS-WNVMVDS 203
AL++ +NMS K + W ++++
Sbjct: 513 EALELIRNMSAKPDAGIWGALLNA 536
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 243/458 (53%), Gaps = 11/458 (2%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L + ++ YS LN A ++F G NS W+ ++ Y+++ +++E K M
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG----ESLEAVKLFSRM 313
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
+ P YT VL AC+ L EGKQ+H+ LLKLG+E +L+ YA GCL
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISAC 238
A K F + E+ W ++ YV+ + + AL ++ M P+ TM SV+ AC
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
+ L L LG H + +K +V + + L MY KCGSLE VF R P +DV
Sbjct: 434 SSLATLELGKQVHGHTIKH---GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
SWN++I G S +G+ + AL+ F M+ E P+ +TFV ++SAC+H+G V G YF+M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLA-EGMEPDDVTFVNIISACSHKGFVERGWFYFNM 549
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
M+ + ++P+++HY C+VDL +RAG+++EA + I +WR LL A CK
Sbjct: 550 MSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSA-CKNHGKC 608
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
ELG +++ + GS S YV LS +Y + R +V + K M GV+K+ GCS IE
Sbjct: 609 ELGVYAGEKLMAL-GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667
Query: 479 IDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYL 516
+ H F GDT HP E+ + + ++ G++
Sbjct: 668 LKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFV 705
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 182/377 (48%), Gaps = 18/377 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+ +H Q +RT +T A L +++Y+ L A +F+ + WN+LI
Sbjct: 34 RAVHGQIIRTGASTCIQHANVL----VNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 99 YARSA--NHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
Y+++ + + ++L++ M ++++P+ YT + KA + S G+Q HA ++K
Sbjct: 90 YSQNGGISSSYTVMQLFREMR---AQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
+ D + SL+ Y G ++ LK+F M E++ +W+ MV Y G + A+KV
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 217 FGEMLKLHDPDG---YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
F L+ + Y +V+S+ A + LG H +K + V ++ LV
Sbjct: 207 FNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK---NGLLGFVALSNALV 263
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
MY KC SL A ++F+ R+ +W++++ G+S +G++ A+ F RM P+
Sbjct: 264 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS-AGIKPSE 322
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
T VGVL+AC+ + EG + K E L LVD++A+AG + +A
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 394 EMPIKPDAVIWRSLLDA 410
+ + D +W SL+
Sbjct: 382 CLQ-ERDVALWTSLISG 397
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 59/338 (17%)
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
+ E+ P T L + +L G+ VH Q+++ G + + N L++FYA CG L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFD---TALKVFGEMLKLHD--PDGYTMQSVI 235
A IF + K VSWN ++ Y + G T +++F EM + D P+ YT+ +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIF 125
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
A + L + ++G AHA V+K D+ V+T LV MYCK G +E +VF MP R
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSS---FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 296 DVNSWNSIILGFSMHGKAEAAL----------------DYFFRMV--------------- 324
+ +W++++ G++ G+ E A+ DY F V
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 325 --------KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLV 376
+ FV S V + S C +NE FD ++ + +V
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCES---LNEACKMFDSSGDRNSIT-----WSAMV 294
Query: 377 DLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDAC 411
+++ G EA+ L S M IKP +L+AC
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 272/540 (50%), Gaps = 52/540 (9%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
Q+H +++ TN +++ S ++ Y+ ++ A L + WN++I
Sbjct: 248 QVHCCIVKSGFKTN----IYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE-GKQVHAQLLKLG 158
R +A+ ++ M E ++ D +T P +L A + + + H ++K G
Sbjct: 304 VRQG-LIGEALSMFGRMH---ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTG 359
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
Y + + N+L+ YA G +D ALK+F+ M EK +SW +V G +D ALK+F
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 219 EM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M + PD SV+SA A L L G H +K + + VN LV MY
Sbjct: 420 NMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS---GFPSSLSVNNSLVTMYT 476
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
KCGSLE A +F M RD+ +W +I+G++ +G
Sbjct: 477 KCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG-------------------------- 510
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
++ + YFD M Y + P EHY C++DLF R+G + L+ +M +
Sbjct: 511 ----------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEV 560
Query: 398 KPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVG 457
+PDA +W+++L A ++ ++E GE AK + E+E + + YV LS +Y++A R +E
Sbjct: 561 EPDATVWKAIL-AASRKHGNIENGERAAKTLMELEPN-NAVPYVQLSNMYSAAGRQDEAA 618
Query: 458 LLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLP 517
+R+LM + ++K+PGCS +E G H F + D HP+ +IY ++E+ ++ GY
Sbjct: 619 NVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFA 678
Query: 518 DYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLI 577
D S A L D +GK+ L HSE+LA+AFGLL G PIR+ KNLRVC DCH KL+
Sbjct: 679 DMSFA-LHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 174/363 (47%), Gaps = 33/363 (9%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F ++ ++ YS+ L+ A +LF N+ WN LI Y +S + +E +
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSK----VEAFNLFWE 115
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M + + P+ YT VL+ C L G+Q+H +K G++ D + N L+ YA C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 179 LDMALKIFQNM-SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVIS 236
+ A +F+ M EK+ V+W M+ Y + G A++ F ++ + + + YT SV++
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
ACA + A +G+ H ++K K ++ V + L+DMY KC +E A+ + E M D
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFK---TNIYVQSALIDMYAKCREMESARALLEGMEVDD 292
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRM----VKIEKFVPNSITFVGVLS-------ACNH 345
V SWNS+I+G G AL F RM +KI+ F SI LS + H
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAH 352
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR 405
+V G + ++ LVD++A+ G + AL + M I+ D + W
Sbjct: 353 CLIVKTGYATYKLVNN------------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWT 399
Query: 406 SLL 408
+L+
Sbjct: 400 ALV 402
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 25/377 (6%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHF-GKPNSFMWNTLIR 97
+QIH T++T + + + +L Y+ ++ A LF G+ N+ W +++
Sbjct: 145 EQIHGHTIKT----GFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
Y+++ +AIE ++ + E + YTFP VL ACA + G QVH ++K
Sbjct: 201 GYSQNG-FAFKAIECFRDLR---REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
G++++ + ++LI YA C ++ A + + M VSWN M+ VR G AL +F
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 218 GEM----LKLHDPDGYTMQSVISACAGLG--ALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
G M +K+ D +T+ S+++ C L + + AH ++K A LVN
Sbjct: 317 GRMHERDMKIDD---FTIPSILN-CFALSRTEMKIASSAHCLIVK---TGYATYKLVNNA 369
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
LVDMY K G ++ A +VFE M +DV SW +++ G + +G + AL F M ++ P
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM-RVGGITP 428
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ I VLSA ++ G K L LV ++ + G +++A +
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 392 VSEMPIKPDAVIWRSLL 408
+ M I+ D + W L+
Sbjct: 488 FNSMEIR-DLITWTCLI 503
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
E D N++I Y+ L A K+F++ K+ +SWN ++ Y ++G A +F E
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 220 MLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
M P+ YT+ SV+ C L L G H + +K DV V L+ MY +
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK---TGFDLDVNVVNGLLAMYAQ 172
Query: 279 CGSLEIAQQVFERMPYRDVN-SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
C + A+ +FE M N +W S++ G+S +G A A++ FR ++ E N TF
Sbjct: 173 CKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE-CFRDLRREGNQSNQYTFP 231
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
VL+AC G+ + K + + L+D++A+ ++ A L+ M +
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEV 290
Query: 398 KPDAVIWRSLLDACCKQ 414
D V W S++ C +Q
Sbjct: 291 D-DVVSWNSMIVGCVRQ 306
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 253/475 (53%), Gaps = 17/475 (3%)
Query: 31 GIITMSHLKQIHAQTL-RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNS 89
G+ + + K IH + R TT L + + + Y+ ++ LF + + +
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTT-----LCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 90 FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQ 149
W +LI AY R Q ++ + + M +V P+ TF + ACA L G+Q
Sbjct: 276 VSWTSLIVAYKRIG----QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ 331
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
+H +L LG + NS++ Y+TCG L A +FQ M + +SW+ ++ Y +AG
Sbjct: 332 LHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGF 391
Query: 210 FDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+ K F M + P + + S++S + + G HA + C + + V
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL--C-FGLEQNSTV 448
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+ L++MY KCGS++ A +F D+ S ++I G++ HGK++ A+D F + +K+
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV-G 507
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
F P+S+TF+ VL+AC H G ++ G YF+MM + YN+ P EHYGC+VDL RAGR+ +A
Sbjct: 508 FRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDA 567
Query: 389 LNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA 448
+++EM K D V+W +LL A CK +E G A+++ E++ + C+ A V L+ +Y+
Sbjct: 568 EKMINEMSWKKDDVVWTTLLIA-CKAKGDIERGRRAAERILELDPT-CATALVTLANIYS 625
Query: 449 SASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFL 503
S E +RK M KGV K+PG S I+I F +GD HP+SEDIY L
Sbjct: 626 STGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 180/389 (46%), Gaps = 25/389 (6%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
++ +I Q + D +H ++L + +L A ++F + W ++I
Sbjct: 29 NIVRISNQVMVKFDPNSHLRSLI----------NAGNLRAARQVFDKMPHGDIVSWTSII 78
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
+ Y +AN+ +A+ L+ AM ++ + V PD VLKAC + ++ G+ +HA +K
Sbjct: 79 KRYV-TANNSDEALILFSAMRVV-DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVK 136
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
S + +SL+ Y G +D + ++F M ++ V+W ++ V AG + L
Sbjct: 137 TSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTY 196
Query: 217 FGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
F EM + + D YT + ACAGL + G H +V+ + + V L M
Sbjct: 197 FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV---RGFVTTLCVANSLATM 253
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y +CG ++ +FE M RDV SW S+I+ + G+ A++ F +M + + PN T
Sbjct: 254 YTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM-RNSQVPPNEQT 312
Query: 336 FVGVLSACNHRGMVNEG-LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSE 394
F + SAC + G ++ ++++ N L ++ +++ G + A L
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLSLGLN--DSLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 395 MPIKPDAVIWRSLLDACCKQDASVELGEE 423
M + D + W +++ C+ GEE
Sbjct: 371 MRCR-DIISWSTIIGGYCQAG----FGEE 394
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 166/361 (45%), Gaps = 14/361 (3%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNT 94
+++ + +HA ++T + ++++ S +L Y + ++ + R+F N+ W
Sbjct: 124 IAYGESLHAYAVKT----SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTA 179
Query: 95 LIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
+I + +K + M E + D YTF LKACA + GK +H +
Sbjct: 180 IITGLVHAGRYKEGLTYFSE----MSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+ G+ + + NSL Y CG + L +F+NMSE+ VSW ++ +Y R G+ A+
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 215 KVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
+ F +M P+ T S+ SACA L L G H V+ + + V+ ++
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL---SLGLNDSLSVSNSMM 352
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
MY CG+L A +F+ M RD+ SW++II G+ G E YF M + P
Sbjct: 353 KMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM-RQSGTKPTD 411
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+LS + ++ EG + + +E L++++++ G I+EA +
Sbjct: 412 FALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG 470
Query: 394 E 394
E
Sbjct: 471 E 471
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 252/470 (53%), Gaps = 27/470 (5%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
Q+H+Q R +++ + ++ Y+ + A F + W LI Y
Sbjct: 99 QLHSQIWRF----GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGY 154
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
R EL A L + V D + ++ + + +++ ++
Sbjct: 155 IRCG-------ELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV 207
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
+ T ++IH Y +D A K+F M E++ VSWN M+ Y + + +++F E
Sbjct: 208 ITWT----TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQE 263
Query: 220 MLKLH--DPDGYTMQSVISACAGLGALSLGMWAHAYVM-KKCDKNVAADVLVNTCLVDMY 276
M DPD T+ SV+ A + GALSLG W H +V KK DK V V T ++DMY
Sbjct: 264 MQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVK----VCTAILDMY 319
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCG +E A+++F+ MP + V SWN++I G++++G A AALD F M+ EK P+ IT
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK--PDEITM 377
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
+ V++ACNH G+V EG +F +M +E + ++EHYGC+VDL RAG ++EA +L++ MP
Sbjct: 378 LAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
+P+ +I S L AC Q +E E + K+ E+E G YVLL LYA+ RW++
Sbjct: 437 FEPNGIILSSFLSAC-GQYKDIERAERILKKAVELEPQ-NDGNYVLLRNLYAADKRWDDF 494
Query: 457 GLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
G+++ +M K+ GCSLIEI+ + EF +GDTTHP I+ L ++
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDL 544
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 176/350 (50%), Gaps = 15/350 (4%)
Query: 60 LYSRILHYYSSLADLNYATRLF-HHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
++++ L +S + YA +LF + +SF+ N++I+AY + + + LY+ L
Sbjct: 12 IFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYP-DSFALYRD--L 68
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
E PD++TF + K+C+ + + +G Q+H+Q+ + G+ +D + ++ YA G
Sbjct: 69 RKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK 128
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISAC 238
+ A F M +SEVSW ++ Y+R GE D A K+F +M + D VI
Sbjct: 129 MGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKD-------VVIYNA 181
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
G + G A + D+ V+ T ++ YC ++ A+++F+ MP R++
Sbjct: 182 MMDGFVKSGDMTSAR--RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
SWN++I G+ + + + + F M P+ +T + VL A + G ++ G +
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHC 298
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ ++ +++ ++D++++ G I++A + EMP K A W +++
Sbjct: 299 FVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS-WNAMI 347
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 234/401 (58%), Gaps = 11/401 (2%)
Query: 76 YATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVL 135
+ +R+ + P +F+WN ++R+Y R + AI++Y + M+ V+PD Y+ P V+
Sbjct: 71 FRSRILDQY--PIAFLWNNIMRSYIRHES-PLDAIQVY---LGMVRSTVLPDRYSLPIVI 124
Query: 136 KACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEV 195
KA GK++H+ ++LG+ D + I Y G + A K+F E+
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLG 184
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYV 254
SWN ++ AG + A+++F +M + +PD +TM SV ++C GLG LSL H V
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 255 MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAE 314
++ + +D+++ L+DMY KCG +++A +FE M R+V SW+S+I+G++ +G
Sbjct: 245 LQAKTEE-KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTL 303
Query: 315 AALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGC 374
AL+ F +M + PN ITFVGVLSAC H G+V EG YF MM E+ +EP L HYGC
Sbjct: 304 EALECFRQMREF-GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGC 362
Query: 375 LVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGS 434
+VDL +R G+++EA +V EMP+KP+ ++W L+ C++ VE+ E +A + E+E
Sbjct: 363 IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG-CEKFGDVEMAEWVAPYMVELE-P 420
Query: 435 VCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
G YV+L+ +YA W +V +RKLM K V K P S
Sbjct: 421 WNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 15/234 (6%)
Query: 31 GIITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSF 90
G+ +S Q+H L+ T + + + ++ Y ++ A+ +F + N
Sbjct: 230 GLGDLSLAFQLHKCVLQA--KTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
W+++I YA + N +A+E ++ M E V P+ TF VL AC H + EGK
Sbjct: 288 SWSSMIVGYAANGN-TLEALECFRQ---MREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
Query: 151 HAQLLKLGYESDTRICN--SLIHFYATCGCLDMALKIFQNMSEKSEV-SWNVMVDSYVRA 207
A ++K +E + + + ++ + G L A K+ + M K V W ++ +
Sbjct: 344 FA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKF 402
Query: 208 GEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
G+ + A V M++L + V A + AL GMW ++K K
Sbjct: 403 GDVEMAEWVAPYMVELEPWN----DGVYVVLANVYALR-GMWKDVERVRKLMKT 451
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 236/427 (55%), Gaps = 13/427 (3%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ Y+ + YA +LF + ++ WN++I Y+ A + A++L++ M EE
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS-EAGYAKDAMDLFRKME---EEG 228
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
PD T +L AC+H L G+ + + T + + LI Y CG LD A
Sbjct: 229 FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSAR 288
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLG 242
++F M +K V+W M+ Y + G+ A K+F EM K PD T+ +V+SAC +G
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
AL LG + + ++ ++ V T LVDMY KCG +E A +VFE MP ++ +WN+
Sbjct: 349 ALELGKQIETHA---SELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNA 405
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
+I ++ G A+ AL F RM P+ ITF+GVLSAC H G+V++G YF M+
Sbjct: 406 MITAYAHQGHAKEALLLFDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSM 461
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGE 422
+ + P++EHY ++DL +RAG + EA + P KPD ++ ++L AC K+ V + E
Sbjct: 462 FGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRK-DVAIRE 520
Query: 423 EMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGV 482
+ + + E++ + +G YV+ S + A W+E +R LM D+GV K PGCS IEI+G
Sbjct: 521 KAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGE 580
Query: 483 AHEFFAG 489
EF AG
Sbjct: 581 LMEFLAG 587
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 200/388 (51%), Gaps = 18/388 (4%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
I+++ L+QI AQ L + + P FL + + L D NY++ LF +PN + +
Sbjct: 48 ISVNQLRQIQAQML--LHSVEKPN--FLIPKAVE----LGDFNYSSFLFSVTEEPNHYSF 99
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N +IR + N A+ LY+ M + PD +T+ FV ACA + G+ VH+
Sbjct: 100 NYMIRGLTNTWNDHEAALSLYRRMKF---SGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
L K+G E D I +SLI YA CG + A K+F ++E+ VSWN M+ Y AG
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 213 ALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
A+ +F +M + +PD T+ S++ AC+ LG L G + K + + +
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAIT---KKIGLSTFLGSK 273
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
L+ MY KCG L+ A++VF +M +D +W ++I +S +GK+ A FF M K P
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT-GVSP 332
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
++ T VLSAC G + G + E +++ + LVD++ + GR++EAL +
Sbjct: 333 DAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVE 419
MP+K +A W +++ A Q + E
Sbjct: 392 FEAMPVKNEAT-WNAMITAYAHQGHAKE 418
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 257/484 (53%), Gaps = 47/484 (9%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
++ + ++ Y+SL + ++F + + WN LI +Y + + AI ++K M
Sbjct: 82 YVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE-DAIGVFKRMS- 139
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
E + D T L AC+ +L G++++ + + +E RI N+L+ + CGC
Sbjct: 140 -QESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGC 197
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA------------------------L 214
LD A +F +M +K+ W MV YV G D A
Sbjct: 198 LDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQF 257
Query: 215 KVFGEMLKLHD--------PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
F E L+L PD + + S+++ CA GAL G W H Y+ + V D
Sbjct: 258 NRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN---ENRVTVDK 314
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI 326
+V T LVDMY KCG +E A +VF + RD SW S+I G +M+G + ALD ++ M +
Sbjct: 315 VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENV 374
Query: 327 EKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQ 386
+ ++ITFV VL+ACNH G V EG F MT+ +NV+P+ EH CL+DL RAG +
Sbjct: 375 GVRL-DAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433
Query: 387 EALNLVSEMPIKPDAV---IWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLL 443
EA L+ +M + D ++ SLL A + +V++ E +A+++ ++E S S A+ LL
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSA-ARNYGNVKIAERVAEKLEKVEVSD-SSAHTLL 491
Query: 444 SKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDT--THPKSEDIYK 501
+ +YASA+RW +V +R+ M D G+ K PGCS IEIDGV HEF GD +HPK ++I
Sbjct: 492 ASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINS 551
Query: 502 FLNE 505
L++
Sbjct: 552 MLHQ 555
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 170/357 (47%), Gaps = 48/357 (13%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME---EEVVPDHYTFPFVLKACAHTFS 143
P+ M+N ++++ A + K + L E + + PD++T P VLK+
Sbjct: 9 PSLLMYNKMLKSLADGKS-------FTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRK 61
Query: 144 LCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDS 203
+ EG++VH +K G E D+ + NSL+ YA+ G +++ K+F M ++ VSWN ++ S
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 204 YVRAGEFDTALKVFGEMLKLHDP--DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
YV G F+ A+ VF M + + D T+ S +SAC+ L L +G + +V+ + + +
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS 181
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYF- 320
V + LVDM+CKCG L+ A+ VF+ M ++V W S++ G+ G+ + A F
Sbjct: 182 VR----IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFE 237
Query: 321 -----------------------------FRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
FR ++ P++ V +L+ C G + +
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
G + E V LVD++A+ G I+ AL + E+ + D W SL+
Sbjct: 298 G-KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLI 352
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 282/573 (49%), Gaps = 112/573 (19%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++ +KQ+HAQ +R N + L + +++ S N A R+F+ +PN + N
Sbjct: 31 NLNQVKQLHAQIIRR----NLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCN 86
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK----------------- 136
+LIRA+A+++ +QA ++ M + D++T+PF+LK
Sbjct: 87 SLIRAHAQNS-QPYQAFFVFSEMQRF---GLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 137 --------------ACAHTFSLCEGKQVH---------------------AQLLKLGYES 161
A +S C G V L+K G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 162 DTRIC------------NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
D R N+++ YA C + A ++F+ M E++ VSW+ MV Y +AG+
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 262
Query: 210 FDTALKVFGEM----------------------LKLHDP------------DGYTMQSVI 235
+ A +F +M LK D D + S++
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
+AC G LSLGM H+ ++K+ N+ ++ V L+DMY KCG+L+ A VF +P +
Sbjct: 323 AACTESGLLSLGMRIHS-ILKR--SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
D+ SWN+++ G +HG + A++ F RM + E P+ +TF+ VL +CNH G+++EG+ Y
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRR-EGIRPDKVTFIAVLCSCNHAGLIDEGIDY 438
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD 415
F M K Y++ P++EHYGCLVDL R GR++EA+ +V MP++P+ VIW +LL A C+
Sbjct: 439 FYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA-CRMH 497
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
V++ +E+ + +++ G Y LLS +YA+A W V +R M GV K G S
Sbjct: 498 NEVDIAKEVLDNLVKLD-PCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
Query: 476 LIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDE 508
+E++ HEF D +HPKS+ IY+ L + E
Sbjct: 557 SVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 139/297 (46%), Gaps = 19/297 (6%)
Query: 135 LKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE 194
L CA+ L + KQ+HAQ+++ D I LI + C ++A+++F + E +
Sbjct: 26 LPKCAN---LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAY 253
N ++ ++ + + A VF EM + D +T ++ AC+G L + H +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 254 VMKKCDKNVAADVLVNTCLVDMYCKCGSLEI--AQQVFERMPYRDVNSWNSIILGFSMHG 311
+ K +++D+ V L+D Y +CG L + A ++FE+M RD SWNS++ G G
Sbjct: 143 IEK---LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAG 199
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH 371
+ A F M + + N T + + C +++ F+ M + V
Sbjct: 200 ELRDARRLFDEMPQRDLISWN--TMLDGYARCRE---MSKAFELFEKMPERNTVS----- 249
Query: 372 YGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQV 428
+ +V +++AG ++ A + +MP+ V+ +++ A + ++ + + Q+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 265/527 (50%), Gaps = 61/527 (11%)
Query: 35 MSHLKQIHAQTLRT--IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
+S +KQIH + + + N +L++ ++ +Y L + A ++F P+ +
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGN-----YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSF 200
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N +I YA+ +A++LY M+ + + PD YT +L C H + GK VH
Sbjct: 201 NVMIVGYAKQG-FSLEALKLY---FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 153 QLLKLG--YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
+ + G Y S+ + N+L+ Y C +A + F M +K SWN MV +VR G+
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 211 DTALKVFGEMLKLH----------------------------------DPDGYTMQSVIS 236
+ A VF +M K PD TM S+IS
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
A G LS G W H V++ + D +++ L+DMYCKCG +E A VF+ +D
Sbjct: 377 GAANNGELSHGRWVHGLVIRL---QLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKD 433
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V W S+I G + HG + AL F RM + E PN++T + VL+AC+H G+V EGL F
Sbjct: 434 VALWTSMITGLAFHGNGQQALQLFGRMQE-EGVTPNNVTLLAVLTACSHSGLVEEGLHVF 492
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS-EMPIKPDAVIWRSLLDACCKQD 415
+ M ++ +P EHYG LVDL RAGR++EA ++V +MP++P +W S+L A C+
Sbjct: 493 NHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA-CRGG 551
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPG-C 474
+E E ++ ++E G YVLLS +YA+ RW R+ M ++GV K G
Sbjct: 552 EDIETAELALTELLKLEPEK-EGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Query: 475 SLIEIDGVAHEFFAGD-TTHPKSEDIYKFL----NEIDEKLESMGYL 516
S++ ++G+ H F A + HP+ +I + L NE+ KL+ + L
Sbjct: 611 SVVGVEGL-HRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLDCLDLL 656
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 193/385 (50%), Gaps = 24/385 (6%)
Query: 36 SHLKQIHAQTLR-TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG-KPNSFMWN 93
+ KQ+ AQ +R + P + ++ + Y +L+ A LF +F PN F++N
Sbjct: 48 NQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPE---NLDLAKLLFLNFTPNPNVFVYN 104
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
T+I A + S K++ LY +M+ V PD TF +++KA + L E KQ+H
Sbjct: 105 TMISAVSSS---KNECFGLYSSMI---RHRVSPDRQTFLYLMKASSF---LSEVKQIHCH 155
Query: 154 LLKLGYES-DTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
++ G S + NSL+ FY G +A K+F M S+NVM+ Y + G
Sbjct: 156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE 215
Query: 213 ALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
ALK++ +M+ +PD YT+ S++ C L + LG H ++ ++ +++++++
Sbjct: 216 ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR-GPVYSSNLILSNA 274
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
L+DMY KC +A++ F+ M +D+ SWN++++GF G EAA F +M K +
Sbjct: 275 LLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSW 334
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL-- 389
NS+ F C+ R V E ++++M E V+P L+ A G +
Sbjct: 335 NSLLFGYSKKGCDQR-TVRE--LFYEMTIVE-KVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 390 -NLVSEMPIKPDAVIWRSLLDACCK 413
LV + +K DA + +L+D CK
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCK 415
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 262/511 (51%), Gaps = 81/511 (15%)
Query: 38 LKQIHAQTLRTIDTTN-HPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
LKQIHA + +N +YS L S L YA +LF KP+ + N ++
Sbjct: 28 LKQIHASMVVNGLMSNLSVVGELIYSASL---SVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACA----------------- 139
R A+S + + LY M + V PD YTF FVLKAC+
Sbjct: 85 RGSAQSMK-PEKTVSLYTEME---KRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 140 HTFSLCEGKQ-----VHAQLLKLGYESD---------TRICNSLIHFYATCGCLDMALKI 185
H F L E + HA LG S+ +S+ YA G +D A+++
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 186 FQNM-------------------------------SEKSEVSWNVMVDSYVRAGEFDTAL 214
F M +EK V+WN M+ YV G AL
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 215 KVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT--- 270
+F EM + PD T+ S++SACA LG L G H Y+++ +V++ + V T
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA--SVSSSIYVGTPIW 318
Query: 271 -CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
L+DMY KCGS++ A +VF + RD+++WN++I+G ++H AE +++ F M ++ K
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRL-KV 376
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
PN +TF+GV+ AC+H G V+EG YF +M YN+EP ++HYGC+VD+ RAG+++EA
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF 436
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
V M I+P+A++WR+LL A CK +VELG+ +++ + SG YVLLS +YAS
Sbjct: 437 MFVESMKIEPNAIVWRTLLGA-CKIYGNVELGKYANEKLLSMRKDE-SGDYVLLSNIYAS 494
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEID 480
+W+ V +RK+ D V K G SLIE D
Sbjct: 495 TGQWDGVQKVRKMFDDTRVKKPTGVSLIEED 525
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 241/421 (57%), Gaps = 13/421 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F+ S + + Y + A R+F +P+ W ++ A++++ ++ +A+ L+ AM
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE-EALGLFYAMH- 256
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+ +VPD TF VL AC + L +GK++H +L+ G S+ + +SL+ Y CG
Sbjct: 257 -RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS 315
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISAC 238
+ A ++F MS+K+ VSW+ ++ Y + GE + A+++F EM + D Y +V+ AC
Sbjct: 316 VREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM---EEKDLYCFGTVLKAC 372
Query: 239 AGLGALSLGMWAHA-YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
AGL A+ LG H YV + C NV +V + L+D+Y K G ++ A +V+ +M R++
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFGNV----IVESALIDLYGKSGCIDSASRVYSKMSIRNM 428
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
+WN+++ + +G+ E A+ +F MVK + P+ I+F+ +L+AC H GMV+EG YF
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVK-KGIKPDYISFIAILTACGHTGMVDEGRNYFV 487
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
+M K Y ++P EHY C++DL RAG +EA NL+ + DA +W LL C +
Sbjct: 488 LMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADA 547
Query: 418 VELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
+ E +AK++ E+E +YVLLS +Y + R + +RKLM +GV K G S I
Sbjct: 548 SRVAERIAKRMMELEPKY-HMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Query: 478 E 478
+
Sbjct: 607 D 607
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 16/348 (4%)
Query: 108 QAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICN 167
Q E + + E+ + +L+ C FS G Q HA ++K G E+D + N
Sbjct: 41 QLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGN 100
Query: 168 SLIHFYATCG-CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-D 225
SL+ Y G + ++F K +SW M+ YV E AL+VF EM+ D
Sbjct: 101 SLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLD 160
Query: 226 PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
+ +T+ S + AC+ LG + LG H V+ + +++ L +Y A
Sbjct: 161 ANEFTLSSAVKACSELGEVRLGRCFHGVVI---THGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 286 QQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH 345
++VF+ MP DV W +++ FS + E AL F+ M + + VP+ TF VL+AC +
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 346 RGMVNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIW 404
+ +G ++ ++T +E L+D++ + G ++EA + + M K ++V W
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVE--SSLLDMYGKCGSVREARQVFNGMS-KKNSVSW 334
Query: 405 RSLLDACCKQ---DASVELGEEMAKQVFEIEGSV---CSG-AYVLLSK 445
+LL C+ + ++E+ EM ++ G+V C+G A V L K
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGK 382
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 240/477 (50%), Gaps = 46/477 (9%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
T + L +IHA LR H L L + + SL++ +YA R+F H PN ++N
Sbjct: 16 TRTRLPEIHAHLLRHFL---HGSNLLL-AHFISICGSLSNSDYANRVFSHIQNPNVLVFN 71
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
+I+ Y+ +E M + D YT+ +LK+C+ L GK VH +
Sbjct: 72 AMIKCYSLVG----PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGE 127
Query: 154 LLKLGY-------------------------------ESDTRICNSLIHFYATCGCLDMA 182
L++ G+ E + + N +I + G ++
Sbjct: 128 LIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERG 187
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGL 241
L +F+ MSE+S VSWN M+ S + G AL++F EM+ + DPD T+ +V+ A L
Sbjct: 188 LHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASL 247
Query: 242 GALSLGMWAHAYVMKKCDKNVAAD-VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
G L G W H+ + D + V LVD YCK G LE A +F +M R+V SW
Sbjct: 248 GVLDTGKWIHSTAE---SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSW 304
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
N++I G +++GK E +D F M++ K PN TF+GVL+ C++ G V G F +M
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
+ + +E R EHYG +VDL +R+GRI EA + MP+ +A +W SLL A C+ V+L
Sbjct: 365 ERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA-CRSHGDVKL 423
Query: 421 GEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
E A ++ +IE SG YVLLS LYA RW +V +R LM + K G S I
Sbjct: 424 AEVAAMELVKIEPG-NSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 242/473 (51%), Gaps = 16/473 (3%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L L + +L+ Y+ A LF + + W+T+I Y ++ A E
Sbjct: 198 LSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG----AAAEALLVFN 253
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
MM++ P+ T VL+ACA L +G++ H ++ G E++ ++ +L+ Y C
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCF 313
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVI 235
+ A +F + K VSW ++ + G +++ F ML ++ PD M V+
Sbjct: 314 SPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 373
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
+C+ LG L H+YV+K ++ + LV++Y +CGSL A +VF + +
Sbjct: 374 GSCSELGFLEQAKCFHSYVIKY---GFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
D W S+I G+ +HGK AL+ F MVK + PN +TF+ +LSAC+H G+++EGL
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD 415
F +M +Y + P LEHY LVDL R G + A+ + MP P I +LL A C+
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA-CRIH 549
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
+ E+ E +AK++FE+E S +G Y+L+S +Y W V LR + +G+ K S
Sbjct: 550 QNGEMAETVAKKLFELE-SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 608
Query: 476 LIEIDGVAHEFFAGDTTHPKSEDIYKFLNEID----EKLESMGYLPDYSGAHL 524
LIEI H F A D HP+ E +Y L E+D E LE+ Y +Y G L
Sbjct: 609 LIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDLENCVYF-EYEGDSL 660
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 188/352 (53%), Gaps = 9/352 (2%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L++ S +++ Y + A R+F KP+ W++++ + ++ + +QA+E ++ M+
Sbjct: 96 LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGS-PYQAVEFFRRMV 154
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
M +V PD T ++ AC + G+ VH +++ G+ +D + NSL++ YA
Sbjct: 155 --MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSR 212
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVIS 236
A+ +F+ ++EK +SW+ ++ YV+ G AL VF +M+ +P+ T+ V+
Sbjct: 213 AFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQ 272
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
ACA L G H ++ K + +V V+T LVDMY KC S E A VF R+P +D
Sbjct: 273 ACAAAHDLEQGRKTHELAIR---KGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKD 329
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V SW ++I GF+++G A +++ F M+ P++I V VL +C+ G + + +
Sbjct: 330 VVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFH 389
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ K Y + LV+L++R G + A + + + +K D V+W SL+
Sbjct: 390 SYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLI 439
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 173/346 (50%), Gaps = 16/346 (4%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
+SS D A ++F K + + WNTL+++ +R + Q E+ M +E PD
Sbjct: 7 FSSSVD---ARQMFGEMTKRSLYQWNTLLKSLSR----EKQWEEVLYHFSHMFRDEEKPD 59
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLK-LGYESDTRICNSLIHFYATCGCLDMALKIF 186
++T P LKAC + G+ +H + K + SD + +SLI+ Y CG + AL++F
Sbjct: 60 NFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGAL 244
+ + V+W+ MV + + G A++ F M+ D PD T+ +++SAC L
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 179
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSII 304
LG H +V+++ N D+ + L++ Y K + + A +F+ + +DV SW+++I
Sbjct: 180 RLGRCVHGFVIRRGFSN---DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 305 LGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYN 364
+ +G A AL F M+ + PN T + VL AC + +G ++ ++
Sbjct: 237 ACYVQNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-G 294
Query: 365 VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+E ++ LVD++ + +EA + S +P K D V W +L+
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISG 339
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 121/237 (51%), Gaps = 6/237 (2%)
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAG 240
A ++F M+++S WN ++ S R +++ L F M + + PD +T+ + AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
L ++ G H +V K D + +D+ V + L+ MY KCG + A ++F+ + D+ +W
Sbjct: 73 LREVNYGEMIHGFVKK--DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
+S++ GF +G A+++F RMV P+ +T + ++SAC G +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
+ L L++ +A++ +EA+NL +M + D + W +++ AC Q+ +
Sbjct: 191 RR-GFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIAEKDVISWSTVI-ACYVQNGA 244
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 226/402 (56%), Gaps = 7/402 (1%)
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
LM V P+ T+ L AC+ + + EG+Q+HA L K G ES+ I ++L+ Y+ CG
Sbjct: 246 LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
++ A IF++ +E EVS V++ + G + A++ F ML+ + D + +V+
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
+L LG H+ V+K+ + + VN L++MY KCG L +Q VF RMP R+
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKR---KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN 422
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
SWNS+I F+ HG AAL + M +E P +TF+ +L AC+H G++++G
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELL 481
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+ M + + +EPR EHY C++D+ RAG ++EA + + +P+KPD IW++LL AC
Sbjct: 482 NEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFH-G 540
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
E+GE A+Q+F+ S A++L++ +Y+S +W E K M GVTK+ G S
Sbjct: 541 DTEVGEYAAEQLFQTAPD-SSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISS 599
Query: 477 IEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPD 518
IEI+ H F D HP++E IY L+ + + GY PD
Sbjct: 600 IEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPD 641
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 52/423 (12%)
Query: 49 IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQ 108
+D H AL +++ +L Y+ L A +LF + N + + R+
Sbjct: 81 VDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRN-RETES 139
Query: 109 AIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNS 168
L K M+ DH T VL C K +HA + GY+ + + N
Sbjct: 140 GFVLLKRML----GSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNK 195
Query: 169 LIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK-LHDPD 227
LI Y CGC +F MS ++ ++ ++ + + L++F M + L P+
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 228 GYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQ 287
T S ++AC+G + G HA + K + +++ + + L+DMY KCGS+E A
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWK---YGIESELCIESALMDMYSKCGSIEDAWT 312
Query: 288 VFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM----VKIE----------KFVPNS 333
+FE D S I++G + +G E A+ +F RM V+I+ F+ NS
Sbjct: 313 IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNS 372
Query: 334 I------------------TFV--GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYG 373
+ TFV G+++ + G + + F M K V +
Sbjct: 373 LGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS-----WN 427
Query: 374 CLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFE 430
++ FAR G AL L EM +KP V + SLL A C ++ G E+ ++ E
Sbjct: 428 SMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA-CSHVGLIDKGRELLNEMKE 486
Query: 431 IEG 433
+ G
Sbjct: 487 VHG 489
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 11/278 (3%)
Query: 165 ICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH 224
+ NSL+ YA CG L A+K+F M + +S N++ ++R E ++ + ML
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 225 DPDGYTMQSVISACAGLGALSLGMWAHAY-VMKKCDKNVAADVLVNTCLVDMYCKCGSLE 283
D T+ V+S C + HA ++ DK ++ V L+ Y KCG
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEIS----VGNKLITSYFKCGCSV 207
Query: 284 IAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC 343
+ VF+ M +R+V + ++I G + E L F +++ PNS+T++ L+AC
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGL-RLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 344 NHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVI 403
+ + EG ++ K Y +E L L+D++++ G I++A + E + D V
Sbjct: 267 SGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIF-ESTTEVDEVS 324
Query: 404 WRSLLDACCK---QDASVELGEEMAKQVFEIEGSVCSG 438
+L + ++ +++ M + EI+ +V S
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSA 362
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 219/386 (56%), Gaps = 7/386 (1%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
D Y +++C G H LK G+ SD + +SL+ Y G ++ A K+F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK-LHDPDGYTMQSVISACAGLGALS 245
+ M E++ VSW M+ + + D LK++ +M K DP+ YT +++SAC G GAL
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
G H + + + + ++ L+ MYCKCG L+ A ++F++ +DV SWNS+I
Sbjct: 239 QGRSVHCQTLHM---GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G++ HG A A++ F M+ P++IT++GVLS+C H G+V EG +F++M E+ +
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGL 354
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMA 425
+P L HY CLVDL R G +QEAL L+ MP+KP++VIW SLL + C+ V G A
Sbjct: 355 KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFS-CRVHGDVWTGIRAA 413
Query: 426 KQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHE 485
++ +E C+ +V L+ LYAS W E +RKLM DKG+ PGCS IEI+
Sbjct: 414 EERLMLEPD-CAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFM 472
Query: 486 FFAGDTTHPKSEDIYKFLNEIDEKLE 511
F A D ++ + +I L+ + + +E
Sbjct: 473 FKAEDGSNCRMLEIVHVLHCLIDHME 498
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 12/258 (4%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
++L S ++ Y ++ A ++F + N W +I +A+ ++LY M
Sbjct: 155 VYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEW-RVDICLKLYSKMR 213
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+ P+ YTF +L AC + +L +G+ VH Q L +G +S I NSLI Y CG
Sbjct: 214 KSTSD---PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH--DPDGYTMQSVI 235
L A +IF S K VSWN M+ Y + G A+++F M+ PD T V+
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
S+C G + G + + + ++ +CLVD+ + G L+ A ++ E MP +
Sbjct: 331 SSCRHAGLVKEG---RKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK 387
Query: 296 DVNS--WNSIILGFSMHG 311
NS W S++ +HG
Sbjct: 388 P-NSVIWGSLLFSCRVHG 404
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 234/446 (52%), Gaps = 8/446 (1%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAI-ELYKAMMLMMEE 122
+L Y+ L A +LF N +N +I + + +A E +K M M
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 123 EVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMA 182
+ P TF VLKAC+ +L G+Q+HA + K ++SD I ++LI YA G +
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGL 241
++ F + S++ SW M+D +V+ + ++A +F ++ H P+ YT+ ++SACA
Sbjct: 413 MQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADF 472
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
ALS G Y +K + A V T + MY K G++ +A QVF + DV +++
Sbjct: 473 AALSSGEQIQGYAIKS---GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYS 529
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK 361
++I + HG A AL+ F M K PN F+GVL AC H G+V +GL YF M
Sbjct: 530 AMISSLAQHGSANEALNIFESM-KTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKN 588
Query: 362 EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELG 421
+Y + P +H+ CLVDL R GR+ +A NL+ + V WR+LL +C SV +G
Sbjct: 589 DYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSV-IG 647
Query: 422 EEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDG 481
+ +A+++ E+E SG+YVLL +Y + + +R+LM D+GV K+P S I I
Sbjct: 648 KRVAERLMELEPEA-SGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGN 706
Query: 482 VAHEFFAGDTTHPKSEDIYKFLNEID 507
H F D +HP S+ IY L +D
Sbjct: 707 QTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 26/374 (6%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
Y +L +A +LF + N +N+LI Y + ++ QA+EL+ + E + D
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYE-QAMELF---LEAREANLKLD 147
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
+T+ L C L G+ +H ++ G + N LI Y+ CG LD A+ +F
Sbjct: 148 KFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD 207
Query: 188 NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDG-----YTMQSVISACA--- 239
E+ +VSWN ++ YVR G + L + +M + DG Y + SV+ AC
Sbjct: 208 RCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR----DGLNLTTYALGSVLKACCINL 263
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
G + GM H Y K + D++V T L+DMY K GSL+ A ++F MP ++V +
Sbjct: 264 NEGFIEKGMAIHCYTAK---LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVT 320
Query: 300 WNSIILGFSMHGKA--EAALDYFFRMVKIEK--FVPNSITFVGVLSACNHRGMVNEGLMY 355
+N++I GF + EA+ + F + +++ P+ TF VL AC+ + G
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD 415
++ K N + L++L+A G ++ + + K D W S++D C Q+
Sbjct: 381 HALICKN-NFQSDEFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTSMID-CHVQN 437
Query: 416 ASVELGEEMAKQVF 429
+E ++ +Q+F
Sbjct: 438 EQLESAFDLFRQLF 451
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 163/399 (40%), Gaps = 50/399 (12%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
Q +FL + ++ YS L+ A LF + + WN+LI Y R A E
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVG----AAEEPLNL 236
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFS---LCEGKQVHAQLLKLGYESDTRICNSLIHF 172
+ M + + Y VLKAC + + +G +H KLG E D + +L+
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 173 YATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF-----DTALKVFGEMLKLH-DP 226
YA G L A+K+F M K+ V++N M+ +++ E A K+F +M + +P
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
T V+ AC+ L G HA + C N +D + + L+++Y GS E
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALI---CKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 287 QVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHR 346
Q F +D+ SW S+I + + E+A D FR + P T ++SAC
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFD-LFRQLFSSHIRPEEYTVSLMMSACADF 472
Query: 347 GMVNEG-------------------LMYFDMMTKEYNV-----------EPRLEHYGCLV 376
++ G M K N+ P + Y ++
Sbjct: 473 AALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMI 532
Query: 377 DLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACC 412
A+ G EALN+ M IKP+ + +L ACC
Sbjct: 533 SSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 153/315 (48%), Gaps = 25/315 (7%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
D + + + A + S+ GK H ++K + N+L++ Y C L A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM----LKLHDPDGYTMQSVISACAGLG 242
M E++ +S+N ++ Y + G ++ A+++F E LKL D +T + C
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKL---DKFTYAGALGFCGERC 162
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
L LG H V+ ++ V + L+DMY KCG L+ A +F+R RD SWNS
Sbjct: 163 DLDLGELLHGLVVV---NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN---HRGMVNEGLM---YF 356
+I G+ G AE L+ +M + + + VL AC + G + +G+ Y
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHR-DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+ E+++ R L+D++A+ G ++EA+ L S MP K + V + +++ + D
Sbjct: 279 AKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMISGFLQMD- 332
Query: 417 SVELGEEMAKQVFEI 431
E+ +E + + F++
Sbjct: 333 --EITDEASSEAFKL 345
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 259/514 (50%), Gaps = 76/514 (14%)
Query: 69 SSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDH 128
+S L+ A +PN F++N L + + + +H +++ELY + M+ + V P
Sbjct: 816 TSFKRLDLAVSTMTQMQEPNVFVYNALFKGFV-TCSHPIRSLELY---VRMLRDSVSPSS 871
Query: 129 YTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF-- 186
YT+ ++KA +F+ G+ + A + K G+ +I +LI FY+ G + A K+F
Sbjct: 872 YTYSSLVKAS--SFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDE 929
Query: 187 -----------------------------QNMSEKSE----------------------- 194
MSEK+E
Sbjct: 930 MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 989
Query: 195 --------VSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALS 245
+SW M+ Y + + A+ VF +M++ PD TM +VISACA LG L
Sbjct: 990 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 1049
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
+G H Y ++ DV + + LVDMY KCGSLE A VF +P +++ WNSII
Sbjct: 1050 IGKEVHMYTLQN---GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 1106
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G + HG A+ AL F +M ++E PN++TFV V +AC H G+V+EG + M +Y++
Sbjct: 1107 GLAAHGFAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSI 1165
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMA 425
+EHYG +V LF++AG I EAL L+ M +P+AVIW +LLD C+ ++ + E
Sbjct: 1166 VSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG-CRIHKNLVIAEIAF 1224
Query: 426 KQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKK-PGCSLIEIDGVAH 484
++ +E + SG Y LL +YA +RW +V +R M + G+ K PG S I ID H
Sbjct: 1225 NKLMVLE-PMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDH 1283
Query: 485 EFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPD 518
F A D +H S+++ L+EI +++ GY+ +
Sbjct: 1284 LFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQE 1317
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 8/266 (3%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
+++ Y L +L A LF+ + W T+I+ Y+++ ++ YK MMEE
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK----MMEEG 1027
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
++PD T V+ ACAH L GK+VH L+ G+ D I ++L+ Y+ CG L+ AL
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLG 242
+F N+ +K+ WN +++ G ALK+F +M ++ P+ T SV +AC G
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWN 301
+ G + ++ D ++ ++V +V ++ K G + A ++ M + + W
Sbjct: 1148 LVDEGRRIYRSMID--DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWG 1205
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIE 327
+++ G +H A F +++ +E
Sbjct: 1206 ALLDGCRIHKNLVIAEIAFNKLMVLE 1231
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 254/459 (55%), Gaps = 30/459 (6%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM----LM 119
IL + SL +N HF S N ++ Y S E KA++
Sbjct: 4 ILRHLHSLGVINKFDSFLLHF-HTKSLKSNHTLKQYLESG-------EPIKALLDFRHRF 55
Query: 120 MEEEVVPDHYTFPFVLK-ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+ D ++ F +K + A S +G+Q+HA + KLG+ + +I SL+ FY++ G
Sbjct: 56 RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGD 115
Query: 179 LDMALKIFQNMSEKSE-VSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVIS 236
+D A ++F EK V W M+ +Y A+++F M + + DG + +S
Sbjct: 116 VDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALS 175
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
ACA LGA+ +G ++ +K+ + +A D+ + L++MY K G E A+++F+ +D
Sbjct: 176 ACADLGAVQMGEEIYSRSIKR-KRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKD 234
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEK-----FVPNSITFVGVLSACNHRGMVNE 351
V ++ S+I G++++G+A+ +L+ F +M I++ PN +TF+GVL AC+H G+V E
Sbjct: 235 VTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEE 294
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
G +F M +YN++PR H+GC+VDLF R+G +++A +++MPIKP+ VIWR+LL AC
Sbjct: 295 GKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGAC 354
Query: 412 CKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKK 471
+VELGEE+ +++FE++ G YV LS +YAS W+E +R + + +
Sbjct: 355 SLH-GNVELGEEVQRRIFELDRDHV-GDYVALSNIYASKGMWDEKSKMRDRVRKR---RM 409
Query: 472 PGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL 510
PG S IE+ + +EF +G P + D + EI E L
Sbjct: 410 PGKSWIELGSIINEFVSG----PDNNDEQLMMGEISEVL 444
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 141/301 (46%), Gaps = 21/301 (6%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG-KPNSFMWNTLIR 97
+QIHA + + + + ++ +YSS+ D++YA ++F K N +W +I
Sbjct: 85 RQIHA----LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMIS 140
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
AY + N +AIEL+K M E++ D L ACA ++ G++++++ +K
Sbjct: 141 AYTENENSV-EAIELFKR---MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKR 196
Query: 158 GYE--SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
D + NSL++ Y G + A K+F K ++ M+ Y G+ +L+
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLE 256
Query: 216 VFGEMLKLHD-------PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+F +M + P+ T V+ AC+ G + G ++ D N+
Sbjct: 257 LFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMI--MDYNLKPREAH 314
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
C+VD++C+ G L+ A + +MP + + W +++ S+HG E + R+ +++
Sbjct: 315 FGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELD 374
Query: 328 K 328
+
Sbjct: 375 R 375
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 247/465 (53%), Gaps = 13/465 (2%)
Query: 57 ALFLYSRILHYYSSLA-DLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+L++ + +++ Y++ + + A +F N W TLI + + +++YK
Sbjct: 145 SLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGI-GGLKMYK- 202
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
ML+ EV P Y ++A A S+ GKQ+HA ++K G++S+ + NS++ Y
Sbjct: 203 QMLLENAEVTP--YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCR 260
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVI 235
CG L A F M +K ++WN ++ R+ + L + P+ YT S++
Sbjct: 261 CGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLV 320
Query: 236 SACAGLGALSLGMWAHAYVMKKC-DKNVAADVLVNTCLVDMYCKCGSLEIAQQVF-ERMP 293
+ACA + AL+ G H + ++ +KNV L N L+DMY KCG++ +Q+VF E +
Sbjct: 321 AACANIAALNCGQQLHGRIFRRGFNKNVE---LANA-LIDMYAKCGNIPDSQRVFGEIVD 376
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
R++ SW S+++G+ HG A++ F +MV P+ I F+ VLSAC H G+V +GL
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS-SGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK 413
YF++M EY + P + Y C+VDL RAG+I EA LV MP KPD W ++L AC
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKA 495
Query: 414 QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPG 473
+ + A++V E++ + G YV+LS +YA+ +W + +RK+M G K+ G
Sbjct: 496 HKHNGLISRLAARKVMELKPKMV-GTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAG 554
Query: 474 CSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPD 518
S I ++ F D P + +Y L + E+ GY+P+
Sbjct: 555 MSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPE 599
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 174/335 (51%), Gaps = 14/335 (4%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A LF + W +I YA S+N+ +A E + M+ ++ P+ +T VLK
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYA-SSNYNARAWECFHEMV---KQGTSPNEFTLSSVLK 119
Query: 137 ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG-CLDMALKIFQNMSEKSEV 195
+C + L G VH ++KLG E + N++++ YATC ++ A IF+++ K++V
Sbjct: 120 SCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDV 179
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYV 254
+W ++ + G+ LK++ +M L+ + Y + + A A + +++ G HA V
Sbjct: 180 TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASV 239
Query: 255 MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAE 314
+K + +++ V ++D+YC+CG L A+ F M +D+ +WN++I +E
Sbjct: 240 IK---RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE 296
Query: 315 AALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG-LMYFDMMTKEYNVEPRLEHYG 373
A L F+ + + FVPN TF +++AC + +N G ++ + + +N +E
Sbjct: 297 ALL--MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN--KNVELAN 352
Query: 374 CLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
L+D++A+ G I ++ + E+ + + V W S++
Sbjct: 353 ALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 13/274 (4%)
Query: 165 ICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL- 223
+ +LI Y G ++ A +F M ++ V+W M+ Y + A + F EM+K
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 224 HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG-SL 282
P+ +T+ SV+ +C + L+ G H V+K + + V+ +++MY C ++
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK---LGMEGSLYVDNAMMNMYATCSVTM 163
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM-VKIEKFVPNSITFVGVLS 341
E A +F + ++ +W ++I GF+ G L + +M ++ + P IT + V +
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT-IAVRA 222
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDA 401
+ + + ++ ++ + + + L ++DL+ R G + EA + EM K D
Sbjct: 223 SASIDSVTTGKQIHASVIKRGF--QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DL 279
Query: 402 VIWRSLLDACCKQDASVELGEEMAKQVFEIEGSV 435
+ W +L+ + D+S L + Q FE +G V
Sbjct: 280 ITWNTLISELERSDSSEAL---LMFQRFESQGFV 310
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI 326
++ T L+ Y + G +E A+ +F+ MP RDV +W ++I G++ A + F MVK
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK- 104
Query: 327 EKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQ 386
+ PN T VL +C + ++ G + ++ K +E L +++++A
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK-LGMEGSLYVDNAMMNMYATCSVTM 163
Query: 387 EALNLV-SEMPIKPDAVIWRSLL 408
EA L+ ++ +K D V W +L+
Sbjct: 164 EAACLIFRDIKVKND-VTWTTLI 185
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 228/433 (52%), Gaps = 24/433 (5%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ + +LH Y ++NY R+F + N W +LI + + N AIE ++ M
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN-NRFSDAIEAFREMQ 200
Query: 118 ---LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYES--------DTRIC 166
+ E ++ D +L AC + GK H L LG++ + +
Sbjct: 201 SNGVKANETIMVD------LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-D 225
SLI YA CG L A +F M E++ VSWN ++ Y + G+ + AL +F +ML L
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 226 PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
PD T SVI A G LG HAYV K D + LV+MY K G E A
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT---GFVKDAAIVCALVNMYAKTGDAESA 371
Query: 286 QQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH 345
++ FE + +D +W +I+G + HG AL F RM + P+ IT++GVL AC+H
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR 405
G+V EG YF M + +EP +EHYGC+VD+ +RAGR +EA LV MP+KP+ IW
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 406 SLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSD 465
+LL+ C + ++EL + + V E E + SG YVLLS +YA A RW +V L+R+ M
Sbjct: 492 ALLNGCDIHE-NLELTDRIRSMVAEPE-ELGSGIYVLLSNIYAKAGRWADVKLIRESMKS 549
Query: 466 KGVTKKPGCSLIE 478
K V K G S +E
Sbjct: 550 KRVDKVLGHSSVE 562
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 194/384 (50%), Gaps = 20/384 (5%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLAD---LNYATRLFHHFGKPNSF 90
++ L Q+H +++ N + SR++ + ++ + L+YA +F P+ +
Sbjct: 18 SLVELNQLHGLMIKSSVIRN----VIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVY 73
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
+WN++IR Y+ S N +A+ Y+ M+ + PD++TFP+VLKAC+ + G V
Sbjct: 74 IWNSMIRGYSNSPN-PDKALIFYQEML---RKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H ++K G+E + + L+H Y CG ++ L++F+++ + + V+W ++ +V F
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 211 DTALKVFGEMLKLHDPDGYT-MQSVISACAGLGALSLGMWAHAYVM-----KKCDKNVAA 264
A++ F EM T M ++ AC + G W H ++ V
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
+V++ T L+DMY KCG L A+ +F+ MP R + SWNSII G+S +G AE AL F M+
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
+ P+ +TF+ V+ A +G G ++K V+ LV+++A+ G
Sbjct: 310 DL-GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA-AIVCALVNMYAKTGD 367
Query: 385 IQEALNLVSEMPIKPDAVIWRSLL 408
+ A ++ K D + W ++
Sbjct: 368 AESAKKAFEDLE-KKDTIAWTVVI 390
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 18/287 (6%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG---CLDMALKIFQNMS 190
+L + SL E Q+H ++K + + LI F TC L A +F+++
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMW 249
S WN M+ Y + D AL + EML K + PD +T V+ AC+GL + G
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSM 309
H +V+K ++ V+TCL+ MY CG + +VFE +P +V +W S+I GF
Sbjct: 129 VHGFVVK---TGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 310 HGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRL 369
+ + A++ FR ++ N V +L AC + G +F + +P
Sbjct: 186 NNRFSDAIEA-FREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYF 243
Query: 370 EH--------YGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ L+D++A+ G ++ A L MP + V W S++
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT-LVSWNSII 289
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 251/474 (52%), Gaps = 15/474 (3%)
Query: 39 KQIHAQTL-RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
K +HA+ R I +T+ + S +L YS A +F + + W +LI
Sbjct: 393 KSVHAELFKRPIQSTSTIE-----SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
++ K +A++++ M ++ + PD V ACA +L G QVH ++K
Sbjct: 448 GLCKNGKFK-EALKVFGDMK-DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
G + + +SLI Y+ CG +MALK+F +MS ++ V+WN M+ Y R + ++ +F
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Query: 218 GEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
ML PD ++ SV+ A + +L G H Y ++ + +D + L+DMY
Sbjct: 566 NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL---GIPSDTHLKNALIDMY 622
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCG + A+ +F++M ++ + +WN +I G+ HG AL F M K + P+ +TF
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTF 681
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
+ ++SACNH G V EG F+ M ++Y +EP +EHY +VDL RAG ++EA + + MP
Sbjct: 682 LSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMP 741
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
I+ D+ IW LL A + +VELG A+++ +E S YV L LY A NE
Sbjct: 742 IEADSSIWLCLLSA-SRTHHNVELGILSAEKLLRMEPERGS-TYVQLINLYMEAGLKNEA 799
Query: 457 GLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL 510
L LM +KG+ K+PGCS IE+ + FF+G ++ P +I+ LN + +
Sbjct: 800 AKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 185/386 (47%), Gaps = 19/386 (4%)
Query: 39 KQIHAQTLR-TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHF-GKPNSFMWNTLI 96
KQIH LR ++DT + FL + ++ Y A R+F K N +WN +I
Sbjct: 190 KQIHGFMLRNSLDTDS-----FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
+ S + +++LY ML V +F L AC+ + + G+Q+H ++K
Sbjct: 245 VGFGGSGICE-SSLDLY---MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
+G +D +C SL+ Y+ CG + A +F + +K WN MV +Y +AL +
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 217 FGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
FG M K PD +T+ +VIS C+ LG + G HA + K+ ++ + + + L+ +
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST---IESALLTL 417
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV-KIEKFVPNSI 334
Y KCG A VF+ M +D+ +W S+I G +GK + AL F M + P+S
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 335 TFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSE 394
V +AC + GL M K + + L+DL+++ G + AL + +
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 395 MPIKPDAVIWRSLLDACCKQDASVEL 420
M + + V W S++ +C ++ EL
Sbjct: 537 MSTE-NMVAWNSMI-SCYSRNNLPEL 560
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 148/303 (48%), Gaps = 27/303 (8%)
Query: 129 YTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQN 188
+TFP +LKAC+ +L GK +H ++ LG+ D I SL++ Y CG LD A+++F
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 189 MSE-KSEVS------WNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAG 240
S+ +S VS WN M+D Y + F + F ML PD +++ V+S
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 241 LGALSL--GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DV 297
G G H ++++ ++ D + T L+DMY K G A +VF + + +V
Sbjct: 181 EGNFRREEGKQIHGFMLR---NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL---M 354
WN +I+GF G E++LD + + K S +F G L AC+ N G +
Sbjct: 238 VLWNVMIVGFGGSGICESSLD-LYMLAKNNSVKLVSTSFTGALGACSQSE--NSGFGRQI 294
Query: 355 YFDMMTKEYNVEPRLEHYGC--LVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
+ D++ + +P Y C L+ ++++ G + EA + S + + IW +++ A
Sbjct: 295 HCDVVKMGLHNDP----YVCTSLLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMVAAYA 349
Query: 413 KQD 415
+ D
Sbjct: 350 END 352
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 232/423 (54%), Gaps = 12/423 (2%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
++ ++ Y+ L + A ++F NS +W L++ Y + + E+++ L
Sbjct: 145 YVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDP----EVFRLFCL 200
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY-ESDTRICNSLIHFYATCG 177
M + + D T ++KAC + F+ GK VH ++ + + + S+I Y C
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVIS 236
LD A K+F+ +++ V W ++ + + A +F +ML+ P+ T+ +++
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILV 320
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
+C+ LG+L G H Y+++ + D + T +DMY +CG++++A+ VF+ MP R+
Sbjct: 321 SCSSLGSLRHGKSVHGYMIRN---GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERN 377
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V SW+S+I F ++G E ALD F +M K + VPNS+TFV +LSAC+H G V EG F
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFHKM-KSQNVVPNSVTFVSLLSACSHSGNVKEGWKQF 436
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+ MT++Y V P EHY C+VDL RAG I EA + + MP+KP A W +LL A C+
Sbjct: 437 ESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA-CRIHK 495
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
V+L E+A+++ +E S YVLLS +YA A W V +R+ M KG K G S
Sbjct: 496 EVDLAGEIAEKLLSMEPEK-SSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSA 554
Query: 477 IEI 479
E+
Sbjct: 555 TEV 557
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 178/380 (46%), Gaps = 14/380 (3%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG--KPNSFM 91
T++H +Q+HA+ + + L S + + Y L++AT F+ K N
Sbjct: 19 TLNHTQQVHAKVI----IHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHS 74
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WNT++ Y++S + + L M + V D + F +KAC L G +H
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGV--DSFNLVFAIKACVGLGLLENGILIH 132
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
+K G + D + SL+ YA G ++ A K+F + ++ V W V++ Y++ +
Sbjct: 133 GLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDP 192
Query: 212 TALKVFGEMLKLHDP-DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
++F M D T+ ++ AC + A +G H +++ + +
Sbjct: 193 EVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR--SFIDQSDYLQA 250
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
++DMY KC L+ A+++FE R+V W ++I GF+ +A A D F +M++ E +
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR-ESIL 309
Query: 331 PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
PN T +L +C+ G + G M + +E ++ +D++AR G IQ A
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 391 LVSEMPIKPDAVIWRSLLDA 410
+ MP + + + W S+++A
Sbjct: 369 VFDMMP-ERNVISWSSMINA 387
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 239/456 (52%), Gaps = 12/456 (2%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
++ S ++ Y L A +F + + WN++I+ Y + K +E+ M++
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK-SCVEILNRMII 302
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
E P T +L AC+ + +L GK +H +++ +D + SLI Y CG
Sbjct: 303 ---EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISA 237
++A +F + SWNVM+ SY+ G + A++V+ +M+ + PD T SV+ A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
C+ L AL G H + + + D L+ + L+DMY KCG+ + A ++F +P +DV
Sbjct: 420 CSQLAALEKGKQIHLSI---SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
SW +I + HG+ AL F M K P+ +T + VLSAC H G+++EGL +F
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKF-GLKPDGVTLLAVLSACGHAGLIDEGLKFFS 535
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPD-AVIWRSLLDACCKQDA 416
M +Y +EP +EHY C++D+ RAGR+ EA ++ + P D A + +L ACC
Sbjct: 536 QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH-L 594
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
LG+ +A+ + E S Y++L LYAS W+ +R M + G+ KKPGCS
Sbjct: 595 EHSLGDRIARLLVENYPDDAS-TYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSW 653
Query: 477 IEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLES 512
IE+ FFA D +H ++E++Y+ L + +ES
Sbjct: 654 IEMSDKVCHFFAEDRSHLRAENVYECLALLSGHMES 689
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 216/435 (49%), Gaps = 53/435 (12%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG-KPNSFMW 92
++ +K +H + L T + + L +++ Y + D A +F +F + + ++W
Sbjct: 19 SLRRIKLVHQRIL----TLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIW 74
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N+L+ Y++++ H +E++K L+ VPD +TFP V+KA G+ +H
Sbjct: 75 NSLMSGYSKNSMF-HDTLEVFKR--LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHT 131
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
++K GY D + +SL+ YA + +L++F M E+ SWN ++ + ++GE +
Sbjct: 132 LVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEK 191
Query: 213 ALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKC-DKNVAADVLVNT 270
AL++FG M +P+ ++ ISAC+ L L G H +KC K D VN+
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIH----RKCVKKGFELDEYVNS 247
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
LVDMY KC LE+A++VF++MP + + +WNS+I G+ G +++ ++ RM+ IE
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI-IEGTR 306
Query: 331 PNSITFVGVLSACNH---------------RGMVNEGL--------MYFDMMTKEYNVEP 367
P+ T +L AC+ R +VN + +YF E N+
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK--CGEANLAE 364
Query: 368 RL---------EHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQD 415
+ E + ++ + G +A+ + +M +KPD V + S+L A C Q
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA-CSQL 423
Query: 416 ASVELGEEMAKQVFE 430
A++E G+++ + E
Sbjct: 424 AALEKGKQIHLSISE 438
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 174/350 (49%), Gaps = 11/350 (3%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
S ++ Y+ + ++F + + WNT+I + +S +A+EL+ M
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG-EAEKALELFGRMESSGF 204
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
E P+ + + AC+ L GK++H + +K G+E D + ++L+ Y C CL++
Sbjct: 205 E---PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEV 261
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAG 240
A ++FQ M KS V+WN M+ YV G+ + +++ M ++ P T+ S++ AC+
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
L G + H YV++ V AD+ VN L+D+Y KCG +A+ VF + SW
Sbjct: 322 SRNLLHGKFIHGYVIRSV---VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
N +I + G A++ + +MV + P+ +TF VL AC+ + +G +
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAALEKG-KQIHLSI 436
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
E +E L+D++++ G +EA + + +P K D V W ++ A
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISA 485
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 12/302 (3%)
Query: 134 VLKACAH-TFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
+L+ C + T SL K VH ++L LG D +C SLI+ Y TC A +F+N +
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 193 SEVS-WNVMVDSYVRAGEFDTALKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGMW 249
S+V WN ++ Y + F L+VF +L + PD +T +VI A LG LG
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSM 309
H V+K DV+V + LV MY K E + QVF+ MP RDV SWN++I F
Sbjct: 129 IHTLVVK---SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 310 HGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL-MYFDMMTKEYNVEPR 368
G+AE AL+ F RM + F PNS++ +SAC+ + G ++ + K + ++
Sbjct: 186 SGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 369 LEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQV 428
+ LVD++ + ++ A + +MP + V W S++ + S E + + +
Sbjct: 245 VN--SALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 429 FE 430
E
Sbjct: 302 IE 303
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 252/475 (53%), Gaps = 25/475 (5%)
Query: 39 KQIHAQTLR-TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
KQ+H +++ +D H S ++ YS + A ++F + + N LI
Sbjct: 549 KQVHCLSVKCGLDRDLHTG-----SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
Y S N+ +A+ L++ M+ V P TF +++AC SL G Q H Q+ K
Sbjct: 604 GY--SQNNLEEAVVLFQEML---TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658
Query: 158 GYESDTRICN-SLIHFYATCGCLDMALKIFQNMSE-KSEVSWNVMVDSYVRAGEFDTALK 215
G+ S+ SL+ Y + A +F +S KS V W M+ + + G ++ ALK
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK 718
Query: 216 VFGEMLKLHD---PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
+ EM HD PD T +V+ C+ L +L G H+ + D L + L
Sbjct: 719 FYKEMR--HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD---LDELTSNTL 773
Query: 273 VDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
+DMY KCG ++ + QVF+ M R +V SWNS+I G++ +G AE AL F M + +P
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM-RQSHIMP 832
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ ITF+GVL+AC+H G V++G F+MM +Y +E R++H C+VDL R G +QEA +
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+ +KPDA +W SLL AC + GE A+++ E+E S AYVLLS +YAS
Sbjct: 893 IEAQNLKPDARLWSSLLGACRIHGDDIR-GEISAEKLIELEPQ-NSSAYVLLSNIYASQG 950
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
W + LRK+M D+GV K PG S I+++ H F AGD +H + I FL ++
Sbjct: 951 CWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 222/509 (43%), Gaps = 65/509 (12%)
Query: 47 RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHK 106
R D + P L + +++ Y L L A LF P+ WN +I + +
Sbjct: 251 RMRDEGHRPDHL-AFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET 309
Query: 107 HQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRIC 166
AIE + M + V T VL A +L G VHA+ +KLG S+ +
Sbjct: 310 -VAIEYF---FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG 365
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HD 225
+SL+ Y+ C ++ A K+F+ + EK++V WN M+ Y GE +++F +M ++
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 226 PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
D +T S++S CA L +G H+ ++K K +A ++ V LVDMY KCG+LE A
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIK---KKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 286 QQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH 345
+Q+FERM RD +WN+II + A D F RM + V + L AC H
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM-NLCGIVSDGACLASTLKACTH 541
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP--------- 396
+ +G + K ++ L L+D++++ G I++A + S +P
Sbjct: 542 VHGLYQGKQVHCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 397 ------------------------IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIE 432
+ P + + ++++AC K + S+ LG + Q+ +
Sbjct: 601 LIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE-SLTLGTQFHGQITK-R 658
Query: 433 GSVCSGAYVLLSKL--YASASRWNEV-GLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAG 489
G G Y+ +S L Y ++ E L +L S K + G +G
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG------------MMSG 706
Query: 490 DTTHPKSEDIYKFLNEIDEKLESMGYLPD 518
+ + E+ KF E+ G LPD
Sbjct: 707 HSQNGFYEEALKFYKEMRHD----GVLPD 731
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 178/372 (47%), Gaps = 16/372 (4%)
Query: 41 IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYA 100
+HA+ ++ +N +++ S ++ YS + A ++F + N WN +IR YA
Sbjct: 349 VHAEAIKLGLASN----IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 101 RSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYE 160
+ H+ +EL+ M M D +TF +L CA + L G Q H+ ++K
Sbjct: 405 HNG-ESHKVMELF---MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 161 SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM 220
+ + N+L+ YA CG L+ A +IF+ M ++ V+WN ++ SYV+ A +F M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 221 -LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
L DG + S + AC + L G H + KC + D+ + L+DMY KC
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV-KC--GLDRDLHTGSSLIDMYSKC 577
Query: 280 GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
G ++ A++VF +P V S N++I G+S + EA + F+ + P+ ITF +
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV--LFQEMLTRGVNPSEITFATI 635
Query: 340 LSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYG-CLVDLFARAGRIQEALNLVSEMPIK 398
+ AC+ + G + +TK E+ G L+ ++ + + EA L SE+
Sbjct: 636 VEACHKPESLTLGTQFHGQITKR-GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 399 PDAVIWRSLLDA 410
V+W ++
Sbjct: 695 KSIVLWTGMMSG 706
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 164/372 (44%), Gaps = 53/372 (14%)
Query: 39 KQIHAQTL-RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
K +H+++L ID+ L + I+ Y+ A ++YA + F F + + WN+++
Sbjct: 80 KAVHSKSLILGIDSEGR-----LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
Y+ + ++ ++ + + E ++ P+ +TF VL CA ++ G+Q+H ++K+
Sbjct: 134 MYSSIG----KPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
G E ++ +L+ YA C + A ++F+ + + + V W + YV+AG + A+ VF
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 218 GEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
M + H PD +VI + Y
Sbjct: 250 ERMRDEGHRPDHLAFVTVI--------------------------------------NTY 271
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
+ G L+ A+ +F M DV +WN +I G G A++YFF M K S T
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS-TL 330
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
VLSA ++ GL+ K + + LV ++++ +++ A + +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 397 IKPDAVIWRSLL 408
K D V W +++
Sbjct: 390 EKND-VFWNAMI 400
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
GK VH++ L LG +S+ R+ N+++ YA C + A K F + EK +WN M+ Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 207 AGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
G+ L+ F + + P+ +T V+S CA + G H ++K + +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM---GLERN 194
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
LVDMY KC + A++VFE + + W + G+ G E A+ F RM +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM-R 253
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
E P+ + FV V++ G + + + F M+
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 65/277 (23%)
Query: 203 SYVRAGEF--DTALKVFGEMLKLHDPDGYTMQSVISACAGLG------------------ 242
S+VR + D +++G +L HD Q ++ C G
Sbjct: 18 SFVRRLSYSPDLGRRIYGHVLPSHDQ---IHQRLLEICLGQCKLFKSRKVFDEMPQRLAL 74
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
AL +G H+ K + ++ + +VD+Y KC + A++ F+ + +DV +WNS
Sbjct: 75 ALRIGKAVHS---KSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNS 130
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN-----------HRGMVNE 351
++ +S GK L F + + + F PN TF VLS C H M+
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIF-PNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 352 GL--------MYFDMMTK-----------EYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
GL DM K E+ V+P + CL + +AG +EA+ +
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 393 SEMPI---KPDAVIWRSLLDACCK----QDASVELGE 422
M +PD + + ++++ + +DA + GE
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 223/408 (54%), Gaps = 7/408 (1%)
Query: 112 LYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIH 171
L +A+ L+ + + T+ +L+ C +GK++HAQ+ +G+ + + L+
Sbjct: 92 LKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLI 151
Query: 172 FYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYT 230
YA G L A +F+++ + + WN M+ YV+ G L ++ +M + PD YT
Sbjct: 152 LYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYT 211
Query: 231 MQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFE 290
SV AC+ L L G AHA ++K+C + ++++V++ LVDMY KC S +VF+
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRC---IKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 291 RMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN 350
++ R+V +W S+I G+ HGK L F +M K E PN +TF+ VL+ACNH G+V+
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM-KEEGCRPNPVTFLVVLTACNHGGLVD 327
Query: 351 EGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+G +F M ++Y +EP +HY +VD RAGR+QEA V + P K +W SLL A
Sbjct: 328 KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Query: 411 CCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTK 470
C+ +V+L E A + E++ G YV+ + YAS +R+ M + GV K
Sbjct: 388 -CRIHGNVKLLELAATKFLELD-PTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKK 445
Query: 471 KPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPD 518
PG S IE+ G H F DT+H SE IYK ++E+ + Y PD
Sbjct: 446 DPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 235/420 (55%), Gaps = 10/420 (2%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L + +L Y D++ A R+F+ + MW +I Y + + ++A+ L++ M +
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS-VNEALSLFQKMKGV 337
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
E+ P+ T VL C +L G+ VH +K+G DT + N+L+H YA C
Sbjct: 338 ---EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQN 393
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISAC 238
A +F+ SEK V+WN ++ + + G AL +F M P+G T+ S+ SAC
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
A LG+L++G HAY +K ++ V V T L+D Y KCG + A+ +F+ + ++
Sbjct: 454 ASLGSLAVGSSLHAYSVK-LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI 512
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
+W+++I G+ G +L+ F M+K ++ PN TF +LSAC H GMVNEG YF
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
M K+YN P +HY C+VD+ ARAG +++AL+++ +MPI+PD + + L C +
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG-CGMHSRF 630
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
+LGE + K++ ++ S YVL+S LYAS RWN+ +R LM +G++K G S +E
Sbjct: 631 DLGEIVIKKMLDLHPDDAS-YYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 181/396 (45%), Gaps = 24/396 (6%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K+IH Q ++ N + + +L Y+ ++ A ++F+ N W ++I
Sbjct: 162 KKIHCQLVKVPSFDN-----VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y ++ + + + L+ M E V+ + YT+ ++ AC +L +GK H L+K G
Sbjct: 217 YVKN-DLCEEGLVLFNRMR---ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
E + + SL+ Y CG + A ++F S V W M+ Y G + AL +F
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 219 EMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKC--DKNVAADVLVNTCLVDM 275
+M + P+ T+ SV+S C + L LG H +K D NVA LV M
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA------NALVHM 386
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y KC A+ VFE +D+ +WNSII GFS +G AL F RM E PN +T
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVT 445
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYG-CLVDLFARAGRIQEALNLVSE 394
+ SAC G + G K + H G L+D +A+ G Q A L+ +
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFD 504
Query: 395 MPIKPDAVIWRSLLDACCKQD---ASVELGEEMAKQ 427
+ + + W +++ KQ S+EL EEM K+
Sbjct: 505 TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 170/383 (44%), Gaps = 42/383 (10%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
++++ Y A +F +P+ ++W ++R Y + +++E+ K L+M+
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK----ESVEVVKLYDLLMK 135
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
D F LKAC L GK++H QL+K+ D + L+ YA CG +
Sbjct: 136 HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKS 194
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAG 240
A K+F +++ ++ V W M+ YV+ + L +F M + + + YT ++I AC
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTK 254
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
L AL G W H ++K + + T L+DMY KCG + A++VF + D+ W
Sbjct: 255 LSALHQGKWFHGCLVK---SGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMW 311
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
++I+G++ +G AL F +M +E PN +T VLS C + G +
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRSVHGLSI 370
Query: 361 K----EYNVEPRLEH-------------------------YGCLVDLFARAGRIQEALNL 391
K + NV L H + ++ F++ G I EAL L
Sbjct: 371 KVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFL 430
Query: 392 VSEM---PIKPDAVIWRSLLDAC 411
M + P+ V SL AC
Sbjct: 431 FHRMNSESVTPNGVTVASLFSAC 453
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 216/383 (56%), Gaps = 20/383 (5%)
Query: 90 FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQ 149
F+ NTL+ Y RS ++ +++ V D ++ +L A + E +
Sbjct: 176 FVENTLVNVYGRSG--------YFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 227
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
+ ++ + ES N +I YA G + A ++F +M + VSWN MV +Y G
Sbjct: 228 LFDEMEERNVES----WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283
Query: 210 FDTALKVFGEML--KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVL 267
++ L+VF +ML PDG+T+ SV+SACA LG+LS G W H Y+ K + +
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH---GIEIEGF 340
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
+ T LVDMY KCG ++ A +VF RDV++WNSII S+HG + AL+ F MV E
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV-YE 399
Query: 328 KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQE 387
F PN ITF+GVLSACNH GM+++ F+MM+ Y VEP +EHYGC+VDL R G+I+E
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 388 ALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLY 447
A LV+E+P +++ SLL A CK+ +E E +A ++ E+ SG Y +S LY
Sbjct: 460 AEELVNEIPADEASILLESLLGA-CKRFGQLEQAERIANRLLELNLRDSSG-YAQMSNLY 517
Query: 448 ASASRWNEVGLLRKLMSDKGVTK 470
AS RW +V R+ M + V +
Sbjct: 518 ASDGRWEKVIDGRRNMRAERVNR 540
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 194/410 (47%), Gaps = 65/410 (15%)
Query: 34 TMSHLKQIHAQTLRTI---DTTNHPQALFLYSRILHYYSSLAD---LNYATRLFHHFGKP 87
+++ ++Q HA L+T DT F S+++ + ++ + ++YA + + G P
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDT-------FSASKLVAFAATNPEPKTVSYAHSILNRIGSP 103
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEG 147
N F N++IRAYA S+ A+ +++ M+L V PD Y+F FVLKACA EG
Sbjct: 104 NGFTHNSVIRAYANSST-PEVALTVFREMLL---GPVFPDKYSFTFVLKACAAFCGFEEG 159
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
+Q+H +K G +D + N+L++ Y G ++A K+ M + VSWN ++ +Y+
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 208 GEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVL 267
G D A +F EM ++NV +
Sbjct: 220 GLVDEARALFDEME-------------------------------------ERNVES--- 239
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
++ Y G ++ A++VF+ MP RDV SWN+++ ++ G L+ F +M+
Sbjct: 240 -WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 328 KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQE 387
P+ T V VLSAC G +++G + + ++ +E LVD++++ G+I +
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQG-EWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 388 ALNLVSEMPIKPDAVIWRSLLDACC----KQDASVELGEEMAKQVFEIEG 433
AL V K D W S++ +DA +E+ EM + F+ G
Sbjct: 358 ALE-VFRATSKRDVSTWNSIISDLSVHGLGKDA-LEIFSEMVYEGFKPNG 405
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 234/421 (55%), Gaps = 14/421 (3%)
Query: 60 LYSRILHYYSSLADLNYATRL--FHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L S+++ YS L L + T L F H N F WN +I ++RS ++I+L+ +
Sbjct: 68 LSSKLVLAYSKLNHL-FPTSLSVFWHMPYRNIFSWNIIIGEFSRSG-FASKSIDLF--LR 123
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+ E V PD +T P +L+AC+ + G +H LKLG+ S + ++L+ Y G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVIS 236
L A K+F +M + V + M YV+ GE L +F EM D M S++
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
AC LGAL G H + +++C + + + DMY KC L+ A VF M RD
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCS---CLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V SW+S+ILG+ + G + F M+K E PN++TF+GVLSAC H G+V + +YF
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLK-EGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+M +EYN+ P L+HY + D +RAG ++EA + +MP+KPD + ++L CK
Sbjct: 360 RLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSG-CKVYG 417
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
+VE+GE +A+++ +++ S YV L+ LY++A R++E LR+ M +K ++K PGCS
Sbjct: 418 NVEVGERVARELIQLKPRKAS-YYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSS 476
Query: 477 I 477
I
Sbjct: 477 I 477
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 260/475 (54%), Gaps = 26/475 (5%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+QIH ++ + L + + ++ YS L +FH + N W T+I
Sbjct: 296 RQIHGLCIKR----GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-- 349
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+++K A+ ++ M + V P+ TF ++ A + EG ++H +K G
Sbjct: 350 ----SSNKDDAVSIFLNMRF---DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTG 402
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ S+ + NS I YA L+ A K F++++ + +SWN M+ + + G ALK+F
Sbjct: 403 FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFL 462
Query: 219 EMLKLHDPDGYTMQSVISACAGLGALSL--GMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
P+ YT SV++A A +S+ G HA+++K + + +V++ L+DMY
Sbjct: 463 SAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL---GLNSCPVVSSALLDMY 519
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
K G+++ +++VF M ++ W SII +S HG E ++ F +M+K E P+ +TF
Sbjct: 520 AKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK-ENVAPDLVTF 578
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
+ VL+ACN +GMV++G F+MM + YN+EP EHY C+VD+ RAGR++EA L+SE+P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
P + +S+L + C+ +V++G ++A+ E++ + SG+YV + +YA W++
Sbjct: 639 GGPGESMLQSMLGS-CRLHGNVKMGAKVAELAMEMKPEL-SGSYVQMYNIYAEKEEWDKA 696
Query: 457 GLLRKLMSDKGVTKKPGCSLIEIDGVA-----HEFFAGDTTHPKSEDIYKFLNEI 506
+RK M K V+K+ G S I++ F +GD +HPKS++IY+ + I
Sbjct: 697 AEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEII 751
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 170/371 (45%), Gaps = 20/371 (5%)
Query: 44 QTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSA 103
Q T+ T L + + + YS A R+F + WN+L+ ++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 104 NHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDT 163
+A+ +++ MM E V DH +F V+ C H L +Q+H +K GYES
Sbjct: 255 TFGFEAVVIFRDMM---REGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 164 RICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LK 222
+ N L+ Y+ CG L+ +F MSE++ VSW M+ S D A+ +F M
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFD 366
Query: 223 LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
P+ T +I+A + G+ H +K ++ V + +Y K +L
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK---TGFVSEPSVGNSFITLYAKFEAL 423
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
E A++ FE + +R++ SWN++I GF+ +G + AL F + +PN TF VL+A
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAA--ETMPNEYTFGSVLNA 481
Query: 343 CNHRG--MVNEGLM-YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKP 399
V +G + ++ N P + L+D++A+ G I E+ + +EM K
Sbjct: 482 IAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMSQK- 538
Query: 400 DAVIWRSLLDA 410
+ +W S++ A
Sbjct: 539 NQFVWTSIISA 549
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 163/359 (45%), Gaps = 22/359 (6%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ Y + A +F + P+ WNT++ + + A+ ++ M
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF----DDNQIALNF---VVRMKSAG 169
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
VV D +T+ L C + G Q+ + ++K G ESD + NS I Y+ G A
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFD-TALKVFGEMLKLH-DPDGYTMQSVISACAGL 241
++F MS K +SWN ++ + G F A+ +F +M++ + D + SVI+ C
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
L L H +K+ +++ + V L+ Y KCG LE + VF +M R+V SW
Sbjct: 290 TDLKLARQIHGLCIKRGYESL---LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK 361
++I + A+ F M + + PN +TFVG+++A + EGL + K
Sbjct: 347 TMI-----SSNKDDAVSIFLNM-RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 362 E-YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ EP + + + L+A+ +++A ++ + + + W +++ + S E
Sbjct: 401 TGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFR-EIISWNAMISGFAQNGFSHE 456
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 16/293 (5%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
D T LKAC L G Q+H G+ S + N+++ Y G D AL IF
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 187 QNMSEKSEVSWNVMV---DSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGA 243
+N+ + VSWN ++ D A F +K G + D +T + +S C G
Sbjct: 135 ENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVF-----DAFTYSTALSFCVGSEG 189
Query: 244 LSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSI 303
LG+ + V+K + +D++V + MY + GS A++VF+ M ++D+ SWNS+
Sbjct: 190 FLLGLQLQSTVVK---TGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSL 246
Query: 304 ILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEY 363
+ G S G FR + E + ++F V++ C H + + K
Sbjct: 247 LSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR- 305
Query: 364 NVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
E LE L+ +++ G + EA+ V + + V W +++ + K DA
Sbjct: 306 GYESLLEVGNILMSRYSKCG-VLEAVKSVFHQMSERNVVSWTTMISS-NKDDA 356
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 244/464 (52%), Gaps = 48/464 (10%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
LFL + ++ Y L + ++F K +S +N++I Y + A EL+ M
Sbjct: 156 LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK-CGLIVSARELFDLMP 214
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+ M+ + ++ ++ A T +G + ++L E D NS+I Y G
Sbjct: 215 MEMKNLI-----SWNSMISGYAQT---SDGVDIASKLFADMPEKDLISWNSMIDGYVKHG 266
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAG-------EFDT------------------ 212
++ A +F M + V+W M+D Y + G FD
Sbjct: 267 RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Query: 213 ------ALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
AL++F +M K PD T+ V+ A A LG LS + H Y++ +K
Sbjct: 327 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV---EKQFYL 383
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
+ L+DMY KCGS++ A VFE + + ++ WN++I G ++HG E+A D ++
Sbjct: 384 GGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 443
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
++ P+ ITFVGVL+AC+H G+V EGL+ F++M +++ +EPRL+HYGC+VD+ +R+G
Sbjct: 444 RLS-LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGS 502
Query: 385 IQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLS 444
I+ A NL+ EMP++P+ VIWR+ L AC E GE +AK + ++ +YVLLS
Sbjct: 503 IELAKNLIEEMPVEPNDVIWRTFLTACSHH-KEFETGELVAKHLI-LQAGYNPSSYVLLS 560
Query: 445 KLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFA 488
+YAS W +V +R +M ++ + K PGCS IE+DG HEFF
Sbjct: 561 NMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 191/397 (48%), Gaps = 56/397 (14%)
Query: 34 TMSHLKQIHAQTLRT--IDTTNHPQALFLYSRILHYYSS-----LADLNYATRLFHH--- 83
T + QIH + ++T I +N L +RI+ ++S LAD +A +FH
Sbjct: 24 TSDDVNQIHGRLIKTGIIKNSN------LTTRIVLAFASSRRPYLAD--FARCVFHEYHV 75
Query: 84 ----FGK-PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKAC 138
FG+ + F+WN +I++++ H + + LM+E V D ++ VLKAC
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHS----HGKDPRQALLLLCLMLENGVSVDKFSLSLVLKAC 131
Query: 139 AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWN 198
+ + G Q+H L K G SD + N LI Y CGCL ++ ++F M ++ VS+N
Sbjct: 132 SRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYN 191
Query: 199 VMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLG---------------- 242
M+D YV+ G +A ++F +++ + + + S+IS A
Sbjct: 192 SMIDGYVKCGLIVSARELF-DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 243 -ALSLGMWAHAYVMKKCDKNVAA--------DVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
+S YV ++ DV+ ++D Y K G + A+ +F++MP
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
+RDV ++NS++ G+ + AL+ F M K +P+ T V VL A G +++ +
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 354 -MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
M+ ++ K++ + +L L+D++++ G IQ A+
Sbjct: 371 DMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAM 405
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 239/469 (50%), Gaps = 41/469 (8%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFH-----HFGKPN 88
T+ KQIHAQ + H +LF +++ +Y S +++L H FG P+
Sbjct: 20 TLIQAKQIHAQL---VINGCHDNSLF--GKLIGHYCSKPSTESSSKLAHLLVFPRFGHPD 74
Query: 89 SFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVL---KACAHTFSLC 145
F++NTL++ + + A K+ +L + E TF FVL A + +L
Sbjct: 75 KFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNER------TFVFVLGACARSASSSALR 128
Query: 146 EGKQVHAQLLKLG--YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDS 203
G+ VH + KLG YES+ I +L+HFYA G L A K+F M E++ V+WN M+
Sbjct: 129 VGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 204 YV--------RAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVM 255
Y A + + F P TM V+SA + G L +G H Y+
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI- 246
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEA 315
+K DV + T LVDMY KCG L A VFE M ++V +W S+ G +++G+
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 316 ALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCL 375
+ RM + PN ITF +LSA H G+V EG+ F M + V P +EHYGC+
Sbjct: 307 TPNLLNRMAE-SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 376 VDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIE--- 432
VDL +AGRIQEA + MPIKPDA++ RSL +AC +V +GEE+ K + EIE
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETV-MGEEIGKALLEIERED 424
Query: 433 ----GSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
GS C YV LS + A +W EV LRK M ++ + +PG S +
Sbjct: 425 EKLSGSECED-YVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 251/479 (52%), Gaps = 19/479 (3%)
Query: 38 LKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM-WNTLI 96
LKQ+HA+ L+ + + + ++ Y+ ++ A R+F G + WN++I
Sbjct: 222 LKQVHAKVLKL----GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
+++ K A EL+ + M V D YT+ +L AC+ GK +H ++K
Sbjct: 278 AGFSKH-ELKESAFELF---IQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 157 LGYESDTRICNSLIHFYAT--CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
G E T N+LI Y G ++ AL +F+++ K +SWN ++ + + G + A+
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAV 393
Query: 215 KVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
K F + D Y +++ +C+ L L LG HA K ++ V + L+
Sbjct: 394 KFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS---GFVSNEFVISSLI 450
Query: 274 DMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
MY KCG +E A++ F+++ + +WN++ILG++ HG + +LD F +M + +
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN-QNVKLD 509
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+TF +L+AC+H G++ EGL ++M Y ++PR+EHY VDL RAG + +A L+
Sbjct: 510 HVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELI 569
Query: 393 SEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASR 452
MP+ PD ++ ++ L C+ +E+ ++A + EIE YV LS +Y+ +
Sbjct: 570 ESMPLNPDPMVLKTFL-GVCRACGEIEMATQVANHLLEIEPED-HFTYVSLSHMYSDLKK 627
Query: 453 WNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
W E ++K+M ++GV K PG S IEI F A D ++P +DIY + ++ ++++
Sbjct: 628 WEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 17/366 (4%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ +RIL Y L YA LF K +S WNT+I Y S A L+ M
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYT-SCGKLEDAWCLFTCMK 93
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+ D Y+F +LK A G+QVH ++K GYE + + +SL+ YA C
Sbjct: 94 RSGSD---VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG--EMLKLHDPDGYTMQSVI 235
++ A + F+ +SE + VSWN ++ +V+ + TA + G EM D T ++
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM-PY 294
+ +L HA V+K + ++ + ++ Y CGS+ A++VF+ +
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLK---LGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGS 267
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSI-TFVGVLSACNHRGMVNEGL 353
+D+ SWNS+I GFS H E+A + F +M + +V I T+ G+LSAC+ G
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQR--HWVETDIYTYTGLLSACSGEEHQIFGK 325
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFAR--AGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
M+ K+ +E L+ ++ + G +++AL+L + K D + W S++
Sbjct: 326 SLHGMVIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK-DLISWNSIITGF 383
Query: 412 CKQDAS 417
++ S
Sbjct: 384 AQKGLS 389
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 27/306 (8%)
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGE 209
H +K G SD + N ++ Y G L A +F M ++ VSWN M+ Y G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 210 FDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+ A +F M + D DGY+ ++ A + LG H V+K +V V
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK---GGYECNVYV 138
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+ LVDMY KC +E A + F+ + + SWN++I GF + A M
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 329 FVPNSITFVGVLSA------CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARA 382
++ TF +L+ CN V+ ++ + ++ + ++ +A
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL-------KLGLQHEITICNAMISSYADC 251
Query: 383 GRIQEALNLVSEMPIKPDAVIWRSLLDACCK---QDASVELGEEMAKQVFEIEG------ 433
G + +A + + D + W S++ K ++++ EL +M + E +
Sbjct: 252 GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGL 311
Query: 434 -SVCSG 438
S CSG
Sbjct: 312 LSACSG 317
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 155/491 (31%), Positives = 248/491 (50%), Gaps = 56/491 (11%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLAD--------LNYATRLFHHFG 85
T+ HL Q HAQ + + +N + +++ +L +S++ ++YAT +F
Sbjct: 16 TLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFIT 75
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACA--HTFS 143
P++F +NT+IR H+ ++ + + M V PD +TFPFV KACA
Sbjct: 76 NPSTFCFNTIIRI---CTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGD 132
Query: 144 LCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDS 203
L K +H Q L+ G SD N+LI Y+ +D AL++F ++ V++NV++D
Sbjct: 133 LTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDG 192
Query: 204 YVRAGE-------FDT------------------------ALKVFGEMLKLH-DPDGYTM 231
V+A E FD+ A+K+F EM+ L PD +
Sbjct: 193 LVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAI 252
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
S +SACA G G H Y + K + D + T LVD Y KCG ++ A ++FE
Sbjct: 253 VSTLSACAQSGDWQKGKAIHDYTKR---KRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
+ + +WN++I G +MHG E +DYF +MV P+ +TF+ VL C+H G+V+E
Sbjct: 310 CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVS-SGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI----KPDAVIWRSL 407
FD M Y+V ++HYGC+ DL RAG I+EA ++ +MP + + W L
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGL 428
Query: 408 LDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMS-DK 466
L C+ ++E+ E+ A +V + G Y ++ ++YA+A RW EV +R+++ DK
Sbjct: 429 LGG-CRIHGNIEIAEKAANRVKALSPED-GGVYKVMVEMYANAERWEEVVKVREIIDRDK 486
Query: 467 GVTKKPGCSLI 477
V K G S +
Sbjct: 487 KVKKNVGFSKV 497
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 244/487 (50%), Gaps = 14/487 (2%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHF-GKPNSFM 91
+ +S +K++H + ++ S ++ YS + A ++F + +S +
Sbjct: 174 MELSDVKKVHGLAFKL----GFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVL 229
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN L+ Y++ + + K M EE V +T VL A + + G+ +H
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSK----MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
+K G SD + N+LI Y L+ A IF+ M E+ +WN ++ + G+ D
Sbjct: 286 GLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHD 345
Query: 212 TALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAY-VMKKCDKNVAADVLVN 269
L +F ML PD T+ +V+ C L +L G H Y ++ +++ ++
Sbjct: 346 GTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH 405
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
L+DMY KCG L A+ VF+ M +D SWN +I G+ + E ALD F M +
Sbjct: 406 NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCR-AGV 464
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
P+ ITFVG+L AC+H G +NEG + M YN+ P +HY C++D+ RA +++EA
Sbjct: 465 KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAY 524
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
L PI + V+WRS+L + C+ + +L K++ E+E C G YVL+S +Y
Sbjct: 525 ELAISKPICDNPVVWRSILSS-CRLHGNKDLALVAGKRLHELEPEHC-GGYVLMSNVYVE 582
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEK 509
A ++ EV +R M + V K PGCS I + H FF G+ THP+ + I+ +L+ +
Sbjct: 583 AGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISH 642
Query: 510 LESMGYL 516
+ Y+
Sbjct: 643 MHGHEYM 649
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 183/377 (48%), Gaps = 19/377 (5%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+QIH +R + P+A + +++ Y+ + A +F + + F +N LI
Sbjct: 80 QQIHGFMVRKGFLDDSPRA---GTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISG 135
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+ + + A+E Y+ M ++PD YTFP +LK + L + K+VH KLG
Sbjct: 136 FVVNGS-PLDAMETYREMR---ANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLG 190
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE-VSWNVMVDSYVRAGEFDTALKVF 217
++SD + + L+ Y+ ++ A K+F + ++ + V WN +V+ Y + F+ AL VF
Sbjct: 191 FDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVF 250
Query: 218 GEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+M + +T+ SV+SA G + G H +K +D++V+ L+DMY
Sbjct: 251 SKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK---TGSGSDIVVSNALIDMY 307
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
K LE A +FE M RD+ +WNS++ G + L F RM+ P+ +T
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML-CSGIRPDIVTL 366
Query: 337 VGVLSACNHRGMVNEG--LMYFDMMTKEYNVEPRLEH-YGCLVDLFARAGRIQEALNLVS 393
VL C + +G + + +++ N + E + L+D++ + G +++A +
Sbjct: 367 TTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFD 426
Query: 394 EMPIKPDAVIWRSLLDA 410
M +K D+ W +++
Sbjct: 427 SMRVK-DSASWNIMING 442
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 14/297 (4%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDT-RICNSLIHFYATCGCLDMALKIFQNMSEK 192
L+ CA G+Q+H +++ G+ D+ R SL++ YA CG + A+ +F SE+
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAH 251
+N ++ +V G A++ + EM PD YT S++ + LS H
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVH 183
Query: 252 AYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS-WNSIILGFSMH 310
K +D V + LV Y K S+E AQ+VF+ +P RD + WN+++ G+S
Sbjct: 184 GLAFK---LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLE 370
+ E AL F +M + E + T VLSA G ++ G + K +
Sbjct: 241 FRFEDALLVFSKM-REEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKT-GSGSDIV 298
Query: 371 HYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL---DACCKQDASVELGEEM 424
L+D++ ++ ++EA N + E + D W S+L D C D ++ L E M
Sbjct: 299 VSNALIDMYGKSKWLEEA-NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 230 TMQSVISACAGLGALSLGMWAHAYVMKK--CDKNVAADVLVNTCLVDMYCKCGSLEIAQQ 287
T + + CA G H ++++K D + A T LV+MY KCG + A
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRA----GTSLVNMYAKCGLMRRAVL 117
Query: 288 VFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
VF RDV +N++I GF ++G A++ +R ++ +P+ TF +L +
Sbjct: 118 VFGG-SERDVFGYNALISGFVVNGSPLDAMET-YREMRANGILPDKYTFPSLLKGSD--- 172
Query: 348 MVNEGLMYFDMMTKEYNVEPRLE-----HYGC-LVDLFARAGRIQEALNLVSEMPIKPDA 401
M + K + + +L + G LV +++ +++A + E+P + D+
Sbjct: 173 -----AMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDS 227
Query: 402 VIWRSLLDA 410
V+W +L++
Sbjct: 228 VLWNALVNG 236
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 236/440 (53%), Gaps = 15/440 (3%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
KQ+H TL++ + L + S + YS L + +LF ++ W ++I
Sbjct: 470 KQVHGYTLKSGLVLD----LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+ + +AI L+ M+ ++ PD T VL C+ SL GK++H L+ G
Sbjct: 526 F-NEYGYLREAIGLFSEML---DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG 581
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ + ++L++ Y+ CG L +A +++ + E VS + ++ Y + G +F
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 219 EM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
+M + D + + S++ A A SLG HAY+ K + + V + L+ MY
Sbjct: 642 DMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKI---GLCTEPSVGSSLLTMYS 698
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
K GS++ + F ++ D+ +W ++I ++ HGKA AL + ++K + F P+ +TFV
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQ-VYNLMKEKGFKPDKVTFV 757
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
GVLSAC+H G+V E + + M K+Y +EP HY C+VD R+GR++EA + ++ M I
Sbjct: 758 GVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHI 817
Query: 398 KPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVG 457
KPDA++W +LL A CK VELG+ AK+ E+E S +GAY+ LS + A W+EV
Sbjct: 818 KPDALVWGTLL-AACKIHGEVELGKVAAKKAIELEPSD-AGAYISLSNILAEVGEWDEVE 875
Query: 458 LLRKLMSDKGVTKKPGCSLI 477
RKLM GV K+PG S +
Sbjct: 876 ETRKLMKGTGVQKEPGWSSV 895
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 178/357 (49%), Gaps = 15/357 (4%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+ +F+ + I+ Y+ + A +F P+ W ++ Y +S N A+E++K
Sbjct: 283 EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS-NDAFSALEIFKE 341
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M V ++ T V+ AC +CE QVHA + K G+ D+ + +LI Y+
Sbjct: 342 MR---HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSK 398
Query: 176 CGCLDMALKIFQNMSE-KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQS 233
G +D++ ++F+++ + + + NVM+ S+ ++ + A+++F ML+ D +++ S
Sbjct: 399 SGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCS 458
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
++S L L+LG H Y +K + D+ V + L +Y KCGSLE + ++F+ +P
Sbjct: 459 LLSV---LDCLNLGKQVHGYTLK---SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIP 512
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
++D W S+I GF+ +G A+ F M+ + P+ T VL+ C+ + G
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLD-DGTSPDESTLAAVLTVCSSHPSLPRG- 570
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
T ++ ++ LV+++++ G ++ A + +P + D V SL+
Sbjct: 571 KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISG 626
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 54/409 (13%)
Query: 40 QIHAQTLRT---IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGK-PNSFMWNTL 95
Q+HA ++ +D++ + + ++ YS D++ + ++F + N +
Sbjct: 372 QVHAWVFKSGFYLDSS-------VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVM 424
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
I ++++S +AI L+ M+ +E + D ++ +L L GKQVH L
Sbjct: 425 ITSFSQS-KKPGKAIRLFTRML---QEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTL 477
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
K G D + +SL Y+ CG L+ + K+FQ + K W M+ + G A+
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG 537
Query: 216 VFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
+F EML PD T+ +V++ C+ +L G H Y ++ + + + + LV+
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLR---AGIDKGMDLGSALVN 594
Query: 275 MYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV----KIEKFV 330
MY KCGSL++A+QV++R+P D S +S+I G+S HG + F MV ++ F
Sbjct: 595 MYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 331 PNSITFVGVLSA-----------CNHRGMVNE---GLMYFDMMTKEYNVE---------- 366
+SI LS G+ E G M +K +++
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN 714
Query: 367 -PRLEHYGCLVDLFARAGRIQEAL---NLVSEMPIKPDAVIWRSLLDAC 411
P L + L+ +A+ G+ EAL NL+ E KPD V + +L AC
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 14/301 (4%)
Query: 55 PQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHK--HQAIEL 112
P +FL +L +YS+ + A +LF +P+ N +I Y + H+ +++
Sbjct: 81 PFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ---HRLFEESLRF 137
Query: 113 YKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHF 172
+ M + E + ++ V+ AC+ + + V +K+GY + ++LI
Sbjct: 138 FSKMHFLGFE---ANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDV 194
Query: 173 YATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTM 231
++ + A K+F++ + WN ++ +R + +F EM + PD YT
Sbjct: 195 FSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTY 254
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
SV++ACA L L G A V+K C A DV V T +VD+Y KCG + A +VF R
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIK-CG---AEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
+P V SW ++ G++ A +AL+ F M + N+ T V+SAC MV E
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 352 G 352
Sbjct: 370 A 370
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 235/448 (52%), Gaps = 47/448 (10%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
S ++ Y++ +N + LF +WN++I Y + N K +A+ L+ M
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI-ANNMKMEALVLFNEM----R 311
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY---------------------- 159
E D T V+ AC L GKQ+H K G
Sbjct: 312 NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPME 371
Query: 160 --------ES-DTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
ES DT + NS+I Y +CG +D A ++F+ + KS +SWN M + + + G
Sbjct: 372 ACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCT 431
Query: 211 DTALKVFGEMLKLHDP-DGYTMQSVISACAGLGALSLG--MWAHAYVMKKCDKNVAADVL 267
L+ F +M KL P D ++ SVISACA + +L LG ++A A ++ + +D +
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV-----GLDSDQV 486
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
V++ L+D+YCKCG +E ++VF+ M D WNS+I G++ +G+ A+D F +M +
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM-SVA 545
Query: 328 KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQE 387
P ITF+ VL+ACN+ G+V EG F+ M ++ P EH+ C+VDL ARAG ++E
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 388 ALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLY 447
A+NLV EMP D +W S+L C +G++ A+++ E+E S AYV LS ++
Sbjct: 606 AINLVEEMPFDVDGSMWSSILRGCVANGYKA-MGKKAAEKIIELEPEN-SVAYVQLSAIF 663
Query: 448 ASASRWNEVGLLRKLMSDKGVTKKPGCS 475
A++ W L+RKLM + VTK PG S
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 181/414 (43%), Gaps = 75/414 (18%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
+ ++ ++ ++ +L+ A RLF+ + + N+L+ Y + + +A+ L+K
Sbjct: 125 YSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG-YAEEALRLFK---- 179
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
E D T VLKACA +L GKQ+HAQ+L G E D+++ +SL++ YA CG
Sbjct: 180 --ELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 179 LDMA-------------------------------LKIFQNMSEKSEVSWNVMVDSYVRA 207
L MA +F S + + WN M+ Y+
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 208 GEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVL 267
AL +F EM D T+ +VI+AC GLG L G H + C + D++
Sbjct: 298 NMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHA---CKFGLIDDIV 354
Query: 268 VNTCLVDMYCKCGS-------------------------------LEIAQQVFERMPYRD 296
V + L+DMY KCGS ++ A++VFER+ +
Sbjct: 355 VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS 414
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ SWNS+ GFS +G L+YF +M K++ + ++ V+SAC + G F
Sbjct: 415 LISWNSMTNGFSQNGCTVETLEYFHQMHKLD-LPTDEVSLSSVISACASISSLELGEQVF 473
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
T ++ L+DL+ + G ++ + M +K D V W S++
Sbjct: 474 ARATI-VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISG 525
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 10/281 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
L + ++ Y S ++ A R+F + WN++ ++++ +E +
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG----CTVETLEYFHQ 440
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M + ++ D + V+ ACA SL G+QV A+ +G +SD + +SLI Y CG
Sbjct: 441 MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGF 500
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISA 237
++ ++F M + EV WN M+ Y G+ A+ +F +M + P T V++A
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-D 296
C G + G + K D D +C+VD+ + G +E A + E MP+ D
Sbjct: 561 CNYCGLVEEG--RKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVD 618
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
+ W+SI+ G +G +++++E NS+ +V
Sbjct: 619 GSMWSSILRGCVANGYKAMGKKAAEKIIELEP--ENSVAYV 657
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 46/211 (21%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRI-CNSLIHFYATCGCLDMALKIFQNMSEK 192
+L++C+ +Q + LLK G+ S I N L+ Y+ G + +A +F M ++
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHA 252
+ SWN M++ Y+ +GE T+L+ F M + DGY+ V+S
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMM---PERDGYSWNVVVSG--------------- 133
Query: 253 YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGK 312
+ K G L +A+++F MP +DV + NS++ G+ ++G
Sbjct: 134 -----------------------FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGY 170
Query: 313 AEAALDYFFRMVKIEKFVPNSITFVGVLSAC 343
AE AL R+ K F ++IT VL AC
Sbjct: 171 AEEAL----RLFKELNFSADAITLTTVLKAC 197
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 229/453 (50%), Gaps = 50/453 (11%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+ + L++ +++ Y DL A R F + + +WNT+I Y N
Sbjct: 57 KNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGN----------- 105
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M+E + D C S N+++ YA
Sbjct: 106 ---MLEARSLFDQM-------PCRDVMSW----------------------NTVLEGYAN 133
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQS 233
G ++ ++F +M E++ SWN ++ Y + G L F M+ P+ TM
Sbjct: 134 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
V+SACA LGA G W H Y V DV V L+DMY KCG++EIA +VF+ +
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKV--DVNVKNALIDMYGKCGAIEIAMEVFKGIK 251
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
RD+ SWN++I G + HG AL+ F M K P+ +TFVGVL AC H G+V +GL
Sbjct: 252 RRDLISWNTMINGLAAHGHGTEALNLFHEM-KNSGISPDKVTFVGVLCACKHMGLVEDGL 310
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK 413
YF+ M ++++ P +EH GC+VDL +RAG + +A+ +++MP+K DAVIW +LL A K
Sbjct: 311 AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA-SK 369
Query: 414 QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPG 473
V++GE +++ ++E +V+LS +Y A R+++ L+ M D G K+ G
Sbjct: 370 VYKKVDIGEVALEELIKLEPR-NPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAG 428
Query: 474 CSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
S IE D +F++ HP++E++ + L E+
Sbjct: 429 VSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 163 TRICNSLIHFYATC--GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM 220
T N + F C G + A K+F M EK+ V W M++ Y+ + +A + F
Sbjct: 26 TESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLS 85
Query: 221 LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG 280
+ D ++IS G + +G A + D+ DV+ +++ Y G
Sbjct: 86 ---PERDIVLWNTMIS-----GYIEMGNMLEARSL--FDQMPCRDVMSWNTVLEGYANIG 135
Query: 281 SLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVL 340
+E ++VF+ MP R+V SWN +I G++ +G+ L F RMV VPN T VL
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 341 SACNHRGMVN---------EGLMY-----------FDMMTKEYNVEPRLE---------- 370
SAC G + E L Y DM K +E +E
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDL 255
Query: 371 -HYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDAC 411
+ +++ A G EALNL EM I PD V + +L AC
Sbjct: 256 ISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 249/466 (53%), Gaps = 17/466 (3%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ + ++ YS D++ A R+F N WN+++ + + + +A+E++
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYD-EALEMFH--- 317
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
LM++E V D T +L+ C K +H +++ GYES+ +SLI Y +C
Sbjct: 318 LMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCS 377
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISA 237
+D A + +M+ K VS + M+ AG D A+ +F M P+ T+ S+++A
Sbjct: 378 LVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT--PNAITVISLLNA 435
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
C+ L WAH +++ D+ V T +VD Y KCG++E+A++ F+++ +++
Sbjct: 436 CSVSADLRTSKWAHGIAIRR--SLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNI 493
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
SW II ++++G + AL F M K + + PN++T++ LSACNH G+V +GLM F
Sbjct: 494 ISWTVIISAYAINGLPDKALALFDEM-KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFK 552
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP--IKPDAVIWRSLLDACCKQD 415
M +E + +P L+HY C+VD+ +RAG I A+ L+ +P +K A W ++L C +
Sbjct: 553 SMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRF 611
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
+ + E+ +V E+E +CS Y+L S +A+ W +V ++R+L+ ++ V G S
Sbjct: 612 KKLIITSEVVAEVLELE-PLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYS 670
Query: 476 LIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSG 521
++ +A F AGD + LN++ + L L D +G
Sbjct: 671 MVREGNLAKRFLAGDKLSQSDSE----LNDVVQSLHRCMKLDDTAG 712
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 42/386 (10%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
LF + I +Y DL R F +S WN ++ + K +
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
E P+ T V+ AC + +G+++H +++ G+ + + NS++ YA
Sbjct: 121 WGFE----PNTSTLVLVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYADSD 174
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML--KLHDPDGYTMQSVI 235
L A K+F MSE+ +SW+V++ SYV++ E LK+F EM+ +PD T+ SV+
Sbjct: 175 SLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
AC + + +G H + +++ ADV V L+DMY K ++ A +VF+ R
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFD--LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR 291
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN----------- 344
++ SWNSI+ GF + + + AL+ F MV+ E + +T V +L C
Sbjct: 292 NIVSWNSILAGFVHNQRYDEALEMFHLMVQ-EAVEVDEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 345 HRGMVNEGL----MYFDMMTKEYNVEPRLEHYGCLVDL---------------FARAGRI 385
H ++ G + + Y ++ G ++D A AGR
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDAC 411
EA+++ M P+A+ SLL+AC
Sbjct: 411 DEAISIFCHMRDTPNAITVISLLNAC 436
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 132/310 (42%), Gaps = 30/310 (9%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
D + FP V KACA L +G NS+ FY CG L L+ F
Sbjct: 44 DPFVFPIVFKACAKLSWLFQG-------------------NSIADFYMKCGDLCSGLREF 84
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALS 245
M+ + VSWNV+V + G + L F ++ + +P+ T+ VI AC L
Sbjct: 85 DCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WF 142
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
G H YV++ +++ V ++ MY SL A+++F+ M RDV SW+ +I
Sbjct: 143 DGEKIHGYVIRSGFCGISS---VQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIR 198
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
+ + L F MV K P+ +T VL AC ++ G +
Sbjct: 199 SYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFD 258
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC---KQDASVELGE 422
+ L+D++++ + A + E + + V W S+L + D ++E+
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNSILAGFVHNQRYDEALEMFH 317
Query: 423 EMAKQVFEIE 432
M ++ E++
Sbjct: 318 LMVQEAVEVD 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 21/274 (7%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K IH +R +N S ++ Y+S + ++ A + + +T+I
Sbjct: 348 KSIHGVIIRRGYESNE----VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISG 403
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
A A +AI ++ M P+ T +L AC+ + L K H ++
Sbjct: 404 LAH-AGRSDEAISIFCHM------RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRS 456
Query: 159 YE-SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
+D + S++ YA CG ++MA + F ++EK+ +SW V++ +Y G D AL +F
Sbjct: 457 LAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALF 516
Query: 218 GEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
EM K + P+ T + +SAC G + G+ ++++ K + +C+VDM
Sbjct: 517 DEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK---PSLQHYSCIVDML 573
Query: 277 CKCGSLEIAQQVFERMPYRDV----NSWNSIILG 306
+ G ++ A ++ + +P DV ++W +I+ G
Sbjct: 574 SRAGEIDTAVELIKNLP-EDVKAGASAWGAILSG 606
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 241/481 (50%), Gaps = 47/481 (9%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMM 120
+ +L Y + A +F K +F WN +I +A + + L+K M+
Sbjct: 141 WCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE-SCLSLFKEML--- 196
Query: 121 EEEVVPDHYTFPFVLKAC-AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
E E PD YTF ++ AC A + ++ G+ VHA +LK G+ S NS++ FY G
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 180 D-------------------------------MALKIFQNMSEKSEVSWNVMVDSYVRAG 208
D AL++F EK+ V+W M+ Y R G
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 209 EFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVL 267
+ + AL+ F EM+K D D + +V+ AC+GL L G H ++ + A
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA---Y 373
Query: 268 VNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE 327
V LV++Y KCG ++ A + F + +D+ SWN+++ F +HG A+ AL + M+
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA-S 432
Query: 328 KFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQE 387
P+++TF+G+L+ C+H G+V EG M F+ M K+Y + ++H C++D+F R G + E
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 388 ALNLV----SEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLL 443
A +L S + + W +LL AC ELG E++K V +I ++VLL
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTH-WHTELGREVSK-VLKIAEPSEEMSFVLL 550
Query: 444 SKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFL 503
S LY S RW E +R+ M ++G+ K PGCS IE+ F GD++HP+ E++ + L
Sbjct: 551 SNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETL 610
Query: 504 N 504
N
Sbjct: 611 N 611
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 181/418 (43%), Gaps = 81/418 (19%)
Query: 63 RILHYYSSLAD---LNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
R+ +SLA + A ++F + ++ WNT++ +Y+R H+ +AI L+ +
Sbjct: 6 RLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQ-EAIALFTQLRF- 63
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG-- 177
+ PD Y+F +L CA ++ G+++ + +++ G+ + + NSLI Y C
Sbjct: 64 --SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 178 ----------CLD---------------------MALKIFQNMSEKSEVSWNVMVDSYVR 206
C D AL +F M ++ +WN+M+ +
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 207 AGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGA-LSLGMWAHAYVMKKC------ 258
G+ ++ L +F EML+ PD YT S+++AC+ + + G HA ++K
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 259 DKNV-------------------AADVLVN---TCLVDMYCKCGSLEIAQQVFERMPYRD 296
KN + +VL ++D K G E A +VF P ++
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ +W ++I G+ +G E AL +F M+K + + VL AC+ ++ G M
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMK-SGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 357 DMMTKEYNVEPRLEHYG----CLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+ + + Y LV+L+A+ G I+EA ++ K D V W ++L A
Sbjct: 361 GCL-----IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFA 412
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 130/302 (43%), Gaps = 50/302 (16%)
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD- 225
S I A G + A ++F M E V+WN M+ SY R G A+ +F + L+ D
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ-LRFSDA 66
Query: 226 -PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG---- 280
PD Y+ +++S CA LG + G + V++ A + VN L+DMY KC
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIR---SGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 281 -----------------------------SLEIAQQVFERMPYRDVNSWNSIILGFSMHG 311
E A VF MP R +WN +I G + G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACN-HRGMVNEGLMYFDMMTKEYNVEPRLE 370
K E+ L F M++ E F P+ TF +++AC+ V G M +M K +E
Sbjct: 184 KLESCLSLFKEMLESE-FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVE 241
Query: 371 HYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGE-EMAKQVF 429
++ + + G +A+ + + + V W S++DAC K +GE E A +VF
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQ-VSWNSIIDACMK------IGETEKALEVF 294
Query: 430 EI 431
+
Sbjct: 295 HL 296
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 246/493 (49%), Gaps = 45/493 (9%)
Query: 54 HPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELY 113
H + L+ ++ ++ Y L A +F + + WNT++ YA+ N H+A+ Y
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGN-LHEALWFY 167
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
K + + ++F +L AC + L +Q H Q+L G+ S+ + S+I Y
Sbjct: 168 KEFR---RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAY 224
Query: 174 ATCG-------CLD------------------------MALKIFQNMSEKSEVSWNVMVD 202
A CG C D A K+F M EK+ VSW ++
Sbjct: 225 AKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
Query: 203 SYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
YVR G + AL +F +M+ L P+ +T S + A A + +L G H Y+++ N
Sbjct: 285 GYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT---N 341
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYF 320
V + +V + L+DMY K GSLE +++VF + D WN++I + HG AL
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 321 FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
M+K + PN T V +L+AC+H G+V EGL +F+ MT ++ + P EHY CL+DL
Sbjct: 402 DDMIKF-RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLG 460
Query: 381 RAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAY 440
RAG +E + + EMP +PD IW ++L C+ + ELG++ A ++ +++ S Y
Sbjct: 461 RAGCFKELMRKIEEMPFEPDKHIWNAIL-GVCRIHGNEELGKKAADELIKLDPE-SSAPY 518
Query: 441 VLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTT--HPKSED 498
+LLS +YA +W V LR +M + V K+ S IEI+ F D + H + E+
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEE 578
Query: 499 IYKFLNEIDEKLE 511
IY L+ + +E
Sbjct: 579 IYFILHNLAAVIE 591
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 142/355 (40%), Gaps = 68/355 (19%)
Query: 122 EEVVPDHYTFPF-----VLKACAHTFSLCEGKQVHAQLLKLGYE-SDTRICNSLIHFYAT 175
E + PF +L+ C T SL +GK +H L G++ +T + N LI Y
Sbjct: 35 ESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMK 94
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK------------- 222
CG A K+F M ++ SWN MV YV++G A VF M +
Sbjct: 95 CGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGY 154
Query: 223 -----LHDP--------------DGYTMQSVISACAGLGALSLGMWAHAYVM-------- 255
LH+ + ++ +++AC L L AH V+
Sbjct: 155 AQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNV 214
Query: 256 -------------------KKC-DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
K+C D+ D+ + T L+ Y K G +E A+++F MP +
Sbjct: 215 VLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK 274
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
+ SW ++I G+ G ALD F +M+ + P TF L A + G
Sbjct: 275 NPVSWTALIAGYVRQGSGNRALDLFRKMIAL-GVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
M + NV P L+D+++++G ++ + + K D V W +++ A
Sbjct: 334 HGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISA 387
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 237/479 (49%), Gaps = 20/479 (4%)
Query: 39 KQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
+ +H Q ++T D H L + ++ Y + R+ + W +I
Sbjct: 265 RMLHCQIVKTGFDVDMH-----LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
R + I + M++ V+ +CA S G VH +L+
Sbjct: 320 GLMRLGRAEKALIVFSE----MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
GY DT NSLI YA CG LD +L IF+ M+E+ VSWN ++ Y + + AL +F
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 218 GEML--KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
EM + D +T+ S++ AC+ GAL +G H V++ + + LV+T LVDM
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCS---LVDTALVDM 492
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y KCG LE AQ+ F+ + ++DV SW +I G+ HGK + AL+ + + PN +
Sbjct: 493 YSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLH-SGMEPNHVI 551
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
F+ VLS+C+H GMV +GL F M +++ VEP EH C+VDL RA RI++A E
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNE 455
+P + +LDA C+ + E+ + + + + E++ +G YV L +A+ RW++
Sbjct: 612 FTRPSIDVLGIILDA-CRANGKTEVEDIICEDMIELKPGD-AGHYVKLGHSFAAMKRWDD 669
Query: 456 VGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMG 514
V M G+ K PG S IE++G FF T+H S+D L + ++ G
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 163/346 (47%), Gaps = 10/346 (2%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
+L+ Y + A LF + + WNT+I YA N E+ K + M +
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMS----EILKLLYRMRGDG 240
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
+ PD TF L L G+ +H Q++K G++ D + +LI Y CG + +
Sbjct: 241 LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY 300
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLG 242
++ + + K V W VM+ +R G + AL VF EML+ D + SV+++CA LG
Sbjct: 301 RVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
+ LG H YV++ D L+ MY KCG L+ + +FERM RD+ SWN+
Sbjct: 361 SFDLGASVHGYVLR---HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNA 417
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
II G++ + AL F M +S T V +L AC+ G + G + ++ +
Sbjct: 418 IISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS 477
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ + P LVD++++ G ++ A + K D V W L+
Sbjct: 478 F-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILI 521
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 157/322 (48%), Gaps = 18/322 (5%)
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
+N+ I + +HK Q + + +M+ +++PD +TFP +LKACA L G +H
Sbjct: 14 FNSHINHLSSHGDHK-QVLSTFSSML---ANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
Q+L G+ SD I +SL++ YA G L A K+F+ M E+ V W M+ Y RAG
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 212 TALKVFGEM-LKLHDPDGYTMQSVISACAGLGALS-LGMWAHAYVMKKCDKNVAADVLVN 269
A + EM + P T+ ++S + L L +A Y D+ V
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIY-------GFDCDIAVM 182
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
++++YCKC + A+ +F++M RD+ SWN++I G++ G L +RM + +
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM-RGDGL 241
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE-YNVEPRLEHYGCLVDLFARAGRIQEA 388
P+ TF LS + G M + K ++V+ L+ L+ ++ + G+ + +
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEAS 299
Query: 389 LNLVSEMPIKPDAVIWRSLLDA 410
++ +P K D V W ++
Sbjct: 300 YRVLETIPNK-DVVCWTVMISG 320
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 168/376 (44%), Gaps = 28/376 (7%)
Query: 41 IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYA 100
IH Q L ++ S +++ Y+ L +A ++F + + W +I Y+
Sbjct: 68 IHQQVL----VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYS 123
Query: 101 RSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYE 160
R A +A L M + + P T +L+ + + + + +H + G++
Sbjct: 124 R-AGIVGEACSLVNEMRF---QGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFD 176
Query: 161 SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF--- 217
D + NS+++ Y C + A +F M ++ VSWN M+ Y G LK+
Sbjct: 177 CDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM 236
Query: 218 -GEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
G+ L+ PD T + +S + L +G H ++K D+ + T L+ MY
Sbjct: 237 RGDGLR---PDQQTFGASLSVSGTMCDLEMGRMLHCQIVK---TGFDVDMHLKTALITMY 290
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
KCG E + +V E +P +DV W +I G G+AE AL F M++ + +S
Sbjct: 291 LKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL-SSEAI 349
Query: 337 VGVLSACNHRGMVNEGL-MYFDMMTKEYNVE-PRLEHYGCLVDLFARAGRIQEALNLVSE 394
V+++C G + G ++ ++ Y ++ P L L+ ++A+ G + ++L +
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS---LITMYAKCGHLDKSLVIFER 406
Query: 395 MPIKPDAVIWRSLLDA 410
M + D V W +++
Sbjct: 407 MN-ERDLVSWNAIISG 421
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 236/472 (50%), Gaps = 23/472 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K +H +R N+ L ++ Y+ L+ + N WN+LI
Sbjct: 323 KSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
YA H+ I+ M+ + + PD +T + AC + + GKQ+H +++
Sbjct: 380 YA----HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD 435
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
SD + NSLI Y+ G +D A +F + +S V+WN M+ + + G A+ +F
Sbjct: 436 V-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFD 494
Query: 219 EMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M + + + T +VI AC+ +G+L G W H ++ K D+ +T L+DMY
Sbjct: 495 YMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK----DLFTDTALIDMYA 550
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
KCG L A+ VF M R + SW+S+I + MHG+ +A+ F +MV+ PN + F+
Sbjct: 551 KCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE-SGTKPNEVVFM 609
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
VLSAC H G V EG YF++M K + V P EH+ C +DL +R+G ++EA + EMP
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPF 668
Query: 398 KPDAVIWRSLLDAC---CKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWN 454
DA +W SL++ C K D + +++ V + +G Y LLS +YA W
Sbjct: 669 LADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD-----TGYYTLLSNIYAEEGEWE 723
Query: 455 EVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEI 506
E LR M + K PG S IEID F AG+ ++++IY+FL +
Sbjct: 724 EFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 204/472 (43%), Gaps = 65/472 (13%)
Query: 38 LKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
+ Q+HA L T P + ++++ Y+ + + + +F F P+SFM+ LI+
Sbjct: 17 VSQLHAHLLVTGRLRRDPLPV---TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIK 73
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFS-LCEGKQVHAQLLK 156
+ AI+LY ++ E + FP VL+ACA + L G +VH +++K
Sbjct: 74 CNVW-CHLLDAAIDLYHRLV---SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIK 129
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
G + D I SL+ Y G L A K+F M + V+W+ +V S + GE AL++
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189
Query: 217 FGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
F M+ +PD TM SV+ CA LG L + H + +K D + L+ M
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM---FDLDETLCNSLLTM 246
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y KCG L ++++FE++ ++ SW ++I ++ +E AL F M+K PN +T
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIEPNLVT 305
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH------------------------ 371
VLS+C G++ EG + ++P E
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRR-ELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 372 --------YGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDAC--------- 411
+ L+ L+A G + +AL L +M IKPDA S + AC
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 412 -------CKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEV 456
+ D S E + ++ GSV S + V + S WN +
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 187/361 (51%), Gaps = 15/361 (4%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
+ +L Y +L+ A ++F + W+TL+ S + ++ + M++
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS----SCLENGEVVKALRMFKCMVD 195
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
+ V PD T V++ CA L + VH Q+ + ++ D +CNSL+ Y+ CG L
Sbjct: 196 DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLS 255
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEF-DTALKVFGEMLKLH-DPDGYTMQSVISACA 239
+ +IF+ +++K+ VSW M+ SY R GEF + AL+ F EM+K +P+ T+ SV+S+C
Sbjct: 256 SERIFEKIAKKNAVSWTAMISSYNR-GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 240 GLGALSLGMWAHAY-VMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
+G + G H + V ++ D N + ++ LV++Y +CG L + V + R++
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCETVLRVVSDRNIV 371
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
+WNS+I ++ G AL F +MV ++ P++ T +SAC + G+V G
Sbjct: 372 AWNSLISLYAHRGMVIQALGLFRQMVT-QRIKPDAFTLASSISACENAGLVPLGKQIHGH 430
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
+ + + +++ L+D+++++G + A + +++ + V W S+L + SV
Sbjct: 431 VIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHRS-VVTWNSMLCGFSQNGNSV 487
Query: 419 E 419
E
Sbjct: 488 E 488
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 237/457 (51%), Gaps = 12/457 (2%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ S +L+ Y ++ A LF K + W T++ +A+ A +A+E Y+ M
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQ-AGKSLKAVEFYREMQ 209
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
E D +L+A G+ VH L + G + + SL+ YA G
Sbjct: 210 ---NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVIS 236
+++A ++F M K+ VSW ++ + + G + A + EM L PD T+ V+
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
AC+ +G+L G H Y++K+ D + T L+DMY KCG+L ++++FE + +D
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRH----VLDRVTATALMDMYSKCGALSSSREIFEHVGRKD 382
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ WN++I + +HG + + F +M + P+ TF +LSA +H G+V +G +F
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTE-SNIEPDHATFASLLSALSHSGLVEQGQHWF 441
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
+M +Y ++P +HY CL+DL ARAGR++EAL++++ + IW +LL C
Sbjct: 442 SVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHR- 500
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
++ +G+ A ++ ++ G L+S +A+A++W EV +RKLM + + K PG S
Sbjct: 501 NLSVGDIAANKILQLNPDSI-GIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSA 559
Query: 477 IEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESM 513
IE++G F D +H + + + L + ++ +
Sbjct: 560 IEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 190/373 (50%), Gaps = 15/373 (4%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
H+ QIHA + T + N + ++ + +++YA ++F + ++N++I
Sbjct: 32 HITQIHAFVISTGNLLNGSS---ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMI 88
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
Y+R N + + LY M+ E++ PD TF +KAC L +G+ V + +
Sbjct: 89 VVYSRGKN-PDEVLRLYDQMI---AEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD 144
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKV 216
GY++D +C+S+++ Y CG +D A +F M+++ + W MV + +AG+ A++
Sbjct: 145 FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 217 FGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
+ EM + D M ++ A LG +G H Y+ + + +V+V T LVDM
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR---TGLPMNVVVETSLVDM 261
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y K G +E+A +VF RM ++ SW S+I GF+ +G A A + M + F P+ +T
Sbjct: 262 YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSL-GFQPDLVT 320
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
VGVL AC+ G + G + + K + V R+ L+D++++ G + + + +
Sbjct: 321 LVGVLVACSQVGSLKTGRLVHCYILKRH-VLDRVTATA-LMDMYSKCGALSSSREIFEHV 378
Query: 396 PIKPDAVIWRSLL 408
+ D V W +++
Sbjct: 379 G-RKDLVCWNTMI 390
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 246/449 (54%), Gaps = 12/449 (2%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ YS Y R F + W T+I YA++ H +A+EL++ + ++
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV-EALELFRDVA---KKR 482
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
+ D +L+A + S+ K++H +L+ G DT I N L+ Y C + A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYAT 541
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLG 242
++F+++ K VSW M+ S G A+++F M++ D + ++SA A L
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 601
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
AL+ G H Y+++K + + +VDMY CG L+ A+ VF+R+ + + + S
Sbjct: 602 ALNKGREIHCYLLRK---GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
+I + MHG +AA++ F +M + E P+ I+F+ +L AC+H G+++EG + +M E
Sbjct: 659 MINAYGMHGCGKAAVELFDKM-RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHE 717
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGE 422
Y +EP EHY CLVD+ RA + EA V M +P A +W +LL A C+ + E+GE
Sbjct: 718 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL-AACRSHSEKEIGE 776
Query: 423 EMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGV 482
A+++ E+E G VL+S ++A RWN+V +R M G+ K PGCS IE+DG
Sbjct: 777 IAAQRLLELEPK-NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGK 835
Query: 483 AHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
H+F A D +HP+S++IY+ L+E+ KLE
Sbjct: 836 VHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 204/422 (48%), Gaps = 21/422 (4%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
+S +Q+H++ +T + + FL +++ Y L+ A ++F +F WN
Sbjct: 95 AVSQGRQLHSRIFKTFPSF---ELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWN 151
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
T+I AY S A+ LY M + E V +FP +LKACA + G ++H+
Sbjct: 152 TMIGAYV-SNGEPASALALYWNMRV---EGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE-VSWNVMVDSYVRAGEFDT 212
L+KLGY S I N+L+ YA L A ++F EK + V WN ++ SY +G+
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 213 ALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
L++F EM + P+ YT+ S ++AC G LG HA V+K ++++ V
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH--SSELYVCNA 325
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
L+ MY +CG + A+++ +M DV +WNS+I G+ + + AL++F M+
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA-GHKS 384
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ ++ +++A + G+ + K + + L+ L+D++++
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASV---ELGEEMAKQVFEIE----GSVCSGAYVLLS 444
M K D + W +++ + D V EL ++AK+ EI+ GS+ + VL S
Sbjct: 444 FLRMHDK-DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 502
Query: 445 KL 446
L
Sbjct: 503 ML 504
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 10/283 (3%)
Query: 130 TFPFVLKACAHTFSLCEGKQVHAQLLKL--GYESDTRICNSLIHFYATCGCLDMALKIFQ 187
F +VL+ C ++ +G+Q+H+++ K +E D + L+ Y CG LD A K+F
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFD 140
Query: 188 NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGY-TMQSVISACAGLGALSL 246
M +++ +WN M+ +YV GE +AL ++ M P G + +++ ACA L +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIIL 305
G H+ ++K + +VN LV MY K L A+++F+ + D WNSI+
Sbjct: 201 GSELHSLLVKLGYHSTG--FIVNA-LVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
+S GK+ L+ FR + + PNS T V L+AC+ G + K
Sbjct: 258 SYSTSGKSLETLE-LFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
L L+ ++ R G++ +A ++ +M D V W SL+
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 145/315 (46%), Gaps = 31/315 (9%)
Query: 34 TMSHLKQIHAQTLRT--IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
+M +K+IH LR +DT + + ++ Y ++ YATR+F +
Sbjct: 502 SMLIVKEIHCHILRKGLLDTV-------IQNELVDVYGKCRNMGYATRVFESIKGKDVVS 554
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
W ++I + A + N + +A+EL++ M+E + D +L A A +L +G+++H
Sbjct: 555 WTSMISSSALNGN-ESEAVELFRR---MVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
LL+ G+ + I +++ YA CG L A +F + K + + M+++Y G
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 212 TALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLG-----MWAHAYVMKKCDKNVAAD 265
A+++F +M + PD + +++ AC+ G L G + H Y ++ ++
Sbjct: 671 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHY--- 727
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERM---PYRDVNSWNSIILGFSMHGKAEAALDYFFR 322
CLVDM + + A + + M P +V W +++ H + E R
Sbjct: 728 ----VCLVDMLGRANCVVEAFEFVKMMKTEPTAEV--WCALLAACRSHSEKEIGEIAAQR 781
Query: 323 MVKIEKFVPNSITFV 337
++++E P ++ V
Sbjct: 782 LLELEPKNPGNLVLV 796
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 220/421 (52%), Gaps = 15/421 (3%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
+++ Y ++ A +F + + W +I Y + ++ A+EL + LM E
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN-ALELCR---LMQFEG 314
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
V P+ T ++ C + +GK +H ++ SD I SLI YA C +D+
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLG 242
++F S+ W+ ++ V+ AL +F M + +P+ T+ S++ A A L
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVF----ERMPYRDVN 298
L M H Y+ K + + T LV +Y KCG+LE A ++F E+ +DV
Sbjct: 435 DLRQAMNIHCYLTKT---GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
W ++I G+ MHG AL F MV+ PN ITF L+AC+H G+V EGL F
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVR-SGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
M + Y R HY C+VDL RAGR+ EA NL++ +P +P + +W +LL AC + +V
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHE-NV 609
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
+LGE A ++FE+E +G YVLL+ +YA+ RW ++ +R +M + G+ KKPG S IE
Sbjct: 610 QLGEMAANKLFELEPE-NTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Query: 479 I 479
I
Sbjct: 669 I 669
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 221/479 (46%), Gaps = 31/479 (6%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++S K +H + + H + S + Y+ + YA +LF + + +N
Sbjct: 30 SISKTKALHCHVITGGRVSGH-----ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYN 84
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEV--VPDHYTFPFVLKACAHTFSLCEGKQVH 151
+IR Y R + H AI ++ + M+ E V VPD YT+PFV KA S+ G VH
Sbjct: 85 IVIRMYVREGLY-HDAISVF---IRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVH 140
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
++L+ + D + N+L+ Y G ++MA +F M + +SWN M+ Y R G +
Sbjct: 141 GRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMN 200
Query: 212 TALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
AL +F M+ D D T+ S++ C L L +G H V +K + + V
Sbjct: 201 DALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE---EKRLGDKIEVKN 257
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
LV+MY KCG ++ A+ VF+RM RDV +W +I G++ G E AL+ R+++ E
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE-LCRLMQFEGVR 316
Query: 331 PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
PN++T ++S C VN+G ++ V + L+ ++A+ R+
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ-QVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 391 LVSEMPIKPDAVIWRSLLDACCKQD-ASVELGEEMAKQVFEIEGSVCS-----GAYVLLS 444
+ S K W +++ C + + S LG + ++E ++ + AY L+
Sbjct: 376 VFSGAS-KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 445 KLYASAS---RWNEVGLLRKLMSDKGVTK-KPGCSLIEIDGVAHEFFAGDTTHPKSEDI 499
L + + + G + L + G+ C +E AH+ F G KS+D+
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE---SAHKIFNGIQEKHKSKDV 490
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 267/553 (48%), Gaps = 60/553 (10%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
++ YS L A ++F + + WN++I Y + A + +A EL+ M +
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQ-AGYCGKAYELFTRMQ---DAN 448
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
+ P+ T+ N++I Y G A+
Sbjct: 449 LRPNIITW-----------------------------------NTMISGYIKNGDEGEAM 473
Query: 184 KIFQNMSEKSEV-----SWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISA 237
+FQ M + +V +WN+++ Y++ G+ D AL++F +M P+ T+ S++ A
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
CA L + H V+++ N+ A V L D Y K G +E ++ +F M +D+
Sbjct: 534 CANLLGAKMVREIHGCVLRR---NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDI 590
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
+WNS+I G+ +HG AL F +M K + PN T ++ A G V+EG F
Sbjct: 591 ITWNSLIGGYVLHGSYGPALALFNQM-KTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDAS 417
+ +Y++ P LEH +V L+ RA R++EAL + EM I+ + IW S L C +
Sbjct: 650 SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGC-RIHGD 708
Query: 418 VELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
+++ A+ +F +E + ++S++YA ++ K D + K G S I
Sbjct: 709 IDMAIHAAENLFSLEPE-NTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWI 767
Query: 478 EIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPD-YSGAHLVDETIDGKKSTL 536
E+ + H F GD + ++ +Y + EK+ + D Y+G ++E +G++ T
Sbjct: 768 EVRNLIHTFTTGDQSKLCTDVLYPLV----EKMSRLDNRSDQYNGELWIEE--EGREETC 821
Query: 537 RLHSERLAIAFGLLNSRPG--MPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFH 594
+HSE+ A+AFGL++S IR+ KNLR+C DCH K +S Y +I++ D H
Sbjct: 822 GIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLH 881
Query: 595 HFKDGTCSCMDYW 607
HFK+G CSC DYW
Sbjct: 882 HFKNGDCSCKDYW 894
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ +++L Y+ + A ++F + N F W+ +I AY+R + E+ K
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWR----EVAKLFR 170
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
LMM++ V+PD + FP +L+ CA+ + GK +H+ ++KLG S R+ NS++ YA CG
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 178 CLDMALKIFQNMSEKSE-----------------------------------VSWNVMVD 202
LD A K F+ M E+ V+WN+++
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 203 SYVRAGEFDTALKVFGEMLK-----------------LHD-------------------P 226
Y + G+ D A+ + +M +H+ P
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
+ T+ S +SAC+ L ++ G H+ +K DVLV LVDMY KCG LE A+
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKM---GFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 287 QVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHR 346
+VF+ + +DV +WNS+I G+ G A + F RM + PN IT+ ++S
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM-QDANLRPNIITWNTMISGYIKN 466
Query: 347 GMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK---PDAVI 403
G E + F M K+ V+ + ++ + + G+ EAL L +M P++V
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 404 WRSLLDACCKQDASVELGEEMAKQVFEIEGSV 435
SLL AC LG AK V EI G V
Sbjct: 527 ILSLLPACANL-----LG---AKMVREIHGCV 550
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 28/315 (8%)
Query: 110 IELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSL 169
+E KA+ + ++ T+ +L++C + S+ G+ +HA+ L E D + L
Sbjct: 63 LEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKL 121
Query: 170 IHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDG 228
+ YA CGC+ A K+F +M E++ +W+ M+ +Y R + K+F M+K PD
Sbjct: 122 LSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDD 181
Query: 229 YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV 288
+ ++ CA G + G H+ V+K +++ + V+ ++ +Y KCG L+ A +
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKL---GMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 289 FERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGM 348
F RM RDV +WNS++L + +GK E A++ M K E P +T+ ++ N G
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK-EGISPGLVTWNILIGGYNQLGK 297
Query: 349 VNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQ---------EALNLVSEM---P 396
+ + D+M K +E +G D+F I +AL++ +M
Sbjct: 298 CDAAM---DLMQK-------METFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 397 IKPDAVIWRSLLDAC 411
+ P+AV S + AC
Sbjct: 348 VVPNAVTIMSAVSAC 362
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 26/284 (9%)
Query: 47 RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKP-----NSFMWNTLIRAYAR 101
R D P + ++ ++ Y D A LF K N+ WN +I Y +
Sbjct: 443 RMQDANLRPN-IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 102 SANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYES 161
+ K +A+EL++ M +P+ T +L ACA+ +++H +L+ ++
Sbjct: 502 NGK-KDEALELFRKMQF---SRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 162 DTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM- 220
+ N+L YA G ++ + IF M K ++WN ++ YV G + AL +F +M
Sbjct: 558 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 221 LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV------NTCLVD 274
+ P+ T+ S+I A +G + G KK ++A D + + +V
Sbjct: 618 TQGITPNRGTLSSIILAHGLMGNVDEG--------KKVFYSIANDYHIIPALEHCSAMVY 669
Query: 275 MYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAAL 317
+Y + LE A Q + M + + W S + G +HG + A+
Sbjct: 670 LYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAI 713
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 279/561 (49%), Gaps = 22/561 (3%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
Q ++ ++ Y S ++ A +F + + N+ +N L+ + R+ H +A++L+
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNG-HGLKALKLFTD 407
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M+ + V ++ + AC +Q+H +K G + I +L+
Sbjct: 408 ML---QRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTR 464
Query: 176 CGCLDMALKIFQNMSEK--SEVSWNVMVDSYVRAGEFDTALKVFGEML---KLHDPDGYT 230
C + A ++F S + ++ Y R G D A+ +F L KL D +
Sbjct: 465 CERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLF-LDEVS 523
Query: 231 MQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFE 290
+ +++ C LG +G H Y +K +D+ + L+ MY KC + A ++F
Sbjct: 524 LTLILAVCGTLGFREMGYQIHCYALKA---GYFSDISLGNSLISMYAKCCDSDDAIKIFN 580
Query: 291 RMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH--RGM 348
M DV SWNS+I + + + AL + RM + E P+ IT V+SA +
Sbjct: 581 TMREHDVISWNSLISCYILQRNGDEALALWSRMNEKE-IKPDIITLTLVISAFRYTESNK 639
Query: 349 VNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
++ F M Y++EP EHY V + G ++EA + ++ MP++P+ + R+LL
Sbjct: 640 LSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALL 699
Query: 409 DACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGV 468
D+C + ++ + + +AK + + S Y+L S +Y+++ W+ ++R+ M ++G
Sbjct: 700 DSC-RIHSNTSVAKRVAKLILSTKPETPS-EYILKSNIYSASGFWHRSEMIREEMRERGY 757
Query: 469 TKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGA-HLVDE 527
K P S I + H F A DT+HP+ +DIY+ L + + +GY P+ VDE
Sbjct: 758 RKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDE 817
Query: 528 TIDGKKSTLRLHSERLAIAFGLLNSRP-GMPIRVFKNLRVCSDCHKVTKLISSIYNVEII 586
+ KKS L HS +LA+ +G+L+S G P+RV KN+ +C DCH+ K IS + EI+
Sbjct: 818 FM--KKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIV 875
Query: 587 VRDRARFHHFKDGTCSCMDYW 607
+RD + FHHF +G CSC D W
Sbjct: 876 LRDSSGFHHFVNGKCSCRDLW 896
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 8/226 (3%)
Query: 131 FPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
F ++L+ A + K VHA LKL E TR+ N+LI Y G A+ +F ++S
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKL-REEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGM 248
+ VS+ ++ + R ALKVF M K L P+ YT ++++AC + SLG+
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCK--CGSLEIAQQVFERMPYRDVNSWNSIILG 306
H ++K N V V+ L+ +Y K S + ++F+ +P RDV SWN+++
Sbjct: 202 QIHGLIVKSGFLN---SVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSS 258
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG 352
GK+ A D F+ M ++E F +S T +LS+C ++ G
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 187/412 (45%), Gaps = 49/412 (11%)
Query: 79 RLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKAC 138
+LF + + WNT++ + + H+A +L+ M + E D +T +L +C
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGK-SHKAFDLFYEMNRV--EGFGVDSFTLSTLLSSC 295
Query: 139 AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA------------------------ 174
+ L G+++H + +++G + + N+LI FY+
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 175 -------TCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DP 226
+ G +D A++IF N++EK+ +++N ++ + R G ALK+F +ML+ +
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
+++ S + AC + + H + +K A + + T L+DM +C + A+
Sbjct: 416 TDFSLTSAVDACGLVSEKKVSEQIHGFCIK---FGTAFNPCIQTALLDMCTRCERMADAE 472
Query: 287 QVFERMPYR--DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN 344
++F++ P + SII G++ +G + A+ F R + +K + ++ +L+ C
Sbjct: 473 EMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCG 532
Query: 345 HRGMVNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVI 403
G G ++ + Y + L + L+ ++A+ +A+ + + M + D +
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDISLGN--SLISMYAKCCDSDDAIKIFNTMR-EHDVIS 589
Query: 404 WRSLLDACCKQ---DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASR 452
W SL+ Q D ++ L M ++ EI+ + + V+ + Y +++
Sbjct: 590 WNSLISCYILQRNGDEALALWSRMNEK--EIKPDIITLTLVISAFRYTESNK 639
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 25/330 (7%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K +HA L+ + L + ++ Y L A +F P + LI
Sbjct: 100 KAVHASFLKLREEKTR-----LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVV-PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
++R + IE K M + +V P+ YTF +L AC G Q+H ++K
Sbjct: 155 FSR----LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 158 GYESDTRICNSLIHFY---ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
G+ + + NSL+ Y + C D+ LK+F + ++ SWN +V S V+ G+ A
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSCDDV-LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAF 269
Query: 215 KVFGEMLKLH--DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
+F EM ++ D +T+ +++S+C L G H ++ + ++ VN L
Sbjct: 270 DLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIR---IGLMQELSVNNAL 326
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
+ Y K ++ + ++E M +D ++ +I + G ++A++ F + + N
Sbjct: 327 IGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE-----KN 381
Query: 333 SITFVGVLSACNHRGMVNEGLMYF-DMMTK 361
+IT+ +++ G + L F DM+ +
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQR 411
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 257/465 (55%), Gaps = 17/465 (3%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+ + + ++ YS ++ + +F + + WNT+I A+ ++ + +Y+
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE--- 409
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
M ++ D+ T +L A ++ + GKQ HA L++ G + + + + LI Y+ G
Sbjct: 410 -MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSG 467
Query: 178 CLDMALKIFQN--MSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSV 234
+ ++ K+F+ +E+ + +WN M+ Y + G + VF +ML+ + P+ T+ S+
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 235 ISACAGLGALSLGMWAHAYVMKK-CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
+ AC+ +G++ LG H + +++ D+NV V + LVDMY K G+++ A+ +F +
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNV----FVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
R+ ++ ++ILG+ HG E A+ F M + P++ITFV VLSAC++ G+++EGL
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQE-SGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPD-AVIWRSLLDACC 412
F+ M + YN++P EHY C+ D+ R GR+ EA V + + + A +W SLL + C
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGS-C 701
Query: 413 KQDASVELGEEMAKQVFEIE-GSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKK 471
K +EL E +++++ + + G SG VLLS +YA +W V +R+ M +KG+ K+
Sbjct: 702 KLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKE 761
Query: 472 PGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYL 516
G S IEI G + F + D HP S +IY ++ + + + +L
Sbjct: 762 VGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFL 806
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 219/450 (48%), Gaps = 52/450 (11%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
LF+ S + Y+ L D+ + R+F + N +WNT+I Y ++ + ++IEL+ +
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN-DCLVESIELF--LE 307
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+ +E+V D T+ A + + G+Q H + K E I NSL+ Y+ CG
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG 367
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVIS 236
+ + +F +M E+ VSWN M+ ++V+ G D L + EM K D T+ +++S
Sbjct: 368 SVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS 427
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY-- 294
A + L +G HA+++++ + +N+ L+DMY K G + I+Q++FE Y
Sbjct: 428 AASNLRNKEIGKQTHAFLIRQGIQFEG----MNSYLIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
RD +WNS+I G++ +G E F +M++ + PN++T +L AC+ G V+ G
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLE-QNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS--------------------- 393
++Y ++ + LVD++++AG I+ A ++ S
Sbjct: 543 LHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 394 -------------EMPIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQVFEIEGSVCS 437
E IKPDA+ + ++L AC D +++ EEM ++V+ I+ S S
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM-REVYNIQPS--S 658
Query: 438 GAYVLLSKLYASASRWNEVGLLRKLMSDKG 467
Y ++ + R NE K + ++G
Sbjct: 659 EHYCCITDMLGRVGRVNEAYEFVKGLGEEG 688
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 200/419 (47%), Gaps = 33/419 (7%)
Query: 55 PQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYK 114
PQ + SR L + A +LF KP + +WNT+I + N H+A+ Y
Sbjct: 37 PQTPSIRSR-LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLFYS 94
Query: 115 AMMLMMEEEVVP----DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLI 170
M ++ P D YT+ LKACA T +L GK VH L++ S + NSL+
Sbjct: 95 RM-----KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLM 149
Query: 171 HFYATC----GCL--DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH 224
+ Y +C C D+ K+F NM K+ V+WN ++ YV+ G A + FG M+++
Sbjct: 150 NMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME 209
Query: 225 -DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLE 283
P + +V A + ++ + ++K D+ V D+ V + + MY + G +E
Sbjct: 210 VKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVK-DLFVVSSAISMYAELGDIE 268
Query: 284 IAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC 343
+++VF+ R++ WN++I + + +++ F + ++ V + +T++ SA
Sbjct: 269 SSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAV 328
Query: 344 NHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVI 403
+ V G + ++K + P + L+ +++R G + ++ + M + D V
Sbjct: 329 SALQQVELGRQFHGFVSKNFRELP-IVIVNSLMVMYSRCGSVHKSFGVFLSMR-ERDVVS 386
Query: 404 WRSLLDACCKQ---DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS--RWNEVG 457
W +++ A + D + L EM KQ F+I+ Y+ ++ L ++AS R E+G
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKID-------YITVTALLSAASNLRNKEIG 438
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 39 KQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
KQ+H ++R +D Q +F+ S ++ YS + YA +F + NS + T+I
Sbjct: 541 KQLHGFSIRQYLD-----QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK- 156
Y + +AI L+ + M E + PD TF VL AC+++ + EG ++ ++ +
Sbjct: 596 GYGQHG-MGERAISLF---LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV 651
Query: 157 --LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS--WNVMVDSYVRAGEFDT 212
+ S+ C + G ++ A + + + E+ ++ W ++ S GE +
Sbjct: 652 YNIQPSSEHYCC--ITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELEL 709
Query: 213 ALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK 260
A V + K ++ G L M+A K DK
Sbjct: 710 AETVSERLAKFDKGKNFS---------GYEVLLSNMYAEEQKWKSVDK 748
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 261/507 (51%), Gaps = 56/507 (11%)
Query: 39 KQIHAQTLR---TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL 95
K+IH+ LR ++ T+ AL + +Y+ D + A F + WN +
Sbjct: 350 KEIHSYILRHSYLLEDTSVGNAL------ISFYARFGDTSAAYWAFSLMSTKDIISWNAI 403
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
+ A+A S + + + ++ E + D T +LK C + + + K+VH +
Sbjct: 404 LDAFADSP----KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSV 459
Query: 156 KLGY---ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE-VSWNVMVDSYVRAGEFD 211
K G E + ++ N+L+ YA CG ++ A KIF +SE+ VS+N ++ YV +G D
Sbjct: 460 KAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHD 519
Query: 212 TALKVFGEM-----------LKLH---------------------DPDGYTMQSVISACA 239
A +F EM ++++ P+ T+ +++ CA
Sbjct: 520 DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCA 579
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
L +L L H Y+++ D+ + L+D+Y KCGSL+ A VF+ RD+
Sbjct: 580 QLASLHLVRQCHGYIIR----GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVM 635
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
+ +++ G+++HG+ + AL + M + P+ + +L+AC H G++ +GL +D +
Sbjct: 636 FTAMVAGYAVHGRGKEALMIYSHMTE-SNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ ++P +E Y C VDL AR GR+ +A + V++MP++P+A IW +LL AC + ++
Sbjct: 695 RTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN-RMD 753
Query: 420 LGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEI 479
LG +A + + E S +G +VL+S +YA+ ++W V LR LM K + K GCS +E+
Sbjct: 754 LGHSVANHLLQAE-SDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV 812
Query: 480 DGVAHEFFAGDTTHPKSEDIYKFLNEI 506
DG + F +GD +HP+ + I+ +N +
Sbjct: 813 DGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 12/352 (3%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
+L+ Y+ ++ ++F + +WN ++ + S + + +KAM +E
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHF--ADE 117
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG-CLDMA 182
P TF VL C GK +H+ ++K G E DT + N+L+ YA G A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK-LHDPDGYTMQSVISACAGL 241
F +++K VSWN ++ + A + F MLK +P+ T+ +V+ CA +
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 242 G---ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
A G H+YV+++ + V V LV Y + G +E A +F RM +D+
Sbjct: 238 DKNIACRSGRQIHSYVVQR--SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
SWN +I G++ + + A F +V P+S+T + +L C + G
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+ + + L+ +AR G A S M K D + W ++LDA
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 183/439 (41%), Gaps = 71/439 (16%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+QIH+ ++ H +F+ + ++ +Y + + A LF G + WN +I
Sbjct: 247 RQIHSYVVQRSWLQTH---VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
YA + +A +L+ L+ + +V PD T +L CA L GK++H+ +L+
Sbjct: 304 YASNCEW-FKAFQLFHN--LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 159 YE-SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA-GEFDTALKV 216
Y DT + N+LI FYA G A F MS K +SWN ++D++ + +F +
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 217 FGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+ + D T+ S++ C + + H Y +K + + + L+D Y
Sbjct: 421 HHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 277 CKCGSLEIAQQVFERMP-YRDVNSWNSIILGFSMHGKAEAALDYF--------------- 320
KCG++E A ++F + R + S+NS++ G+ G + A F
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMV 540
Query: 321 ---------------FRMVKIEKFVPNSITFVGVLSACN-----------HRGMVNEGL- 353
FR ++ PN++T + +L C H ++ GL
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG 600
Query: 354 ------MYFDMMTK-----------EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
D+ K + + L + +V +A GR +EAL + S M
Sbjct: 601 DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT 660
Query: 397 ---IKPDAVIWRSLLDACC 412
IKPD V ++L ACC
Sbjct: 661 ESNIKPDHVFITTMLTACC 679
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 131/288 (45%), Gaps = 12/288 (4%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
DH F V+KACA L G+ +H + KLG+ + + + S+++ YA C +D K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGAL 244
+ M V WN+++ + +T ++ F M + P T V+ C LG
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL-EIAQQVFERMPYRDVNSWNSI 303
G H+Y++K + D LV LV MY K G + A F+ + +DV SWN+I
Sbjct: 139 YNGKSMHSYIIK---AGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAI 195
Query: 304 ILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC---NHRGMVNEGLMYFDMMT 360
I GFS + A F M+K E PN T VL C + G +
Sbjct: 196 IAGFSENNMMADAFRSFCLMLK-EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ ++ + LV + R GRI+EA +L + M K D V W ++
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVI 301
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 254/503 (50%), Gaps = 42/503 (8%)
Query: 48 TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKH 107
+I+ +++ +L++ + ++ Y ++ A RLF + ++ WN +I YA S
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA-SEGMWS 227
Query: 108 QAIELYKAMMLMMEE-----------------------EVVPDHYTFP---------FVL 135
+A EL+ M E ++ FP L
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 136 KACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEV 195
KAC+ ++ GK++H + Y+ + N+LI Y+ C L AL +F+ E S
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC 347
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYV 254
+WN ++ Y + + + A + EML P+ T+ S++ CA + L G H Y+
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 255 MK-KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKA 313
++ KC K+ ++ LVD+Y K G + A+QV + M RD ++ S+I G+ G+
Sbjct: 408 LRRKCFKDY---TMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 314 EAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYG 373
AL F M + P+ +T V VLSAC+H +V+EG F M EY + P L+H+
Sbjct: 465 GVALALFKEMTR-SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFS 523
Query: 374 CLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEG 433
C+VDL+ RAG + +A +++ MP KP W +LL+A C + ++G+ A+++ E++
Sbjct: 524 CMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA-CHIHGNTQIGKWAAEKLLEMKP 582
Query: 434 SVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTH 493
G YVL++ +YA+A W+++ +R +M D GV K PGC+ I+ D F GDT+
Sbjct: 583 E-NPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSS 641
Query: 494 PKSEDIYKFLNEIDEKL-ESMGY 515
P++ + Y L+ +++ + ++ GY
Sbjct: 642 PEACNTYPLLDGLNQLMKDNAGY 664
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 183/407 (44%), Gaps = 48/407 (11%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L +++ +YS+ N A + + + WN LI +YA++ + E+ A M
Sbjct: 80 LVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFE----EVIAAYKRM 135
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
+ + + PD +T+P VLKAC T + G+ VH + Y+S +CN+LI Y +
Sbjct: 136 VSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNM 195
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM---------LKLHDPDGYT 230
+A ++F M E+ VSWN +++ Y G + A ++F +M + + G
Sbjct: 196 GIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGC 255
Query: 231 MQS---------------------------VISACAGLGALSLGMWAHAYVMKKCDKNVA 263
+Q+ + AC+ +GA+ LG H + +
Sbjct: 256 LQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI- 314
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
D + NT L+ MY KC L A VF + + +WNSII G++ K+E A + R
Sbjct: 315 -DNVRNT-LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEA-SHLLRE 371
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
+ + F PNSIT +L C + G + + + + + LVD++A++G
Sbjct: 372 MLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQ 427
+I A VS++ K D V + SL+D Q ++ L +EM +
Sbjct: 432 KIVAA-KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRS 477
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 102 SANHKHQAIELYKAMMLMMEEEVVPDH--YTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
S H H A + + + L V D ++ +L AC + G QVHA + G
Sbjct: 15 SHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGV 74
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
E + + L+ FY+ + A I +N + WNV++ SY + F+ + +
Sbjct: 75 EYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKR 134
Query: 220 ML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
M+ K PD +T SV+ AC ++ G H + K + + V L+ MY +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYK---SSLYVCNALISMYKR 191
Query: 279 CGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM----VKIEKFVPNSI 334
++ IA+++F+RM RD SWN++I ++ G A + F +M V++ N I
Sbjct: 192 FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNII 251
Query: 335 TFVGVLSACNHRG 347
+ G L N+ G
Sbjct: 252 SG-GCLQTGNYVG 263
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 254/510 (49%), Gaps = 45/510 (8%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+Q+H +R +F+ + ++ YY+ ++ A ++F + + WN++I
Sbjct: 152 RQVHGFVIRG----GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISG 207
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y++S + + ++YKAM+ + P+ T V +AC + L G +VH ++++
Sbjct: 208 YSQSGSFE-DCKKMYKAMLAC--SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH 264
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ D +CN++I FYA CG LD A +F MSEK V++ ++ Y+ G A+ +F
Sbjct: 265 IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFS 324
Query: 219 EMLKL-----------------HD---------------PDGYTMQSVISACAGLGALSL 246
EM + H+ P+ T+ S++ + L
Sbjct: 325 EMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKG 384
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILG 306
G HA+ ++ N ++ V T ++D Y K G L AQ+VF+ R + +W +II
Sbjct: 385 GKEIHAFAIRNGADN---NIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITA 441
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVE 366
+++HG +++A F +M + P+ +T VLSA H G + FD M +Y++E
Sbjct: 442 YAVHGDSDSACSLFDQMQCLGT-KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
Query: 367 PRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAK 426
P +EHY C+V + +RAG++ +A+ +S+MPI P A +W +LL+ +E+
Sbjct: 501 PGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVL-GDLEIARFACD 559
Query: 427 QVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEF 486
++FE+E +G Y +++ LY A RW E ++R M G+ K PG S IE + F
Sbjct: 560 RLFEMEPE-NTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSF 618
Query: 487 FAGDTTHPKSEDIYKFLNEIDEKLESMGYL 516
A D++ +S+++Y+ + + E + Y+
Sbjct: 619 IAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
H+ Q+HA R + + P FL S+++ +Y+ A +F N+F +N L+
Sbjct: 40 HVLQLHA---RIVVFSIKPDN-FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALL 95
Query: 97 RAYARSANHKHQAIELYKAMM---LMMEEEVVPDHYTFPFVLKA---CAHTFSLCEGKQV 150
AY S A L+ + + + PD + VLKA C + +QV
Sbjct: 96 IAYT-SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQV 154
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H +++ G++SD + N +I +Y C ++ A K+F MSE+ VSWN M+ Y ++G F
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 211 DTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+ K++ ML D P+G T+ SV AC L G+ H K + ++ D+ +
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK---KMIENHIQMDLSL 271
Query: 269 NTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
++ Y KCGSL+ A+ +F+ M +D ++ +II G+ HG + A+ F M I
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 329 FVPNSITFVGVLSACNHRGMVN 350
N++ G++ +H ++N
Sbjct: 332 STWNAM-ISGLMQNNHHEEVIN 352
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 15/270 (5%)
Query: 149 QVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAG 208
Q+HA+++ + D + + LI FY AL +F ++ ++ S+N ++ +Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 209 EFDTALKVF----GEMLKLHD---PDGYTMQSVISACAGLGALSLGMWA---HAYVMKKC 258
+ A +F G D PD ++ V+ A +G LG A H +V++
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG- 161
Query: 259 DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALD 318
+DV V ++ Y KC ++E A++VF+ M RDV SWNS+I G+S G E
Sbjct: 162 --GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 319 YFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDL 378
+ M+ F PN +T + V AC + GL M E +++ L ++
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMI-ENHIQMDLSLCNAVIGF 278
Query: 379 FARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+A+ G + A L EM K D+V + +++
Sbjct: 279 YAKCGSLDYARALFDEMSEK-DSVTYGAII 307
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 206/398 (51%), Gaps = 44/398 (11%)
Query: 36 SHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL 95
S LKQIH + ++ T + L +++ SS + YA+ +F+ P++F WN +
Sbjct: 34 SQLKQIHTKIIKHNLTNDQ----LLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLM 89
Query: 96 IRAYARSANHK-HQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
IR+ S NHK +A+ L+ MM+ + + D +TFPFV+KAC + S+ G QVH
Sbjct: 90 IRSL--SVNHKPREALLLFILMMISHQSQF--DKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+K G+ +D N+L+ Y CG D K+F M +S VSW M+ V + D+A
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 215 KVFGEM------------------------------LKLHD--PDGYTMQSVISACAGLG 242
VF +M +++ D P+ +T+ +++ A LG
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
+LS+G W H Y K D + T L+DMY KCGSL+ A++VF+ M + + +WNS
Sbjct: 266 SLSMGRWVHDYAHKN---GFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
+I +HG E AL F M + P++ITFVGVLSAC + G V +GL YF M +
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPD 400
Y + P EH C++ L +A +++A NLV M PD
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 133 FVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
+ L+ C++ + KQ+H +++K +D + LI ++ G A +F +
Sbjct: 25 YFLRTCSN---FSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP--DGYTMQSVISACAGLGALSLGMWA 250
S +WN+M+ S + AL +F M+ H D +T VI AC ++ LG
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCG------------------------------ 280
H +K N DV L+D+Y KCG
Sbjct: 142 HGLAIKAGFFN---DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSN 198
Query: 281 -SLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
L+ A+ VF +MP R+V SW ++I + + + + A F RM +++ PN T V +
Sbjct: 199 SQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM-QVDDVKPNEFTIVNL 257
Query: 340 LSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY--GCLVDLFARAGRIQEALNLVSEMPI 397
L A G ++ G D K V L+ + L+D++++ G +Q+A + M
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFV---LDCFLGTALIDMYSKCGSLQDARKVFDVMQG 314
Query: 398 KPDAVIWRSLLDA 410
K A W S++ +
Sbjct: 315 KSLAT-WNSMITS 326
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 244/462 (52%), Gaps = 21/462 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K IHA+ + + + P L + +L Y S D+ A +F PN WN++I
Sbjct: 320 KLIHARIIVSDSLADLP----LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+ + QA+ +Y+ ++ M PD YTF + A A GK +H Q+ KLG
Sbjct: 376 CSENG-FGEQAMLMYRRLLRMSTPR--PDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
YE + +L+ Y + A K+F M E+ V W M+ + R G + A++ F
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 219 EMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC--LVDM 275
EM + + DG+++ SVI AC+ + L G H ++ D +++ C LVDM
Sbjct: 493 EMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIR-----TGFDCVMSVCGALVDM 547
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y K G E A+ +F D+ WNS++ +S HG E AL +F ++++ F+P+++T
Sbjct: 548 YGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE-NGFMPDAVT 606
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
++ +L+AC+HRG +G ++ M KE ++ +HY C+V+L ++AG + EAL L+ +
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQS 665
Query: 396 PIKPD-AVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWN 454
P + A +WR+LL AC ++++G A+Q+ +++ + ++LLS LYA RW
Sbjct: 666 PPGNNQAELWRTLLSACVNTR-NLQIGLYAAEQILKLDPED-TATHILLSNLYAVNGRWE 723
Query: 455 EVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFF-AGDTTHPK 495
+V +R+ + +K PG S IE++ + F +GD ++P+
Sbjct: 724 DVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 157/312 (50%), Gaps = 8/312 (2%)
Query: 32 IITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
I + +QIHA L T ++ + + ++ Y L A ++F N
Sbjct: 107 ITVLKRARQIHALVL-TAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVS 165
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
+N L AY+R+ + A L M E V P+ TF +++ CA + G ++
Sbjct: 166 YNALYSAYSRNPDFASYAFPLTTHMAF---EYVKPNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
+Q++KLGY + + S++ Y++CG L+ A +IF ++ + V+WN M+ ++ + +
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 212 TALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
L F ML DP +T V++ C+ LG+ SLG HA ++ + AD+ ++
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIV---SDSLADLPLDN 339
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
L+DMYC CG + A VF R+ ++ SWNSII G S +G E A+ + R++++
Sbjct: 340 ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 331 PNSITFVGVLSA 342
P+ TF +SA
Sbjct: 400 PDEYTFSAAISA 411
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 57/318 (17%)
Query: 147 GKQVHAQLLKLG----------------YESDTRIC------------------------ 166
G +H+Q++KLG TR C
Sbjct: 69 GSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAA 128
Query: 167 -------NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT-ALKVFG 218
N+LI Y CG L+ A K+F M ++ VS+N + +Y R +F + A +
Sbjct: 129 TESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTT 188
Query: 219 EM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M + P+ T S++ CA L + +G ++ ++K + +V+V T ++ MY
Sbjct: 189 HMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK---LGYSDNVVVQTSVLGMYS 245
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
CG LE A+++F+ + RD +WN++I+G + K E L FFR + + P T+
Sbjct: 246 SCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGL-MFFRNMLMSGVDPTQFTYS 304
Query: 338 GVLSACNHRGMVNEG-LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
VL+ C+ G + G L++ ++ + + L++ L+D++ G ++EA + +
Sbjct: 305 IVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRIH 362
Query: 397 IKPDAVIWRSLLDACCKQ 414
P+ V W S++ C +
Sbjct: 363 -NPNLVSWNSIISGCSEN 379
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 33/268 (12%)
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVM--VDSYVRAGE--FDTALKVFGEMLK 222
N+LI Y C L+ A K+F M +++ V+ + V YV G +K+ +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 223 LHDPDGYTMQSVIS---ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
P SV+ C + L HA V+ N L+ MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 280 GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM---VKIEKFVPNSITF 336
GSLE A++VF++MP+R+V S+N++ +S + + Y F + + E PNS TF
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNAL---YSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 337 VGVLSACNHRGMVNEG---------LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQE 387
++ C V G L Y D + + +V L Y DL A RI +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSV---LGMYSSCGDL-ESARRIFD 258
Query: 388 ALNLVSEMPIKPDAVIWRSLLDACCKQD 415
+N DAV W +++ K D
Sbjct: 259 CVN-------NRDAVAWNTMIVGSLKND 279
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 227/424 (53%), Gaps = 11/424 (2%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L + + IL Y+ + YA R+F K N W+ +I Y + K ++ M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQ--M 297
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
L+ + + +L CA L G+ VH +K G+ D + N++I FYA G
Sbjct: 298 LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYG 357
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
L A + F + K +S+N ++ V + + ++F EM PD T+ V++
Sbjct: 358 SLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
AC+ L AL G H Y + A + + L+DMY KCG L++A++VF+ M RD
Sbjct: 418 ACSHLAALGHGSSCHGYCVVH---GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRD 474
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ SWN+++ GF +HG + AL F M + P+ +T + +LSAC+H G+V+EG F
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQE-TGVNPDEVTLLAILSACSHSGLVDEGKQLF 533
Query: 357 DMMTK-EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQD 415
+ M++ ++NV PR++HY C+ DL ARAG + EA + V++MP +PD + +LL AC
Sbjct: 534 NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYK 593
Query: 416 ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
+ ELG E++K++ + + + + VLLS Y++A RW + +R + +G+ K PG S
Sbjct: 594 -NAELGNEVSKKMQSLGET--TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Query: 476 LIEI 479
+++
Sbjct: 651 WVDV 654
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 191/392 (48%), Gaps = 20/392 (5%)
Query: 41 IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKP--NSFMWNTLIRA 98
IH L+ T + L +R+ Y+S ++ A +F P N W+ +IRA
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRL---YASCNEVELARHVFDEIPHPRINPIAWDLMIRA 77
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
YA S + +A++LY M+ V P YT+PFVLKACA ++ +GK +H+ +
Sbjct: 78 YA-SNDFAEKALDLYYKML---NSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ +D +C +L+ FYA CG L+MA+K+F M ++ V+WN M+ + + +F
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 219 EMLKLH--DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+M ++ P+ T+ + A GAL G H Y + N D++V T ++D+Y
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN---DLVVKTGILDVY 250
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
K + A++VF+ ++ +W+++I G+ + + A + FF+M+ + +
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310
Query: 337 VG-VLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
+G +L C G ++ G K + L ++ +A+ G + +A SE+
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGFILD-LTVQNTIISFYAKYGSLCDAFRQFSEI 369
Query: 396 PIKPDAVIWRSLLDAC---CKQDASVELGEEM 424
+K D + + SL+ C C+ + S L EM
Sbjct: 370 GLK-DVISYNSLITGCVVNCRPEESFRLFHEM 400
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 160/547 (29%), Positives = 262/547 (47%), Gaps = 87/547 (15%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+ L + + +L Y + A LF N WN +I+ +++ + + A+++++
Sbjct: 191 ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE-SAVKIFE- 248
Query: 116 MMLMMEEEVVPDHYTFPFVL----------------------------KACAHTFSLCE- 146
M EE PD T+ VL +A A FS+C
Sbjct: 249 --WMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAE 306
Query: 147 ------GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVM 200
++VH ++K G+E N+LIH Y G + A +F+ + K SWN +
Sbjct: 307 LEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL 366
Query: 201 VDSYVRAGEFDTALKVFGEMLKLHD----------------------------------- 225
+ S+V AG+ D AL +F E+ +++
Sbjct: 367 ITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Query: 226 -----PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG 280
+ T+ ++S CA L AL+LG H +V++ +++ ++LV LV+MY KCG
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHGHVIRT---SMSENILVQNALVNMYAKCG 483
Query: 281 SLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVL 340
L VFE + +D+ SWNSII G+ MHG AE AL F RM+ F P+ I V VL
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMIS-SGFHPDGIALVAVL 542
Query: 341 SACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPD 400
SAC+H G+V +G F M+K + +EP+ EHY C+VDL R G ++EA +V MP++P
Sbjct: 543 SACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPK 602
Query: 401 AVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLR 460
+ +LL++ C+ +V++ E +A Q+ +E +G+Y+LLS +Y++ RW E +R
Sbjct: 603 VCVLGALLNS-CRMHKNVDIAEGIASQLSVLEPER-TGSYMLLSNIYSAGGRWEESANVR 660
Query: 461 KLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPDYS 520
L K + K G S IE+ ++F +G + E IY L ++ + G P +
Sbjct: 661 ALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG--PTHD 718
Query: 521 GAHLVDE 527
G + D+
Sbjct: 719 GNNYEDD 725
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 166/371 (44%), Gaps = 56/371 (15%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGK---PNS 89
+T +Q+HAQ L + D +L + ++ Y+ L L A +F +
Sbjct: 67 LTAQQCRQVHAQVLLS-DFIFRSGSL--AANLISVYARLGLLLDARNVFETVSLVLLSDL 123
Query: 90 FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAH--TFSLCEG 147
+WN++++A +++ A+ELY+ M + + D Y P +L+AC + F LC
Sbjct: 124 RLWNSILKANVSHGLYEN-ALELYRGMR---QRGLTGDGYILPLILRACRYLGRFGLC-- 177
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
+ H Q++++G + + + N L+ Y G + A +F M ++ +SWNVM+ + +
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 208 GEFDTALKVFGEMLKLH-DPDGYTMQSVI------------------------------- 235
+ ++A+K+F M + PD T SV+
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 236 ----SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
S CA L ALS+ H YV+K + L+ +Y K G ++ A+ +F +
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPS---RNALIHVYGKQGKVKDAEHLFRQ 354
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIE---KFVPNSITFVGVLSACNHRGM 348
+ + + SWNS+I F GK + AL F + ++ N +T+ V+ CN +G
Sbjct: 355 IRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 349 VNEGLMYFDMM 359
++ L YF M
Sbjct: 415 GDDSLEYFRQM 425
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 235/445 (52%), Gaps = 21/445 (4%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
Q+H ++T + + + + + YSS D A ++F + + WNT+I +Y
Sbjct: 309 QVHGLAIKT----GYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
++ K A+ +YK M ++ V PD +TF +L A + L + V A ++K G
Sbjct: 365 NQAKLGK-SAMSVYKRMHII---GVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGL 417
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
S I N+LI Y+ G ++ A +F+ K+ +SWN ++ + G L+ F
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477
Query: 220 MLKLHD---PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+L+ PD YT+ +++S C +L LG HAYV++ + L+ L++MY
Sbjct: 478 LLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ---FKETLIGNALINMY 534
Query: 277 CKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITF 336
+CG+++ + +VF +M +DV SWNS+I +S HG+ E A++ + M K +P++ TF
Sbjct: 535 SQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATF 594
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV--SE 394
VLSAC+H G+V EGL F+ M + + V ++H+ CLVDL RAG + EA +LV SE
Sbjct: 595 SAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISE 654
Query: 395 MPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWN 454
I +W +L AC ++LG+ +AK + E E S YV LS +YA A W
Sbjct: 655 KTIGSRVDVWWALFSACAAH-GDLKLGKMVAKLLMEKEKDDPS-VYVQLSNIYAGAGMWK 712
Query: 455 EVGLLRKLMSDKGVTKKPGCSLIEI 479
E R+ ++ G K+ GCS + +
Sbjct: 713 EAEETRRAINMIGAMKQRGCSWMRL 737
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 148/294 (50%), Gaps = 13/294 (4%)
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M+E + P TF V+ +C+ G QVH +K GYE T + N+ + Y++
Sbjct: 282 MLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFED 338
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISA 237
A K+F+++ EK V+WN M+ SY +A +A+ V+ M + PD +T S+++
Sbjct: 339 FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT 398
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
L L + A ++K +++ + ++ L+ Y K G +E A +FER +++
Sbjct: 399 SLDLDVLEM---VQACIIK---FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNL 452
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIE-KFVPNSITFVGVLSACNHRGMVNEGLMYF 356
SWN+II GF +G L+ F +++ E + +P++ T +LS C + G
Sbjct: 453 ISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTH 512
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+ + + L L++++++ G IQ +L + ++M K D V W SL+ A
Sbjct: 513 AYVLRHGQFKETLIG-NALINMYSQCGTIQNSLEVFNQMSEK-DVVSWNSLISA 564
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 191/404 (47%), Gaps = 32/404 (7%)
Query: 47 RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSF-MWNTLIRAYARSANH 105
+ D + P ++ ++ +L L D+ YA +F + + +WN +I S H
Sbjct: 113 KKFDEIDEPD-VYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYH 171
Query: 106 KHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRI 165
+ ++EL++ M + V D + F +L C + SL GKQVH+ ++K G+ + +
Sbjct: 172 E-TSVELFREMHKL---GVRHDKFGFATILSMCDYG-SLDFGKQVHSLVIKAGFFIASSV 226
Query: 166 CNSLIHFYATCGCLDMALKIFQ--NMSEKSEVSWNVMVDSYVRAG-EFDTALKVFGEMLK 222
N+LI Y C + A +F+ +++ + +V++NV++D AG + D +L VF +ML+
Sbjct: 227 VNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL--AGFKRDESLLVFRKMLE 284
Query: 223 LH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGS 281
P T SV+ +C+ ++G H +K + LV+ + MY
Sbjct: 285 ASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKY---TLVSNATMTMYSSFED 338
Query: 282 LEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
A +VFE + +D+ +WN++I ++ ++A+ + RM I P+ TF +L+
Sbjct: 339 FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM-HIIGVKPDEFTFGSLLA 397
Query: 342 AC---NHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
+ MV ++ F + +K +E L+ +++ G+I++A +L+ E ++
Sbjct: 398 TSLDLDVLEMVQACIIKFGLSSK-------IEISNALISAYSKNGQIEKA-DLLFERSLR 449
Query: 399 PDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVL 442
+ + W +++ E G E + E E + AY L
Sbjct: 450 KNLISWNAIISGFYHNGFPFE-GLERFSCLLESEVRILPDAYTL 492
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 126 PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL------ 179
PD Y+ + H G QVH ++ G + + N+L+ Y G L
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 180 -------------------------DMALKIFQNMSEKSEVS-WNVMVDSYVRAGEFDTA 213
+ A ++F M E+ +V+ WN M+ +G +T+
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 214 LKVFGEMLKL---HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
+++F EM KL HD G+ +++S C G+L G H+ V+K A +VN
Sbjct: 175 VELFREMHKLGVRHDKFGFA--TILSMC-DYGSLDFGKQVHSLVIKA--GFFIASSVVN- 228
Query: 271 CLVDMYCKCGSLEIAQQVFER--MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
L+ MY C + A VFE + RD ++N +I G + + E+ L FR +
Sbjct: 229 ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL--VFRKMLEAS 286
Query: 329 FVPNSITFVGVLSACNHRGM 348
P +TFV V+ +C+ M
Sbjct: 287 LRPTDLTFVSVMGSCSCAAM 306
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 229/415 (55%), Gaps = 20/415 (4%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNS--FMWNTLIRAYARSANHKHQAIELYKA 115
L + S+++ Y+S A +F K +S F WN+LI YA ++ A+ LY
Sbjct: 127 LGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYE-DAMALY-- 183
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M E+ V PD +TFP VLKAC S+ G+ +H L+K G+ D + N+L+ YA
Sbjct: 184 -FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSV 234
CG + A +F + K VSWN M+ Y+ G AL +F M++ +PD + SV
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
+ A + + G H +V++ + + ++ V L+ +Y K G L A +F++M
Sbjct: 303 L---ARVLSFKHGRQLHGWVIR---RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
RD SWN+II S H K L YF +M + P+ ITFV VLS C + GMV +G
Sbjct: 357 RDTVSWNAII---SAHSKNSNGLKYFEQMHRANA-KPDGITFVSVLSLCANTGMVEDGER 412
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL-VSEMPIKPDAVIWRSLLDACCK 413
F +M+KEY ++P++EHY C+V+L+ RAG ++EA ++ V EM ++ +W +LL AC
Sbjct: 413 LFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYL 472
Query: 414 QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGV 468
+ ++GE A+++FE+E + LL ++Y+ A R +V +R++M D+G+
Sbjct: 473 H-GNTDIGEVAAQRLFELEPD-NEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 155/308 (50%), Gaps = 16/308 (5%)
Query: 131 FPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
F +L+ C ++ G +VH + ++ I + L+ YA+CG ++A ++F MS
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 191 EK--SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLG 247
++ S +WN ++ Y G+++ A+ ++ +M + PD +T V+ AC G+G++ +G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 248 MWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGF 307
H ++K + DV V LV MY KCG + A+ VF+ +P++D SWNS++ G+
Sbjct: 215 EAIHRDLVK---EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGY 271
Query: 308 SMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC--NHRGMVNEGLMYFDMMTKEYNV 365
HG ALD F MV+ P+ + VL+ G G + M E +V
Sbjct: 272 LHHGLLHEALDIFRLMVQ-NGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMA 425
L+ L+++ G++ +A + +M ++ D V W +++ A K ++ E+M
Sbjct: 331 A------NALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISAHSKNSNGLKYFEQMH 383
Query: 426 KQVFEIEG 433
+ + +G
Sbjct: 384 RANAKPDG 391
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 240/456 (52%), Gaps = 31/456 (6%)
Query: 31 GIITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG---KP 87
G++TM KQ+H +++ + P F S ++ YS+ L YA +FH
Sbjct: 252 GLLTMG--KQLHCCVVKS-GLESSP---FAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMME---EEVVPDHYTFPFVLKACAHTFSL 144
+ +WN+++ + N +++A A+ L+++ ++ D YT LK C + +L
Sbjct: 306 SVAVWNSMLSGFL--INEENEA-----ALWLLLQIYQSDLCFDSYTLSGALKICINYVNL 358
Query: 145 CEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSY 204
G QVH+ ++ GYE D + + L+ +A G + A K+F + K ++++ ++
Sbjct: 359 RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGC 418
Query: 205 VRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
V++G A +F E++KL D D + + +++ C+ L +L G H +KK
Sbjct: 419 VKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKK---GYE 475
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
++ + T LVDMY KCG ++ +F+ M RDV SW II+GF +G+ E A YF +M
Sbjct: 476 SEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
+ I PN +TF+G+LSAC H G++ E + M EY +EP LEHY C+VDL +AG
Sbjct: 536 INI-GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAG 594
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLLDACC--KQDASVELGEEMAKQVFEIEGSVCSGAYV 441
QEA L+++MP++PD IW SLL AC K V + E + F + SV Y
Sbjct: 595 LFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSV----YT 650
Query: 442 LLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
LS YA+ W+++ +R+ G K+ G S I
Sbjct: 651 SLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 184/394 (46%), Gaps = 36/394 (9%)
Query: 32 IITMSHLKQIHAQTLRTIDTTNHPQALFL-----YSRILHYYSSLADLNYATRLFHHFGK 86
++ M+ + ++ + R I+ + + + ++ ++ Y ++ A LFH +
Sbjct: 142 VVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ 201
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
PN WN LI + + + A+E ++ M E +V D + P LKAC+ L
Sbjct: 202 PNVVSWNCLISGFVDKGSPR--ALEF---LVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF--QNMSEKSEVS-WNVMVDS 203
GKQ+H ++K G ES ++LI Y+ CG L A +F + ++ S V+ WN M+
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 204 YVRAGEFDTALKVFGEMLKLHDP----DGYTMQSVISACAGLGALSLGMWAHAYVMKKCD 259
++ E + AL + +L+++ D YT+ + C L LG+ H+ V+
Sbjct: 317 FLINEENEAALWL---LLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV--- 370
Query: 260 KNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDY 319
D +V + LVD++ G+++ A ++F R+P +D+ +++ +I G G A
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 320 FFRMVKI----EKFVPNSITFVGVLSACNHRGMVNEGLMYFDM-MTKEYNVEPRLEHYGC 374
F ++K+ ++F+ ++I L C+ + G + + K Y EP
Sbjct: 431 FRELIKLGLDADQFIVSNI-----LKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT--A 483
Query: 375 LVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
LVD++ + G I + L M ++ D V W ++
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGII 516
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 170/393 (43%), Gaps = 45/393 (11%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
Q +F+ + ++ Y L+ A ++F + N W T++ Y S ++AIELY+
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT-SDGKPNKAIELYRR 96
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M+ EE + + + VLKAC + G V+ ++ K D + NS++ Y
Sbjct: 97 ML--DSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVK 154
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH----------- 224
G L A F+ + S SWN ++ Y +AG D A+ +F M + +
Sbjct: 155 NGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 225 ----DP----------------DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
P DG+ + + AC+ G L++G H V+K + +
Sbjct: 215 VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVK---SGLES 271
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVF--ERMPYR-DVNSWNSIILGFSMHGKAEAALDYFF 321
+ L+DMY CGSL A VF E++ V WNS++ GF ++ + EAAL +
Sbjct: 272 SPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAAL-WLL 330
Query: 322 RMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM-MTKEYNVEPRLEHYGCLVDLFA 380
+ +S T G L C + + GL + + Y ++ + LVDL A
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGS--ILVDLHA 388
Query: 381 RAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK 413
G IQ+A L +P K D + + L+ C K
Sbjct: 389 NVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVK 420
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 41/311 (13%)
Query: 135 LKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE 194
L+ C + G+ + A ++K G + I N++I Y L A K+F MSE++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHA 252
V+W MV Y G+ + A++++ ML + + + +V+ AC +G + LG+ +
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 253 YVMKKCDKNVAADVLVNTCLVDM-------------------------------YCKCGS 281
+ K +N+ DV++ +VDM YCK G
Sbjct: 132 RIGK---ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 282 LEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
++ A +F RMP +V SWN +I GF G AL++ RM + E V + L
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQR-EGLVLDGFALPCGLK 246
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV--SEMPIKP 399
AC+ G++ G + K +E L+D+++ G + A ++ ++ +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 400 DAVIWRSLLDA 410
+W S+L
Sbjct: 306 SVAVWNSMLSG 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
C + A G A+V+K+ ++ +V + ++ MY L A +VF+ M R++
Sbjct: 15 CGKVQAFKRGESIQAHVIKQ---GISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
+W +++ G++ GK A++ + RM+ E+ N + VL AC G + G++ ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 358 MMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK---Q 414
+ KE N+ + +VD++ + GR+ EA + E+ ++P + W +L+ CK
Sbjct: 132 RIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCKAGLM 189
Query: 415 DASVELGEEMAK 426
D +V L M +
Sbjct: 190 DEAVTLFHRMPQ 201
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/486 (30%), Positives = 241/486 (49%), Gaps = 63/486 (12%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K+IHA ++T L + ++L + L+YA ++F KP +N +I
Sbjct: 54 KKIHADIIKT----GFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVP----DHYTFPFVLKACAH-------TFSLCEG 147
Y + L K ++L+++ D YT VLKA SLC
Sbjct: 110 YLKHG--------LVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC-- 159
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
+ VHA+++K E D + +L+ Y G L+ A +F+ M +++ V M+ Y+
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 208 GEFDTALKVF---------------------GEMLKLH------------DPDGYTMQSV 234
G + A ++F GE K P+ T SV
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
I AC+ L + +G HA +MK V + + + L+DMY KCG + A++VF++M
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKS---GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE 336
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
++V SW S+I G+ +G E AL+ F RM + + PN +TF+G LSAC+H G+V++G
Sbjct: 337 KNVFSWTSMIDGYGKNGNPEEALELFTRMKEF-RIEPNYVTFLGALSACSHSGLVDKGYE 395
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
F+ M ++Y+++P++EHY C+VDL RAG + +A MP +PD+ IW +LL + C
Sbjct: 396 IFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSS-CNL 454
Query: 415 DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGC 474
+VEL A ++F++ GAY+ LS +YAS +W+ V +R++M + ++K G
Sbjct: 455 HGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGR 514
Query: 475 SLIEID 480
S D
Sbjct: 515 SWTSED 520
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 141/283 (49%), Gaps = 7/283 (2%)
Query: 36 SHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL 95
+++K ++ RT+ T + + + ++ Y + + A +F+ + ++N +
Sbjct: 184 TYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAM 243
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
+ ++RS +++++Y + M P+ TF V+ AC+ S G+QVHAQ++
Sbjct: 244 VEGFSRSGETAKRSVDMY---ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIM 300
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
K G + ++ +SL+ YA CG ++ A ++F M EK+ SW M+D Y + G + AL+
Sbjct: 301 KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALE 360
Query: 216 VFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
+F M + +P+ T +SAC+ G + G + + D ++ + C+VD
Sbjct: 361 LFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQR--DYSMKPKMEHYACIVD 418
Query: 275 MYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAA 316
+ + G L A + MP R D + W +++ ++HG E A
Sbjct: 419 LMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 147/327 (44%), Gaps = 49/327 (14%)
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
GK++HA ++K G++ D I L+ + CGCL A ++F + + + ++N M+ Y++
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 207 AGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGAL-----SLGMWAHAYVMKKCDK 260
G L + M DGYT+ V+ A G+ SL HA ++ KCD
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII-KCD- 170
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERM---------------------------- 292
V D ++ T LVD Y K G LE A+ VFE M
Sbjct: 171 -VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 293 ---PYRDVNSWNSIILGFSMHGK-AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGM 348
+D+ +N+++ GFS G+ A+ ++D + M + F PN TF V+ AC+
Sbjct: 230 NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQR-AGFHPNISTFASVIGACSVLTS 288
Query: 349 VNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
G + K V ++ L+D++A+ G I +A + +M K + W S++
Sbjct: 289 HEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-NVFSWTSMI 346
Query: 409 DACCKQ---DASVELGEEMAKQVFEIE 432
D K + ++EL M + F IE
Sbjct: 347 DGYGKNGNPEEALELFTRMKE--FRIE 371
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 255/518 (49%), Gaps = 82/518 (15%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
L + +L++Y + + YA +F + + WN +I Y + AI + + M L
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG-LVEDAIYMCQLMRL 368
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
E++ D T ++ A A T +L GK+V ++ +ESD + ++++ YA CG
Sbjct: 369 ---EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGS 425
Query: 179 LDMALKIFQNMSEK-----------------------------------SEVSWNVMVDS 203
+ A K+F + EK + ++WN+++ S
Sbjct: 426 IVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILS 485
Query: 204 YVRAGEFDTALKVFGEML--------------------------------KLHD----PD 227
+R G+ D A +F +M K+ + P+
Sbjct: 486 LLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Query: 228 GYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQ 287
+++ +SACA L +L +G H Y+++ ++ V + T LVDMY KCG + A++
Sbjct: 546 AFSITVALSACAHLASLHIGRTIHGYIIRNLQH--SSLVSIETSLVDMYAKCGDINKAEK 603
Query: 288 VFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
VF Y ++ N++I ++++G + A+ +R ++ P++IT VLSACNH G
Sbjct: 604 VFGSKLYSELPLSNAMISAYALYGNLKEAI-ALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 348 MVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSL 407
+N+ + F + + +++P LEHYG +VDL A AG ++AL L+ EMP KPDA + +SL
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSL 722
Query: 408 LDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKG 467
+ +C KQ + EL + +++++ E E SG YV +S YA W+EV +R++M KG
Sbjct: 723 VASCNKQRKT-ELVDYLSRKLLESEPE-NSGNYVTISNAYAVEGSWDEVVKMREMMKAKG 780
Query: 468 VTKKPGCSLIEIDGV--AHEFFAGDTTHPKSEDIYKFL 503
+ KKPGCS I+I G H F A D TH + +I L
Sbjct: 781 LKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 21/390 (5%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNT 94
+S KQIHA+ L+ D + + ++ ++++ +Y+ L A LF N F W
Sbjct: 86 LSTGKQIHARILKNGDF--YARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143
Query: 95 LIRAYARSANHKHQAIELYKAMML----MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
+I R I L + ++ M+E E+ PD++ P V KAC G+ V
Sbjct: 144 IIGVKCR--------IGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
H ++K G E + +SL Y CG LD A K+F + +++ V+WN ++ YV+ G+
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255
Query: 211 DTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN 269
+ A+++F +M K +P T+ + +SA A +G + G +HA + + D ++
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV---NGMELDNILG 312
Query: 270 TCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKF 329
T L++ YCK G +E A+ VF+RM +DV +WN II G+ G E A+ Y +++++EK
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAI-YMCQLMRLEKL 371
Query: 330 VPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL 389
+ +T ++SA + G ++ E + ++D++A+ G I +A
Sbjct: 372 KYDCVTLATLMSAAARTENLKLG-KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA- 429
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
V + ++ D ++W +LL A + S E
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 183/359 (50%), Gaps = 15/359 (4%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+F+ S + Y L+ A+++F N+ WN L+ Y ++ ++ +AI L+ M
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE-EAIRLFSDMR 266
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
++ V P T L A A+ + EGKQ HA + G E D + SL++FY G
Sbjct: 267 ---KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP--DGYTMQSVI 235
++ A +F M EK V+WN+++ YV+ G + A+ + ++++L D T+ +++
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC-QLMRLEKLKYDCVTLATLM 382
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
SA A L LG Y ++ + +D+++ + ++DMY KCGS+ A++VF+ +
Sbjct: 383 SAAARTENLKLGKEVQCYCIR---HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
D+ WN+++ ++ G + AL F+ M ++E PN IT+ ++ + G V+E
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGM-QLEGVPPNVITWNLIILSLLRNGQVDEAKDM 498
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDAC 411
F M + + P L + +++ + G +EA+ + +M ++P+A L AC
Sbjct: 499 FLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 19/289 (6%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLG--YESDTRICNSLIHFYATCGCLDMALKIFQNMSE 191
+L+ C + L GKQ+HA++LK G Y + I L+ FYA C L++A +F +
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV 135
Query: 192 KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWA 250
++ SW ++ R G + AL F EML+ PD + + +V AC L G
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMH 310
H YV+K ++ V V + L DMY KCG L+ A +VF+ +P R+ +WN++++G+ +
Sbjct: 196 HGYVVKSGLEDC---VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG-----LMYFDMMTKEYNV 365
GK E A+ F M K + P +T LSA + G V EG + + M + +
Sbjct: 253 GKNEEAIRLFSDMRK-QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
L ++ C V L E +V + + D V W ++ +Q
Sbjct: 312 GTSLLNFYCKVGLI-------EYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 226/416 (54%), Gaps = 14/416 (3%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKP-NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEE 122
+L Y L+ A +LF + N WNT+++ Y + H + IEL++ + + E
Sbjct: 372 LLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV-KCIELFRKIQNLGIE 430
Query: 123 EVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMA 182
D + V+ +C+H ++ GK +H ++K + + NSLI Y G L +A
Sbjct: 431 ---IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVA 487
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGL 241
++F ++ + ++WN M+ SYV + + A+ +F M+ + P T+ +++ AC
Sbjct: 488 WRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNT 546
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
G+L G H Y+ + ++ ++ L+DMY KCG LE ++++F+ +D WN
Sbjct: 547 GSLERGQMIHRYIT---ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK 361
+I G+ MHG E+A+ F +M + + P TF+ +LSAC H G+V +G F M
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESD-VKPTGPTFLALLSACTHAGLVEQGKKLFLKM-H 661
Query: 362 EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELG 421
+Y+V+P L+HY CLVDL +R+G ++EA + V MP PD VIW +LL +C E+G
Sbjct: 662 QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTH-GEFEMG 720
Query: 422 EEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
MA++ + G Y++L+ +Y++A +W E R++M + GV K+ G S++
Sbjct: 721 IRMAERAVASDPQN-DGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 144/283 (50%), Gaps = 18/283 (6%)
Query: 49 IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQ 108
I T + +F+ S+++ Y+S N ++R+FH + + F+WN++I+A+ + ++ +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYA-R 108
Query: 109 AIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK-LGYESDTRICN 167
++ + +M+L + PDH+T P V+ ACA G VH +LK G++ +T +
Sbjct: 109 SLCFFFSMLLSGQS---PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGA 165
Query: 168 SLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-- 225
S ++FY+ CG L A +F M ++ V+W ++ +V+ GE + L G + K+H
Sbjct: 166 SFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL---GYLCKMHSAG 222
Query: 226 -----PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG 280
P+ T++ AC+ LGAL G H + +K +A+ V + + Y K G
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVK---NGLASSKFVQSSMFSFYSKSG 279
Query: 281 SLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
+ A F + D+ SW SII + G E + D F+ M
Sbjct: 280 NPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 16/289 (5%)
Query: 39 KQIHAQTLRT-IDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
K +H ++T +D T + + + ++ Y + DL A R+F N WN +I
Sbjct: 453 KSLHCYVVKTSLDLT-----ISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIA 506
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
+Y +AI L+ M+ E P T +L AC +T SL G+ +H + +
Sbjct: 507 SYVH-CEQSEKAIALFDRMV---SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
+E + + +LI YA CG L+ + ++F ++K V WNVM+ Y G+ ++A+ +F
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 622
Query: 218 GEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+M + P G T +++SAC G + G +K +V ++ +CLVD+
Sbjct: 623 DQMEESDVKPTGPTFLALLSACTHAGLVEQG---KKLFLKMHQYDVKPNLKHYSCLVDLL 679
Query: 277 CKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYFFRMV 324
+ G+LE A+ MP+ D W +++ HG+ E + R V
Sbjct: 680 SRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAV 728
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 14/308 (4%)
Query: 138 CAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSW 197
C + SL ++ +A ++ G + + + LI YA+ G +++ ++F ++ + W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 198 NVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMK 256
N ++ ++ G++ +L F ML PD +T V+SACA L +G + H V+K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 257 KC--DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAE 314
D+N A V V Y KCG L+ A VF+ MP RDV +W +II G +G++E
Sbjct: 154 HGGFDRNTA----VGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESE 209
Query: 315 AALDYFFRMVKIEKFV--PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY 372
L Y +M V PN T AC++ G + EG K +
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ- 268
Query: 373 GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQVF 429
+ ++++G EA E+ D W S++ + + + S ++ EM +
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELG-DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Query: 430 EIEGSVCS 437
+G V S
Sbjct: 328 HPDGVVIS 335
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 168/375 (44%), Gaps = 15/375 (4%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
+ +++YS L A +F + W +I + + N + + Y M
Sbjct: 165 ASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQ--NGESEGGLGYLCKMHSAG 222
Query: 122 EEV-VPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
+V P+ T +AC++ +L EG+ +H +K G S + +S+ FY+ G
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS 282
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACA 239
A F+ + ++ SW ++ S R+G+ + + +F EM K PDG + +I+
Sbjct: 283 EAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELG 342
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVN 298
+ + G H +V++ C + D V L+ MYCK L +A+++F R+ +
Sbjct: 343 KMMLVPQGKAFHGFVIRHC---FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE 399
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
+WN+++ G+ K FR ++ +S + V+S+C+H G V G
Sbjct: 400 AWNTMLKGYGKM-KCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA---CCKQD 415
+ K +++ + L+DL+ + G + A + E + + W +++ + C + +
Sbjct: 459 VVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCE--ADTNVITWNAMIASYVHCEQSE 515
Query: 416 ASVELGEEMAKQVFE 430
++ L + M + F+
Sbjct: 516 KAIALFDRMVSENFK 530
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 216/424 (50%), Gaps = 47/424 (11%)
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
++NTLIR+Y + +K ++ L+ M+ V P++ TFP ++KA +FS+ G +
Sbjct: 53 VYNTLIRSYLTTGEYK-TSLALFTHML---ASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCL------------------------------- 179
H Q LK G+ D + S + FY G L
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK----LHDPDGYTMQSVI 235
D A + FQ M VSW +++ + + G AL VFGEM++ + P+ T SV+
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 236 SACAGL--GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
S+CA G + LG H YVM K + + T L+DMY K G LE+A +F+++
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVM---SKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
+ V +WN+II + +G+ + AL+ F M+K PN IT + +L+AC +V+ G+
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALE-MFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK 413
F + EY + P EHYGC+VDL RAG + +A N + +P +PDA + +LL A CK
Sbjct: 345 QLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGA-CK 403
Query: 414 QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPG 473
+ ELG + KQ+ ++ C G YV LS A S W+E +RK M + G+ K P
Sbjct: 404 IHENTELGNTVGKQLIGLQPQHC-GQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462
Query: 474 CSLI 477
S++
Sbjct: 463 YSVL 466
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 37/253 (14%)
Query: 192 KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWA 250
K++ +N ++ SY+ GE+ T+L +F ML H P+ T S+I A ++S G+
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 251 HAYVMKKC---DKNVAA-------------------DVLVNTCLV------DMYCKCGSL 282
H +K+ D V D ++N C+V D + G +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV--PNSITFVGVL 340
+ A + F+RMP DV SW ++I GFS G AL F M++ E+ V PN TFV VL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 341 SACNH--RGMVNEG-LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
S+C + +G + G ++ +M+KE + L+D++ +AG ++ AL + ++
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKE--IILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 398 KPDAVIWRSLLDA 410
K W +++ A
Sbjct: 287 K-KVCAWNAIISA 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 10/240 (4%)
Query: 72 ADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTF 131
+++YA F + W T+I +++ H +A+ ++ M+ + P+ TF
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA-KALMVFGEMIQNERAVITPNEATF 224
Query: 132 PFVLKACAH--TFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM 189
VL +CA+ + GKQ+H ++ T + +L+ Y G L+MAL IF +
Sbjct: 225 VSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK---LHDPDGYTMQSVISACAGLGALSL 246
+K +WN ++ + G AL++F EM+K +H P+G T+ ++++ACA + L
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMF-EMMKSSYVH-PNGITLLAILTACARSKLVDL 342
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILG 306
G+ + + + + C+VD+ + G L A + +P+ S +LG
Sbjct: 343 GIQLFSSICS--EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLG 400
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 247/510 (48%), Gaps = 91/510 (17%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYK-AMMLM 119
++ +++ Y D+ A RLF + N W +I +A + ELY+ A+ML
Sbjct: 234 WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWN--------ELYREALMLF 285
Query: 120 ME-----EEVVPDHYTFPFVLKACAHTFSLCE--GKQVHAQLLKLGYES---DTRICNSL 169
+E + V P+ T + AC G+Q+HAQ++ G+E+ D R+ SL
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSL 345
Query: 170 IHFYATCGC-----------------------------LDMALKIFQNM-SEKSEVSWNV 199
+H YA+ G L+ A +F+ + S +VSW
Sbjct: 346 VHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTS 405
Query: 200 MVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACA------------------GL 241
M+D Y+ AG+ A FG KLHD DG T +IS GL
Sbjct: 406 MIDGYLEAGDVSRA---FGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGL 462
Query: 242 GALS---------------LGMWAHAY-VMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
L+ L H + V+ K D+++ LV MY KCG++E A
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 286 QQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH 345
++F +M +D SWNS+I+G S HG A+ AL+ F M+ K PNS+TF+GVLSAC+H
Sbjct: 523 YEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK-KPNSVTFLGVLSACSH 581
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWR 405
G++ GL F M + Y+++P ++HY ++DL RAG+++EA +S +P PD ++
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYG 641
Query: 406 SLLDACCK--QDASVE-LGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKL 462
+LL C +D E + E A ++ E++ V + +V L +YA R + +RK
Sbjct: 642 ALLGLCGLNWRDKDAEGIAERAAMRLLELD-PVNAPGHVALCNVYAGLGRHDMEKEMRKE 700
Query: 463 MSDKGVTKKPGCSLIEIDGVAHEFFAGDTT 492
M KGV K PGCS + ++G A+ F +GD +
Sbjct: 701 MGIKGVKKTPGCSWVVVNGRANVFLSGDKS 730
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 158/398 (39%), Gaps = 79/398 (19%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A LF + N WNTL+ R+ + + +A +++ AM D ++ ++K
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDME-KAKQVFDAM-------PSRDVVSWNAMIK 208
Query: 137 ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS 196
+ E K + + E + S+++ Y G + A ++F M E++ VS
Sbjct: 209 GYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS 264
Query: 197 WNVMVDSYVRAGEFDTALKVFGEMLKLHD---PDGYTMQSVISACAGLGA--LSLGMWAH 251
W M+ + + AL +F EM K D P+G T+ S+ AC GLG LG H
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH 324
Query: 252 AYVMKKCDKNVAADVLVNTCLVDMYC-----------------------------KCGSL 282
A V+ + V D + LV MY K G L
Sbjct: 325 AQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDL 384
Query: 283 EIAQQVFERM-PYRDVNSWNSIILGFSMHGKAEAALDYFFRM---------VKIEKFVPN 332
E A+ +FER+ D SW S+I G+ G A F ++ V I V N
Sbjct: 385 ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 333 SI---------------------TFVGVLSACNHRGMVNEGLMYFDMMTKEYNV-EPRLE 370
+ T+ +LS+ +++G ++ K +P L
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 371 HYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
LV ++A+ G I++A + ++M ++ D V W S++
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMI 541
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 127/297 (42%), Gaps = 32/297 (10%)
Query: 144 LCEGKQVHAQLL-----KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWN 198
L EG VHA+ L + G + SL+ YA G LD A +F+ M E++ V+ N
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 199 VMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKC 258
M+ YV+ + A +F EM K +V+S L AL + V +
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMPK----------NVVSWTVMLTALCDDGRSEDAV-ELF 161
Query: 259 DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALD 318
D+ +V+ LV + G +E A+QVF+ MP RDV SWN++I G+ + E A
Sbjct: 162 DEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 319 YFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDL 378
F M + N +T+ ++ G V E F M E + + ++
Sbjct: 222 LFGDMSE-----KNVVTWTSMVYGYCRYGDVREAYRLFCEMP-----ERNIVSWTAMISG 271
Query: 379 FARAGRIQEALNLVSEM-----PIKPDAVIWRSLLDACCKQDASV-ELGEEMAKQVF 429
FA +EAL L EM + P+ SL AC LGE++ QV
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVI 328
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 214/412 (51%), Gaps = 12/412 (2%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
YS L A RL+ + + +++ YA + + K L M+ + V
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA- 349
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
+L C + + G +H +K G + T + N LI Y+ ++ L +F+
Sbjct: 350 ---LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 188 NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALS 245
+ E +SWN ++ V++G TA +VF +M+ PD T+ S+++ C+ L L+
Sbjct: 407 QLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
LG H Y ++ N + V T L+DMY KCG+ A+ VF+ + +WNS+I
Sbjct: 467 LGKELHGYTLRN---NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G+S+ G AL + M + + P+ ITF+GVLSACNH G V+EG + F M KE+ +
Sbjct: 524 GYSLSGLQHRALSCYLEM-REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGI 582
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMA 425
P L+HY +V L RA EAL L+ +M IKPD+ +W +LL AC +E+GE +A
Sbjct: 583 SPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHR-ELEVGEYVA 641
Query: 426 KQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
+++F ++ G YVL+S LYA+ + W++V +R +M D G G S I
Sbjct: 642 RKMFMLDYKN-GGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 189/420 (45%), Gaps = 54/420 (12%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ + +L+ Y + A LF + ++ +WN LI Y+R+ + +K +
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYE----CDAWKLFI 140
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+M+++ P T +L C + +G+ VH K G E D+++ N+LI FY+ C
Sbjct: 141 VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
L A +F+ M +KS VSWN M+ +Y ++G + A+ VF M + + + T+ +++S
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
A L H V+ KC + D+ V T LV Y +CG L A++++
Sbjct: 261 AHVSHEPL------HCLVV-KC--GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDS 311
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL--- 353
+ SI+ ++ G + A+ YF + ++ + +++ VG+L C ++ G+
Sbjct: 312 IVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKI-DAVALVGILHGCKKSSHIDIGMSLH 370
Query: 354 --------------------MY--FD-----MMTKEYNVEPRLEHYGCLVDLFARAGRIQ 386
MY FD + E E L + ++ ++GR
Sbjct: 371 GYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAS 430
Query: 387 EALNLVSEMPIK----PDAVIWRSLLDACCKQDASVELGEEM----AKQVFEIEGSVCSG 438
A + +M + PDA+ SLL A C Q + LG+E+ + FE E VC+
Sbjct: 431 TAFEVFHQMMLTGGLLPDAITIASLL-AGCSQLCCLNLGKELHGYTLRNNFENENFVCTA 489
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 165/376 (43%), Gaps = 54/376 (14%)
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSL--CEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
++ + P+H+T L+A +F+ + +QV L K G + + SL++ Y
Sbjct: 39 LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKK 98
Query: 177 GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVI 235
GC+ A +F M E+ V WN ++ Y R G A K+F ML+ P T+ +++
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
C G +S G H K + D V L+ Y KC L A+ +F M +
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAK---SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK 215
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS-ITFVGVLSA-CNHR------- 346
SWN++I +S G E A+ F M EK V S +T + +LSA +H
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNM--FEKNVEISPVTIINLLSAHVSHEPLHCLVV 273
Query: 347 --GMVNEGLMYFDMMTKEYNVEPRLEHYGCLVD---LFARAGR--IQEALNLVS------ 393
GMVN+ ++T R GCLV L+A A + I ++VS
Sbjct: 274 KCGMVND----ISVVTSLVCAYSRC---GCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 394 -------------EMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAY 440
++ +K DAV +L CK+ + +++G M+ + I+ +C+
Sbjct: 327 DMDIAVVYFSKTRQLCMKIDAVALVGILHG-CKKSSHIDIG--MSLHGYAIKSGLCTKTL 383
Query: 441 VLLSKLYASASRWNEV 456
V ++ L S++++V
Sbjct: 384 V-VNGLITMYSKFDDV 398
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 223/447 (49%), Gaps = 46/447 (10%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L ++ +L+ YS + A LF + + W T+I R N +A+ Y M+
Sbjct: 239 LVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK-NQLDEALVYYTEML 297
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC- 176
+ P +L A A + +G Q+H ++K G++ + ++IHFYA
Sbjct: 298 ---RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 354
Query: 177 ------------------------------GCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
G ++ A ++F +K SWN M+ Y +
Sbjct: 355 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 414
Query: 207 AGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
+ AL +F EM+ PD TM SV SA + LG+L G AH Y+ +
Sbjct: 415 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS---TIPP 471
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVF---ERMPYRDVNSWNSIILGFSMHGKAEAALDYFF 321
+ + ++DMY KCGS+E A +F + + ++ WN+II G + HG A+ ALD +
Sbjct: 472 NDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYS 531
Query: 322 RMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFAR 381
+ + PNSITFVGVLSAC H G+V G YF+ M ++ +EP ++HYGC+VDL +
Sbjct: 532 DLQSL-PIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 590
Query: 382 AGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYV 441
AGR++EA ++ +MP+K D +IW LL A + +VE+ E A ++ I+ S G V
Sbjct: 591 AGRLEEAKEMIKKMPVKADVMIWGMLLSA-SRTHGNVEIAELAATELAAIDPSH-GGCKV 648
Query: 442 LLSKLYASASRWNEVGLLRKLMSDKGV 468
+LS +YA A RW +V L+R+ M + V
Sbjct: 649 MLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 187/443 (42%), Gaps = 103/443 (23%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A +LF + + + TLI+ YA++ N +A+EL++ M + ++ + T V+
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQN-NQWSEAMELFREMRNL---GIMLNEVTLATVIS 181
Query: 137 ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS 196
AC+H + + + + + +KL E + +L+H Y C CL A K+F M E++ V+
Sbjct: 182 ACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT 241
Query: 197 WNVMVDSYVRAG-------------------------------EFDTALKVFGEMLKLH- 224
WNVM++ Y +AG + D AL + EML+
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 225 DPDGYTMQSVISACAGLGALSLGMWAHAYVMKK---C----------------------- 258
P M ++SA A S G+ H ++K+ C
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 259 --DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAA 316
+ +V + L+ + K G +E A++VF++ +D+ SWN++I G++ + A
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 421
Query: 317 LDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLV 376
L F M+ + P++IT V V SA + G + EG D + + P ++
Sbjct: 422 LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAAII 480
Query: 377 DLFARAGRIQEALNL-------------------------------------VSEMPIKP 399
D++A+ G I+ ALN+ + +PIKP
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 400 DAVIWRSLLDACCKQDASVELGE 422
+++ + +L ACC VELG+
Sbjct: 541 NSITFVGVLSACC-HAGLVELGK 562
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 130/260 (50%), Gaps = 42/260 (16%)
Query: 135 LKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMA------------ 182
L +CA + + G+Q+H ++LK G +S+ ICNS+++ YA C L A
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 183 -------------------LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
LK+F M E+S VS+ ++ Y + ++ A+++F EM L
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 224 HDP-DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK-NVAADVLVNTCLVDMYCKCGS 281
+ T+ +VISAC+ LG G+W + K + V V+T L+ MYC C
Sbjct: 168 GIMLNEVTLATVISACSHLG----GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 282 LEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
L+ A+++F+ MP R++ +WN ++ G+S G E A + F ++ + + +++ ++
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE-----KDIVSWGTMID 278
Query: 342 ACNHRGMVNEGLMYFDMMTK 361
C + ++E L+Y+ M +
Sbjct: 279 GCLRKNQLDEALVYYTEMLR 298
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 226/434 (52%), Gaps = 18/434 (4%)
Query: 47 RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHK 106
R D+ P + S + + S D+ R+F +P+ WN ++ Y+ + H
Sbjct: 340 RMRDSGFQPNEVTCISVLGACFRS-GDVETGRRIFSSIPQPSVSAWNAMLSGYS-NYEHY 397
Query: 107 HQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRIC 166
+AI ++ M + + PD T +L +CA L GKQ+H +++ ++ I
Sbjct: 398 EEAISNFRQMQF---QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
Query: 167 NSLIHFYATCGCLDMALKIFQN-MSEKSEVSWNVMVDSYVRAGEFDT-ALKVFGEM--LK 222
+ LI Y+ C ++++ IF + ++E WN M+ + R DT AL +F M
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGF-RHNMLDTKALILFRRMHQTA 513
Query: 223 LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
+ P+ + +V+S+C+ L +L G H V+K +D V T L DMYCKCG +
Sbjct: 514 VLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS---GYVSDSFVETALTDMYCKCGEI 570
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI-EKFVPNSITFVGVLS 341
+ A+Q F+ + ++ WN +I G+ +G+ + A+ + +M+ EK P+ ITFV VL+
Sbjct: 571 DSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEK--PDGITFVSVLT 628
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDA 401
AC+H G+V GL M + + +EP L+HY C+VD RAGR+++A L P K +
Sbjct: 629 ACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSS 688
Query: 402 VIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRK 461
V+W LL + C+ V L +A+++ ++ S AYVLLS Y+S +W++ L+
Sbjct: 689 VLWEILLSS-CRVHGDVSLARRVAEKLMRLDPQ-SSAAYVLLSNTYSSLRQWDDSAALQG 746
Query: 462 LMSDKGVTKKPGCS 475
LM+ V K PG S
Sbjct: 747 LMNKNRVHKTPGQS 760
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 27/370 (7%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
++ ++ L + + DL A +F + + WN +I R + +A+ +YK M+
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKG-FEEKALVVYKRMV 130
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
+ +P +T VL AC+ G + H +K G + + + N+L+ YA CG
Sbjct: 131 C---DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 178 -CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVI 235
+D +++F+++S+ +EVS+ ++ R + A+++F M K D + +++
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 236 SACA---GLGALS------LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
S A G +LS LG H ++ D+ +N L+++Y K + A+
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRL---GFGGDLHLNNSLLEIYAKNKDMNGAE 304
Query: 287 QVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHR 346
+F MP +V SWN +I+GF +++ ++++ RM + F PN +T + VL AC
Sbjct: 305 LIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRM-RDSGFQPNEVTCISVLGACFRS 363
Query: 347 GMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVI 403
G V G F + +P + + ++ ++ +EA++ +M +KPD
Sbjct: 364 GDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 418
Query: 404 WRSLLDACCK 413
+L +C +
Sbjct: 419 LSVILSSCAR 428
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 112/289 (38%), Gaps = 87/289 (30%)
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
GK +H ++++G +SDT +CN L+ D Y+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLL-------------------------------DLYIE 53
Query: 207 AGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
G+ D A KVF EM DV
Sbjct: 54 CGDGDYARKVFDEM-----------------------------------------SVRDV 72
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI 326
+ CK G L A +VF+ MP RDV SWN++I G E AL + RMV
Sbjct: 73 YSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV-C 131
Query: 327 EKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY----GCLVDLFARA 382
+ F+P+ T VLSAC+ V +G+ F M V+ L+ L+ ++A+
Sbjct: 132 DGFLPSRFTLASVLSACSK---VLDGV--FGMRCHGVAVKTGLDKNIFVGNALLSMYAKC 186
Query: 383 GRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEI 431
G I + V E +P+ V + +++ +++ +E A Q+F +
Sbjct: 187 GFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLE-----AVQMFRL 230
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 248/484 (51%), Gaps = 54/484 (11%)
Query: 68 YSSLADLNYATRLFHHFGKPN-SFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVP 126
Y D++ A +F + N + WNTLI YA++ ++ +A++ M + MEE +
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNG-YEEEALK----MAVSMEENGLK 257
Query: 127 -DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM---- 181
D ++F VL + SL GK+VHA++LK G S+ + + ++ Y CG +
Sbjct: 258 WDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESA 317
Query: 182 ---------------------------ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
A ++F ++SEK+ V W M Y+ + D+ L
Sbjct: 318 HLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVL 377
Query: 215 KVFGEML--KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
++ + + + PD M SV+ AC+ + G H + ++ + D + T
Sbjct: 378 ELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLR---TGILMDKKLVTAF 434
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
VDMY KCG++E A+++F+ RD +N++I G + HG + +F M + F P+
Sbjct: 435 VDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE-GGFKPD 493
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
ITF+ +LSAC HRG+V EG YF M + YN+ P HY C++DL+ +A R+ +A+ L+
Sbjct: 494 EITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELM 553
Query: 393 SEM-PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+ ++ DAVI + L+A C + + EL +E+ +++ IEGS S Y+ ++ YAS+
Sbjct: 554 EGIDQVEKDAVILGAFLNA-CSWNKNTELVKEVEEKLLVIEGSNGS-RYIQIANAYASSG 611
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIY-------KFLN 504
RW+E+ +R M K + GCS ID H F + D +H ++E IY K L+
Sbjct: 612 RWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLS 671
Query: 505 EIDE 508
EIDE
Sbjct: 672 EIDE 675
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 224/554 (40%), Gaps = 119/554 (21%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFG-KPNSFMWNTLIRAYARSANHKHQAIELYKAM 116
++ ++ ++ Y ++ A LF + + +NTL+ +A++ + +AIE++ M
Sbjct: 54 VYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEM 113
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
++++ D +T ++K A ++ G+Q+H L+K G + +SLIH Y+ C
Sbjct: 114 HRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKC 173
Query: 177 GCLDMALKIFQNMSEK--SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP-------- 226
G IF + V+ N M+ +Y R G+ D AL VF +L+D
Sbjct: 174 GKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIA 233
Query: 227 -------------------------DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
D ++ +V++ + L +L +G HA V+K
Sbjct: 234 GYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK---NG 290
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGK--------- 312
++ V++ +VD+YCKCG+++ A+ + ++ S +S+I+G+S GK
Sbjct: 291 SYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFD 350
Query: 313 ----------------------AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN 350
++ L+ + E P+S+ V VL AC+ + +
Sbjct: 351 SLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYME 410
Query: 351 EG------------LM-------YFDMMTKEYNVE-------PRLEH----YGCLVDLFA 380
G LM + DM +K NVE E Y ++ A
Sbjct: 411 PGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCA 470
Query: 381 RAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEG-SVC 436
G ++ +M KPD + + +LL AC + +E GE+ K + E S
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLE-GEKYFKSMIEAYNISPE 529
Query: 437 SGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKS 496
+G Y + LY A R DK + G +E D V F + K+
Sbjct: 530 TGHYTCMIDLYGKAYRL-----------DKAIELMEGIDQVEKDAVILGAFLNACSWNKN 578
Query: 497 EDIYKFLNEIDEKL 510
++ K E++EKL
Sbjct: 579 TELVK---EVEEKL 589
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 247/491 (50%), Gaps = 51/491 (10%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
+++HL Q+HA+ + + + + A+ R+L S D +Y ++ GK + N
Sbjct: 34 SITHLFQVHARLITSGNFWDSSWAI----RLLKSSSRFGDSSYTVSIYRSIGK--LYCAN 87
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
+ +AY S++ K QA+ Y ++ VPD YTF ++ T + GK H Q
Sbjct: 88 PVFKAYLVSSSPK-QALGFY---FDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
+K G + + NSL+H Y CG LD+A K+F + ++ VSWN ++ VR G+ A
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 214 LKVFGEM---------------LKLHDPD------------GY-----TMQSVISACAGL 241
K+F EM L ++P G+ T+ +++AC
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 242 GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWN 301
L G HA +++ + + V+++T L+DMY KC + +A+++F+ + R+ +WN
Sbjct: 264 ARLKEGRSVHASLIRTF---LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWN 320
Query: 302 SIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK 361
+IL +HG+ E L+ F M+ P+ +TFVGVL C G+V++G Y+ +M
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMIN-GMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Query: 362 EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASV 418
E+ ++P H C+ +L++ AG +EA + +P + P++ W +LL + + +
Sbjct: 380 EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSS-SRFTGNP 438
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
LGE +AK + E + + Y LL +Y+ RW +V +R+++ ++ + + PGC L++
Sbjct: 439 TLGESIAKSLIETD-PLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVD 497
Query: 479 IDGVAHEFFAG 489
+ + H G
Sbjct: 498 LKEIVHGLRLG 508
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 237/473 (50%), Gaps = 47/473 (9%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A ++F + + +I + + + H +E +A ++ + P+ +TF V+
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRH----VEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 137 ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL----------------- 179
+ + + GKQ+H LK+G S+ + +++++ Y L
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 180 --------------DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK--L 223
+ AL +F+ M E+S V+WN ++ + + G + A+ F +ML+ +
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 224 HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLE 283
P+ T I+A + + + G HA +K K +V V L+ Y KCG++E
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF--NVFVWNSLISFYSKCGNME 279
Query: 284 IAQQVFERMP--YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
+ F ++ R++ SWNS+I G++ +G+ E A+ F +MVK PN++T +GVL
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEP---RLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
ACNH G++ EG MYF+ +Y+ +P LEHY C+VD+ +R+GR +EA L+ MP+
Sbjct: 340 ACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 399 PDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGL 458
P W++LL C+ ++ L + A ++ E++ S +YV+LS Y++ W V L
Sbjct: 399 PGIGFWKALLGG-CQIHSNKRLAKLAASKILELDPRDVS-SYVMLSNAYSAMENWQNVSL 456
Query: 459 LRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
+R+ M + G+ + GCS IE+ F D + +++Y+ L + + LE
Sbjct: 457 IRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 219/424 (51%), Gaps = 21/424 (4%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F + ++H+Y + A R+F + +WN L+ +Y + +A L K +M
Sbjct: 178 FPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG-MIDEAFGLLK-LMG 235
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+ D++TF +L AC + +GKQ+HA L K+ Y+ D + +L++ YA
Sbjct: 236 SDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISA 237
L A + F++M ++ VSWN M+ + + GE A+++FG+ML + PD T SV+S+
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVL-VNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
CA A+ W V K +AD L V L+ Y + G+L A F + D
Sbjct: 352 CAKFSAI----WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD 407
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
+ SW S+I + HG AE +L F M ++K P+ ITF+ VLSAC+H G+V EGL F
Sbjct: 408 LVSWTSVIGALASHGFAEESLQMFESM--LQKLQPDKITFLEVLSACSHGGLVQEGLRCF 465
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC--KQ 414
MT+ Y +E EHY CL+DL RAG I EA ++++ MP +P + C ++
Sbjct: 466 KRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEK 525
Query: 415 DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVT-KKPG 473
S++ G AK++ EIE + Y +LS Y S WN+ LLRK K PG
Sbjct: 526 RESMKWG---AKKLLEIEPTKPVN-YSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPG 581
Query: 474 CSLI 477
CS +
Sbjct: 582 CSWL 585
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 193/380 (50%), Gaps = 17/380 (4%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY-ARSANHKHQAIELYK 114
+LFL +++L Y+ + + + A +LF N WN LI R + H+A +
Sbjct: 69 NSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFC 128
Query: 115 AMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA 174
+ ++ +V DH +F +++ C + ++ G Q+H ++K G ES SL+HFY
Sbjct: 129 YLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYG 188
Query: 175 TCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA---LKVFGEMLKLHDPDGYTM 231
CG + A ++F+ + ++ V WN +V SYV G D A LK+ G D +T
Sbjct: 189 KCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTF 248
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
S++SAC + G HA + K + D+ V T L++MY K L A++ FE
Sbjct: 249 SSLLSAC----RIEQGKQIHAILFK---VSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
M R+V SWN++I+GF+ +G+ A+ F +M+ +E P+ +TF VLS+C + E
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML-LENLQPDELTFASVLSSCAKFSAIWE 360
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
M+TK+ + + L L+ ++R G + EAL L +PD V W S++ A
Sbjct: 361 IKQVQAMVTKKGSAD-FLSVANSLISSYSRNGNLSEAL-LCFHSIREPDLVSWTSVIGAL 418
Query: 412 CKQ---DASVELGEEMAKQV 428
+ S+++ E M +++
Sbjct: 419 ASHGFAEESLQMFESMLQKL 438
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 143/322 (44%), Gaps = 47/322 (14%)
Query: 144 LCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDS 203
L + KQ H ++K G + + N L+ Y D A K+F M ++ V+WN+++
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 204 YV-RAGEFDTALKV---FGEMLKLHDP--DGYTMQSVISACAGLGALSLGMWAHAYVMKK 257
+ R G+ + + + + D D + +I C + G+ H ++K
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVK- 170
Query: 258 CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAAL 317
+ + + +T LV Y KCG + A++VFE + RD+ WN+++ + ++G +
Sbjct: 171 --QGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG----MI 224
Query: 318 DYFFRMVKI-----EKFVPNSITFVGVLSACN-HRGMVNEGLMY-----FDM--MTKEYN 364
D F ++K+ +F + TF +LSAC +G +++ FD+ T N
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLN 284
Query: 365 VEPRLEH------------------YGCLVDLFARAGRIQEALNLVSEM---PIKPDAVI 403
+ + H + ++ FA+ G +EA+ L +M ++PD +
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 404 WRSLLDACCKQDASVELGEEMA 425
+ S+L +C K A E+ + A
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQA 366
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 207/415 (49%), Gaps = 45/415 (10%)
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVP-DHYTFPFVLKACAHTFSLCEGKQVHAQL 154
+ +YA NH+ QA+ L+ + M +P D + F LK+CA F G VHA
Sbjct: 19 LSSYANQGNHE-QALNLF---LQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHS 74
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+K + S+ + +L+ Y C + A K+F + +++ V WN M+ Y G+ A+
Sbjct: 75 VKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAV 134
Query: 215 KVFGEMLKLHD----------------------------------PDGYTMQSVISACAG 240
+++ M + + P+ T+ +++SAC+
Sbjct: 135 ELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSA 194
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
+GA L H+Y + + + + LV+ Y +CGS+ Q VF+ M RDV +W
Sbjct: 195 IGAFRLIKEIHSYAFRNL---IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
+S+I +++HG AE+AL F M ++ K P+ I F+ VL AC+H G+ +E L+YF M
Sbjct: 252 SSLISAYALHGDAESALKTFQEM-ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
+Y + +HY CLVD+ +R GR +EA ++ MP KP A W +LL A C+ +EL
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGA-CRNYGEIEL 369
Query: 421 GEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
E A+++ +E + YVLL K+Y S R E LR M + GV PG S
Sbjct: 370 AEIAARELLMVEPENPAN-YVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 144/331 (43%), Gaps = 41/331 (12%)
Query: 41 IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYA 100
+HA ++++ +N F+ +L Y +++A +LF + N+ +WN +I Y
Sbjct: 70 VHAHSVKSNFLSNP----FVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 101 RSANHKHQAIELYKAMMLMMEEEVV------------------------------PDHYT 130
K +A+ELY+AM +M E P+ T
Sbjct: 126 HCGKVK-EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLIT 184
Query: 131 FPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
++ AC+ + K++H+ + E ++ + L+ Y CG + +F +M
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME 244
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMW 249
++ V+W+ ++ +Y G+ ++ALK F EM L PD +V+ AC+ G L
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG---LADE 301
Query: 250 AHAYVMK-KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV-NSWNSIILGF 307
A Y + + D + A +CLVD+ + G E A +V + MP + +W +++
Sbjct: 302 ALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Query: 308 SMHGKAEAALDYFFRMVKIEKFVPNSITFVG 338
+G+ E A ++ +E P + +G
Sbjct: 362 RNYGEIELAEIAARELLMVEPENPANYVLLG 392
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 57/259 (22%)
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP-----DGYTMQSVISACAGLGALSLGMW 249
+S + SY G + AL +F L++H D + + +CA LG
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLF---LQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSM 309
HA+ +K N ++ V L+DMY KC S+ A+++F+ +P R+ WN++I ++
Sbjct: 70 VHAHSVKS---NFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 310 HGKAEAALDY--------------------------------FFRMVKIEKFVPNSITFV 337
GK + A++ F+R + +F PN IT +
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYN------VEPRLEHYGCLVDLFARAGRIQEALNL 391
++SAC+ G F ++ + ++ +EP + LV+ + R G I + L
Sbjct: 187 ALVSACSAIGA-------FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIV-YVQL 238
Query: 392 VSEMPIKPDAVIWRSLLDA 410
V + D V W SL+ A
Sbjct: 239 VFDSMEDRDVVAWSSLISA 257
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 236/513 (46%), Gaps = 72/513 (14%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
S ++H Y + + A LF + N W +I Y + A L+ + + E
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFK-AGFFEDGFGLF--LRMRQE 268
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL-------------------KLGY--- 159
+V + T + KAC EG Q+H + KLGY
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 160 ---------ESDTRICNSLI-------------------------------HFYATCGCL 179
D+ NSLI ++ G +
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEI 388
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISAC 238
+++F M EK ++W M+ ++V G ++ AL F +ML+ P+ YT SV+SA
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 239 AGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN 298
A L L G+ H V+K N+ D+ V LV MYCKCG+ A ++F + ++
Sbjct: 449 ASLADLIEGLQIHGRVVKM---NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
S+N++I G+S +G + AL F M++ PN +TF+ +LSAC H G V+ G YF
Sbjct: 506 SYNTMISGYSYNGFGKKALK-LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
M YN+EP +HY C+VDL R+G + +A NL+S MP KP + +W SLL A K V
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA-SKTHLRV 623
Query: 419 ELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
+L E AK++ E+E + YV+LS+LY+ + + + + K + K PG S I
Sbjct: 624 DLAELAAKKLIELEPDSAT-PYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWII 682
Query: 479 IDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLE 511
+ G H F AGD + E+I L I +++E
Sbjct: 683 LKGEVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 30/344 (8%)
Query: 73 DLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFP 132
DL A LF + N+ + T+I + R A +A LY + + V +
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVR-AGRFDEAEFLYAETPVKFRDSVASNVLLSG 186
Query: 133 FVLKACAHTFSLCEGKQVHAQLLKLGYESDTRI-CNSLIHFYATCGCLDMALKIFQNMSE 191
+ L GK A + G + C+S++H Y G + A +F M+E
Sbjct: 187 Y----------LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 192 KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMW 249
++ ++W M+D Y +AG F+ +F M + D + T+ + AC G
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSM 309
H V + + D+ + L+ MY K G + A+ VF M +D SWNS+I G
Sbjct: 297 IHGLVSR---MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 310 HGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRL 369
+ A + F +M + +++ ++ + +G +++ + F MM ++ N+
Sbjct: 354 RKQISEAYELFEKMPG-----KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT--- 405
Query: 370 EHYGCLVDLFARAGRIQEALNLVSEMPIK---PDAVIWRSLLDA 410
+ ++ F G +EAL +M K P++ + S+L A
Sbjct: 406 --WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 162/396 (40%), Gaps = 57/396 (14%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMW 92
+ +S+ + I +T ++TT A+F + + ++ +L A +F + W
Sbjct: 25 LAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSW 84
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
+I AYA + ++ KA + E +P T + A + C+
Sbjct: 85 IAMISAYAENG-------KMSKAWQVFDE---MPVRVTTSYNAMITAMIKNKCD------ 128
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT 212
L A ++F ++ EK+ VS+ M+ +VRAG FD
Sbjct: 129 --------------------------LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDE 162
Query: 213 ALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
A ++ E +K D SV S G L G W A ++ +V+ +
Sbjct: 163 AEFLYAETPVKFRD-------SVASNVLLSGYLRAGKWNEA--VRVFQGMAVKEVVSCSS 213
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
+V YCK G + A+ +F+RM R+V +W ++I G+ G E F RM +
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
NS T + AC EG ++++ +E L L+ ++++ G + EA +
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSR-MPLEFDLFLGNSLMSMYSKLGYMGEAKAV 332
Query: 392 VSEMPIKPDAVIWRSLLDACCKQ---DASVELGEEM 424
M K D+V W SL+ ++ + EL E+M
Sbjct: 333 FGVMKNK-DSVSWNSLITGLVQRKQISEAYELFEKM 367
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 220/417 (52%), Gaps = 18/417 (4%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
+ + +Y DL A ++F + N+ W L+ AY +S +E K+M +M
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE-----LEEAKSMFDLMP 203
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
E + ++ ++ + L K++ ++ K S T S+I YA G +
Sbjct: 204 ERNLG---SWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYT----SMIDGYAKGGDMVS 256
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAG 240
A +F+ +W+ ++ Y + G+ + A KVF EM K PD + M ++SAC+
Sbjct: 257 ARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQ 316
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
+G L +Y+ ++ +K + V+ L+DM KCG ++ A ++FE MP RD+ S+
Sbjct: 317 MGCFELCEKVDSYLHQRMNKFSSHYVV--PALIDMNAKCGHMDRAAKLFEEMPQRDLVSY 374
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
S++ G ++HG A+ F +MV E VP+ + F +L C +V EGL YF++M
Sbjct: 375 CSMMEGMAIHGCGSEAIRLFEKMVD-EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMR 433
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
K+Y++ +HY C+V+L +R G+++EA L+ MP + A W SLL C + E+
Sbjct: 434 KKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLH-GNTEI 492
Query: 421 GEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
E +A+ +FE+E +G+YVLLS +YA+ RW +V LR M++ G+TK G S I
Sbjct: 493 AEVVARHLFELEPQ-SAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 182/380 (47%), Gaps = 30/380 (7%)
Query: 37 HLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLI 96
HL QIHA+ +R Q L SS + L+Y++ +F P +++WN LI
Sbjct: 25 HLNQIHARIIRK--GLEQDQNLISIFISSSSSSSSS-LSYSSSVFERVPSPGTYLWNHLI 81
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVV-PDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
+ Y+ +K E +M MM + PD YTFP V+K C++ + G VH +L
Sbjct: 82 KGYS----NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVL 137
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
++G++ D + S + FY C L A K+F M E++ VSW +V +YV++GE + A
Sbjct: 138 RIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKS 197
Query: 216 VFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
+F M + + + +++ G L K D+ D++ T ++D
Sbjct: 198 MFDLM---PERNLGSWNALVDGLVKSGDL-------VNAKKLFDEMPKRDIISYTSMIDG 247
Query: 276 YCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
Y K G + A+ +FE DV +W+++ILG++ +G+ A F M + P+
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA-KNVKPDEFI 306
Query: 336 FVGVLSACNHRG---MVNEGLMYFDMMTKEYNVEPRLEHY--GCLVDLFARAGRIQEALN 390
VG++SAC+ G + + Y +++ HY L+D+ A+ G + A
Sbjct: 307 MVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALIDMNAKCGHMDRAAK 361
Query: 391 LVSEMPIKPDAVIWRSLLDA 410
L EMP + D V + S+++
Sbjct: 362 LFEEMPQR-DLVSYCSMMEG 380
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 227/424 (53%), Gaps = 16/424 (3%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKP-NSFMWNTLIRAYARSANHKHQAIELYKAMML 118
L + ++H+Y ++ A ++F + ++ ++TL+ Y + + K A++L++ +
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ-VSKKALALDLFR---I 217
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M + EVV + T L A + L + H +K+G + D + +LI Y G
Sbjct: 218 MRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISA 237
+ A +IF K V+WN M+D Y + G + + + +M + P+ T ++S+
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
CA A +G + ++ +A D ++ T LVDMY K G LE A ++F RM +DV
Sbjct: 338 CAYSEAAFVGRTVADLLE---EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDV 394
Query: 298 NSWNSIILGFSMHGKAEAALDYFFRMVKIE-KFVPNSITFVGVLSACNHRGMVNEGLMYF 356
SW ++I G+ HG A A+ F +M + K PN ITF+ VL+AC+H G+V EG+ F
Sbjct: 395 KSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCF 454
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDA 416
M + Y+ P++EHYGC+VDL RAG+++EA L+ +PI D+ WR+LL A C+
Sbjct: 455 KRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALL-AACRVYG 513
Query: 417 SVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
+ +LGE + ++ E+ G +LL+ +A A E L +L +KG K+ G S
Sbjct: 514 NADLGESVMMRLAEM-GETHPADAILLAGTHAVAGN-PEKSLDNEL--NKG-RKEAGYSA 568
Query: 477 IEID 480
IEI+
Sbjct: 569 IEIE 572
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 186/354 (52%), Gaps = 13/354 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F S++L + SS+ D+ YA+ +F H N FM+NT+IR Y+ S + +A ++ +
Sbjct: 61 FAVSKLLAF-SSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSIS-DEPERAFSVFNQLR- 117
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+ + D ++F LK+C+ + G+ +H L+ G+ T + N+LIHFY CG
Sbjct: 118 --AKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGK 175
Query: 179 LDMALKIFQNMSEKSE-VSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVIS 236
+ A K+F M + + V+++ +++ Y++ + AL +F M K + T+ S +S
Sbjct: 176 ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD 296
A + LG LS AH +K + D+ + T L+ MY K G + A+++F+ +D
Sbjct: 236 AISDLGDLSGAESAHVLCIK---IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKD 292
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V +WN +I ++ G E + + R +K EK PNS TFVG+LS+C + G
Sbjct: 293 VVTWNCMIDQYAKTGLLEECV-WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
D++ +E + LVD++A+ G +++A+ + + M K D W +++
Sbjct: 352 DLLEEERIALDAILGTA-LVDMYAKVGLLEKAVEIFNRMKDK-DVKSWTAMISG 403
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 132/286 (46%), Gaps = 11/286 (3%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
L L + ++ Y ++ A R+F + + WN +I YA++ + + L + M
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTG-LLEECVWLLRQMK 320
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
E++ P+ TF +L +CA++ + G+ V L + D + +L+ YA G
Sbjct: 321 Y---EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVG 377
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH---DPDGYTMQSV 234
L+ A++IF M +K SW M+ Y G A+ +F +M + + P+ T V
Sbjct: 378 LLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVV 437
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
++AC+ G + G+ +++ + V C+VD+ + G LE A ++ +P
Sbjct: 438 LNACSHGGLVMEGIRCFKRMVEA--YSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI 495
Query: 295 -RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP-NSITFVG 338
D +W +++ ++G A+ R+ ++ + P ++I G
Sbjct: 496 TSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAG 541
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 208/388 (53%), Gaps = 10/388 (2%)
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN++I A S +H +++ ++AM E ++ D T + A + + +G+ H
Sbjct: 548 WNSVISGCASSGHHL-ESLRAFQAMS--REGKIRHDLITLLGTISASGNLGLVLQGRCFH 604
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
+K E DT++ N+LI Y C ++ A+K+F +S+ + SWN ++ + +
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 212 TALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
++F LKL +P+ T ++SA LG+ S GM AH +++++ A+ V+
Sbjct: 665 EVFQLF-RNLKL-EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR---GFQANPFVSAA 719
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
LVDMY CG LE +VF +++WNS+I HG E A++ F + + P
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
N +F+ +LSAC+H G ++EGL Y+ M +++ V+P EH +VD+ RAG+++EA
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 839
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
++ + A +W +LL A C +LG+E+A+ +FE+E S Y+ L+ Y
Sbjct: 840 ITGIGEPQKAGVWGALLSA-CNYHGDTKLGKEVAEVLFEMEPDNAS-YYISLANTYVGLG 897
Query: 452 RWNEVGLLRKLMSDKGVTKKPGCSLIEI 479
W E LRK++ D + K PG S+I++
Sbjct: 898 GWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 161/356 (45%), Gaps = 7/356 (1%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
Q L S++L +Y +L ++ LF + + +WN++I A ++ + A+ L+
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYI-AAVGLFIE 178
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M+ E D T A + + +H ++ G D+ +CN+L++ YA
Sbjct: 179 MIHKGNE---FDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAK 235
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSV 234
L A +F +M + VSWN ++ + G +L+ F M + D T V
Sbjct: 236 GENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCV 295
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
ISAC+ + L+LG H V+K + A V V ++ MY KCG E A+ VFE +
Sbjct: 296 ISACSSIEELTLGESLHGLVIKS-GYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
RDV S N+I+ GF+ +G E A +M ++K P+ T V + S C EG
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+ LE ++D++ + G +A L+ + D V W S++ A
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISA 469
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 178/399 (44%), Gaps = 37/399 (9%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L + +++ Y+ +L+ A +F H + WNT I + H ++++ +K+M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNT-IMTKCLANGHPRKSLQYFKSMTGS 283
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY--ESDTRICNSLIHFYATCG 177
+E D TF V+ AC+ L G+ +H ++K GY E+ + NS+I Y+ CG
Sbjct: 284 GQE---ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 178 CLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH--DPDGYTMQSVI 235
+ A +F+ + + +S N +++ + G F+ A + +M + PD T+ S+
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
S C L G H Y ++ ++ A +V+ ++DMY KCG A+ +F+ +R
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVI--NSVIDMYGKCGLTTQAELLFKTTTHR 458
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMV---KIEKFVPNSITFVGVLSACNHRGMVNEG 352
D+ SWNS+I FS +G A + F +V KF + T + +L++C+
Sbjct: 459 DLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS--TVLAILTSCDSS------ 510
Query: 353 LMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC 412
D + +V L+ G L F R + E +L S W S++ C
Sbjct: 511 ----DSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTS----------WNSVISGCA 556
Query: 413 KQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+E A Q EG + LL + AS +
Sbjct: 557 SSGHHLE--SLRAFQAMSREGKIRHDLITLLGTISASGN 593
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 150/361 (41%), Gaps = 30/361 (8%)
Query: 64 ILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE 123
I+ YS D A +F + N ++ +A + + +A + M + ++
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFE-EAFGILNQMQSV--DK 388
Query: 124 VVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDT-RICNSLIHFYATCGCLDMA 182
+ PD T + C EG+ VH +++ +S + NS+I Y CG A
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVI---SACA 239
+F+ + + VSWN M+ ++ + G A +F E++ + +++ +V+ ++C
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD 508
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
+L G H ++ K L D+ LE + RD+ S
Sbjct: 509 SSDSLIFGKSVHCWLQK---------------LGDLTSAFLRLETMSET------RDLTS 547
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
WNS+I G + G +L F M + K + IT +G +SA + G+V +G + +
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA 607
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
K E + L+ ++ R I+ A+ + + P+ W ++ A + A E
Sbjct: 608 IKSLR-ELDTQLQNTLITMYGRCKDIESAVKVFGLIS-DPNLCSWNCVISALSQNKAGRE 665
Query: 420 L 420
+
Sbjct: 666 V 666
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 129/274 (47%), Gaps = 19/274 (6%)
Query: 44 QTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSA 103
++LR +DT L + ++ Y D+ A ++F PN WN +I A +++
Sbjct: 609 KSLRELDTQ-------LQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 104 NHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDT 163
+ + +L++ + L P+ TF +L A S G Q H L++ G++++
Sbjct: 662 AGR-EVFQLFRNLKLE------PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP 714
Query: 164 RICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
+ +L+ Y++CG L+ +K+F+N S +WN ++ ++ G + A+++F E+
Sbjct: 715 FVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSN 774
Query: 224 H--DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGS 281
+P+ + S++SAC+ G + G+ + + +K + V +VDM + G
Sbjct: 775 SEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRV--WIVDMLGRAGK 832
Query: 282 LEIAQQVFERMPY-RDVNSWNSIILGFSMHGKAE 314
L A + + + W +++ + HG +
Sbjct: 833 LREAYEFITGIGEPQKAGVWGALLSACNYHGDTK 866
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
+ VH LK G D + L+ FY G L + +F + EK + WN M+ + +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 208 GEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
G + A+ +F EM+ K ++ D T+ SA + L H + + + D
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI---ETGLVGDS 223
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI 326
+ L+++Y K +L A+ VF M +RD+ SWN+I+ +G +L YF M
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 327 EKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE-YNVEPRLEHYGCLVDLFARAGRI 385
+ +++TF V+SAC+ + G ++ K Y+ E + ++ ++++ G
Sbjct: 284 GQ-EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDA 410
+ A + E+ + D + ++L+
Sbjct: 343 EAAETVFEELVCR-DVISSNAILNG 366
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 191/346 (55%), Gaps = 21/346 (6%)
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
D+ N L++MY CG A VFE+M +++ +W II F+ +G E A+D F R
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF- 346
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
K E +P+ F G+ AC G V+EGL++F+ M+++Y + P +E Y LV+++A G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 385 IQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLS 444
+ EAL V MP++P+ +W +L++ + ++ELG+ A+ V ++ +
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMN-LSRVHGNLELGDYCAEVV----------EFLDPT 455
Query: 445 KLYASASRWNEVGLLRKLMSD--KGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKF 502
+L ++ + G + SD K KK L + EF AGDT P+++++++
Sbjct: 456 RL----NKQSREGFIPVKASDVEKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQL 511
Query: 503 LNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVF 561
L + + +GY+ + A H +D+ + K++ L HSER+A A +LNS P P V
Sbjct: 512 LRNLKMHMVEVGYVAETRMALHDIDQ--ESKETLLLGHSERIAFARAVLNSAPRKPFTVI 569
Query: 562 KNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
KNLRVC DCH K++S I E+I RD RFH K+G C+C DYW
Sbjct: 570 KNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 136 KACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEV 195
K C L E K VH ++ D + L+ Y+ CG + A +F+ MSEK+
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYV 254
+W +++ + + G + A+ +F + + PDG + + AC LG + G+ H
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL-HFES 380
Query: 255 MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKA 313
M + D +A + LV+MY G L+ A + ERMP +V+ W +++ +HG
Sbjct: 381 MSR-DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 314 EAALDYFFRMVK 325
E DY +V+
Sbjct: 440 ELG-DYCAEVVE 450
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 230/459 (50%), Gaps = 16/459 (3%)
Query: 32 IITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFM 91
+ + H +QIH I + L +++ ++ Y L +YA +F +
Sbjct: 146 VTCVRHGEQIHGNA---ICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
WN LI + + S N K A++ + LM E E+ PD YT V+ C+ L +GKQ
Sbjct: 203 WNCLILSCSDSGN-KEVALDQF---WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
A +K+G+ S++ + + I ++ C LD ++K+F+ + + V N M+ SY +
Sbjct: 259 ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE 318
Query: 212 TALKVFG-EMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNT 270
AL++F M + PD +T SV+S+ + L G H+ V+K D V T
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKL---GFDLDTAVAT 374
Query: 271 CLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
L++MY K GS+++A VF + +D+ WN++I+G + + +A +L F +++ +
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 331 PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
P+ +T +G+L AC + G VNEG+ F M K + V P EHY C+++L R G I EA +
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 391 LVSEMPIKPDAVIWRSLLDACCKQD-ASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
+ ++P +P + IW +L C D L E +AK + E E S Y++L K+Y
Sbjct: 495 IADKIPFEPSSHIWEPIL--CASLDLGDTRLAETVAKTMLESEPK-SSFPYLVLIKIYEM 551
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFA 488
RW LR M++ + G S I I+ F A
Sbjct: 552 TWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 159/351 (45%), Gaps = 22/351 (6%)
Query: 74 LNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPF 133
LN A LF + + WNT+I H++ + M E+ P +TF
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG----IRVFFDMQRWEIRPTEFTFSI 141
Query: 134 V--LKACAHTFSLCEGKQVHAQLLKLGYES-DTRICNSLIHFYATCGCLDMALKIFQNMS 190
+ L C G+Q+H + G + + NS++ Y G D AL +F M
Sbjct: 142 LASLVTCVR-----HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMW 249
++ VSWN ++ S +G + AL F M ++ PD YT+ V+S C+ L LS G
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSM 309
A A +K ++ +V +DM+ KC L+ + ++F + D NS+I +S
Sbjct: 257 ALALCIK---MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSW 313
Query: 310 HGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTK-EYNVEPR 368
H E AL F + + P+ TF VLS+ N M++ G ++ K ++++
Sbjct: 314 HCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTA 371
Query: 369 LEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ L++++ + G + A+ + ++ K D + W +++ + +VE
Sbjct: 372 VAT--SLMEMYFKTGSVDLAMGVFAKTDGK-DLIFWNTVIMGLARNSRAVE 419
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 44/306 (14%)
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGC---------------------------- 178
K VHAQLL+ G+ T N + Y G
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 179 ---LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSV 234
L+ AL +F M E+ VSWN M+ V G + ++VF +M + P +T +
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
S + + G H + C +++V ++DMY + G + A VF M
Sbjct: 143 ASL---VTCVRHGEQIHGNAI--CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
RDV SWN +IL S G E ALD F+ M ++E P+ T V+S C+ +++G
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREME-IQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA---- 410
+ K + + G +D+F++ R+ +++ L E+ K D+V+ S++ +
Sbjct: 257 ALALCIKMGFLSNSIV-LGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
Query: 411 CCKQDA 416
CC +DA
Sbjct: 315 CCGEDA 320
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 250/516 (48%), Gaps = 62/516 (12%)
Query: 50 DTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQA 109
D + + + ++ ++ Y L+ A LF + N WNT+I YA+S +A
Sbjct: 101 DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSG-RIDKA 159
Query: 110 IELYKAM------------------------MLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
+EL+ M M + E D ++ ++ A +
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVD 219
Query: 146 EGKQ----------VHAQLLKLGYESDTRI-----------------CNSLIHFYATCGC 178
E ++ + + GY + RI N++I +
Sbjct: 220 EARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVIS 236
++ A +F M EK+ +SW M+ YV E + AL VF +ML+ P+ T S++S
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 237 ACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER--MPY 294
AC+ L L G H + K + + +V + L++MY K G L A+++F+ +
Sbjct: 340 ACSDLAGLVEGQQIHQLISKSVHQK---NEIVTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 295 RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLM 354
RD+ SWNS+I ++ HG + A++ + +M K F P+++T++ +L AC+H G+V +G+
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRK-HGFKPSAVTYLNLLFACSHAGLVEKGME 455
Query: 355 YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
+F + ++ ++ R EHY CLVDL RAGR+++ N ++ + + ++L AC
Sbjct: 456 FFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVH 515
Query: 415 DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGC 474
+ V + +E+ K+V E GS +G YVL+S +YA+ + E +R M +KG+ K+PGC
Sbjct: 516 N-EVSIAKEVVKKVLET-GSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGC 573
Query: 475 SLIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKL 510
S +++ H F GD +HP+ E + L+++ K+
Sbjct: 574 SWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKM 609
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 20/240 (8%)
Query: 169 LIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDG 228
LI G + A K+F + E+ V+W ++ Y++ G+ A ++F + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 229 YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV 288
+T +++S LS+ A + ++NV V NT ++D Y + G ++ A ++
Sbjct: 112 WT--AMVSGYLRSKQLSI---AEMLFQEMPERNV---VSWNT-MIDGYAQSGRIDKALEL 162
Query: 289 FERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGM 348
F+ MP R++ SWNS++ G+ + A++ F RM + + +++ ++ G
Sbjct: 163 FDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR-----RDVVSWTAMVDGLAKNGK 217
Query: 349 VNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
V+E FD M E + + ++ +A+ RI EA L MP + D W +++
Sbjct: 218 VDEARRLFDCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMPER-DFASWNTMI 271
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
L+ CK G + A+++F+ +P RDV +W +I G+ G A + F R+ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---- 107
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
N +T+ ++S ++ M F M E + + ++D +A++GRI +AL L
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMP-----ERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 392 VSEMPIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQ 427
EMP + + V W S++ A ++ D ++ L E M ++
Sbjct: 163 FDEMPER-NIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 233/428 (54%), Gaps = 36/428 (8%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMM 120
++ +LH Y +L+ A R+F + ++ WN +I +YA+ + + A L+ AM
Sbjct: 173 WNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGN-ACSLFSAM---- 227
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY-------ESDTRICNSLIHFY 173
LK+ A ++++ G V+ + +KL + + ++I Y
Sbjct: 228 -------------PLKSPA-SWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGY 273
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH---DPDGYT 230
G + A ++F+ MS+K ++ ++ M+ Y + G+ ALK+F +ML+ + PD T
Sbjct: 274 TKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEIT 333
Query: 231 MQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFE 290
+ SV+SA + LG S G W +Y+ + + D L++T L+D+Y K G A ++F
Sbjct: 334 LSSVVSANSQLGNTSFGTWVESYI---TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFS 390
Query: 291 RMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN 350
+ +D S++++I+G ++G A A F M++ +K PN +TF G+LSA +H G+V
Sbjct: 391 NLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE-KKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 351 EGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
EG F+ M K++N+EP +HYG +VD+ RAGR++EA L+ MP++P+A +W +LL A
Sbjct: 450 EGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLA 508
Query: 411 CCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTK 470
+ +VE GE ++E + +G L+ +Y+S RW++ +R + +K + K
Sbjct: 509 SGLHN-NVEFGEIACSHCVKLE-TDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCK 566
Query: 471 KPGCSLIE 478
GCS +E
Sbjct: 567 TLGCSWVE 574
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 193/406 (47%), Gaps = 39/406 (9%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLAD--LNYATRLFHHFGKPNSF 90
+ + KQ+HAQ + ++ NH + + ++ + LH+ + + Y R+ F +SF
Sbjct: 14 VVLEQAKQVHAQLV--VNRYNHLEPILVH-QTLHFTKEFSRNIVTYVKRILKGFNGHDSF 70
Query: 91 MWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQV 150
W L+R ++ K + +++Y + M + P + VL+AC ++ +GK +
Sbjct: 71 SWGCLVRFLSQHRKFK-ETVDVY---IDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 151 HAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEF 210
HAQ LK G + L+ Y+ G +++A K F +++EK+ VSWN ++ Y+ +GE
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 211 DTALKVFGEMLKLHDPDGYTMQSVIS----------ACAGLGALSL----------GMWA 250
D A +VF K+ + D + +IS AC+ A+ L G +
Sbjct: 187 DEARRVFD---KIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 251 HAYVMKKC----DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILG 306
+ MK D + + ++ Y K G ++ A+++F M +D ++++I
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 307 FSMHGKAEAALDYFFRMVKIEKFV-PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
++ +GK + AL F +M++ ++ P+ IT V+SA + G + G + + E+ +
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGI 362
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
+ L+DL+ + G +A + S + K D V + +++ C
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGC 407
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 218/431 (50%), Gaps = 48/431 (11%)
Query: 90 FMWNTLIRAYARSANHKHQAI---ELYKAMMLMMEEEVVP--DHYTFPFVLKACAHTF-- 142
F++N L+R Y+ H +L + L + +P D +T+ F+LKA ++
Sbjct: 78 FLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFP 137
Query: 143 SLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVD 202
SL G +H LKLG+ES + +L+ Y G + A K+F M E++ V+WNVM+
Sbjct: 138 SLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMIT 197
Query: 203 SYVRAGEFDTAL-------------------------------KVFGEMLKLH--DPDGY 229
G+F+ AL +F M+ P+
Sbjct: 198 GLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEI 257
Query: 230 TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVF 289
T+ +++ A LG L + HAYV K+ V D+ V L+D Y KCG ++ A + F
Sbjct: 258 TILAILPAVWNLGDLKMCGSVHAYVGKR--GFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 315
Query: 290 ERMP--YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
+P +++ SW ++I F++HG + A+ F M ++ PN +T + VL+AC+H G
Sbjct: 316 IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERL-GLKPNRVTMISVLNACSHGG 374
Query: 348 MVNEGLM-YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRS 406
+ E + +F+ M EY + P ++HYGCLVD+ R GR++EA + E+PI+ AV+WR
Sbjct: 375 LAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRM 434
Query: 407 LLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDK 466
LL AC D EL E + +++ E+E S G YVL+S ++ R+ + RK M +
Sbjct: 435 LLGACSVYD-DAELAERVTRKLMELERS-HGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Query: 467 GVTKKPGCSLI 477
GV K PG S +
Sbjct: 493 GVAKLPGHSQV 503
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 9/265 (3%)
Query: 69 SSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDH 128
++L D A W T+I YAR K +AI L+ M+ + + P+
Sbjct: 200 TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPK-EAILLFSRMVAC--DAIKPNE 256
Query: 129 YTFPFVLKACAHTFSLCEGKQVHAQLLKLGY-ESDTRICNSLIHFYATCGCLDMALKIFQ 187
T +L A + L VHA + K G+ D R+ NSLI YA CGC+ A K F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 188 NM--SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGAL 244
+ K+ VSW M+ ++ G A+ +F +M +L P+ TM SV++AC+ G L
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH-GGL 375
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD-VNSWNSI 303
+ + + + + DV CLVDM + G LE A+++ +P + W +
Sbjct: 376 AEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRML 435
Query: 304 ILGFSMHGKAEAALDYFFRMVKIEK 328
+ S++ AE A +++++E+
Sbjct: 436 LGACSVYDDAELAERVTRKLMELER 460
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 219/443 (49%), Gaps = 18/443 (4%)
Query: 40 QIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
QIH +++ N L + S +L Y+ + A F + + WN +I Y
Sbjct: 134 QIHG----SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGY 189
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
+A A + LM+ E PD +TF +L+A L ++H +KLG+
Sbjct: 190 TANAC----ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGF 245
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDT-ALKVFG 218
+ + SL++ Y CG L A K+ + ++ +S ++ + + + A +F
Sbjct: 246 GRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFK 305
Query: 219 EMLKLHDP-DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
+M+++ D + S++ C + ++++G H + +K + DV + L+DMY
Sbjct: 306 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALK--SSQIRFDVALGNSLIDMYA 363
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
K G +E A FE M +DV SW S+I G+ HG E A+D + RM + E+ PN +TF+
Sbjct: 364 KSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM-EHERIKPNDVTFL 422
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV--SEM 395
+LSAC+H G G +D M ++ +E R EH C++D+ AR+G ++EA L+ E
Sbjct: 423 SLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEG 482
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNE 455
+ + W + LDA C++ +V+L + A Q+ +E Y+ L+ +YA+ W+
Sbjct: 483 IVSLSSSTWGAFLDA-CRRHGNVQLSKVAATQLLSMEPRKPVN-YINLASVYAANGAWDN 540
Query: 456 VGLLRKLMSDKG-VTKKPGCSLI 477
RKLM + G K PG SL+
Sbjct: 541 ALNTRKLMKESGSCNKAPGYSLV 563
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 169/370 (45%), Gaps = 15/370 (4%)
Query: 41 IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYA 100
IH ++ T L L ++ Y D+ +A +LF K + W +I ++
Sbjct: 34 IHGNSI----TNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFS 89
Query: 101 RSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYE 160
R H A+ L+K M E+V + +T+ VLK+C L EG Q+H + K
Sbjct: 90 RCGYHP-DALLLFKEMH---REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCA 145
Query: 161 SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM 220
+ + ++L+ YA CG ++ A F +M E+ VSWN M+D Y DT+ +F M
Sbjct: 146 GNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM 205
Query: 221 L-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
L + PD +T S++ A + L + H +K +A L+ + LV+ Y KC
Sbjct: 206 LTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSA--LIRS-LVNAYVKC 262
Query: 280 GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEA-ALDYFFRMVKIEKFVPNSITFVG 338
GSL A ++ E RD+ S ++I GFS + A D F M+++ K + +
Sbjct: 263 GSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM-KTKMDEVVVSS 321
Query: 339 VLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
+L C V G K + + L+D++A++G I++A+ EM K
Sbjct: 322 MLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK 381
Query: 399 PDAVIWRSLL 408
D W SL+
Sbjct: 382 -DVRSWTSLI 390
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 5/227 (2%)
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
ML++ E + + LK C++ + +H + G+ S+ ++ + LI Y
Sbjct: 1 MLVVSENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQ 60
Query: 177 GCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVI 235
G + A K+F +S++ VSW M+ + R G AL +F EM + + +T SV+
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVL 120
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
+C LG L GM H V K N A +++V + L+ +Y +CG +E A+ F+ M R
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEK---GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER 177
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
D+ SWN++I G++ + A+ + F+++ E P+ TF +L A
Sbjct: 178 DLVSWNAMIDGYTANACADTSFS-LFQLMLTEGKKPDCFTFGSLLRA 223
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 209/393 (53%), Gaps = 21/393 (5%)
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEG 147
N WN++I+AY + + + L+ ++ D ++ ++ H + +
Sbjct: 280 NVVSWNSMIKAYLKVGD--------VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
+ +++ D N ++ YA+ G +++A F+ EK VSWN ++ +Y +
Sbjct: 332 FALFSEMPN----RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKN 387
Query: 208 GEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
++ A+ +F M ++ PD +T+ S++SA GL L LGM H V+K V DV
Sbjct: 388 KDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK----TVIPDV 443
Query: 267 LVNTCLVDMYCKCGSLEIAQQVFERMPY-RDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
V+ L+ MY +CG + ++++F+ M R+V +WN++I G++ HG A AL+ F M K
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM-K 502
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
P+ ITFV VL+AC H G+V+E F M Y +EP++EHY LV++ + G+
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF 562
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSK 445
+EA+ +++ MP +PD +W +LLDA C+ +V L A+ + +E S YVLL
Sbjct: 563 EEAMYIITSMPFEPDKTVWGALLDA-CRIYNNVGLAHVAAEAMSRLEPE-SSTPYVLLYN 620
Query: 446 LYASASRWNEVGLLRKLMSDKGVTKKPGCSLIE 478
+YA W+E +R M K + K+ G S ++
Sbjct: 621 MYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 12/241 (4%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
Y+S+ ++ A F + ++ WN++I AY ++ ++K +A++L+ M + E+ PD
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK-EAVDLFIRMNIEGEK---PD 408
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
+T +L A +L G Q+H ++K D + N+LI Y+ CG + + +IF
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 188 NMSEKSEV-SWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGAL 244
M K EV +WN M+ Y G AL +FG M K + P T SV++ACA G +
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGNASEALNLFGSM-KSNGIYPSHITFVSVLNACAHAGLV 526
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSI 303
+V + + + LV++ G E A + MP+ D W ++
Sbjct: 527 DEA--KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGAL 584
Query: 304 I 304
+
Sbjct: 585 L 585
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 25/258 (9%)
Query: 144 LCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDS 203
LC + LG+ + + N +I G + A IF+ + ++ V+WN M+
Sbjct: 25 LCANSFSTSVSSSLGFRATNKELNQMIR----SGYIAEARDIFEKLEARNTVTWNTMISG 80
Query: 204 YVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
YV+ E + A K+F M K TM S +C G+ L K D+ +
Sbjct: 81 YVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLE-------EARKLFDEMPS 133
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
D ++ Y K + A +FE+MP R+ SW+++I GF +G+ ++A+ FR
Sbjct: 134 RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAV-VLFRK 192
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV-----EPRLEHYGCLVDL 378
+ ++ P G++ NE L + +Y E + Y L+
Sbjct: 193 MPVKDSSPLCALVAGLIK--------NERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVG 244
Query: 379 FARAGRIQEALNLVSEMP 396
+ + G+++ A L ++P
Sbjct: 245 YGQRGQVEAARCLFDQIP 262
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 157/364 (43%), Gaps = 65/364 (17%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A +F N+ WNT+I Y + +QA +L+ +M + +VV + +
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKR-REMNQARKLFD---VMPKRDVVTWNTMISGYV- 113
Query: 137 ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS 196
+C L E +++ ++ D+ N++I YA + AL +F+ M E++ VS
Sbjct: 114 SCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 197 WNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMK 256
W+ M+ + + GE D+A+ +F +M + + L AL G+ +K
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKM-------------PVKDSSPLCALVAGL------IK 210
Query: 257 KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAA 316
+ AA VL + GSL ++ V ++N++I+G+ G+ EAA
Sbjct: 211 NERLSEAAWVL---------GQYGSLVSGREDL-------VYAYNTLIVGYGQRGQVEAA 254
Query: 317 LDYFFRMVKI----------EKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVE 366
F ++ + E+F N +++ ++ A G V + FD M +
Sbjct: 255 RCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS 314
Query: 367 PRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAK 426
+ ++D + R+++A L SEMP + DA W ++ ASV E+A+
Sbjct: 315 -----WNTMIDGYVHVSRMEDAFALFSEMPNR-DAHSWNMMVSGY----ASVG-NVELAR 363
Query: 427 QVFE 430
FE
Sbjct: 364 HYFE 367
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 201/406 (49%), Gaps = 50/406 (12%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+QIH ++ T + L + ++ +Y+ +L + F + N WN L+
Sbjct: 336 RQIHGMLIKNGCET----GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
YA +K I L + M++ P YTF LK+C T E +Q+H+ ++++G
Sbjct: 392 YA----NKDGPICL-SLFLQMLQMGFRPTEYTFSTALKSCCVT----ELQQLHSVIVRMG 442
Query: 159 YESDTRICNSLIHFYATCGCLDMAL--------------------------------KIF 186
YE + + +SL+ YA ++ AL K+
Sbjct: 443 YEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLI 502
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALS 245
+ + VSWN+ + + R+ + +++F ML+ + PD YT S++S C+ L L+
Sbjct: 503 STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLT 562
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
LG H + K AD V L+DMY KCGS+ +VFE +++ +W ++I
Sbjct: 563 LGSSIHGLITKT--DFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALIS 620
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
+HG + AL+ F + + F P+ ++F+ +L+AC H GMV EG+ F M K+Y V
Sbjct: 621 CLGIHGYGQEALEKFKETLSL-GFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGV 678
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
EP ++HY C VDL AR G ++EA +L+ EMP DA +WR+ LD C
Sbjct: 679 EPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 42/325 (12%)
Query: 130 TFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM 189
+F VLK + L KQ+H K G + + + NSLI Y CG MA ++FQ+
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK-LHDPDGYTMQSVISACAGLGALSLGM 248
VSWN ++ + ++ ALK+F M + P+ T SV+ + + LS G
Sbjct: 277 GSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFS 308
H ++K +++ L+D Y KCG+LE ++ F+ + +++ WN+++ G++
Sbjct: 337 QIHGMLIK---NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA 393
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC------------------------- 343
+ L F +M+++ F P TF L +C
Sbjct: 394 -NKDGPICLSLFLQMLQM-GFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLS 451
Query: 344 ------NHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
++N+ L+ D + +V P + +++R G+ E++ L+S +
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTSVVP----LNIVAGIYSRRGQYHESVKLISTLE- 506
Query: 398 KPDAVIWRSLLDACCKQDASVELGE 422
+PD V W + AC + D E+ E
Sbjct: 507 QPDTVSWNIAIAACSRSDYHEEVIE 531
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 169/397 (42%), Gaps = 39/397 (9%)
Query: 39 KQIH-AQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIR 97
KQ+H + T + +D + + + ++ Y + + A R+F G + WN +I
Sbjct: 235 KQLHCSATKKGLDC-----EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 98 AYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL 157
A A+S N ++ K + M E P+ T+ VL + L G+Q+H L+K
Sbjct: 290 ATAKSEN----PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
G E+ + N+LI FYA CG L+ + F + +K+ V WN ++ Y + L +F
Sbjct: 346 GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLF 404
Query: 218 GEMLKL-HDPDGYTMQSVISACAGLG-------ALSLGMWAHAYVMKKCDKNVAADVLVN 269
+ML++ P YT + + +C + +G + YV+ ++ A + L+N
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
Query: 270 TCLV------------------DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHG 311
L+ +Y + G + ++ + D SWN I S
Sbjct: 465 DALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSD 524
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH 371
E ++ F M++ P+ TFV +LS C+ + G ++TK
Sbjct: 525 YHEEVIELFKHMLQ-SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFV 583
Query: 372 YGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
L+D++ + G I+ + + E K + + W +L+
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTALI 619
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLG--YESDTRICNSLIHFYATCGCLDMALKIFQNMSE 191
+L C S K +HA + L +CN++I Y G + +A K+F M E
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 192 KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWA 250
+++VS+N ++ Y + G+ D A VF EM + P+ T+ ++S CA L + G
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLDVRA-GTQL 135
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMH 310
H +K AD V TCL+ +Y + LE+A+QVFE MP++ + +WN ++
Sbjct: 136 HGLSLKY--GLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
G + + +F +V++ + S +F+GVL
Sbjct: 194 GFLKECMFFFRELVRMGASLTES-SFLGVLKG 224
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 210/415 (50%), Gaps = 10/415 (2%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
S I+ YS + A++LF P+ +WN +I Y + I L+ LM
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYG-CCGFWDKGINLFN---LMQH 200
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
P+ YT + L VHA LK+ +S + + +L++ Y+ C C+
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS 260
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAG 240
A +F ++SE V+ + ++ Y R G AL +F E+ + PD + V+ +CA
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAE 320
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
L G H+YV++ + D+ V + L+DMY KCG L+ A +F +P +++ S+
Sbjct: 321 LSDSVSGKEVHSYVIRL---GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
NS+ILG +HG A A + F ++++ +P+ ITF +L C H G++N+G F+ M
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEM-GLIPDEITFSALLCTCCHSGLLNKGQEIFERMK 436
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVEL 420
E+ +EP+ EHY +V L AG+++EA V + D+ I +LL +CC+ + L
Sbjct: 437 SEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALL-SCCEVHENTHL 495
Query: 421 GEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
E +A+ + + S V+LS +YA RW+EV LR +S+ K PG S
Sbjct: 496 AEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 203/473 (42%), Gaps = 63/473 (13%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQAL-------------FLYSRILHYYSSLADLNYATRL 80
+ + L+ I + R I T + Q L + +++ +Y+ DL A +L
Sbjct: 3 SQTQLRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKL 62
Query: 81 FHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAH 140
F F + + F+WN++IRAYA++ HQ + ++ + PD++T+ + + +
Sbjct: 63 FDVFPERSVFLWNSIIRAYAKA----HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 141 TFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVM 200
+F + +H + G D ++++ Y+ G + A K+F ++ + WNVM
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVM 178
Query: 201 VDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCD 259
+ Y G +D + +F M + H P+ YTM ++ S L + HA+ +K
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLK--- 235
Query: 260 KNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDY 319
N+ + V LV+MY +C + A VF + D+ + +S+I G+S G + AL +
Sbjct: 236 INLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEAL-H 294
Query: 320 FFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLF 379
F +++ P+ + VL +C G + + +E ++ L+D++
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR-LGLELDIKVCSALIDMY 353
Query: 380 ARAGRIQEALNLVSEMPIK----------------------------------PDAVIWR 405
++ G ++ A++L + +P K PD + +
Sbjct: 354 SKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFS 413
Query: 406 SLLDACCKQ---DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNE 455
+LL CC + E+ E M K F IE + YV + KL A + E
Sbjct: 414 ALLCTCCHSGLLNKGQEIFERM-KSEFGIEPQ--TEHYVYMVKLMGMAGKLEE 463
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 217/420 (51%), Gaps = 25/420 (5%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
+ ++ Y+ + A + F ++ +N L + Y + + ++A ++YK M L
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD-ANKAFDVYKNMKL--- 495
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
V PD T +L+ CA G V+ Q++K G++S+ + ++LI+ + C L
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555
Query: 182 ALKIFQNMS-EKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACA 239
A+ +F EKS VSWN+M++ Y+ G+ + A+ F +M ++ P+ T +++ A A
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
L AL +GM H+ +++ C + V LVDMY KCG +E +++ F + + + S
Sbjct: 616 ELSALRVGMSVHSSLIQ-C--GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS 672
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
WN+++ ++ HG A A+ F M + E P+S++F+ VLSAC H G+V EG F+ M
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENE-LKPDSVSFLSVLSACRHAGLVEEGKRIFEEM 731
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ + +E +EHY C+VDL +AG EA+ ++ M +K +W +LL++ + ++
Sbjct: 732 GERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNS-SRMHCNLW 790
Query: 420 LGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEI 479
L Q+ ++E L Y+ R EV + + + K P CS IE+
Sbjct: 791 LSNAALCQLVKLEP--------LNPSHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 180/351 (51%), Gaps = 12/351 (3%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
S ++ Y + ADL A +F + + W T++ AYA + + + +EL+ LM
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE-EVLELFD---LMRN 293
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
+V + L+A A+ L +G +H ++ G D + SL+ Y+ CG L++
Sbjct: 294 YDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI 353
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAG 240
A ++F N+ ++ VSW+ M+ SY +AG+ D A+ +F +M+++H P+ T+ SV+ CAG
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAG 413
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
+ A LG H Y +K ++ +++ T ++ MY KCG A + FER+P +D ++
Sbjct: 414 VAASRLGKSIHCYAIK---ADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAF 470
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG-LMYFDMM 359
N++ G++ G A A D + M K+ P+S T VG+L C G +Y ++
Sbjct: 471 NALAQGYTQIGDANKAFDVYKNM-KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
++ E + H L+++F + + A+ L + + V W +++
Sbjct: 530 KHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNG 578
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 186/397 (46%), Gaps = 42/397 (10%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMM 120
++++++ YS + + +F P +WN++IR Y R+ H+ +A+ + M
Sbjct: 36 HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHR-EALGFFGYMS--E 92
Query: 121 EEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLD 180
E+ + PD Y+F F LKACA + +G ++H + ++G ESD I +L+ Y L
Sbjct: 93 EKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLV 152
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLK-LHDPDGYTMQSVISACA 239
A ++F M K V+WN MV + G AL +F +M D D ++ ++I A +
Sbjct: 153 SARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS 299
L + H V+KK ++ L+DMYC C L A+ VFE + +D +S
Sbjct: 213 KLEKSDVCRCLHGLVIKK-----GFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 300 WNSIILGFSMHGKAEAALDYF-------FRMVKI--------EKFVPNSITFVGVLSACN 344
W +++ ++ +G E L+ F RM K+ +V + + + +
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 345 HRGMVNEGLMYFDMMTKE-------------YNVEPR-LEHYGCLVDLFARAGRIQEALN 390
+G++ + + +M+ N+E R + + ++ + +AG+ EA++
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 391 LVSEM---PIKPDAVIWRSLLDACCKQDASVELGEEM 424
L +M IKP+AV S+L C AS LG+ +
Sbjct: 388 LFRDMMRIHIKPNAVTLTSVLQGCAGVAAS-RLGKSI 423
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 238/488 (48%), Gaps = 80/488 (16%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L + ++ +Y + L A ++F P+ WN+L+ Y +S + + I L+ + +
Sbjct: 92 LSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ-EGICLF---LEL 147
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYE-SDTRICNSLIHFYATCGC 178
+V P+ ++F L ACA G +H++L+KLG E + + N LI Y CG
Sbjct: 148 HRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGF 207
Query: 179 LDMALKIFQNMSEKSEVSWNVMV-------------------------------DSYVRA 207
+D A+ +FQ+M EK VSWN +V D++V++
Sbjct: 208 MDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKS 267
Query: 208 GEFDTALKVFGEM----------------------------LKLHDP----DGYTMQSVI 235
G+F+ A +V +M K+H D Y++ V+
Sbjct: 268 GDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVL 327
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAAD--VLVNTCLVDMYCKCGSLEIAQQVFERMP 293
+A A L + G HA C + D V+V + L+DMY KCG L+ A+ +F MP
Sbjct: 328 AAVAALAVVPWGSLIHA-----CAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP 382
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV-PNSITFVGVLSACNHRGMVNEG 352
+++ WN +I G++ +G + A+ F +K E+F+ P+ TF+ +L+ C+H + E
Sbjct: 383 RKNLIVWNEMISGYARNGDSIEAIK-LFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEV 441
Query: 353 LM-YFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
++ YF+MM EY ++P +EH L+ + G + +A ++ E D V WR+LL AC
Sbjct: 442 MLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGAC 501
Query: 412 CKQDASVELGEEMAKQVFEI-EGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTK 470
+ ++ + +A ++ E+ + Y+++S LYA RW EVG +RK+M + GV K
Sbjct: 502 SARK-DLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLK 560
Query: 471 KPGCSLIE 478
+ G S I+
Sbjct: 561 EVGSSWID 568
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 169/358 (47%), Gaps = 60/358 (16%)
Query: 75 NYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFV 134
N T H +S W+T++ A AR +I + +A + ++ + PD +
Sbjct: 7 NAFTTRSHVGSTASSNSWSTIVPALARFG-----SIGVLRAAVELINDGEKPDASPLVHL 61
Query: 135 LKACAHT--FSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
L+ + SLC +Q+H + K G+ S+TR+ NSL+ FY T L+ A K+F M +
Sbjct: 62 LRVSGNYGYVSLC--RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD----PDGYTMQSVISACAGLGALSLGM 248
+SWN +V YV++G F + +F L+LH P+ ++ + ++ACA L LG
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLF---LELHRSDVFPNEFSFTAALAACARLHLSPLGA 176
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFS 308
H+ ++K + +V+V CL+DMY KCG ++ A VF+ M +D SWN+I+ S
Sbjct: 177 CIHSKLVKLGLEK--GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPR 368
+GK E L +F +M P+++T+ NE
Sbjct: 235 RNGKLELGLWFFHQMPN-----PDTVTY-------------NE----------------- 259
Query: 369 LEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAK 426
L+D F ++G A ++S+MP P++ W ++L + S E E K
Sbjct: 260 ------LIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTGYVNSEKSGEATEFFTK 310
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 184/353 (52%), Gaps = 10/353 (2%)
Query: 77 ATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLK 136
A LF + N WN ++ Y H H+ E + LM +E D+ T ++L
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYV----HAHEWDEALDFLTLMRQEIENIDNVTLVWILN 403
Query: 137 ACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSE-KSEV 195
C+ + GKQ H + + GY+++ + N+L+ Y CG L A F+ MSE + EV
Sbjct: 404 VCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVM 255
SWN ++ R G + AL F M P YT+ ++++ CA + AL+LG H +++
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEA 315
+ K DV++ +VDMY KC + A +VF+ RD+ WNSII G +G+++
Sbjct: 524 RDGYK---IDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKE 580
Query: 316 ALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCL 375
+ F +++ E P+ +TF+G+L AC G V G YF M+ +Y++ P++EHY C+
Sbjct: 581 VFELFM-LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCM 639
Query: 376 VDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQV 428
++L+ + G + + + MP P + + DAC + S +LG AK++
Sbjct: 640 IELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS-KLGAWAAKRL 691
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 193/426 (45%), Gaps = 53/426 (12%)
Query: 41 IHAQTLRTIDTTNHP-QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAY 99
+ A+ +++ T P +FL +R + Y ++ A LF + + WN +I A
Sbjct: 78 VQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
A++ E+++ M + V +F VLK+C L +Q+H ++K GY
Sbjct: 138 AQNGVSD----EVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGY 193
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGE 219
+ + S++ Y C + A ++F + S+VSWNV+V Y+ G D A+ +F +
Sbjct: 194 SGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFK 253
Query: 220 MLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
ML+L+ P +T+ SV+ AC+ AL +G HA +K +V AD +V+T + DMY K
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK---LSVVADTVVSTSVFDMYVK 310
Query: 279 CGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVG 338
C LE A++VF++ +D+ SW S + G++M G A + F M + N +++
Sbjct: 311 CDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE-----RNIVSWNA 365
Query: 339 VLSACNHRGMVNEGLMYFDMMTKEY-------------------NVEPRLEHYG------ 373
+L H +E L + +M +E +V+ + +G
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425
Query: 374 ---------CLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEM 424
L+D++ + G +Q A +M D V W +LL + S E
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS-----EQ 480
Query: 425 AKQVFE 430
A FE
Sbjct: 481 ALSFFE 486
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 154/349 (44%), Gaps = 24/349 (6%)
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
KA+ ++ ++ + + ++C+ + + ++V + L+ + N I Y
Sbjct: 47 KAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAY 106
Query: 174 ATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGY---- 229
CGC+D A ++F+ M E+ SWN ++ + + G D ++F M + DG
Sbjct: 107 GKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM----NRDGVRATE 162
Query: 230 -TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV 288
+ V+ +C + L L H V+K + +V + T +VD+Y KC + A++V
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVK---YGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 289 FERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGM 348
F+ + SWN I+ + G + A+ FF+M+++ P + T V+ AC+
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL-NVRPLNHTVSSVMLACSRSLA 278
Query: 349 VNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLL 408
+ G + + K V + + D++ + R++ A + + K D W S +
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTS-VFDMYVKCDRLESARRVFDQTRSK-DLKSWTSAM 336
Query: 409 DACCKQDASVELGEEMAKQVFEI--EGSVCSGAYVLLSKLYASASRWNE 455
+ E A+++F++ E ++ S +L Y A W+E
Sbjct: 337 SGYAMSGLTRE-----ARELFDLMPERNIVSWNAMLGG--YVHAHEWDE 378
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 73/195 (37%), Gaps = 50/195 (25%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
YS +YA +F + +WN++IR R+ K E+++ ML+ E V PD
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSK----EVFELFMLLENEGVKPD 596
Query: 128 HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
H TF +L+AC G +++ + F
Sbjct: 597 HVTFLGILQACIRE-----------------------------------GHVELGFQYFS 621
Query: 188 NMSEKSEVS-----WNVMVDSYVRAGEFDTALKVFGEMLKL--HDPDGYTMQSVISACAG 240
+MS K +S ++ M++ Y + G L E L L DP + + AC
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYG----CLHQLEEFLLLMPFDPPMQMLTRINDACQR 677
Query: 241 LGALSLGMWAHAYVM 255
LG WA +M
Sbjct: 678 YRWSKLGAWAAKRLM 692
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 226/461 (49%), Gaps = 55/461 (11%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
+++ + ++ YS + A R+F + +N I + + ++ M
Sbjct: 164 VYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVM-NLVPSVFNLMR 222
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
EE P+ TF + ACA +L G+Q+H ++K ++ +T + +LI Y+ C
Sbjct: 223 KFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 178 CLDMALKIFQNMSE-KSEVSWNVMVDSYVRAGEFDTALKVF----GEMLKLHDPDGYT-- 230
C A +F + + ++ +SWN ++ + G+ +TA+++F E LK PD T
Sbjct: 281 CWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK---PDSATWN 337
Query: 231 ---------------------------------MQSVISACAGLGALSLGMWAHAYVMKK 257
+ S++SAC+ + L G H +V+K
Sbjct: 338 SLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKA 397
Query: 258 CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM--PYRDVNSWNSIILGFSMHGKAEA 315
+ D+ V T L+DMY KCG A+++F+R +D WN +I G+ HG+ E+
Sbjct: 398 AAER---DIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES 454
Query: 316 ALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCL 375
A++ F +++ EK P+ TF VLSAC+H G V +G F +M +EY +P EH GC+
Sbjct: 455 AIE-IFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513
Query: 376 VDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSV 435
+DL R+GR++EA ++ +M +V S L C+Q LGEE A ++ E+E
Sbjct: 514 IDLLGRSGRLREAKEVIDQMSEPSSSV--YSSLLGSCRQHLDPVLGEEAAMKLAELEPE- 570
Query: 436 CSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSL 476
+V+LS +YA+ RW +V +R+++ K + K PG SL
Sbjct: 571 NPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 11/303 (3%)
Query: 126 PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKI 185
P+ +TFP +LK+CA + +G+ +HAQ++K G+ D +L+ Y + ALK+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 186 FQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALS 245
M E+ S N V + G A ++FG+ G +V S G G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD--ARVSGSGMNSVTVASVLGGCGDIE 146
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
GM H MK +V V T LV MY +CG +A ++FE++P++ V ++N+ I
Sbjct: 147 GGMQLHCLAMKS---GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM-MTKEYN 364
G +G F M K PN +TFV ++AC + G + M KE+
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 365 VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC---KQDASVELG 421
E + L+D++++ + A + +E+ + + W S++ + + +VEL
Sbjct: 264 FETMVGT--ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 422 EEM 424
E++
Sbjct: 322 EKL 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 224 HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLE 283
H P+ +T ++ +CA LG + G HA V+K DV T LV MY K +
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVK---TGFFVDVFTATALVSMYMKVKQVT 83
Query: 284 IAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM---VKIEKFVPNSITFVGVL 340
A +V + MP R + S N+ + G +G A FRM ++ NS+T VL
Sbjct: 84 DALKVLDEMPERGIASVNAAVSGLLENGFCRDA----FRMFGDARVSGSGMNSVTVASVL 139
Query: 341 SACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
C EG M + + E + LV +++R G A + ++P K
Sbjct: 140 GGCGDI----EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK 193
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 13/441 (2%)
Query: 56 QALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+++ L + ++ Y D A +F N W +I + N++ ++L++A
Sbjct: 183 ESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYE-MGVDLFRA 241
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAH-TFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA 174
M E + P+ T VL AC + K++H + G +D R+ + + Y
Sbjct: 242 MQ---RENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 175 TCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQS 233
CG + ++ +F+ + V W+ M+ Y G+ + + +M K + + T+ +
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
++SAC LS H+ ++K C + +L+ L+DMY KCGSL A++VF +
Sbjct: 359 IVSACTNSTLLSFASTVHSQILK-C--GFMSHILLGNALIDMYAKCGSLSAAREVFYELT 415
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
+D+ SW+S+I + +HG AL+ F M+K V + + F+ +LSACNH G+V E
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV-DDMAFLAILSACNHAGLVEEAQ 474
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK 413
F K Y++ LEHY C ++L R G+I +A + MP+KP A IW SLL AC
Sbjct: 475 TIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACET 533
Query: 414 QDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPG 473
G+ +A ++ + E YVLLSK++ + ++ +R++M + + K G
Sbjct: 534 HGRLDVAGKIIANELMKSEPDN-PANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYG 592
Query: 474 CSLIEIDGVAHEFFAGDTTHP 494
S IE + + E + G + P
Sbjct: 593 FSKIEPE-LQIEDYQGKSWSP 612
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 29/294 (9%)
Query: 131 FPFVLKACA---HTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQ 187
P V+KACA F L G Q+H LK G + DT + NSLI YA K+F
Sbjct: 49 LPSVIKACAFQQEPFLL--GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFD 106
Query: 188 NMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALS- 245
M + VS+ +++S + G A+K+ EM P + S+++ C +G+ S
Sbjct: 107 EMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSK 166
Query: 246 LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL 305
+ HA V+ D+ + VL++T LVDMY K A VF++M ++ SW ++I
Sbjct: 167 VARMFHALVL--VDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMIS 224
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G + E +D FR ++ E PN +T + VL AC L Y + KE +
Sbjct: 225 GCVANQNYEMGVD-LFRAMQRENLRPNRVTLLSVLPACVE-------LNYGSSLVKE--I 274
Query: 366 EPRLEHYGCLVD---------LFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+GC D ++ R G + + L ++ D V+W S++
Sbjct: 275 HGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVVMWSSMISG 327
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 222/444 (50%), Gaps = 23/444 (5%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+Q+HA ++ T + ++ YS L + R+F + + WN L+
Sbjct: 104 RQVHALMIKQGAETGTISK----TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+ R+ K +A+ ++ AM E V +T V+K CA L +GKQVHA ++ G
Sbjct: 160 FLRNGKGK-EALGVFAAMY---RERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMS-EKSEVSWNVMVDSYVRAGEFDTALKVF 217
+ + ++I FY++ G ++ A+K++ +++ EV N ++ +R + A
Sbjct: 216 RDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFL-- 272
Query: 218 GEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
++ P+ + S ++ C+ L +G H ++ +D + L+DMY
Sbjct: 273 --LMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN---GFVSDSKLCNGLMDMYG 327
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV-PNSITF 336
KCG + A+ +F +P + V SW S+I ++++G AL+ F M + V PNS+TF
Sbjct: 328 KCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTF 387
Query: 337 VGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
+ V+SAC H G+V EG F MM ++Y + P EHY C +D+ ++AG +E LV M
Sbjct: 388 LVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMM 447
Query: 397 IKPDA----VIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASASR 452
+ IW ++L A C + + GE +A+++ E G + YVL+S YA+ +
Sbjct: 448 ENDNQSIPCAIWVAVLSA-CSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGK 506
Query: 453 WNEVGLLRKLMSDKGVTKKPGCSL 476
W+ V LR + +KG+ K G SL
Sbjct: 507 WDVVEELRGKLKNKGLVKTAGHSL 530
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 18/290 (6%)
Query: 126 PD--HYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMAL 183
PD +TF VL AC+ G+QVHA ++K G E+ T +LI Y+ G L ++
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSV 139
Query: 184 KIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLG 242
++F+++ EK VSWN ++ ++R G+ AL VF M + + +T+ SV+ CA L
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 243 ALSLGMWAHAYVMKKCDKNVAAD-VLVNTCLVDMYCKCGSLEIAQQVFERMP-YRDVNSW 300
L G HA V+ D V++ T ++ Y G + A +V+ + + D
Sbjct: 200 ILQQGKQVHAMVVV-----TGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML 254
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
NS+I G + + A F M + PN L+ C+ + G +
Sbjct: 255 NSLISGCIRNRNYKEA---FLLMSRQR---PNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
+ V G L+D++ + G+I +A + +P K V W S++DA
Sbjct: 309 RNGFVSDSKLCNG-LMDMYGKCGQIVQARTIFRAIPSK-SVVSWTSMIDA 356
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 186/354 (52%), Gaps = 12/354 (3%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K++HA L++ + P F++S ++ Y D+ R+F+ + N+ W L+
Sbjct: 336 KEVHAHVLKSKNYVEQP---FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
YA AN + + ++++ M +E PD T VL CA ++ +GK++H LK
Sbjct: 393 YA--ANGRFD--QALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ + + SL+ Y+ CG + +++F + +++ +W M+D YV + ++VF
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 219 EML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
ML H PD TM V++ C+ L AL LG H +++KK +++ V+ ++ MY
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP---FVSARIIKMYG 565
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
KCG L A F+ + + +W +II + + A++ F +MV F PN+ TF
Sbjct: 566 KCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVS-RGFTPNTFTFT 624
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
VLS C+ G V+E +F++M + YN++P EHY +++L R GR++EA L
Sbjct: 625 AVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 149/301 (49%), Gaps = 14/301 (4%)
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVP-DHYTFPFVLKACAHTFSLCE 146
N ++ + I+ +AR N +E+ ++ +E+ +P + TF +L+AC SL
Sbjct: 75 NPYIIHRDIQIFARQNN-----LEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLH 129
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
GKQVH + G ES+ + L+H Y CG + A K+F + + SWN ++ V
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 207 AGE--FDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
+G+ + L F EM +L D + Y++ +V + AG AL G+ HA +K N
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-- 247
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
V + T LVDMY KCG + +A++VF+ + RD+ W ++I G + + + AL F M
Sbjct: 248 -SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM 306
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYN-VEPRLEHYGCLVDLFARA 382
+ EK PNS+ +L + G + K N VE H G L+DL+ +
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKC 365
Query: 383 G 383
G
Sbjct: 366 G 366
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 188/434 (43%), Gaps = 45/434 (10%)
Query: 34 TMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWN 93
++ H KQ+H I FL ++++H Y++ + A ++F N + WN
Sbjct: 126 SLLHGKQVHVH----IRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWN 181
Query: 94 TLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQ 153
L+R S ++Q ++ M E V + Y+ V K+ A +L +G + HA
Sbjct: 182 ALLRGTVISGKKRYQ--DVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHAL 239
Query: 154 LLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTA 213
+K G + + SL+ Y CG + +A ++F + E+ V W M+ A
Sbjct: 240 AIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEA 299
Query: 214 LKVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTC 271
L +F M+ P+ + +++ + AL LG HA+V+K KN V++
Sbjct: 300 LGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK--SKNYVEQPFVHSG 357
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
L+D+YCKCG + ++VF R+ SW +++ G++ +G+ + AL M + E F P
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ-EGFRP 416
Query: 332 NSITFVGVLSACNHRGMVNEG-----------------------LMYFDMMTKEYNVE-- 366
+ +T VL C + +G +MY EY +
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLF 476
Query: 367 PRLEH-----YGCLVDLFARAGRIQEALNLVSEMPI---KPDAVIWRSLLDACCKQDASV 418
RLE + ++D + ++ + + M + +PD+V +L C A +
Sbjct: 477 DRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKA-L 535
Query: 419 ELGEEMAKQVFEIE 432
+LG+E+ + + E
Sbjct: 536 KLGKELHGHILKKE 549
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 200/412 (48%), Gaps = 32/412 (7%)
Query: 201 VDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQS-----VISACAGLGALSLGMWAHAYVM 255
+DS R G+ A+ E++K +GY + + C AL H ++
Sbjct: 153 LDSICREGKVKKAV----EIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFIT 208
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEA 315
+D+ +++MY CGS+E A VF MP R++ +W +I F+ +G+ E
Sbjct: 209 SSVG---ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGED 265
Query: 316 ALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCL 375
A+D F R K E P+ F + AC G +NEGL++F+ M KEY + P +EHY L
Sbjct: 266 AIDTFSRF-KQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSL 324
Query: 376 VDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSV 435
V + A G + EAL V M +P+ +W +L++ + + LG+ V +++ S
Sbjct: 325 VKMLAEPGYLDEALRFVESM--EPNVDLWETLMN-LSRVHGDLILGDRCQDMVEQLDAS- 380
Query: 436 CSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPK 495
++ ++ GL+ SD K + G+ + AGD + P+
Sbjct: 381 -------------RLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRY-MAAGDISRPE 426
Query: 496 SEDIYKFLNEIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPG 555
+ ++Y L + E + +GY+P S L D + K L H+ER A L++
Sbjct: 427 NRELYMALKSLKEHMIEIGYVP-LSKLALHDVDQESKDENLFNHNERFAFISTFLDTPAR 485
Query: 556 MPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
IRV KNLRVC+DCH KL+S I E+I RD RFHH KDG CSC +YW
Sbjct: 486 SLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 7/205 (3%)
Query: 108 QAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICN 167
+A+E+ K+ E V D ++ + C +L E K VH + SD N
Sbjct: 164 KAVEIIKSWR---NEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYN 220
Query: 168 SLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDP 226
S+I Y+ CG ++ AL +F +M E++ +W ++ + + G+ + A+ F + + P
Sbjct: 221 SIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKP 280
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
DG + + AC LG ++ G+ + K+ + V+ LV M + G L+ A
Sbjct: 281 DGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVS--LVKMLAEPGYLDEAL 338
Query: 287 QVFERMPYRDVNSWNSIILGFSMHG 311
+ E M +V+ W +++ +HG
Sbjct: 339 RFVESME-PNVDLWETLMNLSRVHG 362
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 213/431 (49%), Gaps = 43/431 (9%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGK-PNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
++ ++ Y S D A+ LF N+ W +I+ Y + + +A EL++ M
Sbjct: 115 WNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIE-KARELFERM--- 170
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY-------ESDTRICNSLIHF 172
PF LK +S+ G V+ + ++ E + + + ++
Sbjct: 171 ------------PFELKN-VKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSG 217
Query: 173 YATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTM 231
Y G + A IF + + V WN ++ Y + G D A+ F M + ++PD T+
Sbjct: 218 YFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTV 277
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
S++SACA G L +G H+ + + + + V+ L+DMY KCG LE A VFE
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHR---GIELNQFVSNALIDMYAKCGDLENATSVFES 334
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
+ R V NS+I ++HGK + AL+ F M ++ P+ ITF+ VL+AC H G + E
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD-LKPDEITFIAVLTACVHGGFLME 393
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDAC 411
GL F M K +V+P ++H+GCL+ L R+G+++EA LV EM +KP+ + +LL AC
Sbjct: 394 GLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGAC 452
Query: 412 CKQDASVELGEEMAKQVFEI---EGSVCS----GAYVLLSKLYASASRWNEVGLLRKLMS 464
V + EMA+QV +I GS+ + +S LYA RW LR M
Sbjct: 453 -----KVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEME 507
Query: 465 DKGVTKKPGCS 475
+G+ K PG S
Sbjct: 508 KRGLEKSPGLS 518
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 27/295 (9%)
Query: 132 PFVLKACAHTFS-LCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
P +L+ACA + GK +H++ +K G SD + +SLI Y CGC+ A K+F M
Sbjct: 49 PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP 108
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP-------DGYTMQSVISACAGL-- 241
E++ +WN M+ Y+ G+ A +F E+ + GY + I L
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFE 168
Query: 242 -----------GALSLGMWAHAYVMKKCDKNV----AADVLVNTCLVDMYCKCGSLEIAQ 286
++ LG++ + M+ K + V + ++ Y + G + A+
Sbjct: 169 RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 287 QVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHR 346
+F R+ RD+ WN++I G++ +G ++ A+D FF M + E + P+++T +LSAC
Sbjct: 229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM-QGEGYEPDAVTVSSILSACAQS 287
Query: 347 GMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDA 401
G ++ G ++ +E L+D++A+ G ++ A ++ + ++ A
Sbjct: 288 GRLDVGREVHSLINHR-GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 8/249 (3%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMML 118
F++S ++ Y + D++ A +F+ + +WNTLI YA++ + AI+ A
Sbjct: 209 FVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNG-YSDDAID---AFFN 264
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M E PD T +L ACA + L G++VH+ + G E + + N+LI YA CG
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 179 LDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISA 237
L+ A +F+++S +S N M+ G+ AL++F M L PD T +V++A
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 238 CAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV 297
C G L G+ + MK D V +V CL+ + + G L+ A ++ + M +
Sbjct: 385 CVHGGFLMEGLKIFSE-MKTQD--VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPN 441
Query: 298 NSWNSIILG 306
++ +LG
Sbjct: 442 DTVLGALLG 450
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYF 320
V +DV+V + L+ MY KCG + A++VF+ MP R+V +WN++I G+ +G A A F
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 321 FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
+ N++T++ ++ R + + F+ M E ++ + ++ ++
Sbjct: 136 EEI----SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGVYV 188
Query: 381 RAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
++++A ++P K +A +W ++
Sbjct: 189 NNRKMEDARKFFEDIPEK-NAFVWSLMMSG 217
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 238/506 (47%), Gaps = 50/506 (9%)
Query: 48 TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKH 107
+I+ ++H L++ + ++ Y ++ A RLF + ++ WN +I Y S
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT-SEEKLG 267
Query: 108 QAIELYKAMMLMMEEEVVPDHYTFP--------FV------------------------L 135
+A +L M L E + T ++ L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 136 KACAHTFSLCEGKQVHAQLLK---LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
KAC+H +L GK H +++ ++ D + NSLI Y+ C L A +FQ +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEML--KLHDPDGYTMQSVISACAGLGALSLGMWA 250
S +WN ++ + + + EML H P+ T+ S++ A +G L G
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH-PNHITLASILPLFARVGNLQHGKEF 445
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMH 310
H Y++++ ++ +++ LVDMY K G + A++VF+ M RD ++ S+I G+
Sbjct: 446 HCYILRR--QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLE 370
GK E AL +F M + P+ +T V VLSAC+H +V EG F M + + RLE
Sbjct: 504 GKGEVALAWFKDMDR-SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 371 HYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFE 430
HY C+VDL+ RAG + +A ++ +P +P + + +LL AC + +GE A ++
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH-GNTNIGEWAADKLLL 621
Query: 431 IEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGD 490
G Y+LL+ +YA W+++ ++ L+SD GV K +L+E D G+
Sbjct: 622 ETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE----LDGE 677
Query: 491 TTHPKSED--IYKFLNEIDEKLESMG 514
P ++D I + + +E+L +G
Sbjct: 678 NNKPMNDDSVINQEQSSDEERLVEVG 703
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 178/387 (45%), Gaps = 43/387 (11%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L +++ +YS+ L+ A + + + WN LI +Y R+ + +++ +YK MM
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQ-ESVSVYKRMM-- 176
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
+ + D +T+P V+KACA G+ VH + + + +CN+LI Y G +
Sbjct: 177 -SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM------------------- 220
D+A ++F MSE+ VSWN +++ Y + A K+ M
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 221 LKLHDPDG-----------------YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
L+ + G M + + AC+ +GAL G H V++ C +
Sbjct: 296 LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHD 355
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
D + N+ L+ MY +C L A VF+++ +++WNSII GF+ + ++E + +
Sbjct: 356 IDNVRNS-LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET-SFLLKE 413
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
+ + F PN IT +L G + G + + + + + L + LVD++A++G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLLDA 410
I A + M K D V + SL+D
Sbjct: 474 EIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 16/230 (6%)
Query: 133 FVLKACAHTFSLC-------EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKI 185
FVL + A S C G+Q+HA + G E D+ + L+ FY+ LD A I
Sbjct: 81 FVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI 140
Query: 186 FQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGAL 244
+N + WNV++ SY+R F ++ V+ M+ K D +T SVI ACA L
Sbjct: 141 TENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDF 200
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSII 304
+ G H + + ++ V L+ MY + G +++A+++F+RM RD SWN+II
Sbjct: 201 AYGRVVHGSIEVSSHR---CNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAII 257
Query: 305 LGFSMHGKAEAALDYFFRM----VKIEKFVPNSITFVGVLSACNHRGMVN 350
++ K A RM V+ N+I G L A N+ G +N
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG-GCLEAGNYIGALN 306
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 238/506 (47%), Gaps = 50/506 (9%)
Query: 48 TIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKH 107
+I+ ++H L++ + ++ Y ++ A RLF + ++ WN +I Y S
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT-SEEKLG 267
Query: 108 QAIELYKAMMLMMEEEVVPDHYTFP--------FV------------------------L 135
+A +L M L E + T ++ L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 136 KACAHTFSLCEGKQVHAQLLK---LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
KAC+H +L GK H +++ ++ D + NSLI Y+ C L A +FQ +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEML--KLHDPDGYTMQSVISACAGLGALSLGMWA 250
S +WN ++ + + + EML H P+ T+ S++ A +G L G
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH-PNHITLASILPLFARVGNLQHGKEF 445
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMH 310
H Y++++ ++ +++ LVDMY K G + A++VF+ M RD ++ S+I G+
Sbjct: 446 HCYILRR--QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLE 370
GK E AL +F M + P+ +T V VLSAC+H +V EG F M + + RLE
Sbjct: 504 GKGEVALAWFKDMDR-SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLE 562
Query: 371 HYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFE 430
HY C+VDL+ RAG + +A ++ +P +P + + +LL AC + +GE A ++
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH-GNTNIGEWAADKLLL 621
Query: 431 IEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGD 490
G Y+LL+ +YA W+++ ++ L+SD GV K +L+E D G+
Sbjct: 622 ETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE----LDGE 677
Query: 491 TTHPKSED--IYKFLNEIDEKLESMG 514
P ++D I + + +E+L +G
Sbjct: 678 NNKPMNDDSVINQEQSSDEERLVEVG 703
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 178/387 (45%), Gaps = 43/387 (11%)
Query: 60 LYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLM 119
L +++ +YS+ L+ A + + + WN LI +Y R+ + +++ +YK MM
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQ-ESVSVYKRMM-- 176
Query: 120 MEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCL 179
+ + D +T+P V+KACA G+ VH + + + +CN+LI Y G +
Sbjct: 177 -SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 180 DMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM------------------- 220
D+A ++F MSE+ VSWN +++ Y + A K+ M
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 221 LKLHDPDG-----------------YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
L+ + G M + + AC+ +GAL G H V++ C +
Sbjct: 296 LEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHD 355
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRM 323
D + N+ L+ MY +C L A VF+++ +++WNSII GF+ + ++E + +
Sbjct: 356 IDNVRNS-LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET-SFLLKE 413
Query: 324 VKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG 383
+ + F PN IT +L G + G + + + + + L + LVD++A++G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 384 RIQEALNLVSEMPIKPDAVIWRSLLDA 410
I A + M K D V + SL+D
Sbjct: 474 EIIAAKRVFDSMR-KRDKVTYTSLIDG 499
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 16/230 (6%)
Query: 133 FVLKACAHTFSLC-------EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKI 185
FVL + A S C G+Q+HA + G E D+ + L+ FY+ LD A I
Sbjct: 81 FVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI 140
Query: 186 FQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGAL 244
+N + WNV++ SY+R F ++ V+ M+ K D +T SVI ACA L
Sbjct: 141 TENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDF 200
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSII 304
+ G H + + ++ V L+ MY + G +++A+++F+RM RD SWN+II
Sbjct: 201 AYGRVVHGSIEVSSHR---CNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAII 257
Query: 305 LGFSMHGKAEAALDYFFRM----VKIEKFVPNSITFVGVLSACNHRGMVN 350
++ K A RM V+ N+I G L A N+ G +N
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG-GCLEAGNYIGALN 306
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 52/429 (12%)
Query: 187 QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD----PDGYTMQSVISACAGLG 242
Q+ ++ +EV+ V+ +R + +++ + ++L D PD + +CA L
Sbjct: 195 QSPNQMNEVAPPPSVEEVMRLCQ----RRLYKDAIELLDKGAMPDRECFVLLFESCANLK 250
Query: 243 ALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNS 302
+L H + ++ D +N ++ M+ +C S+ A++VF+ M +D++SW+
Sbjct: 251 SLEHSKKVHDHFLQS---KFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHL 307
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
++ +S +G + AL F M K PN TF+ V AC G + E ++FD M E
Sbjct: 308 MMCAYSDNGMGDDALHLFEEMTK-HGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNE 366
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGE 422
+ + P+ EHY ++ + + G + EA + ++P +P A W ++ + + ++L +
Sbjct: 367 HGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYA-RLHGDIDLED 425
Query: 423 EMAKQVFEIEGSVCSGAYVLLSKLYASASR-WNEVGLLRKLMSDKGVTKKPGCSLIEIDG 481
M + + +++ S +++K+ + + E + VT K ++E
Sbjct: 426 YMEELMVDVDPSK-----AVINKIPTPPPKSFKETNM---------VTSK--SRILEFRN 469
Query: 482 VAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMG--YLPDYSGA-HLVDETIDGKKSTLRL 538
+ YK +E E G Y+PD H +D+ + K+ L
Sbjct: 470 LT---------------FYK--DEAKEMAAKKGVVYVPDTRFVLHDIDQ--EAKEQALLY 510
Query: 539 HSERLAIAFGLLNSRPGMPIRVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKD 598
HSERLAIA+G++ + P + + KNLRVC DCH K++S I +IVRD RFHHFKD
Sbjct: 511 HSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKD 570
Query: 599 GTCSCMDYW 607
G CSC DYW
Sbjct: 571 GKCSCGDYW 579
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 112 LYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIH 171
LYK + ++++ +PD F + ++CA+ SL K+VH L+ + D ++ N +I
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVIS 279
Query: 172 FYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYT 230
+ C + A ++F +M +K SW++M+ +Y G D AL +F EM K P+ T
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEET 339
Query: 231 MQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFE 290
+V ACA +G + + H MK + ++ ++ + KCG L A+Q
Sbjct: 340 FLTVFLACATVGGIEEA-FLHFDSMKN-EHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 291 RMPYRDV-NSWNSIILGFSMHG 311
+P+ + W ++ +HG
Sbjct: 398 DLPFEPTADFWEAMRNYARLHG 419
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 176/342 (51%), Gaps = 27/342 (7%)
Query: 272 LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
+++MY C S + A VF MP R+ +W ++I + +G+ E A+D F R ++ E P
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIE-EGNKP 207
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ F V AC G +NEGL++F+ M ++Y + +E Y ++++ A G + EAL+
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASA- 450
V M ++P +W +L++ C Q +ELG+ A+ L+ KL AS
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQ-GYLELGDRFAE---------------LIKKLDASRM 311
Query: 451 SRWNEVGLLRKLMSDKGVTKKPG---CSLIEIDGVA--HEFFAGDTTHPKSEDIYKFLNE 505
S+ + GL+ SD + K C +I D HEF AGDT+H + ++ L
Sbjct: 312 SKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLKV 371
Query: 506 IDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNLR 565
++ +G++P + V + K+ L S +LA A ++NS P+ V +N+R
Sbjct: 372 ---QMLDIGFVP-ATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMR 427
Query: 566 VCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
C D H K+IS I +I RD+ ++H +K+G CSC DYW
Sbjct: 428 TCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 69 SSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSAN-HKHQAIELYKAM--MLMMEE--- 122
SSL D+ L + SF+ + +YA+ N H+ IE + A+ + + E
Sbjct: 44 SSLQDV-----LTRPIWQNRSFVQCRRVSSYAQMVNNHQSVTIETFDALCKQVKIREALE 98
Query: 123 --EVVPDH---YTFPFVL---KACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA 174
+++ D FP +L K C +L E + VH + L D R +++I Y+
Sbjct: 99 VIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPL----DARSYHTVIEMYS 154
Query: 175 TCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQS 233
C D AL +F M +++ +W M+ + GE + A+ +F ++ + PD ++
Sbjct: 155 GCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKA 214
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
V AC +G ++ G+ + + ++ + VN +++M CG L+ A ERM
Sbjct: 215 VFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVN--VIEMLAACGHLDEALDFVERMT 272
Query: 294 YR-DVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
V W +++ + G E D F ++K
Sbjct: 273 VEPSVEMWETLMNLCWVQGYLELG-DRFAELIK 304
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 205/425 (48%), Gaps = 58/425 (13%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K IH L+ ++ F+ S ++ YS ++ A ++F G+ + ++N +I
Sbjct: 137 KMIHCLVLKF----SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISG 192
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKL- 157
YA ++ +A+ L K M L+ + PD T+ A FS ++ +++L+L
Sbjct: 193 YANNS-QADEALNLVKDMKLL---GIKPDVITW----NALISGFSHMRNEEKVSEILELM 244
Query: 158 ---GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
GY+ D VSW ++ V + + A
Sbjct: 245 CLDGYKPDV-------------------------------VSWTSIISGLVHNFQNEKAF 273
Query: 215 KVFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
F +ML H P+ T+ +++ AC L + G H Y + ++ V + L
Sbjct: 274 DAFKQMLT-HGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG---FVRSAL 329
Query: 273 VDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKI-EKFVP 331
+DMY KCG + A +F + P + ++NS+I ++ HG A+ A++ F +M EK
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKL-- 387
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ +TF +L+AC+H G+ + G F +M +Y + PRLEHY C+VDL RAG++ EA +
Sbjct: 388 DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEM 447
Query: 392 VSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
+ M ++PD +W +LL A C+ ++EL AK + E+E SG +LL+ LYA+A
Sbjct: 448 IKAMRMEPDLFVWGALL-AACRNHGNMELARIAAKHLAELEPE-NSGNGLLLTSLYANAG 505
Query: 452 RWNEV 456
W V
Sbjct: 506 SWESV 510
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 168/374 (44%), Gaps = 59/374 (15%)
Query: 62 SRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME 121
++++ +Y + A ++F K + +I A AR+ ++ ++++ ++ M +
Sbjct: 55 AKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQ-ESLDFFREMY---K 110
Query: 122 EEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDM 181
+ + D + P +LKA + GK +H +LK YESD I +SLI Y+ G +
Sbjct: 111 DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGN 170
Query: 182 ALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAG 240
A K+F ++ E+ V +N M+ Y + D AL + +M L PD T ++IS
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG--- 227
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSW 300
++H M+ +K +++L CL D Y DV SW
Sbjct: 228 --------FSH---MRNEEK--VSEILELMCL-DGYKP-----------------DVVSW 256
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
SII G + + E A D F +M+ PNS T + +L AC + G
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLT-HGLYPNSATIITLLPACTTLAYMKHG-------- 307
Query: 361 KE---YNVEPRLEHYG----CLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK 413
KE Y+V LE +G L+D++ + G I EA+ L + P K V + S++
Sbjct: 308 KEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP-KKTTVTFNSMIFCYAN 366
Query: 414 Q---DASVELGEEM 424
D +VEL ++M
Sbjct: 367 HGLADKAVELFDQM 380
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 44/271 (16%)
Query: 144 LCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDS 203
C G+ +HA L+ G TRI L+ FY CG + A K+F M ++ VM+ +
Sbjct: 32 FCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 204 YVRAGEFDTALKVFGEM----LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCD 259
R G + +L F EM LKL D + + S++ A L G H V+K
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKL---DAFIVPSLLKASRNLLDREFGKMIHCLVLK--- 145
Query: 260 KNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDY 319
+ +D + + L+DMY K G + A++VF + +D+ +N++I G++ + +A+ AL+
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALN- 204
Query: 320 FFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLF 379
+ +K+ P+ IT+ ++S +H M NE
Sbjct: 205 LVKDMKLLGIKPDVITWNALISGFSH--MRNE---------------------------- 234
Query: 380 ARAGRIQEALNLVSEMPIKPDAVIWRSLLDA 410
++ E L L+ KPD V W S++
Sbjct: 235 ---EKVSEILELMCLDGYKPDVVSWTSIISG 262
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 171/343 (49%), Gaps = 20/343 (5%)
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMV 324
DV +++MY C S++ A +VFE MP + + ++ F +G E A+D F R
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRF- 211
Query: 325 KIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
K E PN F V S C G V EG + F M +EY + P +EHY + + A +G
Sbjct: 212 KEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGH 271
Query: 385 IQEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLS 444
+ EALN V MP++P +W +L++ + VELG+ A+ V +++ + L
Sbjct: 272 LDEALNFVERMPMEPSVDVWETLMN-LSRVHGDVELGDRCAELVEKLDAT-------RLD 323
Query: 445 KLYASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAHEFFAGDTTHPKSEDIYKFLN 504
K+ ++ GL+ SD V K+P S F D++HP+ IY+ L
Sbjct: 324 KVSSA-------GLVATKASD-FVKKEP--STRSEPYFYSTFRPVDSSHPQMNIIYETLM 373
Query: 505 EIDEKLESMGYLPDYSGAHLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPIRVFKNL 564
+ +L+ MGY+PD + ++ K+ + E +A+ LL S+P I + N+
Sbjct: 374 SLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFG-YREEIAVVESLLKSKPRSAITLLTNI 432
Query: 565 RVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
R+ DCH + KL+S I ++I RD +H FK+G C C + W
Sbjct: 433 RIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 136 KACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEV 195
K C +L + VH ++ L D N++I Y+ C +D ALK+F+ M E +
Sbjct: 127 KLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSG 186
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYV 254
+ VM+ +V G + A+ +F + + P+G V S C G + G +
Sbjct: 187 TLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAM 246
Query: 255 MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKA 313
+ + + + + M G L+ A ERMP V+ W +++ +HG
Sbjct: 247 YR--EYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDV 304
Query: 314 E 314
E
Sbjct: 305 E 305
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 188/378 (49%), Gaps = 15/378 (3%)
Query: 35 MSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNT 94
M +K+IHA L+ D Q ++ + ++ L DL YA ++F + N+ W
Sbjct: 98 MRLIKRIHAMALKCFD----DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTA 153
Query: 95 LIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
+I Y + + +A L++ + + F +L C+ G+QVH +
Sbjct: 154 MIDGYLKYG-LEDEAFALFED--YVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM 210
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTAL 214
+K+G + + +SL++FYA CG L AL+ F M EK +SW ++ + R G A+
Sbjct: 211 VKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAI 269
Query: 215 KVFGEMLK-LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
+F ML P+ +T+ S++ AC+ AL G H+ V+K+ + DV V T L+
Sbjct: 270 GMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM---IKTDVFVGTSLM 326
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
DMY KCG + ++VF+ M R+ +W SII + G E A+ FR++K + N+
Sbjct: 327 DMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAIS-LFRIMKRRHLIANN 385
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+T V +L AC G + G + K ++E + LV L+ + G ++A N++
Sbjct: 386 LTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQ 444
Query: 394 EMPIKPDAVIWRSLLDAC 411
++P + D V W +++ C
Sbjct: 445 QLPSR-DVVSWTAMISGC 461
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 204/400 (51%), Gaps = 23/400 (5%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
+Q+H ++ + N L + S ++++Y+ +L A R F + + W +I A
Sbjct: 204 RQVHGNMVK-VGVGN----LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISA 258
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+R H +AI ++ + M+ +P+ +T +LKAC+ +L G+QVH+ ++K
Sbjct: 259 CSRKG-HGIKAIGMF---IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
++D + SL+ YA CG + K+F MS ++ V+W ++ ++ R G + A+ +F
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 219 EMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M + H + T+ S++ AC +GAL LG HA ++K ++ +V + + LV +YC
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK---NSIEKNVYIGSTLVWLYC 431
Query: 278 KCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
KCG A V +++P RDV SW ++I G S G ALD+ M++ E PN T+
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ-EGVEPNPFTYS 490
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
L AC + + G + K + + L+ ++A+ G + EA + MP
Sbjct: 491 SALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 398 KPDAVIWRSLL-----DACCKQDASVELGEEMAKQVFEIE 432
K + V W++++ + C++ +++L M + FE++
Sbjct: 550 K-NLVSWKAMIMGYARNGFCRE--ALKLMYRMEAEGFEVD 586
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 14/286 (4%)
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRA 207
K++HA LK + N+LI G L A K+F +M EK+ V+W M+D Y++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 208 GEFDTALKVFGEMLK--LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
G D A +F + +K + + +++ C+ LG H ++K +
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG----VGN 217
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
++V + LV Y +CG L A + F+ M +DV SW ++I S G A+ F M+
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
F+PN T +L AC+ + G ++ K ++ + L+D++A+ G I
Sbjct: 278 -HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEI 335
Query: 386 QEALNLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEI 431
+ + M + + V W S++ A ++ GEE A +F I
Sbjct: 336 SDCRKVFDGMSNR-NTVTWTSIIAAHAREG----FGEE-AISLFRI 375
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
K++HAQ ++ N +++ S ++ Y + A + + W +I
Sbjct: 405 KELHAQIIKNSIEKN----VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
+ S H+ +A++ K M+ +E V P+ +T+ LKACA++ SL G+ +H+ K
Sbjct: 461 CS-SLGHESEALDFLKEMI---QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH 516
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
S+ + ++LIH YA CG + A ++F +M EK+ VSW M+ Y R G ALK+
Sbjct: 517 ALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 219 EM-LKLHDPDGYTMQSVISACAGL 241
M + + D Y +++S C +
Sbjct: 577 RMEAEGFEVDDYIFATILSTCGDI 600
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 217/440 (49%), Gaps = 25/440 (5%)
Query: 39 KQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRA 98
KQ+H+ +++ ++ +F+ + ++ YYS+ DL+ + R F+ + + WN+++
Sbjct: 233 KQLHSLVVKSGWNISN---IFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
A + +++L+ M + P F L C+ + GKQ+H +LK+G
Sbjct: 290 CADYGS-VLDSLDLFSKMQFWGKR---PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMG 345
Query: 159 YE-SDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
++ S + ++LI Y C ++ + ++Q++ + N ++ S + G +++F
Sbjct: 346 FDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMF 405
Query: 218 GEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKC---DKNVAADVLVNTCLV 273
G M+ + D T+ +V+ A + LSL H+ + C AADV V+ L+
Sbjct: 406 GLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLI 461
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
D Y K G E++++VF+ + ++ SII G++ +G + M ++ +P+
Sbjct: 462 DAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRM-NLIPDE 520
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+T + VLS C+H G+V EG + FD + +Y + P + Y C+VDL RAG +++A L+
Sbjct: 521 VTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLL 580
Query: 394 EMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS---- 449
+ D V W SLL + C+ + +G A+ + +E Y+ +SK Y
Sbjct: 581 QARGDADCVAWSSLLQS-CRIHRNETIGRRAAEVLMNLEPEN-FAVYIQVSKFYFEIGDF 638
Query: 450 --ASRWNEVGLLRKLMSDKG 467
+ + E+ R+LM + G
Sbjct: 639 EISRQIREIAASRELMREIG 658
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 155/345 (44%), Gaps = 8/345 (2%)
Query: 53 NHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIEL 112
N ++ ++R + +L A F + +N LI +R +AIEL
Sbjct: 41 NPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYG-CSLRAIEL 99
Query: 113 YKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHF 172
Y M+ E TFP VL C+ EG QVH +++ LG+ + + ++L+
Sbjct: 100 YAEMVSCGLRESAS---TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGL 156
Query: 173 YATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTM 231
YA +D+ALK+F M +++ N+++ + + GE +V+ M L+ +G T
Sbjct: 157 YACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTY 216
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
+I C+ + G H+ V+K N+ +++ V LVD Y CG L + + F
Sbjct: 217 CYMIRGCSHDRLVYEGKQLHSLVVKS-GWNI-SNIFVANVLVDYYSACGDLSGSMRSFNA 274
Query: 292 MPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNE 351
+P +DV SWNSI+ + +G +LD F +M K P+ F+ L+ C+ +
Sbjct: 275 VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQS 333
Query: 352 GLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP 396
G + K L L+D++ + I+ + L +P
Sbjct: 334 GKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 200/481 (41%), Gaps = 109/481 (22%)
Query: 33 ITMSHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRL-FHHFGKPNSFM 91
+T L QIHAQ I + P+ + SRI+ + L +Y TRL F PN F+
Sbjct: 17 LTFPQLNQIHAQL---IVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFV 73
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
N++ + +++ + + + LY+ ++PD ++FP V+K+ G
Sbjct: 74 VNSMFKYFSK-MDMANDVLRLYEQRS---RCGIMPDAFSFPVVIKSAGRF-----GILFQ 124
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFD 211
A + KLG+ D + N ++ Y ++ A K+F +S++ WNVM+ Y + G +
Sbjct: 125 ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKE 184
Query: 212 TALKVFGEMLKLHDPDGYTM-----------------------QSVISACAGLGA----- 243
A K+F +M+ +D +T+ +SV+S A L
Sbjct: 185 EACKLF-DMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG 243
Query: 244 ------------LSLGMWAH----AYVMKKC-----------------DKNVAADVLVNT 270
L LG+ + V+ C +K V + V T
Sbjct: 244 FTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKT 303
Query: 271 CLVDMYCKC--------------------------------GSLEIAQQVFERMPYRDVN 298
L+DM+ KC G + A+Q+F+ MP R+V
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
SWNS+I G++ +G+A A+++F M+ P+ +T + VLSAC H + G D
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY 423
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQDASV 418
+ K ++ Y L+ ++AR G + EA + EM + D V + +L A V
Sbjct: 424 IRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYNTLFTAFAANGDGV 481
Query: 419 E 419
E
Sbjct: 482 E 482
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 156/342 (45%), Gaps = 47/342 (13%)
Query: 68 YSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPD 127
++ + DL A + F + + WN ++ YA++ A+ L+ M+ + V P+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG-FTEDALRLFNDMLRL---GVRPN 263
Query: 128 HYTFPFVLKACAHT---------FSLCEGKQV-------------HAQ----------LL 155
T+ V+ AC+ L + K+V HA+
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
+LG + + N++I Y G + A ++F M +++ VSWN ++ Y G+ A++
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 216 VFGEMLKLHD--PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLV 273
F +M+ D PD TM SV+SAC + L LG Y+ K + + L+
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN---QIKLNDSGYRSLI 440
Query: 274 DMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
MY + G+L A++VF+ M RDV S+N++ F+ +G L+ +M K E P+
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM-KDEGIEPDR 499
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCL 375
+T+ VL+ACN G++ EG F + P +HY C+
Sbjct: 500 VTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Query: 37 HLKQIHAQTLRTI-DTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTL 95
H K Q+ R I + + L ++ ++ Y+ + D++ A +LF K N WN+L
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 96 IRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLL 155
I YA + AIE ++ M+ + + PD T VL AC H L G + +
Sbjct: 369 IAGYAHNG-QAALAIEFFEDMIDYGDSK--PDEVTMISVLSACGHMADLELGDCIVDYIR 425
Query: 156 KLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALK 215
K + + SLI YA G L A ++F M E+ VS+N + ++ G+ L
Sbjct: 426 KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLN 485
Query: 216 VFGEMLKLH-DPDGYTMQSVISACAGLGALSLG 247
+ +M +PD T SV++AC G L G
Sbjct: 486 LLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEG 518
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 41/255 (16%)
Query: 226 PDGYTMQSVISACAGLGAL------SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
PD ++ VI + G L LG + YV +NV ++DMY K
Sbjct: 104 PDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYV-----RNV---------IMDMYVKH 149
Query: 280 GSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
S+E A++VF+++ R + WN +I G+ G E A F M+ V ++ G
Sbjct: 150 ESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK-LFDMMPENDVVSWTVMITGF 208
Query: 340 LSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---P 396
+ + YFD M E + + ++ +A+ G ++AL L ++M
Sbjct: 209 AKVKD----LENARKYFDRMP-----EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 397 IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYA------SA 450
++P+ W ++ AC + A L + K + E + L ++A SA
Sbjct: 260 VRPNETTWVIVISACSFR-ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 451 SR-WNEVGLLRKLMS 464
R +NE+G R L++
Sbjct: 319 RRIFNELGTQRNLVT 333
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
Query: 500 YKFLNEIDEKLESMGYLPDYSGA-HLVDETIDGKKSTLRLHSERLAIAFGLLNSRPGMPI 558
Y L + +++ GY+P+ H +DE + K+ L HSERLAIAFG++N+ PG I
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDE--EAKEKALMHHSERLAIAFGIINTPPGTTI 190
Query: 559 RVFKNLRVCSDCHKVTKLISSIYNVEIIVRDRARFHHFKDGTCSCMDYW 607
RV KNLR+C DCH K++SSI + EIIVRD RFHHF+DG CSC DYW
Sbjct: 191 RVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 186/404 (46%), Gaps = 34/404 (8%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
+P++ ++TL+ + +A+ L M+ M + PD T ++ +
Sbjct: 137 EPDTITFSTLVNGFCLEG-RVSEAVALVDRMVEMKQR---PDLVTVSTLINGLCLKGRVS 192
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMV 201
E + ++++ G++ D +++ G +AL +F+ M E+ S V +++++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 202 DSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKK--C 258
DS + G FD AL +F EM +K D T S+I G + G W M +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG-----GLCNDGKWDDGAKMLREMI 307
Query: 259 DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAE 314
+N+ DV+ + L+D++ K G L A++++ M R D ++NS+I GF
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 315 AALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGC 374
A F MV + P+ +T+ ++++ V++G+ F ++ + + P Y
Sbjct: 368 EANQMFDLMVS-KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNT 425
Query: 375 LVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQV 428
LV F ++G++ A L EM + P V + LLD C + ++E+ E+M K
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 429 FEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKP 472
++ G Y ++ +AS+ ++ L +SDKGV KP
Sbjct: 486 M----TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV--KP 523
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 182/457 (39%), Gaps = 93/457 (20%)
Query: 52 TNHPQALFLYSRILHYYS-SLADLNYATRLFHHFGK-------------------PNSFM 91
+N Q L + +LHY S + A L+Y RL + P
Sbjct: 13 SNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPID 72
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
+N L A AR+ + + K M L E D YT ++ L V
Sbjct: 73 FNRLCSAVARTKQY-DLVLGFCKGMELNGIEH---DMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE----VSWNVMVDSYVRA 207
+ KLGYE DT ++L++ + G + A+ + M E + V+ + +++
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 208 GEFDTALKVFGEMLKL-HDPDGYTMQSVISAC--AGLGALSLGMWAHAYVMKKCDKNVAA 264
G AL + M++ PD T V++ +G AL+L ++ K ++N+ A
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR-----KMEERNIKA 243
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYF 320
V+ + ++D CK GS + A +F M + DV +++S+I G GK +
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 321 FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
M+ +P+ +TF L+D+F
Sbjct: 304 REMIG-RNIIPDVVTF------------------------------------SALIDVFV 326
Query: 381 RAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCS 437
+ G++ EA L +EM I PD + + SL+D CK++ E A Q+F++ V
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE-----ANQMFDL--MVSK 379
Query: 438 G------AYVLLSKLYASASRWNEVGLLRKLMSDKGV 468
G Y +L Y A R ++ L + +S KG+
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 160/356 (44%), Gaps = 27/356 (7%)
Query: 79 RLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKAC 138
R+ + +P+ + ++ +S N A++L++ M E + + V+ +
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNS-ALALDLFRKME---ERNIKASVVQYSIVIDSL 255
Query: 139 AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS----E 194
S + + ++ G ++D +SLI G D K+ + M ++
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGAL-SLGMWAHA 252
V+++ ++D +V+ G+ A +++ EM+ + PD T S+I L
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 253 YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFS 308
V K C+ D++ + L++ YCK ++ ++F + + + ++N+++LGF
Sbjct: 376 MVSKGCE----PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFVGVL--SACNHRGMVNEGLMYFDMMTKEYNVE 366
GK AA + F MV + VP S+ G+L C++ G +N+ L F+ M K +
Sbjct: 432 QSGKLNAAKELFQEMV--SRGVPPSVVTYGILLDGLCDN-GELNKALEIFEKMQKS-RMT 487
Query: 367 PRLEHYGCLVDLFARAGRIQEALNL---VSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ Y ++ A ++ +A +L +S+ +KPD V + ++ CK+ + E
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 149/365 (40%), Gaps = 22/365 (6%)
Query: 46 LRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYAR 101
R ++ N ++ YS ++ + A LF+ K + +++LI
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 102 SANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYES 161
A K + M+ ++PD TF ++ L E K+++ +++ G
Sbjct: 293 DGKWDDGA----KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 162 DTRICNSLIHFYATCGCLDMALKIFQNM----SEKSEVSWNVMVDSYVRAGEFDTALKVF 217
DT NSLI + CL A ++F M E V+++++++SY +A D +++F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 218 GEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
E+ K P+ T +++ G L+ A + + V V+ L+D
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLN---AAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 277 CKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
C G L A ++FE+M + +N II G K + A F + + P+
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD-KGVKPD 524
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+T+ ++ +G ++E M F M KE P Y L+ + ++ L+
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583
Query: 393 SEMPI 397
EM +
Sbjct: 584 EEMKV 588
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 152/332 (45%), Gaps = 58/332 (17%)
Query: 148 KQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSE----KSEVSWNVMVDS 203
K++ GY + ++LI Y G + A+ +F +M E + V++N ++D+
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 204 YVRAG-EFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVM--KKCD 259
+ G EF K F EM + PD T S+++ C+ G+W A + + +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS-----RGGLWEAARNLFDEMTN 367
Query: 260 KNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEA 315
+ + DV L+D CK G +++A ++ +MP + +V S++++I GF+ G+ +
Sbjct: 368 RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 316 ALDYFFRM----VKIEKFVPNS------------------------------ITFVGVLS 341
AL+ F M + +++ N+ +T+ +L
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IK 398
+G +E F M +E+ V P L Y L+D +++ G +EA+ + E ++
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 399 PDAVIWRSLLDACCKQ---DASVELGEEMAKQ 427
D V++ +L+DA CK ++V L +EM K+
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 53/336 (15%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
+PN +N +I A + Q + + M V PD TF +L C+
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ---RNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMV 201
+ + ++ E D N+L+ G +D+A +I M K + VS++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 202 DSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
D + +AG FD AL +FGEM L
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYL-------------------------------------G 439
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY----RDVNSWNSIILGFSMHGKAEAAL 317
+A D + L+ +Y K G E A + M +DV ++N+++ G+ GK +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 318 DYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVD 377
F M K E +PN +T+ ++ + G+ E + F K + + Y L+D
Sbjct: 500 KVFTEM-KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSAGLRADVVLYSALID 557
Query: 378 LFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDA 410
+ G + A++L+ EM I P+ V + S++DA
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 156/354 (44%), Gaps = 49/354 (13%)
Query: 90 FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQ 149
F +NTL+ A + Q ++ + M + ++P+ ++ V+ A E
Sbjct: 375 FSYNTLLDAICKGG----QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS----EKSEVSWNVMVDSYV 205
+ ++ LG D N+L+ Y G + AL I + M+ +K V++N ++ Y
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 206 RAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA- 263
+ G++D KVF EM + H P+ T ++I G G++ A + + K+
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLID-----GYSKGGLYKEAMEIFREFKSAGL 545
Query: 264 -ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMHGKAEAALD 318
ADV++ + L+D CK G + A + + M ++ ++NSII F + + D
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 319 YFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYN------VEPRLEHY 372
Y +P S + + L+ N + F +T E N E ++
Sbjct: 606 Y-----SNGGSLPFSSSALSALTETEG----NRVIQLFGQLTTESNNRTTKDCEEGMQEL 656
Query: 373 GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCK----QDASVELGE 422
C++++F + + ++ IKP+ V + ++L+AC + +DAS+ L E
Sbjct: 657 SCILEVFRK----------MHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 270 TCLVDMYCKCGSLEIAQQVFERM---PYRD-VNSWNSIILGFSMHGKAEAALDYFFRMVK 325
+ ++ + G + IA+++FE Y + V +++++I + G E A+ F M K
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM-K 295
Query: 326 IEKFVPNSITFVGVLSACNHRGM-VNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGR 384
PN +T+ V+ AC GM + +FD M + V+P + L+ + +R G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGGL 354
Query: 385 IQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQ--VFEIEGSVCSGA 439
+ A NL EM I+ D + +LLDA CK ++L E+ Q V I +V S
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICK-GGQMDLAFEILAQMPVKRIMPNVVS-- 411
Query: 440 YVLLSKLYASASRWNEV 456
Y + +A A R++E
Sbjct: 412 YSTVIDGFAKAGRFDEA 428
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 196/473 (41%), Gaps = 71/473 (15%)
Query: 58 LFLYSRILHYYSSLADLNYATRLF----HHFGKPNSFMWNTLIRAYARSANHKHQAIELY 113
L YS ++ Y L +LF H K + ++++ I Y +S + ++ +Y
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV-VY 379
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
K M+ + + P+ T+ ++K + E ++ Q+LK G E +SLI +
Sbjct: 380 KRMLC---QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 174 ATCGCLDMALKIFQNMSEK---------------------------------------SE 194
CG L ++++M + +
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEMLKLH--DPDGYTMQSVISACAGLGAL------SL 246
V +N ++D + R FD ALKVF ++ ++ PD T +V+ A ++
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP----YRDVNSWNS 302
G+ + + ++AD+ V ++ + KC +E A + F + D+ ++N+
Sbjct: 556 GLQLFDLMQR---NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
+I G+ + + A + F ++K+ F PN++T ++ ++ + F +M E
Sbjct: 613 MICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-E 670
Query: 363 YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVE 419
+P YGCL+D F+++ I+ + L EM I P V + ++D CK+ V+
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR-GRVD 729
Query: 420 LGEEMAKQVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKP 472
+ Q + + AY +L + Y R E LL + M GV KP
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV--KP 780
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 148/328 (45%), Gaps = 30/328 (9%)
Query: 53 NHPQALFLYSRILHYYSS----LADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQ 108
+P + +Y ++ S L + ++ ++ + N ++N+LI + R N +
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR-LNRFDE 514
Query: 109 AIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE------GKQVHAQLLKLGYESD 162
A+++++ LM + PD TF V++ + C+ G Q+ + + +D
Sbjct: 515 ALKVFR---LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 163 TRICNSLIHFYATCGCLDMALKIFQNMSE-KSE---VSWNVMVDSYVRAGEFDTALKVFG 218
+CN +IH C ++ A K F N+ E K E V++N M+ Y D A ++F
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF- 630
Query: 219 EMLKL--HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
E+LK+ P+ T+ +I + + + + +K K + + CL+D +
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK---PNAVTYGCLMDWF 687
Query: 277 CKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
K +E + ++FE M + ++ S++ II G G+ + A + F + + K +P+
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID-AKLLPD 746
Query: 333 SITFVGVLSA-CNHRGMVNEGLMYFDMM 359
+ + ++ C +V L+Y M+
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHML 774
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 57/278 (20%)
Query: 168 SLIHFYATCGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
+LI+ + G +D A +F+ M ++ ++++ ++D Y +AG K+F + L
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH- 349
Query: 224 HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLE 283
K V DV+V + +D+Y K G L
Sbjct: 350 ------------------------------------KGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 284 IAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
A V++RM + +V ++ +I G G+ A + +++K P+ +T+ +
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSL 432
Query: 340 LSACNHRGMVNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM--- 395
+ G + G +Y DM+ Y P + YG LVD ++ G + A+ +M
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGY--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEG 433
I+ + V++ SL+D C+ + E A +VF + G
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDE-----ALKVFRLMG 523
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 159/358 (44%), Gaps = 32/358 (8%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEE-VVPDHYTFPFVLKACAHTFSLC 145
P +N L A A++ + EL A+ ME + + YT ++ L
Sbjct: 86 PTVIDFNRLFSAIAKTKQY-----ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSE----KSEVSWNVMV 201
+++KLGYE DT I N+L++ + AL++ M E + ++ N +V
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200
Query: 202 DSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK 260
+ G+ A+ + M++ P+ T V++ G +L M + K ++
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM---ELLRKMEER 257
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAA 316
N+ D + + ++D CK GSL+ A +F M + D+ ++N++I GF G+ +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 317 LDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEY---NVEPRLEHYG 373
M+K K PN +TF ++ + G + E D + KE + P Y
Sbjct: 318 AKLLRDMIK-RKISPNVVTFSVLIDSFVKEGKLREA----DQLLKEMMQRGIAPNTITYN 372
Query: 374 CLVDLFARAGRIQEALNLVSEMPIK---PDAVIWRSLLDACCKQ---DASVELGEEMA 425
L+D F + R++EA+ +V M K PD + + L++ CK D +EL EM+
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 173/419 (41%), Gaps = 61/419 (14%)
Query: 44 QTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAY 99
+ LR ++ N YS I+ L+ A LF+ K + +NTLI +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
+ A K + M++ ++ P+ TF ++ + L E Q+ ++++ G
Sbjct: 309 CNAGRWDDGA----KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALK 215
+T NSLI + L+ A+++ M K +++N++++ Y +A D L+
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 216 VFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
+F EM +++ VI A V NT LV
Sbjct: 425 LFREM---------SLRGVI---------------------------ANTVTYNT-LVQG 447
Query: 276 YCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
+C+ G LE+A+++F+ M R D+ S+ ++ G +G+ E AL+ F ++ K + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
I + + CN + + ++ + K ++ R Y ++ R + +A L
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR--AYNIMISELCRKDSLSKADIL 565
Query: 392 VSEMPIK---PDAVIWRSLLDACCKQD---ASVELGEEMAKQVFEIEGSVCSGAYVLLS 444
+M + PD + + L+ A D + EL EEM F + S +LS
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 144/302 (47%), Gaps = 25/302 (8%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG----CLDMA 182
D Y+F ++ L V +++KLGYE SL+H + +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 183 LKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGL 241
+ + ++ E + V +N ++D + GE + AL++ EM K D T ++++
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT----- 219
Query: 242 GALSLGMWAHAYVMKK--CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN- 298
G G W+ A M + +++ DV+ T L+D++ K G+L+ AQ++++ M V+
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 299 ---SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA-CNHRGMVNEGLM 354
++NSII G MHG+ A F M F PN +T+ ++S C R MV+EG+
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF-PNVVTYNTLISGFCKFR-MVDEGMK 337
Query: 355 YFDMMTKE-YNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDA 410
F M+ E +N + + Y L+ + + G+++ AL++ M + PD + LL
Sbjct: 338 LFQRMSCEGFNAD--IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 411 CC 412
C
Sbjct: 396 LC 397
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 27/259 (10%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
P+ + LI + + N +A ELYK M+ + V P++ T+ ++ L
Sbjct: 243 NPDVVTFTALIDVFVKQGNLD-EAQELYKEMI---QSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS----EKSEVSWNVMV 201
+ K+ + G + N+LI + +D +K+FQ MS ++N ++
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 202 DSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSL-GMWAHAYV----M 255
Y + G+ AL +F M+ PD +I+ C L L + G A V M
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPD------IITHCILLHGLCVNGEIESALVKFDDM 412
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHG 311
++ +K + ++ ++ CK +E A ++F R+P D ++ +ILG +G
Sbjct: 413 RESEKYIG--IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 312 KAEAALDYFFRMVKIEKFV 330
A D R +K E +
Sbjct: 471 PRREA-DELIRRMKEEGII 488
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 162/375 (43%), Gaps = 30/375 (8%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELY 113
L+ YS ++Y+ + L+ A + K P+ N+L+ + N +A+ L
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCH-GNRISEAVALV 168
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
M+ M + PD TF ++ E + +++ G + D ++I+
Sbjct: 169 DQMVEMGYQ---PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 174 ATCGCLDMALKIFQNMS----EKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDG 228
G D+AL + M E V +N ++D + D A +F +M K PD
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 229 YTMQSVISACAGLGALSLGMWAHA--YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
+T +IS + G W+ A + +KN+ D++ L+D + K G L A+
Sbjct: 286 FTYNPLISCLC-----NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 287 QVFERMP-----YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
++++ M + DV ++N++I GF + + E ++ F M + V N++T+ ++
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYTTLIH 399
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IK 398
+ M F M + V P + Y L+D G ++ AL + M +K
Sbjct: 400 GFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 399 PDAVIWRSLLDACCK 413
D V + ++++A CK
Sbjct: 459 LDIVTYTTMIEALCK 473
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 46/275 (16%)
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISA-CAG------------- 240
++++ ++ + R + AL + G+M+KL + P T+ S+++ C G
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 241 -----------LGALSLGMWAH-------AYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
L G++ H A V + K D++ +++ CK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 283 EIAQQVFERMPY----RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVG 338
++A + +M DV +N+II G + + A D F +M + + P+ T+
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNP 290
Query: 339 VLSA-CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI 397
++S CN+ + + DM+ K N+ P L + L+D F + G++ EA L EM
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEK--NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 398 K----PDAVIWRSLLDACCKQDASVELGEEMAKQV 428
PD V + +L+ CK VE G E+ +++
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKY-KRVEEGMEVFREM 382
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 132/322 (40%), Gaps = 58/322 (18%)
Query: 86 KPNSFMWNTLIRA---YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTF 142
KP+ F +N LI Y R ++ + + M+E+ + PD F ++ A
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDAS-------RLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 143 SLCEGKQVHAQLLKLGY-ESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSW 197
L E ++++ +++K + D N+LI + ++ +++F+ MS++ + V++
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Query: 198 NVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKK 257
++ + +A + D A VF +M+ DG
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVS----DG----------------------------- 421
Query: 258 CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMHGKA 313
V D++ L+D C G++E A VFE M RD+ ++ ++I GK
Sbjct: 422 ----VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 314 EAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYG 373
E D F + ++ PN +T+ ++S +G+ E F M KE P Y
Sbjct: 478 EDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM-KEDGPLPNSGTYN 535
Query: 374 CLVDLFARAGRIQEALNLVSEM 395
L+ R G + L+ EM
Sbjct: 536 TLIRARLRDGDEAASAELIKEM 557
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 193/464 (41%), Gaps = 63/464 (13%)
Query: 60 LYSRILHYYSSLADLNYAT----RLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKA 115
++S + Y DL A+ R+ PN + LI+ + ++A +Y
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG-RIYEAFGMYGQ 416
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
++ + + P T+ ++ +L G ++ ++K+GY D I L+ +
Sbjct: 417 IL---KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 176 CGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKLH--DPDGY 229
G + A++ M +S V +N ++D + R FD ALKVF ++ ++ PD
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVA 532
Query: 230 TMQSVISACAGLGALSLGMW-------------AHAY---------------------VM 255
T +V+ G L ++ A AY +M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY----RDVNSWNSIILGFSMHG 311
++ ++AD+ V ++ + KC +E A + F + D+ ++N++I G+
Sbjct: 593 QR--NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH 371
+ + A + F ++K+ F PN++T ++ ++ + F +M E +P
Sbjct: 651 RLDEA-ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVT 708
Query: 372 YGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQV 428
YGCL+D F+++ I+ + L EM I P V + ++D CK+ V+ + Q
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR-GRVDEATNIFHQA 767
Query: 429 FEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKP 472
+ + AY +L + Y R E LL + M GV KP
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV--KP 809
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 57/278 (20%)
Query: 168 SLIHFYATCGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKL 223
+LI+ + G +D A +F+ M ++ ++++ ++D Y +AG K+F + L
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH- 349
Query: 224 HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLE 283
K V DV+V + +D+Y K G L
Sbjct: 350 ------------------------------------KGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 284 IAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGV 339
A V++RM + +V ++ +I G G+ A + +++K P+ +T+ +
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSL 432
Query: 340 LSACNHRGMVNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM--- 395
+ G + G +Y DM+ Y P + YG LVD ++ G + A+ +M
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGY--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 396 PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEG 433
I+ + V++ SL+D C+ + E A +VF + G
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDE-----ALKVFRLMG 523
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 166/367 (45%), Gaps = 24/367 (6%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMM--L 118
Y +++ + ++ A LF+ KP ++NTLI + H ++ KA++ +
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV-----THGRLDDAKAVLSDM 379
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
+ +VPD T+ ++ + +V + G + + L+ + G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 179 LDMALKIFQNMS----EKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQS 233
+D A + MS + + V +N ++ ++ + A+++F EM K PD YT S
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
+IS + + +W + + V A+ + L++ + + G ++ A+++ M
Sbjct: 500 LISGLCEVDEIKHALW---LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 294 YR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMV 349
++ D ++NS+I G G+ + A F +M++ + P++I+ +++ GMV
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR-DGHAPSNISCNILINGLCRSGMV 615
Query: 350 NEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRS 406
E + + M + P + + L++ RAGRI++ L + ++ I PD V + +
Sbjct: 616 EEAVEFQKEMVLRGST-PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 407 LLDACCK 413
L+ CK
Sbjct: 675 LMSWLCK 681
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 17/261 (6%)
Query: 179 LDMALKIFQNMSE----KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQS 233
+D AL + ++M++ + V + ++ S + + AL++ EM + PD T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
VI GL A V + + A D + L++ CK G ++ A+ +F R+P
Sbjct: 293 VI---LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 294 YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
++ +N++I GF HG+ + A MV VP+ T+ ++ G+V L
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 354 -MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLD 409
+ DM K +P + Y LVD F + G+I EA N+++EM +KP+ V + L+
Sbjct: 410 EVLHDMRNK--GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 410 ACCKQ---DASVELGEEMAKQ 427
A CK+ +VE+ EM ++
Sbjct: 468 AFCKEHRIPEAVEIFREMPRK 488
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 21/283 (7%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KPN + + L+ + + + E Y + M + + P+ F ++ A +
Sbjct: 421 KPNVYSYTILVDGFCKLG----KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMV 201
E ++ ++ + G + D NSLI + AL + ++M + + V++N ++
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 202 DSYVRAGEFDTALKVFGEMLKLHDP-DGYTMQSVISACAGLGALSLGMWAHAYVMKK--C 258
++++R GE A K+ EM+ P D T S+I G + +++
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 259 DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAE 314
N++ ++L+N C+ G +E A + + M R D+ ++NS+I G G+ E
Sbjct: 597 PSNISCNILING-----LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 315 AALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFD 357
L FR ++ E P+++TF ++S G V + + D
Sbjct: 652 DGLT-MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 167/352 (47%), Gaps = 29/352 (8%)
Query: 79 RLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEE-EVVPDHYTFPFVLKA 137
R+ +P+ F + T++ + + I+L +++ ME+ ++ D + ++ A
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGD-----IDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 138 CAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----S 193
+ ++ + + ++ G + NSLI G A ++ +M E+ +
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 194 EVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHA 252
V+++ ++D++V+ G+ A K++ EM+K DPD +T S+I+ L H
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA--KHM 382
Query: 253 Y---VMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIIL 305
+ + K C NV V NT L+ +CK +E ++F M R + ++N++I
Sbjct: 383 FELMISKDCFPNV---VTYNT-LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G G + A F +MV + P+ IT+ +L G + + L+ F+ + K +
Sbjct: 439 GLFQAGDCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KM 496
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNL---VSEMPIKPDAVIWRSLLDACCKQ 414
EP + Y +++ +AG++++ +L +S +KP+ +I+ +++ C++
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 162/357 (45%), Gaps = 26/357 (7%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
P+ +N L+ A A+ N I L + M + + D Y++ ++ L
Sbjct: 78 PSIVEFNKLLSAIAK-MNKFDLVISLGERMQNL---RISYDLYSYNILINCFCRRSQLPL 133
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM----SEKSEVSWNVMVD 202
V +++KLGYE D +SL++ Y + A+ + M + + V++N ++
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 203 SYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK- 260
+ A+ + M+ + PD +T +V++ G + L + ++KK +K
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS----LLKKMEKG 249
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAA 316
+ ADV++ T ++D C ++ A +F M + +V ++NS+I +G+ A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 317 LDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLV 376
M++ K PN +TF ++ A G + E +D M K +++P + Y L+
Sbjct: 310 SRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLI 367
Query: 377 DLFARAGRIQEALNLVSEMPIK---PDAVIWRSLLDACCKQ---DASVELGEEMAKQ 427
+ F R+ EA ++ M K P+ V + +L+ CK + +EL EM+++
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 165/408 (40%), Gaps = 81/408 (19%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRA---YARSANHKHQAI 110
+ +Y+ I+ + ++N A LF +PN +N+LIR Y R ++
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS---- 310
Query: 111 ELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLI 170
+ + M+E ++ P+ TF ++ A L E ++++ +++K + D +SLI
Sbjct: 311 ---RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 171 HFYATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP 226
+ + LD A +F+ M K + V++N ++ + +A + +++F EM
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM------ 421
Query: 227 DGYTMQSVISACAGLGALSLGMW-------AHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
+ + ++ L G++ A K V D++ + L+D CK
Sbjct: 422 ---SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 280 GSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
G LE A VFE + D+ ++N +I G GK E D F S++
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC-----------SLS 527
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
GV +P + Y ++ F R G +EA L EM
Sbjct: 528 LKGV--------------------------KPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 396 P---IKPDAVIWRSLLDACCK---QDASVELGEEMAKQVFEIEGSVCS 437
P++ + +L+ A + + AS EL +EM F + S S
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 167/401 (41%), Gaps = 69/401 (17%)
Query: 167 NSLIHFYATCGCLDMALKI---FQNMSEKSEV-SWNVMVDSYVRAGEFDTALKVFGEMLK 222
N L+ A D+ + + QN+ ++ S+N++++ + R + AL V G+M+K
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 223 L-HDPDGYTMQSVISA-CAG------------------------LGALSLGMWAH----- 251
L ++PD T+ S+++ C G L G++ H
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203
Query: 252 --AYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY----RDVNSWNSIIL 305
A + + + D+ +V+ CK G +++A + ++M DV + +II
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA-CNHRGMVNEGLMYFDMMTKEYN 364
+ AL+ F M + PN +T+ ++ CN+ + + DM+ ++ N
Sbjct: 264 ALCNYKNVNDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 365 VEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQDASVELG 421
P + + L+D F + G++ EA L EM I PD + SL++ C D E
Sbjct: 323 --PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE-- 378
Query: 422 EEMAKQVFEIEGSV-CSG---AYVLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCSLI 477
AK +FE+ S C Y L K + A R E L + MS +G+
Sbjct: 379 ---AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 478 EIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEKLESMGYLPD 518
I G+ F AGD ++ I+K K+ S G PD
Sbjct: 436 LIQGL---FQAGDCDM--AQKIFK-------KMVSDGVPPD 464
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 153/356 (42%), Gaps = 21/356 (5%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KP +N ++ + + ++ L + M + + PD YT+ ++ C
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMK---SDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS----EKSEVSWNVMV 201
E QV ++ G+ D N+L+ Y A+K+ M S V++N ++
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 202 DSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK 260
+Y R G D A+++ +M K PD +T +++S G + M + + +
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM---SIFEEMRNA 413
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY----RDVNSWNSIILGFSMHGKAEAA 316
++ + MY G ++F+ + D+ +WN+++ F +G ++
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG-MDSE 472
Query: 317 LDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLV 376
+ F+ +K FVP TF ++SA + G + + + M + V P L Y ++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVL 531
Query: 377 DLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQVF 429
AR G +++ +++EM KP+ + + SLL A + L +A++V+
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVY 586
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 157/381 (41%), Gaps = 49/381 (12%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYARSANHKHQAIELY 113
+F Y+ +L + + A +F KPN +N I+ Y +
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK--------F 435
Query: 114 KAMMLMMEEEVV----PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSL 169
MM + +E V PD T+ +L E V ++ + G+ + N+L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 170 IHFYATCGCLDMALKIFQNMSEKSEV----SWNVMVDSYVRAGEFDTALKVFGEMLKLHD 225
I Y+ CG + A+ +++ M + ++N ++ + R G ++ + KV EM
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM----- 550
Query: 226 PDGYTMQSVISACAGLGALSLGM---WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSL 282
DG + ++ C+ L A + G H+ + + ++ LV + KC L
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 283 EIAQQVFERMPYR----DVNSWNSIILGFS---MHGKAEAALDYFFRMVKIEKFVPNSIT 335
A++ F + R D+ + NS++ + M KA LDY +K F P+ T
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY----MKERGFTPSMAT 666
Query: 336 FVGVL---SACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+ ++ S G E L +++ K ++P + Y ++ + R R+++A +
Sbjct: 667 YNSLMYMHSRSADFGKSEEILR--EILAK--GIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 393 SEM---PIKPDAVIWRSLLDA 410
SEM I PD + + + + +
Sbjct: 723 SEMRNSGIVPDVITYNTFIGS 743
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 164/408 (40%), Gaps = 41/408 (10%)
Query: 36 SHLKQIHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFM 91
SH + + L + ++ Y+ ++ Y+ L+ A L + KP+ F
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
+ TL+ + R A A+ +++ M P+ TF +K + E ++
Sbjct: 387 YTTLLSGFER-AGKVESAMSIFEEMR---NAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEV----SWNVMVDSYVRA 207
++ G D N+L+ + G +F+ M V ++N ++ +Y R
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 208 GEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHA--YVMKKCDKNVAA 264
G F+ A+ V+ ML PD T +V++A A GMW + + + D
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA-----RGGMWEQSEKVLAEMEDGRCKP 557
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGF--------SMHGKAEAA 316
+ L L+ Y + + + E + Y V +++L + +AE A
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEV-YSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 317 LDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLV 376
F +K F P+ T ++S R MV + D M KE P + Y L+
Sbjct: 617 ----FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM-KERGFTPSMATYNSLM 671
Query: 377 DLFARA---GRIQEALNLVSEMPIKPDAVIWRSLLDACCK----QDAS 417
+ +R+ G+ +E L + IKPD + + +++ A C+ +DAS
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 163/400 (40%), Gaps = 61/400 (15%)
Query: 44 QTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYARSA 103
+ L+ + T+ +Y+ +LH + A L +PN +N LI AY
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQ 262
Query: 104 NHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDT 163
+ L K L VPD T V++ + + E +V ++ G + D
Sbjct: 263 KLIQSMVLLEKCFSL----GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 164 RICNSLIHFYATCGCLDMALKIFQNMSEKSEV----SWNVMVDSYVRAGEFDTALKVFGE 219
CN+L+ Y G + +A + F M K + ++N+++ Y G D+AL F +
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND 378
Query: 220 MLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
M D + + + GL S+G
Sbjct: 379 MKT--DAIRWNFATFNTLIRGL---SIG-------------------------------- 401
Query: 280 GSLEIAQQVFERMPYRD------VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
G + ++ E M D ++ +N +I GF + E AL++ +M EK P +
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM---EKLFPRA 458
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
+ L + +G +++ +D M E V P + CL+ +++ G+I+E+L L++
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV-PSIIVSHCLIHRYSQHGKIEESLELIN 517
Query: 394 EMPIK---PDAVIWRSLLDACCKQDA---SVELGEEMAKQ 427
+M + P + + +++ CKQD ++ E+MA++
Sbjct: 518 DMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER 557
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 160/354 (45%), Gaps = 26/354 (7%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFG-KPNSFMWNTLIRAYARSANHKHQAIELYKAMM 117
F +R++ S+ DL FG KP+ ++N+++ + + I++ +
Sbjct: 122 FGRARLIKRVISVVDL------VSKFGIKPSLKVFNSILDVLVK------EDIDIAREFF 169
Query: 118 L--MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
MM + D YT+ ++K + T + +G ++ + G + + N+L+H
Sbjct: 170 TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK 229
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSV 234
G + A + M E ++V++N+++ +Y + ++ + + L PD T+ V
Sbjct: 230 NGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKV 289
Query: 235 ISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVF---ER 291
+ G +S + V K K DV+ LV YC G + +AQ+ F ER
Sbjct: 290 MEVLCNEGRVSEALEVLERVESKGGK---VDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 292 MPY-RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN 350
Y +V ++N +I G+ G ++ALD F M K + N TF ++ + G +
Sbjct: 347 KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM-KTDAIRWNFATFNTLIRGLSIGGRTD 405
Query: 351 EGLMYFDMMTKEYNVE-PRLEHYGCLVDLFARAGRIQEALNLVSEM-PIKPDAV 402
+GL +MM V R++ Y C++ F + R ++AL + +M + P AV
Sbjct: 406 DGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV 459
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 196/445 (44%), Gaps = 32/445 (7%)
Query: 61 YSRILHYYSSLADLNYATRLFHHF-GK---PNSFMWNTLIRAYARSANHKHQAIELYKAM 116
Y+ ++ YSS + A L + GK P + +NT+I + ++ +A E++ M
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE-RAKEVFAEM 331
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
+ + PD T+ +L + E ++V + + D +S++ +
Sbjct: 332 L---RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 177 GCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQ 232
G LD AL F ++ E V + +++ Y R G A+ + EML+ G M
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ----QGCAMD 444
Query: 233 SVI--SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFE 290
V + GL + A + ++ + D T L+D +CK G+L+ A ++F+
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 291 RMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHR 346
+M + DV ++N+++ GF G + A + + MV E +P I++ +++A +
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE-ILPTPISYSILVNALCSK 563
Query: 347 GMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVI 403
G + E +D M + N++P + ++ + R+G + + + +M PD +
Sbjct: 564 GHLAEAFRVWDEMISK-NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 404 WRSLLDACCKQD-ASVELGEEMAKQVFEIEGSVCSGAYVLLSKL--YASASRWNEVGLLR 460
+ +L+ +++ S G + K++ E +G + + S L + ++ E ++
Sbjct: 623 YNTLIYGFVREENMSKAFG--LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 461 KLMSDKGVTKKPGCSLIEIDGVAHE 485
+ M ++GV I+G +
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQ 705
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 148/357 (41%), Gaps = 32/357 (8%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELY 113
L +S ++ ++ +L+ A F+ + P++ ++ LI+ Y R +
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG-------MIS 427
Query: 114 KAMML---MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLI 170
AM L M+++ D T+ +L L E ++ ++ + D+ LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 171 HFYATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLK---L 223
+ G L A+++FQ M EK V++N ++D + + G+ DTA +++ +M+ L
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 224 HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLE 283
P Y++ G A + +W KN+ V++ ++ YC+ G+
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEM-----ISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 284 IAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK-FVPNSITFVG 338
+ E+M D S+N++I GF A +M + + VP+ T+
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 339 VLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
+L + + E + M E V P Y C+++ F + EA + EM
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMI-ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 132/308 (42%), Gaps = 47/308 (15%)
Query: 131 FPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
F +++ L E + L G+ CN+LI G +++A ++Q +S
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 191 EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWA 250
+S V NV YT+ +++A G +
Sbjct: 228 -RSGVGINV-----------------------------YTLNIMVNALCKDGKME---KV 254
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILG 306
++ + +K V D++ L+ Y G +E A ++ MP + V ++N++I G
Sbjct: 255 GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVL-SACNHRGMVNEGLMYFDMMTKEYNV 365
HGK E A + F M++ P+S T+ +L AC +V ++ DM +++ V
Sbjct: 315 LCKHGKYERAKEVFAEMLR-SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD--V 371
Query: 366 EPRLEHYGCLVDLFARAGRIQEAL---NLVSEMPIKPDAVIWRSLLDACCKQ---DASVE 419
P L + ++ LF R+G + +AL N V E + PD VI+ L+ C++ ++
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 420 LGEEMAKQ 427
L EM +Q
Sbjct: 432 LRNEMLQQ 439
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 167/376 (44%), Gaps = 30/376 (7%)
Query: 74 LNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPF 133
L + +RL P+ F N I S + I K + ++ P +F
Sbjct: 6 LQFLSRLRKSSNLPDPFTCNKHIHQLINS----NCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS--- 190
V+ + + + + + G E D NSLI + G + A + +++
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 191 ----EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSL 246
+ VS+N + + + + D G MLK P+ T + I G L L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY----RDVNSWNS 302
+ + + MK+ ++ +V+ TCL+D YCK G LE+A +++ M +V ++ +
Sbjct: 182 ALKSF-HSMKR--DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
+I GF G+ + A + + RMV+ ++ PNS+ + ++ RG + + + + K
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVE-DRVEPNSLVYTTIIDGFFQRGDSDNAMKF---LAKM 294
Query: 363 YNVEPRLE--HYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQ--- 414
N RL+ YG ++ G+++EA +V +M + PD VI+ ++++A K
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 415 DASVELGEEMAKQVFE 430
A+V + ++ ++ FE
Sbjct: 355 KAAVNMYHKLIERGFE 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 168/406 (41%), Gaps = 55/406 (13%)
Query: 61 YSRILHYYSSLADLNYATRLFH---HFG-KPNSFMWNTLIRAYARSANHKHQAIELYKAM 116
++ ++ + L + +A + H FG +P+ +N+LI + R+ + + ++ L +++
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVL-ESL 117
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
PD +F + + L E +LK + ++ I +
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKS 176
Query: 177 GCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTM 231
G L +ALK F +M + V++ ++D Y +AG+ + A+ ++ EM ++ + T
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
++I G + A + + V + LV T ++D + + G + A + +
Sbjct: 237 TALIDGFCKKGEMQ---RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK 293
Query: 292 MPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
M + D+ ++ II G +GK + A + M K VP+ + F +++A G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK-SDLVPDMVIFTTMMNAYFKSG 352
Query: 348 MVNEGL-MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL----------------- 389
+ + MY ++ + + EP + ++D A+ G++ EA+
Sbjct: 353 RMKAAVNMYHKLIERGF--EPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLI 410
Query: 390 ----------------NLVSEMPIKPDAVIWRSLLDACCKQDASVE 419
+ +SE + PD ++ S + CKQ V+
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 143/313 (45%), Gaps = 17/313 (5%)
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
M++E + PD + ++ A ++ Q ++ KL + TR +IH YA G
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 179 LDMALKIFQNMSEKSEV----SWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQS 233
+ +L++F M V ++N +++ V + + A+++ EM L + +T
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
++ A +G A Y + ++ + D+ L+ CK G ++ A V + M
Sbjct: 665 IMQGYASVGDTGK---AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 294 YRDV--NS--WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMV 349
R++ NS +N +I G++ G A D +M K E P+ T+ +SAC+ G +
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK-EGVKPDIHTYTSFISACSKAGDM 780
Query: 350 NEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRS 406
N + M + V+P ++ Y L+ +ARA ++AL+ EM IKPD ++
Sbjct: 781 NRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 407 LLDACCKQDASVE 419
LL + + + E
Sbjct: 840 LLTSLLSRASIAE 852
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 139/328 (42%), Gaps = 53/328 (16%)
Query: 113 YKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHF 172
++A++ E+ P F ++K + ++ ++ G +RI SLIH
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353
Query: 173 YATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDG 228
YA +D AL + M E+ S V+++V+V + +AG + A F E ++H
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 229 YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV 288
++ I ++AH C+ ++E A+ +
Sbjct: 414 ASIYGKI------------IYAH-------------------------CQTCNMERAEAL 436
Query: 289 FERMPYRDVNS----WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN 344
M +++ +++++ G++M + L F R+ + F P +T+ +++
Sbjct: 437 VREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC-GFTPTVVTYGCLINLYT 495
Query: 345 HRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDA 401
G +++ L +M KE V+ L+ Y +++ F + A + +M +KPD
Sbjct: 496 KVGKISKALEVSRVM-KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 402 VIWRSLLDACC---KQDASVELGEEMAK 426
+++ +++ A C D +++ +EM K
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQK 582
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 155/354 (43%), Gaps = 24/354 (6%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELYK 114
++Y I+ + L A F + P++ ++ TLI + + + + + Y+
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 115 AMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA 174
M ++ PD T+ ++ + E ++ ++ G E D+ LI+ Y
Sbjct: 377 ----MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 175 TCGCLDMALKIFQNMSE----KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGY 229
G + A ++ +M + + V++ ++D + G+ D+A ++ EM K+ P+ +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 230 TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVF 289
T S+++ G + A V + + AD + T L+D YCK G ++ AQ++
Sbjct: 493 TYNSIVNGLCKSGNIE---EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 290 ERMPYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA-CN 344
+ M + + ++N ++ GF +HG E + + + PN+ TF ++ C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 345 HRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
+ +Y DM ++ V P + Y LV +A ++EA L EM K
Sbjct: 609 RNNLKAATAIYKDMCSR--GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 24/317 (7%)
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSE----VSWNVMVDSYVRAGEFDTALKVFGEM-L 221
N +IHF G + A + M K +S++ +V+ Y R GE D K+ M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 222 KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGS 281
K P+ Y S+I + L+ A + +++ + + D +V T L+D +CK G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR---QGILPDTVVYTTLIDGFCKRGD 366
Query: 282 LEIAQQVFERMPYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
+ A + F M RD+ ++ +II GF G A F M + P+S+TF
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFT 425
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM-- 395
+++ G + + + M + P + Y L+D + G + A L+ EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 396 -PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSG---AYVLLSKLYASAS 451
++P+ + S+++ CK EE K V E E + + Y L Y +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNI----EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 452 RWNEVGLLRKLMSDKGV 468
++ + K M KG+
Sbjct: 541 EMDKAQEILKEMLGKGL 557
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 155/354 (43%), Gaps = 24/354 (6%)
Query: 59 FLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELYK 114
++Y I+ + L A F + P++ ++ TLI + + + + + Y+
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 115 AMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYA 174
M ++ PD T+ ++ + E ++ ++ G E D+ LI+ Y
Sbjct: 377 ----MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 175 TCGCLDMALKIFQNMSE----KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGY 229
G + A ++ +M + + V++ ++D + G+ D+A ++ EM K+ P+ +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 230 TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVF 289
T S+++ G + A V + + AD + T L+D YCK G ++ AQ++
Sbjct: 493 TYNSIVNGLCKSGNIE---EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 290 ERMPYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA-CN 344
+ M + + ++N ++ GF +HG E + + + PN+ TF ++ C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 345 HRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK 398
+ +Y DM ++ V P + Y LV +A ++EA L EM K
Sbjct: 609 RNNLKAATAIYKDMCSR--GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 24/317 (7%)
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSE----VSWNVMVDSYVRAGEFDTALKVFGEM-L 221
N +IHF G + A + M K +S++ +V+ Y R GE D K+ M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 222 KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGS 281
K P+ Y S+I + L+ A + +++ + + D +V T L+D +CK G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR---QGILPDTVVYTTLIDGFCKRGD 366
Query: 282 LEIAQQVFERMPYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
+ A + F M RD+ ++ +II GF G A F M + P+S+TF
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFT 425
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM-- 395
+++ G + + + M + P + Y L+D + G + A L+ EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 396 -PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSG---AYVLLSKLYASAS 451
++P+ + S+++ CK EE K V E E + + Y L Y +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNI----EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 452 RWNEVGLLRKLMSDKGV 468
++ + K M KG+
Sbjct: 541 EMDKAQEILKEMLGKGL 557
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 167/375 (44%), Gaps = 48/375 (12%)
Query: 80 LFHHFG-KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKAC 138
+ FG KP++ +N ++ + K +E+ A M + + PD TF ++KA
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLK--LVEISHAKMSVWG--IKPDVSTFNVLIKA- 198
Query: 139 AHTFSLCEGKQVHAQLLKL------GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK 192
LC Q+ +L L G D + +++ Y G LD AL+I + M E
Sbjct: 199 -----LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 193 ----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAGLGALSL 246
S VS NV+V + + G + AL EM PD YT ++++ G +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 247 GMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNS 302
+ +++ + DV ++ CK G ++ A +V ++M RD + ++N+
Sbjct: 314 AIEIMDVMLQ---EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 303 IILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC----NHRGMVNEGLMYFDM 358
+I + E A + R++ + +P+ TF ++ NHR + ++ +M
Sbjct: 371 LISTLCKENQVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME---LFEEM 426
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDA---VIWRSLLDACCKQD 415
+K EP Y L+D G++ EALN++ +M + A + + +L+D CK +
Sbjct: 427 RSK--GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 416 ASVELGEEMAKQVFE 430
+ E A+++F+
Sbjct: 485 KTRE-----AEEIFD 494
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 177/421 (42%), Gaps = 38/421 (9%)
Query: 126 PDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKI 185
PD YTF ++ + ++ +L+ GY+ D NS+I G + A+++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 186 FQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAG 240
M + + V++N ++ + + + + A ++ + K PD T S+I G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ---G 409
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY----RD 296
L A + K D L+D C G L+ A + ++M R
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V ++N++I GF K A + F M ++ NS+T+ ++ V +
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCK 413
D M E +P Y L+ F R G I++A ++V M +PD V + +L+ CK
Sbjct: 529 DQMIME-GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 414 QDASVELGEEMAKQVFEIEG-SVCSGAY-VLLSKLYASASRWNEVGLLRKLMSDKGVTKK 471
VE+ ++ + + +++G ++ AY ++ L+ + L R+++
Sbjct: 588 A-GRVEVASKLLRSI-QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP- 644
Query: 472 PGCSLIEIDGVAHEF-FAG--DTTHPKSEDIYKFLNEIDEKLESMGYLPDYSGAHLVDET 528
D V++ F G + P E + FL E+ EK G++P++S +++ E
Sbjct: 645 --------DAVSYRIVFRGLCNGGGPIREAV-DFLVELLEK----GFVPEFSSLYMLAEG 691
Query: 529 I 529
+
Sbjct: 692 L 692
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 180/414 (43%), Gaps = 33/414 (7%)
Query: 90 FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQ 149
+++ LI A RS +LY+A +L ++ + P T+ ++ ACA + +
Sbjct: 168 LLYSILIHALGRSE-------KLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALN 218
Query: 150 VHAQLLKLGYESDTRICNSLIHFYATCGCLD--MALKIFQNMS-EKSEVSWNVMVD---S 203
+ A++ + GY+SD + +I +D M L++++ + +K E+ ++ D
Sbjct: 219 LIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMG 278
Query: 204 YVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNV 262
+ ++G+ AL++ G T+ S+ISA A G + A A + +
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR---TLEAEALFEELRQSGI 335
Query: 263 AADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALD 318
L+ Y K G L+ A+ + M R D ++++ +I + G+ E+A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA-R 394
Query: 319 YFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDL 378
+ ++ PNS F +L+ RG + M K V+P + Y ++D
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDT 453
Query: 379 FARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSV 435
F + + A+ M I+PD V W +L+D CK + + EEM + E G +
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI-VAEEMF-EAMERRGCL 511
Query: 436 -CSGAYVLLSKLYASASRWNEVGLLRKLMSDKGVTKK--PGCSLIEIDGVAHEF 486
C+ Y ++ Y RW+++ L M +G+ +L+++ G + F
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 138/302 (45%), Gaps = 21/302 (6%)
Query: 130 TFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM 189
T ++ A A + E + + +L + G + TR N+L+ Y G L A + M
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 190 SEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGAL 244
++ E ++++++D+YV AG +++A V EM P+ + +++ G
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA-----GFR 420
Query: 245 SLGMWAHAYVMKKCDKN--VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN---- 298
G W + + K K+ V D ++D + K L+ A F+RM +
Sbjct: 421 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 299 SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDM 358
+WN++I HG+ A + F M + +P + T+ ++++ + ++
Sbjct: 481 TWNTLIDCHCKHGRHIVAEEMFEAMER-RGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 359 MTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQD 415
M K + P + + LVD++ ++GR +A+ + EM +KP + ++ +L++A ++
Sbjct: 540 M-KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 416 AS 417
S
Sbjct: 599 LS 600
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 141/319 (44%), Gaps = 19/319 (5%)
Query: 127 DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF 186
D Y++ V+ V +++K GYE D +SLI+ + + A+ +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 187 QNMSE----KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLG 242
M E V +N ++D + G + A+++F M + DG +V G
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM----ERDGVRADAVTYNSLVAG 218
Query: 243 ALSLGMWAHAYVMKK--CDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----D 296
G W+ A + + +++ +V+ T ++D++ K G A +++E M R D
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 297 VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF 356
V ++NS+I G MHG+ + A MV + +P+ +T+ +++ V+EG F
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVT-KGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 357 DMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACC---K 413
M + V + Y ++ + +AGR A + S M +P+ + LL C +
Sbjct: 338 REMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWR 396
Query: 414 QDASVELGEEMAKQVFEIE 432
+ ++ L E M K E++
Sbjct: 397 VEKALVLFENMQKSEIELD 415
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 166/405 (40%), Gaps = 63/405 (15%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYARSANHKHQAIELYKAM 116
+S++L + + + LFHH + + +N +I R + A+ + M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI-ALSVVGKM 130
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
M E PD T ++ + + + +++ ++G+ D I N++I
Sbjct: 131 MKFGYE---PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 177 GCLDMALKIFQNMSEK---------------------------------------SEVSW 197
G ++ A+++F M + +++
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 198 NVMVDSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMK 256
++D +V+ G+F A+K++ EM + DPD +T S+I+ G + A +
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD---EAKQMLDL 304
Query: 257 KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGK 312
K DV+ L++ +CK ++ ++F M R D ++N+II G+ G+
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 313 AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY 372
+AA + F RM PN T+ +L V + L+ F+ M K +E + Y
Sbjct: 365 PDAAQEIFSRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS-EIELDITTY 419
Query: 373 GCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQ 414
++ + G +++A +L + +KPD V + +++ C++
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 164/384 (42%), Gaps = 22/384 (5%)
Query: 43 AQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG-KPNSFMWNTLIRAYAR 101
A+ L ++ + + Y+ ++ Y ++N A + P+ +NT++R+
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD 216
Query: 102 SANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYES 161
S K QA+E+ M+ + + PD T+ +++A + ++ ++ G
Sbjct: 217 SGKLK-QAMEVLDRML---QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 162 DTRICNSLIHFYATCGCLDMALKIFQNMS----EKSEVSWNVMVDSYVRAGEFDTALKVF 217
D N L++ G LD A+K +M + + ++ N+++ S G + A K+
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 218 GEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+ML K P T +I+ G L A + K + L L+ +
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLG---RAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 277 CKCGSLEIAQQVFERMP----YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
CK ++ A + ERM Y D+ ++N+++ GK E A++ + + P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE-ILNQLSSKGCSPV 448
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
IT+ V+ G + + D M + +++P Y LV +R G++ EA+
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 393 SE---MPIKPDAVIWRSLLDACCK 413
E M I+P+AV + S++ CK
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCK 531
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 167/394 (42%), Gaps = 43/394 (10%)
Query: 135 LKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE 194
L+ T L EG + ++ G D C +LI + G A KI + +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 195 V----SWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWA 250
V ++NVM+ Y +AGE + AL V M PD T +++ + G L M
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV--SPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 251 HAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILG 306
+++ ++ DV+ T L++ C+ + A ++ + M R DV ++N ++ G
Sbjct: 227 LDRMLQ---RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVL-SACNHRGMVNEGLMYFDMMTKEYNV 365
G+ + A+ + M PN IT +L S C+ ++ + DM+ K ++
Sbjct: 284 ICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS- 341
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGE 422
P + + L++ R G + A++++ +MP +P+++ + LL CK+ +
Sbjct: 342 -PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE-------K 393
Query: 423 EMAKQVFEIEGSVCSGAY-------VLLSKLYASASRWNEVGLLRKLMSDKGVTKKPGCS 475
+M + + +E V G Y +L+ L + V +L +L S GCS
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-------GCS 446
Query: 476 LIEIDGVAHEFFAGDTTHPKSEDIYKFLNEIDEK 509
+ I + G K+ K L+E+ K
Sbjct: 447 PVLI--TYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 157/367 (42%), Gaps = 30/367 (8%)
Query: 46 LRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRA--- 98
L+ ++ + +Y+ I+ + ++N A LF +PN +N+LIR
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 99 YARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLG 158
Y R ++ + + M+E ++ P+ TF ++ A L E ++++ +++K
Sbjct: 304 YGRWSDAS-------RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTAL 214
+ D +SLI+ + LD A +F+ M K + V++N ++ + +A D +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 215 KVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKK--CDKNVAADVLVNTCL 272
++F EM + G +V G +A ++ K V D++ + L
Sbjct: 417 ELFREMSQ----RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 273 VDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+D C G +E A VFE + D+ ++N +I G GK E D F + ++
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKG 531
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
PN +T+ ++S +G+ E F M KE P Y L+ R G +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 389 LNLVSEM 395
L+ EM
Sbjct: 591 AELIREM 597
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 167/376 (44%), Gaps = 56/376 (14%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMML--------------------------- 118
+P+SF +NTLI R N +A+ L M++
Sbjct: 183 QPDSFTFNTLIHGLFRH-NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 119 -----MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
M + ++ P + ++ A + ++ + + ++ G + NSLI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 174 ATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDG 228
G A ++ +M E+ + V+++ ++D++V+ G+ A K++ EM+K DPD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 229 YTMQSVISACAGLGALSLGMWAHAY---VMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
+T S+I+ L H + + K C NV V NT L+ +CK ++
Sbjct: 362 FTYSSLINGFCMHDRLDEA--KHMFELMISKDCFPNV---VTYNT-LIKGFCKAKRVDEG 415
Query: 286 QQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
++F M R + ++ ++I GF + + A F +MV + +P+ +T+ +L
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTYSILLD 474
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL---VSEMPIK 398
+ G V L+ F+ + + +EP + Y +++ +AG++++ +L +S +K
Sbjct: 475 GLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 399 PDAVIWRSLLDACCKQ 414
P+ V + +++ C++
Sbjct: 534 PNVVTYTTMMSGFCRK 549
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 160/392 (40%), Gaps = 65/392 (16%)
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEG 147
N + ++ LI + R + L K M L E PD T +L H + +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYE----PDIVTLNSLLNGFCHGNRISDA 170
Query: 148 KQVHAQLLKLGYESDTRICNSLIH---------------------------------FYA 174
+ Q++++GY+ D+ N+LIH
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 175 TC--GCLDMALKIFQNMS----EKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPD 227
C G +D+AL + + M E V +N ++D+ + AL +F EM K P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 228 GYTMQSVISACAGLGALSLGMWAHA--YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
T S+I + G W+ A + ++ + +V+ + L+D + K G L A
Sbjct: 291 VVTYNSLIRCLC-----NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 286 QQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
+++++ M R D+ +++S+I GF MH + + A F M+ + F PN +T+ ++
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIK 404
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIK 398
V+EG+ F M++ V + Y L+ F +A A + +M +
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 399 PDAVIWRSLLDACCKQDASVELGEEMAKQVFE 430
PD + + LLD C E A VFE
Sbjct: 464 PDIMTYSILLDGLCNNGKV-----ETALVVFE 490
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 179 LDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQS 233
LD A+ +F +M + S V ++ ++ + + +FD + + +M L + YT
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCK----CGSLEIAQQVF 289
+I+ LSL + A +MK D++ L++ +C ++ + Q+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKL---GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 290 ERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMV 349
E D ++N++I G H +A A+ RMV ++ P+ +T+ V++ RG +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 350 NEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRS 406
+ L M ++ +EP + Y ++D + +ALNL +EM I+P+ V + S
Sbjct: 238 DLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 407 LLDACCK----QDASVELGEEMAKQVFE--IEGSVCSGAYVLLSKLYASASRWNEV 456
L+ C DAS L + + +++ + S A+V KL + ++E+
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 161/373 (43%), Gaps = 67/373 (17%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
P+ ++N+L+ AY S +H + YK + M++ +P + + ++ S+C
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYA----YKLLKKMVKCGHMPGYVVYNILIG------SICG 419
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVR 206
K +SL C LD+A K + M V + V S+ R
Sbjct: 420 DK------------------DSL-----NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 207 ----AGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
AG+++ A V EM+ + PD T V++ + L MK+
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE-MKR--GG 513
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMP----YRDVNSWNSIILGFSMHGKAEAAL 317
+ ADV T +VD +CK G +E A++ F M +V ++ ++I + K A
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 318 DYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYF------------DMMTKEYN- 364
+ F M+ E +PN +T+ ++ G V + F DM K+Y+
Sbjct: 574 ELFETMLS-EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 365 --VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPI---KPDAVIWRSLLDACCKQ---DA 416
P + YG L+D F ++ R++EA L+ M + +P+ +++ +L+D CK D
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 417 SVELGEEMAKQVF 429
+ E+ EM++ F
Sbjct: 693 AQEVKTEMSEHGF 705
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 157/364 (43%), Gaps = 41/364 (11%)
Query: 98 AYARSANHKHQAIELYKAMMLMMEEE---VVPDHYTFPFVLKACAHTFSLCEGKQVHAQL 154
Y++ N+ A ++ A +L E + +V D YT+ ++ + + + ++ ++
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 155 LKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEF 210
++G + +LIH Y + A ++F+ M + + V+++ ++D + +AG+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 211 DTALKVFGEMLKLHD-PD------GYTMQSVISACAGLGALSLGM-----------WAHA 252
+ A ++F M D PD Y S GAL G A
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 253 YVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFS 308
M+ C+ N +V L+D CK G L+ AQ+V M + +++S+I +
Sbjct: 665 MSMEGCEPNQ----IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 309 MHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPR 368
+ + A +M++ PN + + ++ G +E MM +E +P
Sbjct: 721 KVKRQDLASKVLSKMLE-NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM-EEKGCQPN 778
Query: 369 LEHYGCLVDLFARAGRIQEALNLVSEMPIK---PDAVIWRSLLDACCKQ---DASVELGE 422
+ Y ++D F G+I+ L L+ M K P+ V +R L+D CCK D + L E
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 423 EMAK 426
EM +
Sbjct: 839 EMKQ 842
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 171/421 (40%), Gaps = 82/421 (19%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELYKAM 116
Y+ ++H Y ++YA LF PN ++ LI + + A +A ++++
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK-AGQVEKACQIFER- 613
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
M + VPD + F + ++ G +L+ +
Sbjct: 614 --MCGSKDVPDVDMY----------FKQYDDNSERPNVVTYG---------ALLDGFCKS 652
Query: 177 GCLDMALKIFQNMS----EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDG-YTM 231
++ A K+ MS E +++ ++ ++D + G+ D A +V EM + P YT
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
S+I + L A + K + + A +V++ T ++D CK G + A ++ +
Sbjct: 713 SSLIDRYFKVKRQDL---ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769
Query: 292 MPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG 347
M + +V ++ ++I GF M GK E L+ RM + PN +T+ ++ C G
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCKNG 828
Query: 348 MVN---------------------------------EGLMYFDMMTKEYNVEPRLEHYGC 374
++ E L D + ++ + P L Y
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD-DTAPFLSVYRL 887
Query: 375 LVDLFARAGRIQEALNLVSEMPIKPDAVI-----WRSLLDACC---KQDASVELGEEMAK 426
L+D +A R++ AL L+ E+ ++ + SL+++ C K + + +L EM K
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947
Query: 427 Q 427
+
Sbjct: 948 K 948
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 152/378 (40%), Gaps = 35/378 (9%)
Query: 41 IHAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLI 96
+ A+ L I + + Y+ ILH YS A LF + P +N ++
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252
Query: 97 RAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK 156
+ + + + + M + + D +T VL ACA L E K+ A+L
Sbjct: 253 DVFGKMGRSWRKILGVLDEMR---SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKS 309
Query: 157 LGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDT 212
GYE T N+L+ + G AL + + M E S V++N +V +YVRAG
Sbjct: 310 CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 213 ALKVFGEMLKLHD-PDGYTMQSVISACAGLG----ALSL--GMWAHAYVMKKCDKNVAAD 265
A V M K P+ T +VI A G AL L M V C N
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 266 VLVNTC----LVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFF 321
+L ++ M C S + P R +WN+ +L + + ++ F
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCS-------PNR--ATWNT-MLALCGNKGMDKFVNRVF 479
Query: 322 RMVKIEKFVPNSITFVGVLSACNHRGM-VNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
R +K F P+ TF ++SA G V+ MY +M +N + Y L++ A
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA--CVTTYNALLNALA 537
Query: 381 RAGRIQEALNLVSEMPIK 398
R G + N++S+M K
Sbjct: 538 RKGDWRSGENVISDMKSK 555
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 24/269 (8%)
Query: 159 YESDTRICNSLIHFYATCGCLDMALKIFQNMSE----KSEVSWNVMVDSYVRAGE-FDTA 213
Y D R +++H Y+ G + A+ +F+ M E + V++NV++D + + G +
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI 265
Query: 214 LKVFGEM----LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVN 269
L V EM LK D +T +V+SACA G L A +K C +
Sbjct: 266 LGVLDEMRSKGLKF---DEFTCSTVLSACAREGLLREAKEFFAE-LKSC--GYEPGTVTY 319
Query: 270 TCLVDMYCKCG----SLEIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVK 325
L+ ++ K G +L + +++ E D ++N ++ + G ++ A M K
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 326 IEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRI 385
+ +PN+IT+ V+ A G +E L F M KE P Y ++ L + R
Sbjct: 380 -KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 386 QEALNLVSEMP---IKPDAVIWRSLLDAC 411
E + ++ +M P+ W ++L C
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 149/354 (42%), Gaps = 23/354 (6%)
Query: 55 PQALFLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAI 110
P A+ Y+ ++ Y + A +LF+ + PN+ +N ++ + K ++
Sbjct: 384 PNAI-TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK----KSRSN 438
Query: 111 ELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLI 170
E+ K + M P+ T+ +L C + +V ++ G+E D N+LI
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 171 HFYATCGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDP 226
Y CG A K++ M+ ++N ++++ R G++ + V +M
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC-GSLEIA 285
T S++ C G LG+ +K+ + +L L + C+ E A
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 286 QQVFERMPYRD----VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
+F++ Y+ NS SI +M+ +AE L+ ++ + P+ +T+ ++
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES----IREDGLSPDLVTYNSLMD 674
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
RG + + K ++P L Y ++ F R G +QEA+ ++SEM
Sbjct: 675 MYVRRGECWKAEEILKTLEKS-QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 50/313 (15%)
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAG 208
Q L G+ DTR N+L+H G LD A +I + + + VS+N ++
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 209 EFDTALKVFGEMLKLH-DPDGYTMQSVISA----------------CAGLGALSLGMWAH 251
+ D A EM+K PD YT +I C G L ++ +
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP-DVYTY 613
Query: 252 AYVMKKC-----------------DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
+ ++ C KNV + +V L+ YC+ G L +A ++ E M +
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 295 RDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG-MV 349
+ ++ ++ S+I G S+ + E A F +++E PN + ++ G MV
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEA-KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 350 NEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRS 406
+ +M +K NV P Y ++ +AR G + EA L++EM I PD++ ++
Sbjct: 733 KVECLLREMHSK--NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 407 LLDACCKQDASVE 419
+ KQ +E
Sbjct: 791 FIYGYLKQGGVLE 803
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 63/336 (18%)
Query: 155 LKLGYESDTR--ICNSLIHFYATC----GCLDMALKIFQNMSEK----SEVSWNVMVDSY 204
L L ++ + R + + LI Y T GC +AL +F ++ K S+ + N+++ S
Sbjct: 178 LSLCFDEEIRRKMSDLLIEVYCTQFKRDGCY-LALDVFPVLANKGMFPSKTTCNILLTSL 236
Query: 205 VRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
VRA EF + F + K PD Y + I+A
Sbjct: 237 VRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA--------------------------- 269
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYF 320
+CK G +E A ++F +M +V ++N++I G M G+ + A +
Sbjct: 270 -----------FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 321 FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
+MV+ P IT+ ++ + + MTK+ P + Y L+D F
Sbjct: 319 EKMVE-RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFI 376
Query: 381 RAGRIQEALNLVSEMPIKP---DAVIWRSLLDACCKQ---DASVELGEEMAKQVFEI-EG 433
AG + +A+ + M K + + +L+ CK D + L +EM F + +G
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 434 SVCSGAYVLLSKL-YASASRWNEVGLLRKLMSDKGV 468
S S +L S L + SA R+ LLR + G+
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 148/357 (41%), Gaps = 27/357 (7%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
P+ N L+ + R AN + E + + + V PD Y F + A + E
Sbjct: 224 PSKTTCNILLTSLVR-ANEFQKCCEAFDVVC----KGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMVD 202
++ +++ + G + N++I CG D A + M E+ + ++++++V
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 203 SYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
RA A V EM K P+ ++I + G+L+ + ++ K
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV---SKG 395
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMHGKAEAAL 317
++ L+ YCK G + A+++ + M N S+ S+I H ++AL
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 318 DYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL-MYFDMMTKEYNVEPRLEHYGCLV 376
+ M+ + P ++S G ++ L ++F + K + V+ R + L+
Sbjct: 456 RFVGEML-LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN--ALL 512
Query: 377 DLFARAGRIQEALNLVSEMPIKP---DAVIWRSLLDACC---KQDASVELGEEMAKQ 427
AG++ EA + E+ + D V + +L+ CC K D + +EM K+
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KP+++ ++ LI + N +AI+ + ++PD YT+ ++ C
Sbjct: 572 KPDNYTYSILICGLF-NMNKVEEAIQFWDDCK---RNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMV 201
EG++ +++ + +T + N LI Y G L MAL++ ++M K + ++ ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 202 DSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK 260
+ A +F EM ++ +P+ + ++I G G L + + + K
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID---GYGKLGQMVKVECLLREMHSK 744
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHG 311
NV + + T ++ Y + G++ A ++ M + D ++ I G+ G
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 50/313 (15%)
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAG 208
Q L G+ DTR N+L+H G LD A +I + + + VS+N ++
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 209 EFDTALKVFGEMLKLH-DPDGYTMQSVISA----------------CAGLGALSLGMWAH 251
+ D A EM+K PD YT +I C G L ++ +
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP-DVYTY 613
Query: 252 AYVMKKC-----------------DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY 294
+ ++ C KNV + +V L+ YC+ G L +A ++ E M +
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 295 RDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRG-MV 349
+ ++ ++ S+I G S+ + E A F +++E PN + ++ G MV
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEA-KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 350 NEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRS 406
+ +M +K NV P Y ++ +AR G + EA L++EM I PD++ ++
Sbjct: 733 KVECLLREMHSK--NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 407 LLDACCKQDASVE 419
+ KQ +E
Sbjct: 791 FIYGYLKQGGVLE 803
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 63/336 (18%)
Query: 155 LKLGYESDTR--ICNSLIHFYATC----GCLDMALKIFQNMSEK----SEVSWNVMVDSY 204
L L ++ + R + + LI Y T GC +AL +F ++ K S+ + N+++ S
Sbjct: 178 LSLCFDEEIRRKMSDLLIEVYCTQFKRDGCY-LALDVFPVLANKGMFPSKTTCNILLTSL 236
Query: 205 VRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA 264
VRA EF + F + K PD Y + I+A
Sbjct: 237 VRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA--------------------------- 269
Query: 265 DVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYF 320
+CK G +E A ++F +M +V ++N++I G M G+ + A +
Sbjct: 270 -----------FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 321 FRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFA 380
+MV+ P IT+ ++ + + MTK+ P + Y L+D F
Sbjct: 319 EKMVE-RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFI 376
Query: 381 RAGRIQEALNLVSEMPIKP---DAVIWRSLLDACCKQ---DASVELGEEMAKQVFEI-EG 433
AG + +A+ + M K + + +L+ CK D + L +EM F + +G
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 434 SVCSGAYVLLSKL-YASASRWNEVGLLRKLMSDKGV 468
S S +L S L + SA R+ LLR + G+
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 148/357 (41%), Gaps = 27/357 (7%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
P+ N L+ + R AN + E + + + V PD Y F + A + E
Sbjct: 224 PSKTTCNILLTSLVR-ANEFQKCCEAFDVVC----KGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMVD 202
++ +++ + G + N++I CG D A + M E+ + ++++++V
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 203 SYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKN 261
RA A V EM K P+ ++I + G+L+ + ++ K
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV---SKG 395
Query: 262 VAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMHGKAEAAL 317
++ L+ YCK G + A+++ + M N S+ S+I H ++AL
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 318 DYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL-MYFDMMTKEYNVEPRLEHYGCLV 376
+ M+ + P ++S G ++ L ++F + K + V+ R + L+
Sbjct: 456 RFVGEML-LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN--ALL 512
Query: 377 DLFARAGRIQEALNLVSEMPIKP---DAVIWRSLLDACC---KQDASVELGEEMAKQ 427
AG++ EA + E+ + D V + +L+ CC K D + +EM K+
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KP+++ ++ LI + N +AI+ + ++PD YT+ ++ C
Sbjct: 572 KPDNYTYSILICGLF-NMNKVEEAIQFWDDCK---RNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMV 201
EG++ +++ + +T + N LI Y G L MAL++ ++M K + ++ ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 202 DSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK 260
+ A +F EM ++ +P+ + ++I G G L + + + K
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID---GYGKLGQMVKVECLLREMHSK 744
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHG 311
NV + + T ++ Y + G++ A ++ M + D ++ I G+ G
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 174/398 (43%), Gaps = 32/398 (8%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGKP----NSFMWNTLIRAYARSANHKHQAIELYKAM 116
Y+ +++ Y+ + D+ TR+ + N + +LI+ Y + K E
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCK----KGLMEEAEHVF 319
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
L+ E+++V D + + ++ T + + +VH ++++G ++T ICNSLI+ Y
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 177 GCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTM 231
G L A +IF M++ S ++N +VD Y RAG D ALK+ +M + P T
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 232 QSVISACAGLGAL--SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVF 289
++ + +GA L +W +M K + V AD + + L++ K G A +++
Sbjct: 440 NILLKGYSRIGAFHDVLSLWK---MMLK--RGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 290 ERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH 345
E + R D + N +I G K A + V I + P T+ +
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKE-ILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAV 402
G + E + M ++ + P +E Y L+ + + + +LV E+ + P
Sbjct: 554 VGNLKEAFAVKEYMERK-GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Query: 403 IWRSLLDACCK---QDASVELGEEMAKQVFEIEGSVCS 437
+ +L+ C D + EM ++ + ++CS
Sbjct: 613 TYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICS 650
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 160/366 (43%), Gaps = 25/366 (6%)
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLK--LGYESDTRICNSLIHFYATC 176
M+ EV PD +T V+ A + ++ + V A+ + LG E + NSLI+ YA
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNV-DKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 177 GCLDMALKIFQNMSE----KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYT 230
G ++ ++ + MSE ++ V++ ++ Y + G + A VF E+LK D +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKEKKLVADQHM 333
Query: 231 MQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFE 290
++ G + + H ++ + V + + L++ YCK G L A+Q+F
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMI---EIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 390
Query: 291 RMP----YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHR 346
RM D +++N+++ G+ G + AL +M + E VP +T+ +L +
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE-VVPTVMTYNILLKGYSRI 449
Query: 347 GMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL---VSEMPIKPDAVI 403
G ++ L + MM K V L++ + G EA+ L V + D +
Sbjct: 450 GAFHDVLSLWKMMLKR-GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 404 WRSLLDACCKQDASVELGEEMAK-QVFEIEGSVCSGAYVLLSKLYASASRWNEVGLLRKL 462
++ CK + E E + +F + +V + Y LS Y E +++
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT--YQALSHGYYKVGNLKEAFAVKEY 566
Query: 463 MSDKGV 468
M KG+
Sbjct: 567 MERKGI 572
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
+N I G GK E A F ++ ++F+P+ T+ ++ C G +N+ D M
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 360 TKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDA 416
+ + P + Y L+ + G + A L+ ++P I P+A+ + +L+D K
Sbjct: 782 ALK-GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK--- 837
Query: 417 SVELGEEMAKQVFEIEGSVCSGA 439
S + E M + IE + G+
Sbjct: 838 SGNVAEAMRLKEKMIEKGLVRGS 860
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 154/373 (41%), Gaps = 53/373 (14%)
Query: 53 NHP-QALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYARSANHKH 107
+HP ++ +SR+L + L LF H + + + TLI + R A
Sbjct: 73 SHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSL 132
Query: 108 QAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICN 167
L K M L E +V TF ++ H E + Q++ LGYE + I N
Sbjct: 133 ALSCLGKMMKLGFEPSIV----TFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 168 SLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DP 226
++I DS G+ +TAL V M K+ P
Sbjct: 189 TII-------------------------------DSLCEKGQVNTALDVLKHMKKMGIRP 217
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQ 286
D T S+I+ G + + +M+ ++ DV+ + L+D+Y K G L A+
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMR---MGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 287 QVFERMPYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
+ + M R VN ++NS+I G +HG + A +V + F PN++T+ +++
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS-KGFFPNAVTYNTLING 333
Query: 343 CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKP 399
V++G+ +M+++ V+ Y L + +AG+ A ++ M + P
Sbjct: 334 YCKAKRVDDGMKILCVMSRD-GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Query: 400 DAVIWRSLLDACC 412
D + LLD C
Sbjct: 393 DMYTFNILLDGLC 405
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 127/323 (39%), Gaps = 21/323 (6%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELY 113
+ +Y+ I+ +N A + H K P+ +N+LI S A
Sbjct: 184 VVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA---- 239
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
+ + MM + PD TF ++ L E K+ + ++++ + NSLI+
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 174 ATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDG 228
G LD A K+ + K + V++N +++ Y +A D +K+ M + D D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 229 YTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQV 288
+T ++ G S A + + V D+ L+D C G + A
Sbjct: 360 FTYNTLYQGYCQAGKFS---AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 289 FERMPYRD----VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACN 344
E + + ++N II G K E A Y F + ++ P+ IT++ ++
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW-YLFCSLALKGVSPDVITYITMMIGLR 475
Query: 345 HRGMVNEGLMYFDMMTKEYNVEP 367
+ + E + M KE + P
Sbjct: 476 RKRLWREAHELYRKMQKEDGLMP 498
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISACAGLGALSLGMWAHAYV 254
S+ ++D + R AL G+M+KL +P T S+++ G ++ A + V
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN---GFCHVNRFYEAMSLV 172
Query: 255 MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMH 310
+ +V++ ++D C+ G + A V + M DV ++NS+I
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLE 370
G + M+++ P+ ITF ++ G + E ++ M + +V P +
Sbjct: 233 GTWGVSARILSDMMRM-GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR-SVNPNIV 290
Query: 371 HYGCLVDLFARAGRIQEA---LNLVSEMPIKPDAVIWRSLLDACCK 413
Y L++ G + EA LN++ P+AV + +L++ CK
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 110/249 (44%), Gaps = 17/249 (6%)
Query: 181 MALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACA 239
++L+I + + + + S + + +F+ AL +F +M + H P ++ A A
Sbjct: 31 LSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIA 90
Query: 240 GLGALS--LGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY--- 294
L + ++ H ++ ++ D+ T L+D +C+C L +A +M
Sbjct: 91 KLNKYEAVISLFRHLEML-----GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF 145
Query: 295 -RDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGL 353
+ ++ S++ GF + A+ ++V + + PN + + ++ + +G VN L
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL-GYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 354 MYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDA 410
M K+ + P + Y L+ +G + ++S+M I PD + + +L+D
Sbjct: 205 DVLKHM-KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 411 CCKQDASVE 419
K+ +E
Sbjct: 264 YGKEGQLLE 272
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 20/315 (6%)
Query: 125 VPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALK 184
VP F + L E Q +++ + TR CN L+H +A G D +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 185 IFQNM----SEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACA 239
F++M + + ++N+M+D + G+ + A +F EM + PD T S+I
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 240 GLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR---- 295
+G L + + C DV+ L++ +CK G L I + + M
Sbjct: 309 KVGRLDDTVCFFEEMKDMC---CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
+V S+++++ F G + A+ ++ M ++ VPN T+ ++ A G +++
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACC 412
+ M + VE + Y L+D A R++EA L +M + P+ + +L+
Sbjct: 425 GNEML-QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 413 K---QDASVELGEEM 424
K D ++EL E+
Sbjct: 484 KAKNMDRALELLNEL 498
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 31/370 (8%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KPN ++TL+ A+ + QAI+ Y M + +VP+ YT+ ++ A +L
Sbjct: 364 KPNVVSYSTLVDAFCKEG-MMQQAIKFYVDMRRV---GLVPNEYTYTSLIDANCKIGNLS 419
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEV----SWNVMV 201
+ ++ ++L++G E + +LI + A ++F M + S+N ++
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 202 DSYVRAGEFDTALKVFGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYV----MK 256
+V+A D AL++ E+ + PD + I G SL A V MK
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI-----WGLCSLEKIEAAKVVMNEMK 534
Query: 257 KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMHGK 312
+C + A+ L+ T L+D Y K G+ + + M D+ ++ +I G +
Sbjct: 535 EC--GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 313 AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY 372
A+DYF R+ N+ F ++ V F+ M ++ + P Y
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK-GLVPDRTAY 651
Query: 373 GCLVDLFARAGRIQEALNL---VSEMPIKPDAVIWRSL---LDACCKQDASVELGEEMAK 426
L+D + G + EAL L ++E+ +K D + + SL L C + + EEM
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711
Query: 427 QVFEIEGSVC 436
+ + +C
Sbjct: 712 EGIHPDEVLC 721
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 155/335 (46%), Gaps = 24/335 (7%)
Query: 92 WNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVH 151
+NTL+ + AR E+ + M M+E++V P+ YT+ ++ ++ E Q
Sbjct: 186 YNTLLNSLARFG----LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 152 AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS----EKSEVSWNVMVDSYVRA 207
+++++ G + D SLI Y LD A K+F M ++EV++ ++ A
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 208 GEFDTALKVFGEMLKLHDPDGY-TMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADV 266
D A+ +F +K+ D + + T+++ L A V + + + ++
Sbjct: 302 RRIDEAMDLF---VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 267 LVNTCLVDMYCKCGSLEIAQ----QVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFR 322
T L+D C E A+ Q+ E+ +V ++N++I G+ G E A+D
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD-VVE 417
Query: 323 MVKIEKFVPNSITFVGVLSA-CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFAR 381
+++ K PN+ T+ ++ C + V++ + + M E V P + Y L+D R
Sbjct: 418 LMESRKLSPNTRTYNELIKGYC--KSNVHKAMGVLNKML-ERKVLPDVVTYNSLIDGQCR 474
Query: 382 AGRIQEA---LNLVSEMPIKPDAVIWRSLLDACCK 413
+G A L+L+++ + PD + S++D+ CK
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 146/345 (42%), Gaps = 42/345 (12%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KPN + LI + + +A EL M+ E+ ++P+ T+ ++ +
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFE-KARELLGQML---EKGLMPNVITYNALINGYCKRGMIE 410
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE----VSWNVMV 201
+ V + +TR N LI Y + A+ + M E+ V++N ++
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 202 DSYVRAGEFDTALKVFGEMLKLHD----PDGYTMQSVISACAGLGALSLGMWAHAYVMKK 257
D R+G FD+A ++ M +D PD +T S+I + + V +
Sbjct: 470 DGQCRSGNFDSAYRLLSLM---NDRGLVPDQWTYTSMIDS----------LCKSKRVEEA 516
Query: 258 CD-------KNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDV--NS--WNSIILG 306
CD K V +V++ T L+D YCK G ++ A + E+M ++ NS +N++I G
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVE 366
GK + A +MVKI P T ++ G + F M +
Sbjct: 577 LCADGKLKEATLLEEKMVKI-GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTK 634
Query: 367 PRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLL 408
P Y + + R GR+ +A +++++M + PD + SL+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 147/360 (40%), Gaps = 44/360 (12%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
P+ +N+LI RS N Y+ + LM + +VPD +T+ ++ + + + E
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSA----YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKS----EVSWNVMVD 202
+ L + G + + +LI Y G +D A + + M K+ +++N ++
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 203 SYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGL--GALSLGMWAHAY--VMKKC 258
G+ A + +M+K+ +Q +S L L G + HAY +
Sbjct: 576 GLCADGKLKEATLLEEKMVKI------GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 259 DKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAE 314
D T + YC+ G L A+ + +M D+ +++S+I G+ G+
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 315 AALDYFFRMVKIEKFVPNSITFVGVLSAC------NHRGMVNE-----GLMYFDMMTK-- 361
A D RM + P+ TF+ ++ +G E +M FD + +
Sbjct: 690 FAFDVLKRM-RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 362 ----EYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP----IKPDAVIWRSLLDACCK 413
E++V P + Y L+ G ++ A + M I P +++ +LL CCK
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 197 WNVMVDSYVRAGEFDTALKVFGEMLKLHD-PDGYTMQSVISACAGLGALSLGMWAHAYVM 255
+N +++S R G D +V+ EML+ P+ YT +++ LG + A+ YV
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVE---EANQYVS 242
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPY----RDVNSWNSIILGFSMHG 311
K + + D T L+ YC+ L+ A +VF MP R+ ++ +I G +
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH 371
+ + A+D F +M E F P +
Sbjct: 303 RIDEAMDLFVKMKDDECF-------------------------------------PTVRT 325
Query: 372 YGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQV 428
Y L+ + R EALNLV EM IKP+ + L+D+ C Q E E+ Q+
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ-CKFEKARELLGQM 384
Query: 429 FE 430
E
Sbjct: 385 LE 386
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 160/368 (43%), Gaps = 59/368 (16%)
Query: 60 LYSRILHYYSSLADLNYATRLF---HHFG-KPNSFMWNTLIRAYARSANHKHQAIELYKA 115
+Y+ I+ +NYA LF ++G +P+ M+ +L+ S + A L +
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR-DADSLLRG 237
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M + ++ PD TF ++ A + ++++ +++++ + SLI+ +
Sbjct: 238 MT---KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 176 CGCLDMALKIFQNMSEKS----EVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTM 231
GC+D A ++F M K V++ +++ + + + D A+K+F EM
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM----------- 343
Query: 232 QSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFER 291
K + + + T L+ + + G +AQ+VF
Sbjct: 344 --------------------------SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 292 MPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVK--IEKFVPNSITFVGVLSACNH 345
M R ++ ++N ++ +GK + AL F M K ++ PN T+ +L +
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAV 402
G + + LM F+ M K ++ + Y ++ +AG+++ A+NL +P +KP+ V
Sbjct: 438 NGKLEKALMVFEDMRKR-EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 403 IWRSLLDA 410
+ +++
Sbjct: 497 TYTTMISG 504
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 151/350 (43%), Gaps = 56/350 (16%)
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N L+ + +S+ + L K M L E PD TF ++ + E +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFE----PDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS---------------------- 190
Q++++G + D + ++I G ++ AL +F M
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 191 -----------------EKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQ 232
+ +++N ++D++V+ G+F A +++ EM+++ P+ +T
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 233 SVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM 292
S+I+ G + Y+M+ K DV+ T L++ +CKC ++ A ++F M
Sbjct: 287 SLINGFCMEGCVDEARQMF-YLMET--KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 293 PYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSAC-NHRG 347
+ + ++ ++I GF GK A + F MV + VP +I VL C + G
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV--SRGVPPNIRTYNVLLHCLCYNG 401
Query: 348 MVNEGLMYF-DMMTKEYN-VEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
V + LM F DM +E + V P + Y L+ G++++AL + +M
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 14/286 (4%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KP+ +N LI A+ + A ELY M+ M + P+ +T+ ++ +
Sbjct: 244 KPDVITFNALIDAFVKEGKF-LDAEELYNEMIRM---SIAPNIFTYTSLINGFCMEGCVD 299
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMV 201
E +Q+ + G D SLI+ + C +D A+KIF MS+K + +++ ++
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 202 DSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGL-GALSLGMWAHAYVMKKCDK 260
+ + G+ + A +VF M+ P +V+ C G + + + K+
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNSWNSIIL----GFSMHGKAEAA 316
VA ++ L+ C G LE A VFE M R+++ G GK + A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 317 LDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKE 362
++ F + + PN +T+ ++S G+ +E + F M ++
Sbjct: 480 VNLFCSLPS-KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 18/242 (7%)
Query: 198 NVMVDSYVRAGEFDTALKVFGEMLKL-HDPDGYTMQSVISA-CAGLGALSLGMWAHAYVM 255
N++++ + ++ + A G+M+KL +PD T S+I+ C G + A + V
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG----NRMEEAMSMVN 166
Query: 256 KKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP----YRDVNSWNSIILGFSMHG 311
+ + + DV++ T ++D CK G + A +F++M DV + S++ G G
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 312 KAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEH 371
+ A D R + K P+ ITF ++ A G + ++ M + ++ P +
Sbjct: 227 RWRDA-DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR-MSIAPNIFT 284
Query: 372 YGCLVDLFARAGRIQEALNLVSEMPIK---PDAVIWRSLLDACC---KQDASVELGEEMA 425
Y L++ F G + EA + M K PD V + SL++ C K D ++++ EM+
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 426 KQ 427
++
Sbjct: 345 QK 346
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 177/400 (44%), Gaps = 30/400 (7%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHF----GKPNSFMWNTLIRAYARSANHKHQAIELY 113
L +Y+ ++ + +L+ LF P + +NTLIR + + K +A E++
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK-EASEIF 305
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
+ M+E V P+ YT+ ++ E Q+ +++ E + N +I+
Sbjct: 306 E---FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 174 ATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLK---LHDP 226
G + A++I + M ++ +++N+++ G+ D A K+ MLK DP
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 227 DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCG----SL 282
D + ++I L + + +++K A D + L++ K G ++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLG---AGDRVTTNILLNSTLKAGDVNKAM 479
Query: 283 EIAQQVFERMPYRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA 342
E+ +Q+ + R+ +++ ++I GF G A +M ++ + P+ + +LS+
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFDYNCLLSS 538
Query: 343 CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV---SEMPIKP 399
G +++ F+ M ++ N P + + ++D +AG I+ A +L+ S + P
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 400 DAVIWRSLLDACCK---QDASVELGEEMAKQVFEIEGSVC 436
D + L++ K D ++ ++M FE + +C
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 56/341 (16%)
Query: 88 NSFMWNTLIRAYARSANHKHQAIELYKAMMLMME---EEVVPDHYTFPFVLKACAHTFSL 144
N + N L++ R+ +E KA+ L+ E ++PD +++ V++
Sbjct: 141 NVYNHNILLKGLCRN-------LECGKAVSLLREMRRNSLMPDVFSYNTVIRG------F 187
Query: 145 CEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSY 204
CEGK++ L L + GC S V+W +++D++
Sbjct: 188 CEGKELEKAL-------------ELANEMKGSGC------------SWSLVTWGILIDAF 222
Query: 205 VRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVA 263
+AG+ D A+ EM + + D S+I G L G V+++ D A
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 264 ADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDY 319
+ NT L+ +CK G L+ A ++FE M R +V ++ +I G GK + AL
Sbjct: 283 --ITYNT-LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 320 FFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLF 379
M++ ++ PN++T+ +++ G+V + + ++M K+ P Y L+
Sbjct: 340 LNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELM-KKRRTRPDNITYNILLGGL 397
Query: 380 ARAGRIQEALNLVSEMP-----IKPDAVIWRSLLDACCKQD 415
G + EA L+ M PD + + +L+ CK++
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 159/358 (44%), Gaps = 29/358 (8%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
+PN+ +N +I + A+E+ + LM + PD+ T+ +L L
Sbjct: 349 EPNAVTYNIIINKLCKDG-LVADAVEIVE---LMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 146 EGKQVHAQLLKLGYESDTRIC--NSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNV 199
E ++ +LK +D + N+LIH L AL I+ + EK V+ N+
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 200 MVDSYVRAGEFDTALKVFGEMLK---LHDPDGYTMQSVISACAGLGALSLGMWAHAYVMK 256
+++S ++AG+ + A++++ ++ + + D YT ++I G L++ A + K
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT--AMIDGFCKTGMLNV---AKGLLCK 519
Query: 257 KCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP----YRDVNSWNSIILGFSMHGK 312
+ V CL+ CK GSL+ A ++FE M + DV S+N +I G G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 313 AEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHY 372
++A M + P+ T+ +++ G ++E + +FD M + EP
Sbjct: 580 IKSAESLLVGMSR-AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV-DSGFEPDAHIC 637
Query: 373 GCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSL----LDACCKQDASVELGEEMAK 426
++ G + LV ++ + D V+ + L +D C A+++L + + +
Sbjct: 638 DSVLKYCISQGETDKLTELVKKL-VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 15/290 (5%)
Query: 42 HAQTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGKPNSFMWNTLIRAYAR 101
H + + ++ P F+ +R+L + S L+ ++F + W +
Sbjct: 108 HELQVHIMKSSIRPTITFI-NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIE 166
Query: 102 SANHKHQAIELYKAMMLMMEEEV--VPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
+++ A L+ +M+ ++ +P + VLKACA GKQVHA KLG+
Sbjct: 167 MGDYEDAAF-LFVSMLKHSQKGAFKIPS-WILGCVLKACAMIRDFELGKQVHALCHKLGF 224
Query: 160 --ESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
E D+ + SLI FY CL+ A + +S + V+W V + R GEF ++ F
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 218 GEMLKLHDPDGYTM-QSVISACAGL--GALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
EM ++ +V+ AC+ + G S G HA +K +D L+ L++
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGGRS-GQQVHANAIK---LGFESDCLIRCRLIE 340
Query: 275 MYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDYFFRM 323
MY K G ++ A++VF+ V+ WN+++ + +G A+ ++M
Sbjct: 341 MYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQM 390
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 171/388 (44%), Gaps = 31/388 (7%)
Query: 61 YSRIL-HYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELYKA 115
Y IL + S + ++ A LF K P+ +N L+ A A+ N I L +
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK-MNKFELVISLGEQ 108
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M + + D YT+ + L V A+++KLGYE D +SL++ Y
Sbjct: 109 MQTL---GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 176 CGCLDMALKIFQNMSE----KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYT 230
+ A+ + M E ++ ++ + A+ + +M++ PD T
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 231 MQSVISACAGLGALSLGMWAHAYVMKKCDKN-VAADVLVNTCLVDMYCKCGSLEIAQQVF 289
+V++ G + L + ++KK +K + ADV++ ++D CK ++ A +F
Sbjct: 226 YGTVVNGLCKRGDIDLAL----SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 290 ERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNH 345
M + DV +++S+I +G+ A M++ K PN +TF ++ A
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVK 340
Query: 346 RGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK---PDAV 402
G + E +D M K +++P + Y L++ F R+ EA ++ M K P+ V
Sbjct: 341 EGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 403 IWRSLLDACCKQ---DASVELGEEMAKQ 427
+ +L+ CK + +EL EM+++
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 168/402 (41%), Gaps = 57/402 (14%)
Query: 86 KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLC 145
KP++F + TLI N +A+ L M+ + PD T+ V+ +
Sbjct: 185 KPDTFTFTTLIHGLFLH-NKASEAVALVDQMV---QRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK------------- 192
+ ++ K E+D I N++I +D AL +F M K
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 193 --------------------------SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-D 225
+ V+++ ++D++V+ G+ A K++ EM+K D
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 226 PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIA 285
PD +T S+I+ L H + + K+ +V+ + L+ +CK +E
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEA--KHMFELM-ISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 286 QQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLS 341
++F M R + ++ ++I GF + A F +MV + PN +T+ +L
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLD 476
Query: 342 ACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK--- 398
G + + ++ F+ + + +EP + Y +++ +AG++++ L + +K
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 399 PDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAY 440
P+ + + +++ C++ S E + + K++ E SG Y
Sbjct: 536 PNVIAYNTMISGFCRK-GSKEEADSLLKKMKEDGPLPNSGTY 576
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 36/340 (10%)
Query: 74 LNYATRLFHHFGKPNSFMWNTLIRA---YARSANHKHQAIELYKAMMLMMEEEVVPDHYT 130
LN T + + +P+ F +++LI Y R ++ + + M+E ++ P+ T
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS-------RLLSDMIERKINPNVVT 330
Query: 131 FPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS 190
F ++ A L E ++++ +++K + D +SLI+ + LD A +F+ M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 191 EK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSL 246
K + V+++ ++ + +A + +++F EM + + ++ L
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM---------SQRGLVGNTVTYTTLIH 441
Query: 247 GMW-------AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR---- 295
G + A + V ++L L+D CK G L A VFE +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 296 DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMY 355
D+ ++N +I G GK E + F + ++ PN I + ++S +G E
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 356 FDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
M KE P Y L+ R G + + L+ EM
Sbjct: 561 LKKM-KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 154/376 (40%), Gaps = 60/376 (15%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCE 146
P + + +LI Y R N + Y+ ++ M + +V YT+ V+K + L
Sbjct: 380 PQAQAYASLIEGYCREKNVRQG----YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 147 GKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVS----WNVMVD 202
+ +++ G + I +LI + A+++ + M E+ +N ++
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 203 SYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHA--YVMKKCD 259
+A D A EM++ P+ +T + IS G + +A A YV + +
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS-----GYIEASEFASADKYVKEMRE 550
Query: 260 KNVAADVLVNTCLVDMYCKCGSL-----------------------------------EI 284
V + ++ T L++ YCK G + +
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 285 AQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVL 340
A+++F M + DV S+ +I GFS G + A F MV+ E PN I + +L
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLL 669
Query: 341 SACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIK-- 398
G + + D M+ + + P Y ++D + ++G + EA L EM +K
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 399 -PDAVIWRSLLDACCK 413
PD+ ++ +L+D CC+
Sbjct: 729 VPDSFVYTTLVDGCCR 744
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 138/309 (44%), Gaps = 37/309 (11%)
Query: 58 LFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYARSANHKHQAIELY 113
+ +Y+ +L + ++ A L PN+ + T+I Y +S + +A L+
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL-AEAFRLF 720
Query: 114 KAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFY 173
M L + +VPD + + ++ C + + K G S T N+LI++
Sbjct: 721 DEMKL---KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776
Query: 174 ATCGCLDMALKI--------FQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD 225
G ++ ++ F + ++V++N+M+D + G + A ++F +M
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM----- 831
Query: 226 PDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAA----DVLVNTCLVDMYCKCG- 280
+ M +VI+ + L M A + D+ +AA D ++ + +++ + K G
Sbjct: 832 QNANLMPTVITYTSLLNGYD-KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 281 ---SLEIAQQVFERMPYRD-----VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
+L + Q+F + D +++ +++ GF+ G+ E A MV+++ ++P+
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ-YIPD 949
Query: 333 SITFVGVLS 341
S T + +++
Sbjct: 950 SATVIELIN 958
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 58/292 (19%)
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE----VSWNVMVDSYVRAG 208
Q+ +LGYE + +LI +A G +D AL + M S V +NV +DS+ + G
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 209 EFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLV 268
+ D A K F E+ + +G + D +
Sbjct: 253 KVDMAWKFFHEI----EANG---------------------------------LKPDEVT 275
Query: 269 NTCLVDMYCKCGSLEIAQQVFE------RMPYRDVNSWNSIILGFSMHGKAEAALDYFFR 322
T ++ + CK L+ A ++FE R+P ++N++I+G+ GK + A R
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC--TYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 323 MVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARA 382
+ + +P+ I + +L+ G V+E L F+ M K+ P L Y L+D+ RA
Sbjct: 334 Q-RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYNILIDMLCRA 390
Query: 383 GRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQ---DASVELGEEMAKQV 428
G++ A L M + P+ ++D CK D + + EEM +V
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 164/395 (41%), Gaps = 25/395 (6%)
Query: 106 KHQAIELYKAMMLMMEEEV-VPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTR 164
K Q ++ AM M+ +V PD TF ++ + + +V+ ++L +++
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 165 ICNSLIHFYATCGCLDMALKIFQNMSEKSEVS----WNVMVDSYVRAGEFDTALKVFGEM 220
+ SLI + G + KI+++M ++ N +D +AGE + +F E+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 221 -LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKC 279
+ PD + +I G + + Y MK ++ D ++D +CKC
Sbjct: 544 KARRFVPDARSYSILIHGLIKAG-FANETYELFYSMK--EQGCVLDTRAYNIVIDGFCKC 600
Query: 280 GSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSIT 335
G + A Q+ E M + V ++ S+I G + + + A F K ++ N +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY-MLFEEAKSKRIELNVVI 659
Query: 336 FVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEAL---NLV 392
+ ++ G ++E + + + ++ + P L + L+D +A I EAL +
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQK-GLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 393 SEMPIKPDAVIWRSLLDACCKQ---DASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYAS 449
E+ P+ V + L++ CK + + +EM KQ ++ S S Y + A
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ--GMKPSTIS--YTTMISGLAK 774
Query: 450 ASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDGVAH 484
A E G L G C I+G+++
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 161/374 (43%), Gaps = 24/374 (6%)
Query: 74 LNYATRLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPF 133
L+ TR+ H P+ + L+ A+ N I L++ M ++ + P T
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAK-MNRYDVVISLFEQMQIL---GIPPLLCTCNI 123
Query: 134 VLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNM---- 189
V+ + C +++KLG+E D SL++ Y ++ A+ +F +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 190 SEKSEVSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGM 248
+ + V++ ++ + + A+++F +M P+ T ++++ +G
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERM----PYRDVNSWNSII 304
W +MK + + +V+ T L+D + K G L A++++ M Y DV ++ S+I
Sbjct: 244 WLLRDMMK---RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 305 LGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYN 364
G M+G + A F+ M + PN + + ++ V +G+ F M+++
Sbjct: 301 NGLCMYGLLDEARQMFYLMER-NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 365 VEPRLEHYGCLVDLFARAGR---IQEALNLVSEMPIKPDAVIWRSLLDACC---KQDASV 418
V + Y L+ + GR QE N +S PD + LLD C K + ++
Sbjct: 360 VANTIT-YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 419 ELGEEMAKQVFEIE 432
+ E M K+ +I
Sbjct: 419 MIFEYMRKREMDIN 432
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 126/303 (41%), Gaps = 23/303 (7%)
Query: 74 LNYATRLFHHFG----KPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHY 129
LN+A LF+ G +PN +N L+ A L MM+ + P+
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD----MMKRRIEPNVI 259
Query: 130 TFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIF--- 186
TF ++ A L E K+++ ++++ D SLI+ G LD A ++F
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 187 -QNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALS 245
+N +EV + ++ + ++ + +K+F EM G ++ G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM----SQKGVVANTITYTVLIQGYCL 375
Query: 246 LGM--WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR--DVN--S 299
+G A + + D+ L+D C G +E A +FE M R D+N +
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMM 359
+ II G GK E A D F + + PN IT+ ++S RG+++E F M
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFS-KGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 360 TKE 362
++
Sbjct: 495 KED 497
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 17/307 (5%)
Query: 119 MMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGC 178
MM+ PD TF +L H + + + Q+L +G++ + +LI
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 179 LDMALKIFQNM----SEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQS 233
L+ A+++F M S + V++N +V G + A + +M+K +P+ T +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 234 VISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMP 293
+I A +G L M A +V DV L++ C G L+ A+Q+F M
Sbjct: 264 LIDAFVKVGKL---MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 294 ----YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMV 349
Y + + ++I GF + E + F+ M + + V N+IT+ ++ G
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ-KGVVANTITYTVLIQGYCLVGRP 379
Query: 350 NEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRS 406
+ F+ M+ P + Y L+D G++++AL + M + + V +
Sbjct: 380 DVAQEVFNQMSSR-RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 407 LLDACCK 413
++ CK
Sbjct: 439 IIQGMCK 445
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 150/364 (41%), Gaps = 28/364 (7%)
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
+ S +I + +H LD+ ++ + S + + ++ + +D + +F
Sbjct: 47 AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106
Query: 218 GEMLKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
+M L P +++ C L S A ++ K D++ T L++ YC
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLS--SQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 278 KCGSLEIAQQVFER---MPYR-DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
+E A +F++ M ++ +V ++ ++I + A++ F +M PN
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM-GTNGSRPNV 223
Query: 334 ITFVGVLSA-CNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA---L 389
+T+ +++ C + + DMM + +EP + + L+D F + G++ EA
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRR--IEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 390 NLVSEMPIKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKL--- 446
N++ +M + PD + SL++ C L +E + + +E + C V+ + L
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYG----LLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 447 YASASRWNEVGLLRKLMSDKGVTKKPGCSLIEIDG--------VAHEFFAGDTTHPKSED 498
+ + R + + MS KGV + I G VA E F ++ D
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 499 IYKF 502
I +
Sbjct: 398 IRTY 401
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 26/290 (8%)
Query: 143 SLCEGKQVH------AQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK---- 192
SLC+ + V ++ G + NSLI+ G A ++ NM EK
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 193 SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAH 251
+ V++N ++D++ + G+ A K+ EM++ DPD T +I+ L
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 252 AY-VMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILG 306
+ V K C N+ NT L++ +CKC +E ++F M R + ++ +II G
Sbjct: 387 KFMVSKDCLPNIQT---YNT-LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 307 FSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVL--SACNHRGMVNEGLMYFDMMTKEYN 364
F G ++A F +MV VP I +L C++ G ++ L+ F + K
Sbjct: 443 FFQAGDCDSAQMVFKQMV--SNRVPTDIMTYSILLHGLCSY-GKLDTALVIFKYLQKS-E 498
Query: 365 VEPRLEHYGCLVDLFARAGRIQEALNLVSEMPIKPDAVIWRSLLDACCKQ 414
+E + Y +++ +AG++ EA +L + IKPD V + +++ C +
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSK 548
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 159/383 (41%), Gaps = 58/383 (15%)
Query: 61 YSRIL-HYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELYKA 115
Y IL + S + ++ A LF K P+ +N L+ A A+ N I L +
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK-MNKFELVISLGEQ 108
Query: 116 MMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYAT 175
M + + D YT+ + L V A+++KLGYE D +SL++ Y
Sbjct: 109 MQTL---GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 176 CGCLDMALKIFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVI 235
+ A+ +VD V G + PD +T ++I
Sbjct: 166 SKRISDAV---------------ALVDQMVEMG---------------YKPDTFTFTTLI 195
Query: 236 SACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR 295
GL + A A V + + D++ +V+ CK G +++A + +M
Sbjct: 196 H---GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 296 DVNS----WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA-CNHRGMVN 350
+ + +N+II + E A+D F M + + PN +T+ +++ CN+ +
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 351 EGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSL 407
+ +M+ K+ N P + + L+D F + G++ EA L EM I PD + + L
Sbjct: 312 ASRLLSNMLEKKIN--PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 408 LDACCKQDASVELGEEMAKQVFE 430
++ C + E AKQ+F+
Sbjct: 370 INGFCMHNRLDE-----AKQMFK 387
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 124/263 (47%), Gaps = 16/263 (6%)
Query: 87 PNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKA-CAHTFSLC 145
PN +N LI A+ + + +E K M++ + PD T+ ++ C H L
Sbjct: 326 PNVVTFNALIDAFFKEG----KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN-RLD 380
Query: 146 EGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMV 201
E KQ+ ++ + + N+LI+ + C ++ +++F+ MS++ + V++ ++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 202 DSYVRAGEFDTALKVFGEMLKLHDP-DGYTMQSVISACAGLGALSLGMWAHAYVMKKCDK 260
+ +AG+ D+A VF +M+ P D T ++ G L + Y+ K
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK---S 497
Query: 261 NVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR-DVNSWNSIILGFSMHGKAEAALDY 319
+ ++ + +++ CK G + A +F + + DV ++N++I G + A D
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA-DD 556
Query: 320 FFRMVKIEKFVPNSITFVGVLSA 342
FR +K + +PNS T+ ++ A
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRA 579
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 162/407 (39%), Gaps = 64/407 (15%)
Query: 61 YSRILHYYSSLADLNYATRL---FHHFGKP-NSFMWNTLIRAYARSANHKHQAIELYKAM 116
+S++L + + + L + G P N + ++ LI + R + L K M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIH----- 171
L E P+ T +L H+ + E + Q+ GY+ +T N+LIH
Sbjct: 144 KLGYE----PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 172 ----------------------------FYATC--GCLDMALKIFQNMS----EKSEVSW 197
C G D+A + M E + +
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 198 NVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHA--YV 254
N ++D + D AL +F EM K P+ T S+IS + G W+ A +
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-----NYGRWSDASRLL 314
Query: 255 MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMH 310
++ + DV + L+D + K G L A+++++ M R ++ +++S+I GF MH
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLE 370
+ + A F MV F P+ +T+ ++ V EG+ F M++ V +
Sbjct: 375 DRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 371 HYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQ 414
Y L+ +AG A + EM + P+ + + +LLD CK
Sbjct: 434 -YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 129/278 (46%), Gaps = 15/278 (5%)
Query: 196 SWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYV 254
+++ ++D++V+ G+ A K++ EM+K DP T S+I+ L ++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 255 MKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMH 310
+ K + DV+ L+ +CK +E +VF M R + ++N +I G
Sbjct: 388 VSK---HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 311 GKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLE 370
G + A + F MV + PN +T+ +L G + + ++ F+ + + +EP +
Sbjct: 445 GDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIY 502
Query: 371 HYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQ 427
Y +++ +AG++++ +L + +KPD V + +++ C++ S E + + K+
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK-GSKEEADALFKE 561
Query: 428 VFEIEGSVCSGAY-VLLSKLYASASRWNEVGLLRKLMS 464
+ E SG Y L+ R L++++ S
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 147/340 (43%), Gaps = 19/340 (5%)
Query: 102 SANHKHQAIELYKAMMLMMEEEVVP-DHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYE 160
SA K ++ ++ M+ +P +HYT+ ++ L V +++KLGYE
Sbjct: 89 SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE 148
Query: 161 SDTRICNSLIHFYATCGCLDMALKIFQNM----SEKSEVSWNVMVDSYVRAGEFDTALKV 216
+ +SL++ Y + A+ + M + + V++N ++ + A+ +
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 217 FGEML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDM 275
M+ K PD T V++ G L A + K + VL+ ++D
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL---AFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 276 YCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVP 331
CK ++ A +F+ M + +V +++S+I +G+ A M++ K P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINP 324
Query: 332 NSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNL 391
+ TF ++ A G + E +D M K +++P + Y L++ F R+ EA +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 392 VSEMPIK---PDAVIWRSLLDACCKQDASVELGEEMAKQV 428
M K PD V + +L+ CK VE G E+ +++
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKY-KRVEEGMEVFREM 422
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 147/361 (40%), Gaps = 40/361 (11%)
Query: 57 ALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRA---YARSANHKHQA 109
+ +Y+ I+ ++ A LF +PN +++LI Y R ++
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS--- 311
Query: 110 IELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSL 169
+ + M+E ++ PD +TF ++ A L E ++++ +++K + +SL
Sbjct: 312 ----RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 170 IHFYATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD 225
I+ + LD A ++F+ M K V++N ++ + + + ++VF EM
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM----- 422
Query: 226 PDGYTMQSVISACAGLGALSLGMW-------AHAYVMKKCDKNVAADVLVNTCLVDMYCK 278
+ + ++ L G++ A + V +++ L+D CK
Sbjct: 423 ----SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 279 CGSLEIAQQVFERMPYRD----VNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSI 334
G LE A VFE + + ++N +I G GK E D F + ++ P+ +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVV 537
Query: 335 TFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSE 394
+ ++S +G E F M KE P Y L+ R G + + L+ E
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEM-KEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Query: 395 M 395
M
Sbjct: 597 M 597
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 193/486 (39%), Gaps = 102/486 (20%)
Query: 61 YSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYARSANHKHQAIELYKAM 116
Y+ IL S L+ L K PN +N L+ Y + + K E ++ +
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK----EAFQIV 298
Query: 117 MLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATC 176
LM + V+PD T+ ++ + S+ EG ++ + L + D N+LI
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID----- 353
Query: 177 GCLDMAL-----KIFQNMS---------------------EKSE---------------- 194
GC ++ L K+ + M EK E
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 195 ---VSWNVMVDSYVRAGEFDTALKVFGEM-LKLHDPDGYTMQSVISAC------------ 238
V+++ ++ +Y++ G+ AL++ EM K + T+ +++ A
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 239 -------------AGLGALSLGMWAHAYVMKKCD-----KNVAADVLVNT--CLVDMYCK 278
G L +G + V K + K V V+T L+ C
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 279 CGSLEIAQQVFERMP----YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSI 334
G E+A + F+ + D +++NSIILG+ G+ E A +++ +K F P++
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK-HSFKPDNY 592
Query: 335 TFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSE 394
T +L+ GM + L +F+ + +E V+ Y ++ F + +++EA +L+SE
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV--TYNTMISAFCKDKKLKEAYDLLSE 650
Query: 395 MP---IKPDAVIWRSLLDACCKQDASVELGEEMAKQVFEIEGSVCSGAYVLLSKLYASAS 451
M ++PD + S + + +D + +E+ K+ GS+ V K A++
Sbjct: 651 MEEKGLEPDRFTYNSFI-SLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSE 709
Query: 452 RWNEVG 457
E+
Sbjct: 710 SKEELN 715
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 147/379 (38%), Gaps = 86/379 (22%)
Query: 118 LMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCG 177
++ E +V PD+ T+ +LKA + L + K++ + K G + N+L++ Y G
Sbjct: 230 MVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 178 CLDMALKIFQNMSEKSEV----SWNVMVDSYVRAGEFDTALKVFGEM--LKLHDPDGYTM 231
L A +I + M + + + ++N++++ AG L++ M LKL PD T
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ-PDVVTY 348
Query: 232 QSVISACAGLGALSL------------GMWAHAY-----------------VMKKCDKNV 262
++I C LG LSL G+ A+ V +K + V
Sbjct: 349 NTLIDGCFELG-LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Query: 263 -----AADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN------------------- 298
+ D++ L+ Y K G L A ++ M + +
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 299 --------------------SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVG 338
++ ++I+GF K E AL+ + M K+ K P TF
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV-KITPTVSTFNS 526
Query: 339 VLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEM--- 395
++ H G + FD + E + P + ++ + + GR+++A +E
Sbjct: 527 LIGGLCHHGKTELAMEKFDELA-ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 396 PIKPDAVIWRSLLDACCKQ 414
KPD LL+ CK+
Sbjct: 586 SFKPDNYTCNILLNGLCKE 604
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 148/392 (37%), Gaps = 80/392 (20%)
Query: 69 SSLADLNYATRLFH---HFGKPNS-FMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEV 124
+S A L+ L H H P S +++ + AY H A+++++ M+ + +
Sbjct: 107 TSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEG-KPHVALQIFQKMIRLKLKPN 165
Query: 125 VPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALK 184
+ T L +FS+ ++V ++K+G + + N L++ Y G L+ AL
Sbjct: 166 LLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 185 IFQNMSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGAL 244
+ + M EF +PD T +++ A + G L
Sbjct: 226 MLERM-----------------VSEFKV------------NPDNVTYNTILKAMSKKGRL 256
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSW 300
S + MKK + + + LV YCK GSL+ A Q+ E M D+ ++
Sbjct: 257 S-DLKELLLDMKK--NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
N +I G G L+ M + K P+ +T+ ++ C G+ E + M
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 361 KE-----------------------------------YNVEPRLEHYGCLVDLFARAGRI 385
+ + P + Y L+ + + G +
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 386 QEALNLVSEM---PIKPDAVIWRSLLDACCKQ 414
AL ++ EM IK + + ++LDA CK+
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKE 464
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 16/272 (5%)
Query: 167 NSLIHFYATCGCLDMALKIFQNMSEKSEV----SWNVMVDSYVRAGEFDTALK-VFGEML 221
N ++ G ++ A +F MS + V S+ +MV R G+ A + + G +
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 222 KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGS 281
+ PD T +++A G ++ +W Y K D +++ T L+D CK GS
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIW---YFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 282 LEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFV 337
++ A ++ E M +V + ++I G G E A F ++V+ + + PN T+
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 338 GVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAG---RIQEALNLVSE 394
++ +N M F M KE + P + Y L++ +AG R E +NL+ +
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRM-KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Query: 395 MPIKPDAVIWRSLLDACCKQDASVELGEEMAK 426
P+ + + +D+ CK+ + E E + K
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 250 AHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIIL 305
A VM ++ + + C++++ + G +E A+ VF+ M R D +S+ +++
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 306 GFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNV 365
G GK + A + M++ F+P++ T +L+A G+VN + YF M +
Sbjct: 226 GCFRDGKIQEADRWLTGMIQ-RGFIPDNATCTLILTALCENGLVNRAIWYFRKMI-DLGF 283
Query: 366 EPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACCKQ 414
+P L ++ L+D + G I++A ++ EM KP+ +L+D CK+
Sbjct: 284 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 139/351 (39%), Gaps = 55/351 (15%)
Query: 46 LRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFGK----PNSFMWNTLIRAYAR 101
L+ + + + + Y+ ++ Y LN A LF + PN + TLI + +
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 102 SANHKHQAIELYKAMMLMMEEEVVPDHYT------------------------FPFVLKA 137
+ + Y+ M LM +E +P+ YT F L+A
Sbjct: 406 AGSFGRA----YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 138 CAHTFSL-----CEGKQVHAQLL------KLGYESDTRICNSLIHFYATCGCLDMALKIF 186
T+++ C+ ++ L K G+E+D R+ N LI + + + ++F
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 187 QNMSE----KSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHD--PDGYTMQSVISACAG 240
Q + ++ ++ M+ Y + G+ D ALK F M K H PD +T S+IS G
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM-KRHGCVPDSFTYGSLIS---G 577
Query: 241 LGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRD-VNS 299
L S+ A D+ ++ + L YCK A + E + + + +
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRT 637
Query: 300 WNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVN 350
+++ K A +F ++++ + + +T +AC+ G N
Sbjct: 638 VRTLVRKLCSEKKVGVAALFFQKLLEKDS-SADRVTLAAFTTACSESGKNN 687
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 170/399 (42%), Gaps = 63/399 (15%)
Query: 80 LFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMME-EEVVPDHYTFPFVLKAC 138
+ H P ++ L A A++ + +L A+ ME + + + YT ++
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQY-----DLVLALCKQMELKGIAHNLYTLSIMINCF 133
Query: 139 AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEKSE---- 194
LC +++KLGYE +T ++LI+ G + AL++ M E
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAY 253
++ N +V+ +G+ A+ + +M++ P+ T V++ G +L M
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM---EL 250
Query: 254 VMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSM 309
+ K ++N+ D + + ++D CK GSL+ A +F M + + ++N +I GF
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 310 HGKAEAALDYFFRMVKIEKFVPNSITFVGVLSA----------------CNHRGMVNEGL 353
G+ + M+K K PN +TF ++ + HRG+ + +
Sbjct: 311 AGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 354 MY---FDMMTKEYNV---------------EPRLEHYGCLVDLFARAGRIQEALNLVSEM 395
Y D KE ++ +P + + L++ + +A RI + L L +M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 396 PIK---PDAVIWRSLLDACCKQDASVELGE-EMAKQVFE 430
++ D V + +L+ C ELG+ +AK++F+
Sbjct: 430 SLRGVVADTVTYNTLIQGFC------ELGKLNVAKELFQ 462
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 22/365 (6%)
Query: 44 QTLRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAY 99
+ LR ++ N YS I+ L+ A LF+ N +N LI +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 100 ARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGY 159
+ A K + M++ ++ P+ TF ++ + L E +++H +++ G
Sbjct: 309 CNAGRWDDGA----KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 160 ESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SEVSWNVMVDSYVRAGEFDTALK 215
DT SLI + LD A ++ M K + ++N++++ Y +A D L+
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 216 VFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVD 274
+F +M L+ D T ++I LG L++ A + + V +++ L+D
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNV---AKELFQEMVSRKVPPNIVTYKILLD 481
Query: 275 MYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFV 330
C G E A ++FE++ D+ +N II G K + A D F + ++
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVK 540
Query: 331 PNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALN 390
P T+ ++ +G ++E + F M ++ + P Y L+ G +++
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA-PDGWTYNILIRAHLGDGDATKSVK 599
Query: 391 LVSEM 395
L+ E+
Sbjct: 600 LIEEL 604
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 162/362 (44%), Gaps = 39/362 (10%)
Query: 79 RLFHHFGKPNSFMWNTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKAC 138
R+ + +P+ +N+++ RS + A++L + M E V D +T+ ++ +
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDT-SLALDLLRKME---ERNVKADVFTYSTIIDSL 238
Query: 139 AHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMSEK----SE 194
+ + ++ G +S NSL+ G + + ++M + +
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 195 VSWNVMVDSYVRAGEFDTALKVFGEML-KLHDP---------DGYTMQSVISACAGLGAL 244
+++NV++D +V+ G+ A +++ EM+ + P DGY MQ+ +S + L
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 245 SLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSW 300
V KC + D++ T L+ YC ++ +VF + R + ++
Sbjct: 359 --------MVRNKC----SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 301 NSIILGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMT 360
+ ++ GF GK + A + F MV +P+ +T+ +L G + + L F+ +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 361 KEYNVEPRLEHYGCLVDLFARAGRIQEALNLVSEMP---IKPDAVIWRSLLDACCKQDAS 417
K ++ + Y +++ + G++++A NL +P +KP+ + + ++ CK+ +
Sbjct: 466 KS-KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 418 VE 419
E
Sbjct: 525 SE 526
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 44/292 (15%)
Query: 129 YTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQN 188
YT ++ C V +++KLGYE DT N+LI G + A+
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV----- 178
Query: 189 MSEKSEVSWNVMVDSYVRAGEFDTALKVFGEMLKLHDPDGYTMQSVISACAGLGALSLGM 248
V+VD V G PD T S+++ G SL
Sbjct: 179 ----------VLVDRMVENG---------------CQPDVVTYNSIVNGICRSGDTSL-- 211
Query: 249 WAHAYVMKKCDKNVAADVLVNTCLVDMYCKCGSLEIAQQVFERMPYRDVNS----WNSII 304
A + K ++NV ADV + ++D C+ G ++ A +F+ M + + S +NS++
Sbjct: 212 -ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 305 LGFSMHGKAEAALDYFFRMVKIEKFVPNSITFVGVLSACNHRGMVNEG-LMYFDMMTKEY 363
G GK MV E VPN ITF +L G + E +Y +M+T+
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-- 327
Query: 364 NVEPRLEHYGCLVDLFARAGRIQEALNLVSEM---PIKPDAVIWRSLLDACC 412
+ P + Y L+D + R+ EA N++ M PD V + SL+ C
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 144/363 (39%), Gaps = 22/363 (6%)
Query: 46 LRTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYAR 101
LR ++ N +F YS I+ ++ A LF K + +N+L+R +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 102 SANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYES 161
+ A+ L M+ E+VP+ TF +L L E +++ +++ G
Sbjct: 276 AGKWNDGALLLKD----MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 162 DTRICNSLIHFYATCGCLDMALKIF----QNMSEKSEVSWNVMVDSYVRAGEFDTALKVF 217
+ N+L+ Y L A + +N V++ ++ Y D +KVF
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 218 GEMLKLH-DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMY 276
+ K + T ++ G + L A + V DV+ L+D
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKL---AEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 277 CKCGSLEIAQQVFERMPYRDVN----SWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPN 332
C G LE A ++FE + ++ + +II G GK E A + F + + PN
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKPN 507
Query: 333 SITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLV 392
+T+ ++S +G ++E + M ++ N P Y L+ R G + + L+
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 393 SEM 395
EM
Sbjct: 567 EEM 569
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 143/331 (43%), Gaps = 21/331 (6%)
Query: 158 GYESDTRICNSLIHFYATCGCLDMALKIFQNMS----EKSEVSWNVMVDSYVRAGEFDTA 213
G E N L++ + +D A ++F+ M + V++N M+ Y +AG+ A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 214 LKVFGEM-LKLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCL 272
++ +M + H+ D T ++I AC G Y + +K + + +
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQAC--YADSDFGSCVALY-QEMDEKGIQVPPHAFSLV 333
Query: 273 VDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFFRMVKIEK 328
+ CK G L VFE M + +V + +I G++ G E A+ RM+ E
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID-EG 392
Query: 329 FVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEA 388
F P+ +T+ V++ G V E L YF + + Y L+D +AGR+ EA
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 389 LNLVSEMPIKP---DAVIWRSLLDACCKQDASVELGEEMAKQVFEIEG--SVCSGAYVLL 443
L EM K D+ + +L+DA K V+ + K++ E EG +LL
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKH-RKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 444 SKLYASASRWNEVGLLRKLMSDKGVTKKPGC 474
S ++ R E L +M DKG+T C
Sbjct: 511 SGMFKE-HRNEEALKLWDMMIDKGITPTAAC 540
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 162/380 (42%), Gaps = 27/380 (7%)
Query: 47 RTIDTTNHPQALFLYSRILHYYSSLADLNYATRLFHHFG----KPNSFMWNTLIRAYARS 102
R + L+ Y+ +++ S ++ A R+F KP+ +NT+I+ Y +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK- 269
Query: 103 ANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHAQLLKLGYESD 162
A +A+E + M E D T+ +++AC ++ ++ + G +
Sbjct: 270 AGQTQKAMEKLRDMETRGHE---ADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 163 TRICNSLIHFYATCGCLDMALKIFQNM----SEKSEVSWNVMVDSYVRAGEFDTALKVFG 218
+ +I G L+ +F+NM S+ + + V++D Y ++G + A+++
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 219 EML-KLHDPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAADVLVNTCLVDMYC 277
M+ + PD T V++ G + + Y +A + + + L+D
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL---DYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 278 KCGSLEIAQQVFERMP----YRDVNSWNSIILGFSMHGKAEAALDYFFRMVKIEKFVPNS 333
K G ++ A+++FE M RD +N++I F+ H K + A+ F RM + E
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 334 ITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFARAGRIQEALNLVS 393
T+ +LS E L +DMM + + P + L +G++ A ++
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMI-DKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 394 EMPIKPDAVIWRSLLDACCK 413
E+ P VI LDA C+
Sbjct: 563 ELA--PMGVI----LDAACE 576
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 135/314 (42%), Gaps = 22/314 (7%)
Query: 93 NTLIRAYARSANHKHQAIELYKAMMLMMEEEVVPDHYTFPFVLKACAHTFSLCEGKQVHA 152
N LI+++ + EL M E + P YT+ F++ + ++V
Sbjct: 191 NALIKSFGKLG----MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 153 QLLKLGYESDTRICNSLIHFYATCGCLDMALKIFQNMS----EKSEVSWNVMVDSYVRAG 208
+ + D N++I Y G A++ ++M E ++++ M+ +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 209 EFDTALKVFGEMLKLH---DPDGYTMQSVISACAGLGALSLGMWAHAYVMKKCDKNVAAD 265
+F + + ++ EM + P +++ VI G L+ G +++K K +
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFENMIRKGSK---PN 361
Query: 266 VLVNTCLVDMYCKCGSLEIAQQVFERMPYR----DVNSWNSIILGFSMHGKAEAALDYFF 321
V + T L+D Y K GS+E A ++ RM DV +++ ++ G +G+ E ALDY F
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY-F 420
Query: 322 RMVKIEKFVPNSITFVGVLSACNHRGMVNEGLMYFDMMTKEYNVEPRLEHYGCLVDLFAR 381
+ + NS+ + ++ G V+E F+ M+ E Y L+D F +
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCTRDSYCYNALIDAFTK 479
Query: 382 AGRIQEALNLVSEM 395
++ EA+ L M
Sbjct: 480 HRKVDEAIALFKRM 493