Miyakogusa Predicted Gene

Lj1g3v0579450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0579450.1 tr|B9HMA1|B9HMA1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1085726 PE=4
SV=1,76.81,8e-19,CALCIUM-BINDING PROTEIN 39-RELATED,Mo25-like;
Mo25,Mo25-like; seg,NULL; ARM repeat,Armadillo-type
fo,NODE_33875_length_1349_cov_36.931061.path1.1
         (69 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18940.1 | Symbols:  | Mo25 family protein | chr5:6325972-632...    81   2e-16
AT5G18940.2 | Symbols:  | Mo25 family protein | chr5:6325972-632...    78   2e-15
AT2G03410.1 | Symbols:  | Mo25 family protein | chr2:1033907-103...    57   2e-09
AT4G17270.1 | Symbols:  | Mo25 family protein | chr4:9676406-967...    56   6e-09
AT5G47540.1 | Symbols:  | Mo25 family protein | chr5:19283265-19...    54   2e-08

>AT5G18940.1 | Symbols:  | Mo25 family protein |
           chr5:6325972-6328097 FORWARD LENGTH=345
          Length = 345

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 46/69 (66%)

Query: 1   MKHYILEVYHLKFIMTLLRDSSKNIQLSAFHIFKVFVANPNKPQXXXXXXXXXXXXXXXX 60
           MK +ILEV +LK IMTLL+DSSKNIQ+SAFHIFK+FVANPNKPQ                
Sbjct: 249 MKKFILEVRYLKVIMTLLKDSSKNIQISAFHIFKIFVANPNKPQEVKIILARNHEKLLEL 308

Query: 61  XXXXSPGKG 69
               SPGKG
Sbjct: 309 LHDLSPGKG 317


>AT5G18940.2 | Symbols:  | Mo25 family protein |
           chr5:6325972-6328097 FORWARD LENGTH=343
          Length = 343

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/44 (81%), Positives = 41/44 (93%)

Query: 1   MKHYILEVYHLKFIMTLLRDSSKNIQLSAFHIFKVFVANPNKPQ 44
           MK +ILEV +LK IMTLL+DSSKNIQ+SAFHIFK+FVANPNKPQ
Sbjct: 249 MKKFILEVRYLKVIMTLLKDSSKNIQISAFHIFKIFVANPNKPQ 292


>AT2G03410.1 | Symbols:  | Mo25 family protein |
           chr2:1033907-1034953 FORWARD LENGTH=348
          Length = 348

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 34/44 (77%)

Query: 1   MKHYILEVYHLKFIMTLLRDSSKNIQLSAFHIFKVFVANPNKPQ 44
           M  Y+  + +L+ +M LLR+ +KNIQL AFHIFK+FVAN NKP+
Sbjct: 252 MVKYVSSLDNLRIMMNLLREPTKNIQLEAFHIFKLFVANENKPE 295


>AT4G17270.1 | Symbols:  | Mo25 family protein |
           chr4:9676406-9678568 FORWARD LENGTH=343
          Length = 343

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 33/43 (76%)

Query: 1   MKHYILEVYHLKFIMTLLRDSSKNIQLSAFHIFKVFVANPNKP 43
           M  Y+  + +L+ +M LLR+SSK IQ+ AFH+FK+FVAN NKP
Sbjct: 251 MTKYVSSMDNLRILMNLLRESSKTIQIEAFHVFKLFVANQNKP 293


>AT5G47540.1 | Symbols:  | Mo25 family protein |
           chr5:19283265-19285328 REVERSE LENGTH=343
          Length = 343

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 32/43 (74%)

Query: 1   MKHYILEVYHLKFIMTLLRDSSKNIQLSAFHIFKVFVANPNKP 43
           M  Y+    +L+ +M LLR+SSK+IQ+ AFH+FK+F AN NKP
Sbjct: 251 MTKYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKP 293