Miyakogusa Predicted Gene

Lj1g3v0579380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0579380.1 tr|G7ZYL0|G7ZYL0_MEDTR Beta-glucan-binding
protein OS=Medicago truncatula GN=MTR_074s0021 PE=4
SV=1,85,0.00000000000002,Glyco_hydro_81,Glycoside hydrolase, family
81; FAMILY NOT NAMED,NULL,NODE_121571_length_139_cov_7.769784.path3.1
         (58 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15870.1 | Symbols:  | glycosyl hydrolase family 81 protein |...    76   4e-15
AT1G18310.1 | Symbols:  | glycosyl hydrolase family 81 protein |...    71   2e-13

>AT5G15870.1 | Symbols:  | glycosyl hydrolase family 81 protein |
           chr5:5182641-5184878 REVERSE LENGTH=745
          Length = 745

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/40 (80%), Positives = 36/40 (90%)

Query: 19  LPKKGSTDTGADFGFGLYNDHHYHLGYFVYGIAVLARIDP 58
           + K GS D+GADFGFG+YNDHHYHLGYFVY IAVLA+IDP
Sbjct: 444 ITKLGSRDSGADFGFGIYNDHHYHLGYFVYAIAVLAKIDP 483


>AT1G18310.1 | Symbols:  | glycosyl hydrolase family 81 protein |
           chr1:6301200-6303956 REVERSE LENGTH=649
          Length = 649

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/40 (70%), Positives = 35/40 (87%)

Query: 19  LPKKGSTDTGADFGFGLYNDHHYHLGYFVYGIAVLARIDP 58
           + K+GS D+ ADFGFG+YNDHHYH+GYF+Y IAVLA+ DP
Sbjct: 393 ITKQGSKDSQADFGFGIYNDHHYHIGYFLYAIAVLAKFDP 432