Miyakogusa Predicted Gene

Lj1g3v0536740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0536740.1 tr|G7JGQ4|G7JGQ4_MEDTR Eukaryotic translation
initiation factor 5A-1 OS=Medicago truncatula
GN=MTR_4,42.97,8e-17,IF5A_HYPUSINE,Translation elongation factor,
IF5A, hypusine site; Translation proteins SH3-like doma,CUFF.26001.1
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69410.1 | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongatio...   292   5e-80
AT1G13950.1 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A | eukar...   291   2e-79
AT1G26630.1 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic tr...   267   2e-72
AT1G26630.2 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic tr...   222   1e-58

>AT1G69410.1 | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation
           factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158
          Length = 158

 Score =  292 bits (748), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 138/159 (86%), Positives = 154/159 (96%), Gaps = 1/159 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDGF+SLLT+NG+TKDDLKLPTD
Sbjct: 60  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 119

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIGPK 159
           EALL+Q+K+GF EGKD+V+SVMSAMGEEQ+CALK++GPK
Sbjct: 120 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158


>AT1G13950.1 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A |
           eukaryotic elongation factor 5A-1 | chr1:4773631-4774668
           FORWARD LENGTH=158
          Length = 158

 Score =  291 bits (744), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 140/159 (88%), Positives = 151/159 (94%), Gaps = 1/159 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFES +DAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDI+EDG++SLLT+NG+TKDDLKLP D
Sbjct: 60  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 119

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIGPK 159
           + LL QIK GF +GKDLV+SVMSAMGEEQI ALKDIGPK
Sbjct: 120 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158


>AT1G26630.1 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic
           translation initiation factor 5A-1 (eIF-5A 1) protein |
           chr1:9205968-9207098 FORWARD LENGTH=159
          Length = 159

 Score =  267 bits (683), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 126/157 (80%), Positives = 145/157 (92%), Gaps = 1/157 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFTAKKLEDIVPSSHNCDVPHVNR DYQLIDI EDGF+SLLT++G TKDDLKLPTD
Sbjct: 60  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 119

Query: 121 EALLSQIKDGFAEGKDLVLSVMSAMGEEQICALKDIG 157
           + L +Q++ GF EGKD+V+SVMS+MGEEQICA+K++G
Sbjct: 120 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156


>AT1G26630.2 | Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic
           translation initiation factor 5A-1 (eIF-5A 1) protein |
           chr1:9205968-9207013 FORWARD LENGTH=138
          Length = 138

 Score =  222 bits (565), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 105/127 (82%), Positives = 117/127 (92%), Gaps = 1/127 (0%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 59

Query: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTD 120
           VAIDIFTAKKLEDIVPSSHNCDVPHVNR DYQLIDI EDGF+SLLT++G TKDDLKLPTD
Sbjct: 60  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 119

Query: 121 EALLSQI 127
           + L +Q+
Sbjct: 120 DGLTAQL 126