Miyakogusa Predicted Gene

Lj1g3v0526570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0526570.1 Non Chatacterized Hit- tr|F6GT55|F6GT55_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.01,2e-17,seg,NULL,CUFF.25953.1
         (525 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07740.1 | Symbols:  | actin binding | chr5:2459076-2466580 R...   114   2e-25

>AT5G07740.1 | Symbols:  | actin binding | chr5:2459076-2466580
           REVERSE LENGTH=1649
          Length = 1649

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 146/290 (50%), Gaps = 41/290 (14%)

Query: 7   KGEYDSSRIHEDAVDDGSHKEVWKEYSDPHTSQDSVQDDGIHQHVGRADADISMIKDIIV 66
           K + DS  + + A DD   KEVWK   +P+   D   DD  H+H   A+     +KDI V
Sbjct: 383 KRDSDSFVVVDTASDDSEGKEVWKGDVEPNAFLDCASDDSNHKHDMHAETSTDPVKDITV 442

Query: 67  DDVKYKLDPSVDFDSHGVKDITVDDGENKSTQTAATFDMMNTMETKEVTMDRHDELAATQ 126
           DDV+Y+ D   D +   VKDI +DDG+ +  +         T+E KE           TQ
Sbjct: 443 DDVQYRSDGKADSNIDSVKDIGIDDGDEQRKR--------RTVEAKE----NDSSTVQTQ 490

Query: 127 NKFDKDNNATKTELESEEMQLVHDHSRSESDKLLPSAE-KNQLPSNS--SSVGDAVAAKQ 183
           +K D+++N    +LES   +     ++  S+K  P A  + Q+ +N+  ++ GD++  K 
Sbjct: 491 SKGDEESN----DLESMSQKTNTSLNKPISEK--PQATLRKQVGANAKPAAAGDSLKPKS 544

Query: 184 KTKXXXXXXXXXXXXXXXXXXXXXAKLAKPDVAPRWIPSNKGSYQDSLHVSYPPTRHNNS 243
           K +                      ++AKP+   RWIPSNKGSY+DS+HV+YPPTR N++
Sbjct: 545 KQQ---------------ETQGPNVRMAKPNAVSRWIPSNKGSYKDSMHVAYPPTRINSA 589

Query: 244 PAALSNATSANEKMTDAKG---KSASGSHVSRAMVSTDMTSAIMSEVCES 290
           PA+++ +    ++ T   G   K A   ++  ++ S DM S   + +C S
Sbjct: 590 PASITTSLKDGKRATSPDGVIPKDAKTKYLRASVSSPDMRSR--APICSS 637