Miyakogusa Predicted Gene

Lj1g3v0526530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0526530.1 Non Chatacterized Hit- tr|F6H5W2|F6H5W2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,33.33,6e-19,
,gene.g29777.t1.1
         (277 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18670.1 | Symbols: IBS1 | Protein kinase superfamily protein...   250   8e-67
AT1G74330.1 | Symbols:  | Protein kinase superfamily protein | c...   211   5e-55
AT1G74330.2 | Symbols:  | Protein kinase superfamily protein | c...   210   7e-55
AT5G39420.1 | Symbols: cdc2cAt | CDC2C | chr5:15772232-15774929 ...    51   1e-06

>AT1G18670.1 | Symbols: IBS1 | Protein kinase superfamily protein |
           chr1:6427242-6430696 REVERSE LENGTH=709
          Length = 709

 Score =  250 bits (638), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 139/262 (53%), Positives = 179/262 (68%), Gaps = 7/262 (2%)

Query: 21  KKIGGRAR-GNETRKSSRKPLGSNKLLAPAENLASQTQTAQKANGRSFRILKEEKNNIGE 79
           KKI G  R G E+RK +RKP    KL APAE++   +Q  QK NG S     +  + + E
Sbjct: 450 KKISGNGRRGTESRKPTRKPPAFAKL-APAEDVRHHSQKFQKRNGHSVHNSIDSDSTLFE 508

Query: 80  EAQKPSGGKPEDASHMKNASQGDIPFSGPLQVSTSSGFAWAKSRKDDTSIRSHCRTISRG 139
           + QKPS  + ++ASH+KNASQGD+PFSGPLQVS SSGFAWAK RKDD  +RSH R++SRG
Sbjct: 509 KMQKPSNHEKDEASHVKNASQGDVPFSGPLQVSVSSGFAWAKRRKDDICVRSHNRSLSRG 568

Query: 140 HIFNPLEPSTLNSRNYSDIKNQENKESC----GRRTKSRGHDLLENSKPSMQNQWSRFDR 195
           HI N L PS   S N +D+ ++ N++      G RT S+  +  E  K SM  +W + +R
Sbjct: 569 HIPNLLGPSPAFSEN-TDVDSKNNEKEKEEKHGERTDSQDREAYEMLKLSMLKKWRQLER 627

Query: 196 PDSFDASDEYHSQELSMTLYHREDSMSKRSNLSFQDQGEKVEFSGPLLSQMHTVDELLEK 255
           PDSF  SDEYHSQELS+ LY RE+  +K  +L ++D  EK+EFSGPLLS+ + VDELLE+
Sbjct: 628 PDSFGGSDEYHSQELSLELYQREEKAAKLGHLGYEDNDEKIEFSGPLLSKSYGVDELLER 687

Query: 256 HERHIRQTVRRSWFQRVKKHEK 277
           HER IRQ VR+SWFQ+ KK  K
Sbjct: 688 HERQIRQLVRKSWFQKGKKQGK 709


>AT1G74330.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:27943618-27947109 REVERSE LENGTH=699
          Length = 699

 Score =  211 bits (536), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/258 (48%), Positives = 167/258 (64%), Gaps = 7/258 (2%)

Query: 21  KKIGGRAR-GNETRKSSRKPLGSNKLLAPAENLASQTQTAQKANGRSFRILKEEKNNIGE 79
           KKI G  R G + RK SRK    N+L   A ++  QT+T QK  G       E    +  
Sbjct: 439 KKISGNGRRGIDPRKPSRKAHSFNRL---APDVRHQTETFQKRIGHLVHSSIESDARLCG 495

Query: 80  EAQKPSGGKPEDASHMKNASQGDIPFSGPLQVSTSSGFAWAKSRKDDTSIRSHCRTISRG 139
           + Q P   K ++ASH+K+ASQGD+PFSGPLQVS S+ FAWAK  KDD  +R H R++SRG
Sbjct: 496 KLQNPLDHKKDEASHVKHASQGDVPFSGPLQVSKSNSFAWAKREKDDVCVRVHNRSLSRG 555

Query: 140 HIFNPLEPSTLNSRNYSDIKNQENKESCGRRTKSRGHDLLENSKPSMQNQWSRFDRPDSF 199
           +I + L   +      SD++++ NK+    +T SRG +  E  K SM  QW + +RPDSF
Sbjct: 556 YIPS-LSGHSPAFNGKSDVESKINKDEKEDKTDSRGEESYEMVKRSMLKQWRQLERPDSF 614

Query: 200 DASDEYHSQELSMTLYHREDSMSKRSNLSFQDQGEKVEFSGPLLSQMHTVDELLEKHERH 259
            ASDEYHSQELS+ LY R D M+K+   +  D G+K+EFSGPLLSQ + VDELLE+HER+
Sbjct: 615 GASDEYHSQELSLGLYQR-DEMAKKMGNNLGD-GDKIEFSGPLLSQSYGVDELLERHERN 672

Query: 260 IRQTVRRSWFQRVKKHEK 277
           IR+ +R+ WFQ+V+  +K
Sbjct: 673 IRKLIRKPWFQKVQDKQK 690


>AT1G74330.2 | Symbols:  | Protein kinase superfamily protein |
           chr1:27943535-27947109 REVERSE LENGTH=690
          Length = 690

 Score =  210 bits (535), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/258 (48%), Positives = 166/258 (64%), Gaps = 7/258 (2%)

Query: 21  KKIGGRAR-GNETRKSSRKPLGSNKLLAPAENLASQTQTAQKANGRSFRILKEEKNNIGE 79
           KKI G  R G + RK SRK    N+L   A ++  QT+T QK  G       E    +  
Sbjct: 439 KKISGNGRRGIDPRKPSRKAHSFNRL---APDVRHQTETFQKRIGHLVHSSIESDARLCG 495

Query: 80  EAQKPSGGKPEDASHMKNASQGDIPFSGPLQVSTSSGFAWAKSRKDDTSIRSHCRTISRG 139
           + Q P   K ++ASH+K+ASQGD+PFSGPLQVS S+ FAWAK  KDD  +R H R++SRG
Sbjct: 496 KLQNPLDHKKDEASHVKHASQGDVPFSGPLQVSKSNSFAWAKREKDDVCVRVHNRSLSRG 555

Query: 140 HIFNPLEPSTLNSRNYSDIKNQENKESCGRRTKSRGHDLLENSKPSMQNQWSRFDRPDSF 199
           +I + L   +      SD++++ NK+    +T SRG +  E  K SM  QW + +RPDSF
Sbjct: 556 YIPS-LSGHSPAFNGKSDVESKINKDEKEDKTDSRGEESYEMVKRSMLKQWRQLERPDSF 614

Query: 200 DASDEYHSQELSMTLYHREDSMSKRSNLSFQDQGEKVEFSGPLLSQMHTVDELLEKHERH 259
            ASDEYHSQELS+ LY R D M+K+   +  D G+K+EFSGPLLSQ + VDELLE+HER+
Sbjct: 615 GASDEYHSQELSLGLYQR-DEMAKKMGNNLGD-GDKIEFSGPLLSQSYGVDELLERHERN 672

Query: 260 IRQTVRRSWFQRVKKHEK 277
           IR+ +R+ WFQ+ KK  K
Sbjct: 673 IRKLIRKPWFQKDKKQGK 690


>AT5G39420.1 | Symbols: cdc2cAt | CDC2C | chr5:15772232-15774929
           FORWARD LENGTH=644
          Length = 644

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 30/194 (15%)

Query: 89  PEDASHMKNASQGDIPFSGPLQVST--SSGFAWAKSRKDDTSIRSHCRTISRGHIFNPLE 146
           P +AS     + G+      L ++T  +SGFAWA  R+ D         IS    + P  
Sbjct: 465 PNEASRATTTTHGNYYKVSDLPMTTGPASGFAWAVKRRKDPD------NISTLTYYQPSS 518

Query: 147 PSTLNSRNYSDIKN------QENKESCGRRTKSRGHDLLENSKPSMQNQWSRF-DRPDSF 199
            S L+  + +  KN      + + +S      +   D++E   PS +++ SR  +R  S 
Sbjct: 519 KSQLSGTSVAFAKNTFGLNLKPDNDSVWEVQGNNYDDVIEEV-PSHESKLSRIGERHGSL 577

Query: 200 DASDEYHSQELSMTLYHREDSMSKRS--NLSFQDQGEKVEFSGPLLSQMHTVDELLEKHE 257
           D S    SQ        RE+   K++  +L F  Q      SGPL+ +   +DE+L+++E
Sbjct: 578 DGSGLDFSQ--------REEDSPKKTLEHLQFGKQ----SISGPLIFKSGKIDEILQRNE 625

Query: 258 RHIRQTVRRSWFQR 271
            +IRQ VR+S  QR
Sbjct: 626 SNIRQAVRKSHLQR 639